Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79681.t1 | XP_013444773.1 | 95.1 | 223 | 6 | 2 | 2 | 219 | 116 | 338 | 1.40E-80 | 309.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79681.t1 | O04609 | 51.9 | 189 | 72 | 3 | 17 | 198 | 105 | 281 | 1.0e-42 | 174.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79681.t1 | A0A072TPN3 | 95.1 | 223 | 6 | 2 | 2 | 219 | 116 | 338 | 1.0e-80 | 309.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene79681.t1 | TF | WRKY |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene79681 | -0.82677 | 2.26E-54 | -1.69E-46 |
| MS.gene049217 | MS.gene79681 | -0.802583 | 5.24E-49 | -1.69E-46 |
| MS.gene049222 | MS.gene79681 | -0.829997 | 3.76E-55 | -1.69E-46 |
| MS.gene049232 | MS.gene79681 | -0.822639 | 2.13E-53 | -1.69E-46 |
| MS.gene049259 | MS.gene79681 | 0.809833 | 1.56E-50 | -1.69E-46 |
| MS.gene049285 | MS.gene79681 | -0.818524 | 1.87E-52 | -1.69E-46 |
| MS.gene049320 | MS.gene79681 | -0.821137 | 4.74E-53 | -1.69E-46 |
| MS.gene049633 | MS.gene79681 | -0.817151 | 3.83E-52 | -1.69E-46 |
| MS.gene05010 | MS.gene79681 | -0.818344 | 2.06E-52 | -1.69E-46 |
| MS.gene050165 | MS.gene79681 | -0.800666 | 1.29E-48 | -1.69E-46 |
| MS.gene050170 | MS.gene79681 | -0.84906 | 4.12E-60 | -1.69E-46 |
| MS.gene050216 | MS.gene79681 | -0.811702 | 6.13E-51 | -1.69E-46 |
| MS.gene050323 | MS.gene79681 | -0.818796 | 1.63E-52 | -1.69E-46 |
| MS.gene050496 | MS.gene79681 | -0.874925 | 4.61E-68 | -1.69E-46 |
| MS.gene050504 | MS.gene79681 | -0.842306 | 2.80E-58 | -1.69E-46 |
| MS.gene050518 | MS.gene79681 | -0.817829 | 2.69E-52 | -1.69E-46 |
| MS.gene050612 | MS.gene79681 | -0.847744 | 9.53E-60 | -1.69E-46 |
| MS.gene050675 | MS.gene79681 | -0.832405 | 9.63E-56 | -1.69E-46 |
| MS.gene050699 | MS.gene79681 | -0.825829 | 3.79E-54 | -1.69E-46 |
| MS.gene050868 | MS.gene79681 | -0.848569 | 5.64E-60 | -1.69E-46 |
| MS.gene050871 | MS.gene79681 | -0.846721 | 1.82E-59 | -1.69E-46 |
| MS.gene050876 | MS.gene79681 | -0.805154 | 1.53E-49 | -1.69E-46 |
| MS.gene050904 | MS.gene79681 | -0.822287 | 2.57E-53 | -1.69E-46 |
| MS.gene050986 | MS.gene79681 | -0.817113 | 3.90E-52 | -1.69E-46 |
| MS.gene051044 | MS.gene79681 | 0.807774 | 4.29E-50 | -1.69E-46 |
| MS.gene051317 | MS.gene79681 | -0.815483 | 9.04E-52 | -1.69E-46 |
| MS.gene051364 | MS.gene79681 | 0.848234 | 6.98E-60 | -1.69E-46 |
| MS.gene051366 | MS.gene79681 | 0.858198 | 9.71E-63 | -1.69E-46 |
| MS.gene051367 | MS.gene79681 | 0.846951 | 1.57E-59 | -1.69E-46 |
| MS.gene051858 | MS.gene79681 | -0.803128 | 4.04E-49 | -1.69E-46 |
| MS.gene051946 | MS.gene79681 | 0.802522 | 5.39E-49 | -1.69E-46 |
| MS.gene052482 | MS.gene79681 | -0.806005 | 1.01E-49 | -1.69E-46 |
| MS.gene052486 | MS.gene79681 | -0.82014 | 8.03E-53 | -1.69E-46 |
| MS.gene052566 | MS.gene79681 | 0.819291 | 1.25E-52 | -1.69E-46 |
| MS.gene052966 | MS.gene79681 | -0.826099 | 3.27E-54 | -1.69E-46 |
| MS.gene053203 | MS.gene79681 | -0.817876 | 2.63E-52 | -1.69E-46 |
| MS.gene053420 | MS.gene79681 | 0.814405 | 1.57E-51 | -1.69E-46 |
| MS.gene053561 | MS.gene79681 | 0.813357 | 2.67E-51 | -1.69E-46 |
| MS.gene053824 | MS.gene79681 | -0.804651 | 1.95E-49 | -1.69E-46 |
| MS.gene05470 | MS.gene79681 | -0.818825 | 1.60E-52 | -1.69E-46 |
| MS.gene054954 | MS.gene79681 | -0.843749 | 1.16E-58 | -1.69E-46 |
| MS.gene055202 | MS.gene79681 | 0.820515 | 6.59E-53 | -1.69E-46 |
| MS.gene055362 | MS.gene79681 | -0.830943 | 2.21E-55 | -1.69E-46 |
| MS.gene055502 | MS.gene79681 | -0.834127 | 3.59E-56 | -1.69E-46 |
| MS.gene055577 | MS.gene79681 | -0.842412 | 2.63E-58 | -1.69E-46 |
| MS.gene055748 | MS.gene79681 | -0.800589 | 1.34E-48 | -1.69E-46 |
| MS.gene055751 | MS.gene79681 | -0.820673 | 6.06E-53 | -1.69E-46 |
| MS.gene055776 | MS.gene79681 | -0.842369 | 2.70E-58 | -1.69E-46 |
| MS.gene05589 | MS.gene79681 | -0.850679 | 1.45E-60 | -1.69E-46 |
| MS.gene055942 | MS.gene79681 | 0.831157 | 1.96E-55 | -1.69E-46 |
| MS.gene056046 | MS.gene79681 | -0.827528 | 1.49E-54 | -1.69E-46 |
| MS.gene056504 | MS.gene79681 | -0.866617 | 2.50E-65 | -1.69E-46 |
| MS.gene056510 | MS.gene79681 | -0.834193 | 3.45E-56 | -1.69E-46 |
| MS.gene056657 | MS.gene79681 | -0.814378 | 1.59E-51 | -1.69E-46 |
| MS.gene057014 | MS.gene79681 | 0.855105 | 7.88E-62 | -1.69E-46 |
| MS.gene058171 | MS.gene79681 | 0.826065 | 3.33E-54 | -1.69E-46 |
| MS.gene058173 | MS.gene79681 | 0.811589 | 6.49E-51 | -1.69E-46 |
| MS.gene058175 | MS.gene79681 | 0.825627 | 4.23E-54 | -1.69E-46 |
| MS.gene058334 | MS.gene79681 | 0.853818 | 1.86E-61 | -1.69E-46 |
| MS.gene05837 | MS.gene79681 | -0.815891 | 7.33E-52 | -1.69E-46 |
| MS.gene058419 | MS.gene79681 | -0.822541 | 2.24E-53 | -1.69E-46 |
| MS.gene058493 | MS.gene79681 | 0.802404 | 5.70E-49 | -1.69E-46 |
| MS.gene058773 | MS.gene79681 | -0.844076 | 9.46E-59 | -1.69E-46 |
| MS.gene059022 | MS.gene79681 | -0.847546 | 1.08E-59 | -1.69E-46 |
| MS.gene059023 | MS.gene79681 | -0.825893 | 3.66E-54 | -1.69E-46 |
| MS.gene059677 | MS.gene79681 | -0.837879 | 4.01E-57 | -1.69E-46 |
| MS.gene059701 | MS.gene79681 | 0.810702 | 1.01E-50 | -1.69E-46 |
| MS.gene059718 | MS.gene79681 | -0.811054 | 8.48E-51 | -1.69E-46 |
| MS.gene059837 | MS.gene79681 | -0.806851 | 6.73E-50 | -1.69E-46 |
| MS.gene059865 | MS.gene79681 | -0.852294 | 5.07E-61 | -1.69E-46 |
| MS.gene059902 | MS.gene79681 | -0.802033 | 6.80E-49 | -1.69E-46 |
| MS.gene060595 | MS.gene79681 | 0.87093 | 1.01E-66 | -1.69E-46 |
| MS.gene060703 | MS.gene79681 | -0.84426 | 8.44E-59 | -1.69E-46 |
| MS.gene060762 | MS.gene79681 | -0.847307 | 1.26E-59 | -1.69E-46 |
| MS.gene060778 | MS.gene79681 | -0.825328 | 4.98E-54 | -1.69E-46 |
| MS.gene06077 | MS.gene79681 | -0.840751 | 7.20E-58 | -1.69E-46 |
| MS.gene060982 | MS.gene79681 | -0.848443 | 6.11E-60 | -1.69E-46 |
| MS.gene061044 | MS.gene79681 | 0.816418 | 5.59E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79681.t1 | MTR_8g028565 | 94.170 | 223 | 8 | 2 | 2 | 219 | 116 | 338 | 1.76e-132 | 376 |
| MS.gene79681.t1 | MTR_7g079040 | 58.571 | 210 | 61 | 5 | 10 | 214 | 124 | 312 | 7.11e-75 | 229 |
| MS.gene79681.t1 | MTR_1g099600 | 64.912 | 114 | 33 | 3 | 17 | 125 | 161 | 272 | 4.75e-43 | 147 |
| MS.gene79681.t1 | MTR_2g032030 | 43.655 | 197 | 76 | 6 | 21 | 187 | 238 | 429 | 2.60e-41 | 146 |
| MS.gene79681.t1 | MTR_2g032030 | 47.024 | 168 | 62 | 4 | 21 | 165 | 238 | 401 | 1.27e-40 | 143 |
| MS.gene79681.t1 | MTR_8g098945 | 63.043 | 92 | 25 | 2 | 41 | 128 | 130 | 216 | 1.80e-33 | 121 |
| MS.gene79681.t1 | MTR_7g109600 | 50.862 | 116 | 39 | 4 | 20 | 120 | 24 | 136 | 7.45e-30 | 112 |
| MS.gene79681.t1 | MTR_2g016770 | 53.608 | 97 | 34 | 3 | 14 | 100 | 4 | 99 | 1.85e-27 | 104 |
| MS.gene79681.t1 | MTR_2g016770 | 56.180 | 89 | 28 | 3 | 22 | 100 | 4 | 91 | 3.48e-26 | 100 |
| MS.gene79681.t1 | MTR_8g087000 | 47.115 | 104 | 38 | 3 | 21 | 108 | 46 | 148 | 2.06e-24 | 97.1 |
| MS.gene79681.t1 | MTR_8g087000 | 62.121 | 66 | 21 | 1 | 40 | 101 | 77 | 142 | 6.12e-24 | 95.9 |
| MS.gene79681.t1 | MTR_5g016610 | 55.422 | 83 | 28 | 2 | 20 | 93 | 174 | 256 | 5.11e-23 | 94.0 |
| MS.gene79681.t1 | MTR_2g083870 | 68.852 | 61 | 15 | 1 | 40 | 96 | 80 | 140 | 1.32e-22 | 92.8 |
| MS.gene79681.t1 | MTR_2g024380 | 46.078 | 102 | 48 | 3 | 19 | 115 | 230 | 329 | 1.44e-22 | 95.1 |
| MS.gene79681.t1 | MTR_4g127040 | 56.627 | 83 | 27 | 2 | 20 | 93 | 220 | 302 | 2.28e-22 | 93.2 |
| MS.gene79681.t1 | MTR_1g009613 | 53.659 | 82 | 29 | 2 | 21 | 93 | 238 | 319 | 1.55e-21 | 91.3 |
| MS.gene79681.t1 | MTR_2g024350 | 47.727 | 88 | 39 | 3 | 33 | 115 | 1 | 86 | 5.40e-21 | 87.8 |
| MS.gene79681.t1 | MTR_4g094908 | 54.878 | 82 | 28 | 3 | 21 | 93 | 242 | 323 | 1.41e-20 | 88.6 |
| MS.gene79681.t1 | MTR_8g069935 | 43.548 | 124 | 52 | 6 | 18 | 127 | 305 | 424 | 4.27e-20 | 88.2 |
| MS.gene79681.t1 | MTR_8g067635 | 48.352 | 91 | 42 | 2 | 21 | 106 | 330 | 420 | 6.57e-20 | 87.8 |
| MS.gene79681.t1 | MTR_6g053200 | 49.412 | 85 | 37 | 2 | 19 | 97 | 307 | 391 | 1.25e-19 | 87.0 |
| MS.gene79681.t1 | MTR_8g067650 | 46.316 | 95 | 44 | 3 | 19 | 106 | 316 | 410 | 2.09e-18 | 83.6 |
| MS.gene79681.t1 | MTR_1g070455 | 61.404 | 57 | 18 | 1 | 41 | 93 | 294 | 350 | 3.77e-18 | 82.0 |
| MS.gene79681.t1 | MTR_1g086790 | 46.667 | 75 | 34 | 3 | 41 | 110 | 159 | 232 | 1.16e-16 | 77.4 |
| MS.gene79681.t1 | MTR_7g011820 | 38.889 | 108 | 60 | 3 | 17 | 119 | 386 | 492 | 3.35e-16 | 77.0 |
| MS.gene79681.t1 | MTR_4g094588 | 52.174 | 69 | 25 | 3 | 41 | 105 | 179 | 243 | 6.33e-16 | 75.5 |
| MS.gene79681.t1 | MTR_0117s0040 | 39.286 | 84 | 47 | 1 | 14 | 93 | 48 | 131 | 9.88e-16 | 73.9 |
| MS.gene79681.t1 | MTR_3g108960 | 44.048 | 84 | 34 | 3 | 21 | 93 | 290 | 371 | 1.09e-15 | 75.1 |
| MS.gene79681.t1 | MTR_7g109800 | 44.186 | 86 | 42 | 2 | 41 | 120 | 146 | 231 | 3.94e-15 | 72.8 |
| MS.gene79681.t1 | MTR_5g042920 | 40.594 | 101 | 40 | 4 | 16 | 96 | 279 | 379 | 2.13e-14 | 71.6 |
| MS.gene79681.t1 | MTR_4g007060 | 44.595 | 74 | 37 | 1 | 38 | 107 | 126 | 199 | 4.47e-14 | 69.7 |
| MS.gene79681.t1 | MTR_5g091390 | 53.333 | 60 | 23 | 2 | 41 | 96 | 158 | 216 | 4.63e-14 | 70.1 |
| MS.gene79681.t1 | MTR_4g007060 | 44.595 | 74 | 37 | 1 | 38 | 107 | 160 | 233 | 5.92e-14 | 69.7 |
| MS.gene79681.t1 | MTR_7g110720 | 45.205 | 73 | 36 | 1 | 38 | 106 | 214 | 286 | 8.30e-14 | 70.1 |
| MS.gene79681.t1 | MTR_4g094412 | 38.636 | 88 | 47 | 2 | 14 | 97 | 211 | 295 | 8.89e-14 | 70.1 |
| MS.gene79681.t1 | MTR_7g109600 | 50.769 | 65 | 27 | 2 | 58 | 120 | 9 | 70 | 9.11e-14 | 67.8 |
| MS.gene79681.t1 | MTR_7g110720 | 45.205 | 73 | 36 | 1 | 38 | 106 | 187 | 259 | 9.35e-14 | 69.7 |
| MS.gene79681.t1 | MTR_4g094412 | 38.636 | 88 | 47 | 2 | 14 | 97 | 220 | 304 | 9.68e-14 | 69.7 |
| MS.gene79681.t1 | MTR_7g062220 | 32.727 | 165 | 95 | 5 | 24 | 175 | 106 | 267 | 1.44e-13 | 68.6 |
| MS.gene79681.t1 | MTR_2g105060 | 36.275 | 102 | 58 | 3 | 38 | 133 | 92 | 192 | 1.53e-13 | 67.8 |
| MS.gene79681.t1 | MTR_4g082580 | 35.345 | 116 | 65 | 4 | 13 | 119 | 249 | 363 | 1.66e-13 | 68.9 |
| MS.gene79681.t1 | MTR_3g104750 | 38.889 | 90 | 48 | 4 | 12 | 95 | 74 | 162 | 2.01e-13 | 65.9 |
| MS.gene79681.t1 | MTR_2g105060 | 36.275 | 102 | 58 | 3 | 38 | 133 | 167 | 267 | 2.33e-13 | 68.2 |
| MS.gene79681.t1 | MTR_4g132430 | 49.206 | 63 | 28 | 1 | 38 | 96 | 259 | 321 | 2.35e-13 | 68.6 |
| MS.gene79681.t1 | MTR_2g033820 | 48.333 | 60 | 26 | 2 | 41 | 96 | 204 | 262 | 2.67e-13 | 68.2 |
| MS.gene79681.t1 | MTR_4g132430 | 49.206 | 63 | 28 | 1 | 38 | 96 | 125 | 187 | 2.98e-13 | 68.2 |
| MS.gene79681.t1 | MTR_5g043880 | 52.632 | 57 | 22 | 2 | 41 | 93 | 125 | 180 | 3.80e-13 | 67.0 |
| MS.gene79681.t1 | MTR_7g100510 | 49.153 | 59 | 27 | 1 | 41 | 96 | 362 | 420 | 5.86e-13 | 67.4 |
| MS.gene79681.t1 | MTR_3g056100 | 37.624 | 101 | 45 | 4 | 18 | 101 | 380 | 479 | 8.27e-13 | 67.0 |
| MS.gene79681.t1 | MTR_3g056100 | 37.624 | 101 | 45 | 4 | 18 | 101 | 236 | 335 | 8.87e-13 | 67.0 |
| MS.gene79681.t1 | MTR_3g056100 | 37.624 | 101 | 45 | 4 | 18 | 101 | 367 | 466 | 9.29e-13 | 67.0 |
| MS.gene79681.t1 | MTR_3g056100 | 37.624 | 101 | 45 | 4 | 18 | 101 | 223 | 322 | 9.59e-13 | 67.0 |
| MS.gene79681.t1 | MTR_2g023930 | 46.032 | 63 | 30 | 1 | 38 | 96 | 303 | 365 | 1.06e-12 | 67.0 |
| MS.gene79681.t1 | MTR_3g053330 | 41.096 | 73 | 39 | 1 | 38 | 106 | 249 | 321 | 1.62e-12 | 66.2 |
| MS.gene79681.t1 | MTR_4g049760 | 42.667 | 75 | 39 | 1 | 36 | 106 | 286 | 360 | 2.27e-12 | 65.9 |
| MS.gene79681.t1 | MTR_5g094430 | 46.154 | 65 | 30 | 2 | 41 | 101 | 253 | 316 | 3.05e-12 | 65.5 |
| MS.gene79681.t1 | MTR_5g094430 | 46.154 | 65 | 30 | 2 | 41 | 101 | 365 | 428 | 3.25e-12 | 65.5 |
| MS.gene79681.t1 | MTR_5g094430 | 46.154 | 65 | 30 | 2 | 41 | 101 | 231 | 294 | 3.28e-12 | 65.1 |
| MS.gene79681.t1 | MTR_4g122530 | 44.262 | 61 | 29 | 2 | 41 | 97 | 209 | 268 | 6.38e-12 | 64.3 |
| MS.gene79681.t1 | MTR_8g092010 | 46.032 | 63 | 29 | 2 | 38 | 96 | 106 | 167 | 7.05e-12 | 62.4 |
| MS.gene79681.t1 | MTR_2g045360 | 35.849 | 106 | 59 | 2 | 5 | 106 | 181 | 281 | 7.45e-12 | 64.3 |
| MS.gene79681.t1 | MTR_7g080020 | 35.484 | 93 | 51 | 4 | 14 | 101 | 469 | 557 | 8.68e-12 | 64.3 |
| MS.gene79681.t1 | MTR_7g009730 | 36.264 | 91 | 51 | 2 | 20 | 106 | 202 | 289 | 8.86e-12 | 64.3 |
| MS.gene79681.t1 | MTR_4g049790 | 40.000 | 75 | 41 | 1 | 36 | 106 | 308 | 382 | 9.89e-12 | 63.9 |
| MS.gene79681.t1 | MTR_1g015140 | 51.724 | 58 | 23 | 2 | 41 | 94 | 103 | 159 | 1.12e-11 | 61.2 |
| MS.gene79681.t1 | MTR_7g071120 | 39.535 | 86 | 38 | 3 | 41 | 113 | 325 | 409 | 1.91e-11 | 63.2 |
| MS.gene79681.t1 | MTR_2g088000 | 43.750 | 64 | 32 | 1 | 37 | 96 | 346 | 409 | 2.17e-11 | 63.2 |
| MS.gene79681.t1 | MTR_7g080000 | 40.000 | 85 | 42 | 4 | 22 | 99 | 412 | 494 | 2.86e-11 | 62.8 |
| MS.gene79681.t1 | MTR_3g009470 | 46.154 | 65 | 30 | 2 | 41 | 101 | 496 | 559 | 2.89e-11 | 62.8 |
| MS.gene79681.t1 | MTR_1g078260 | 41.667 | 96 | 41 | 6 | 27 | 108 | 233 | 327 | 2.98e-11 | 62.4 |
| MS.gene79681.t1 | MTR_8g087000 | 44.068 | 59 | 30 | 1 | 58 | 113 | 37 | 95 | 3.03e-11 | 60.5 |
| MS.gene79681.t1 | MTR_3g106060 | 37.778 | 90 | 51 | 2 | 41 | 126 | 139 | 227 | 3.60e-11 | 61.6 |
| MS.gene79681.t1 | MTR_3g095040 | 43.750 | 64 | 31 | 2 | 37 | 96 | 115 | 177 | 5.33e-11 | 60.1 |
| MS.gene79681.t1 | MTR_3g031220 | 42.857 | 77 | 40 | 2 | 41 | 114 | 366 | 441 | 5.76e-11 | 61.6 |
| MS.gene79681.t1 | MTR_1g013760 | 43.860 | 57 | 28 | 1 | 41 | 93 | 141 | 197 | 6.26e-11 | 60.8 |
| MS.gene79681.t1 | MTR_4g013260 | 45.161 | 62 | 31 | 1 | 41 | 99 | 337 | 398 | 7.99e-11 | 61.2 |
| MS.gene79681.t1 | MTR_7g028415 | 43.860 | 57 | 29 | 1 | 41 | 94 | 94 | 150 | 8.55e-11 | 58.9 |
| MS.gene79681.t1 | MTR_7g028710 | 43.860 | 57 | 29 | 1 | 41 | 94 | 94 | 150 | 8.55e-11 | 58.9 |
| MS.gene79681.t1 | MTR_5g097490 | 44.928 | 69 | 33 | 2 | 38 | 102 | 250 | 317 | 8.83e-11 | 60.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79681.t1 | AT4G01250 | 57.672 | 189 | 61 | 4 | 17 | 198 | 105 | 281 | 3.24e-65 | 204 |
| MS.gene79681.t1 | AT5G52830 | 54.902 | 153 | 50 | 5 | 19 | 164 | 143 | 283 | 2.84e-45 | 154 |
| MS.gene79681.t1 | AT1G30650 | 42.593 | 216 | 86 | 8 | 21 | 205 | 188 | 396 | 1.94e-38 | 138 |
| MS.gene79681.t1 | AT2G34830 | 42.857 | 210 | 83 | 6 | 17 | 189 | 179 | 388 | 6.85e-37 | 134 |
| MS.gene79681.t1 | AT2G34830 | 42.857 | 210 | 83 | 6 | 17 | 189 | 188 | 397 | 9.86e-37 | 133 |
| MS.gene79681.t1 | AT4G23550 | 59.130 | 115 | 38 | 3 | 26 | 135 | 125 | 235 | 4.26e-35 | 126 |
| MS.gene79681.t1 | AT5G45050 | 58.065 | 93 | 32 | 2 | 19 | 104 | 1156 | 1248 | 4.43e-30 | 117 |
| MS.gene79681.t1 | AT5G45050 | 58.065 | 93 | 32 | 2 | 19 | 104 | 1128 | 1220 | 4.55e-30 | 117 |
| MS.gene79681.t1 | AT5G45050 | 58.065 | 93 | 32 | 2 | 19 | 104 | 1017 | 1109 | 4.95e-30 | 117 |
| MS.gene79681.t1 | AT1G29280 | 47.009 | 117 | 41 | 4 | 7 | 108 | 31 | 141 | 1.23e-27 | 105 |
| MS.gene79681.t1 | AT3G58710 | 46.957 | 115 | 39 | 4 | 17 | 109 | 38 | 152 | 3.30e-25 | 99.8 |
| MS.gene79681.t1 | AT3G58710 | 46.087 | 115 | 39 | 3 | 18 | 109 | 37 | 151 | 1.65e-24 | 97.8 |
| MS.gene79681.t1 | AT2G23320 | 54.217 | 83 | 29 | 3 | 20 | 93 | 215 | 297 | 2.50e-21 | 90.1 |
| MS.gene79681.t1 | AT2G30590 | 65.517 | 58 | 16 | 1 | 41 | 94 | 314 | 371 | 4.64e-20 | 87.4 |
| MS.gene79681.t1 | AT4G31550 | 51.220 | 82 | 31 | 2 | 21 | 93 | 221 | 302 | 9.11e-20 | 86.3 |
| MS.gene79681.t1 | AT4G24240 | 53.012 | 83 | 30 | 2 | 20 | 93 | 256 | 338 | 1.16e-19 | 86.3 |
| MS.gene79681.t1 | AT4G31550 | 51.220 | 82 | 31 | 2 | 21 | 93 | 222 | 303 | 2.71e-19 | 84.7 |
| MS.gene79681.t1 | AT3G04670 | 51.807 | 83 | 31 | 2 | 20 | 93 | 237 | 319 | 6.07e-19 | 84.0 |
| MS.gene79681.t1 | AT5G28650 | 51.807 | 83 | 31 | 2 | 20 | 93 | 237 | 319 | 6.57e-19 | 84.0 |
| MS.gene79681.t1 | AT5G45260 | 48.837 | 86 | 37 | 3 | 28 | 107 | 1197 | 1281 | 8.93e-19 | 84.7 |
| MS.gene79681.t1 | AT2G24570 | 50.000 | 82 | 32 | 2 | 21 | 93 | 219 | 300 | 7.99e-18 | 80.9 |
| MS.gene79681.t1 | AT5G46350 | 48.611 | 72 | 30 | 3 | 41 | 106 | 184 | 254 | 6.25e-16 | 75.5 |
| MS.gene79681.t1 | AT1G29860 | 54.098 | 61 | 23 | 2 | 41 | 97 | 137 | 196 | 8.93e-16 | 74.7 |
| MS.gene79681.t1 | AT4G18170 | 53.226 | 62 | 24 | 2 | 41 | 98 | 173 | 233 | 9.62e-16 | 75.1 |
| MS.gene79681.t1 | AT1G69310 | 56.604 | 53 | 22 | 1 | 41 | 93 | 148 | 199 | 2.22e-15 | 73.6 |
| MS.gene79681.t1 | AT5G49520 | 52.542 | 59 | 25 | 1 | 41 | 96 | 222 | 280 | 2.93e-15 | 73.9 |
| MS.gene79681.t1 | AT2G04880 | 49.315 | 73 | 29 | 2 | 38 | 102 | 305 | 377 | 4.30e-15 | 73.9 |
| MS.gene79681.t1 | AT2G04880 | 49.315 | 73 | 29 | 2 | 38 | 102 | 281 | 353 | 4.33e-15 | 73.9 |
| MS.gene79681.t1 | AT3G62340 | 49.398 | 83 | 32 | 4 | 23 | 96 | 96 | 177 | 4.37e-15 | 72.8 |
| MS.gene79681.t1 | AT2G21900 | 49.180 | 61 | 26 | 2 | 41 | 97 | 110 | 169 | 1.92e-14 | 69.7 |
| MS.gene79681.t1 | AT1G80840 | 43.662 | 71 | 36 | 1 | 41 | 107 | 147 | 217 | 8.65e-14 | 69.3 |
| MS.gene79681.t1 | AT1G62300 | 49.206 | 63 | 28 | 1 | 38 | 96 | 310 | 372 | 1.28e-13 | 69.7 |
| MS.gene79681.t1 | AT4G04450 | 43.836 | 73 | 37 | 1 | 38 | 106 | 196 | 268 | 1.30e-13 | 69.3 |
| MS.gene79681.t1 | AT4G04450 | 43.836 | 73 | 37 | 1 | 38 | 106 | 290 | 362 | 1.34e-13 | 69.3 |
| MS.gene79681.t1 | AT1G68150 | 43.662 | 71 | 36 | 1 | 45 | 111 | 240 | 310 | 1.46e-13 | 68.9 |
| MS.gene79681.t1 | AT4G22070 | 49.206 | 63 | 28 | 1 | 38 | 96 | 295 | 357 | 1.76e-13 | 69.3 |
| MS.gene79681.t1 | AT4G22070 | 49.206 | 63 | 28 | 1 | 38 | 96 | 295 | 357 | 1.76e-13 | 69.3 |
| MS.gene79681.t1 | AT4G22070 | 49.206 | 63 | 28 | 1 | 38 | 96 | 295 | 357 | 1.76e-13 | 69.3 |
| MS.gene79681.t1 | AT4G22070 | 49.206 | 63 | 28 | 1 | 38 | 96 | 295 | 357 | 1.76e-13 | 69.3 |
| MS.gene79681.t1 | AT1G69310 | 52.632 | 57 | 22 | 2 | 41 | 93 | 148 | 203 | 3.33e-13 | 67.4 |
| MS.gene79681.t1 | AT1G69310 | 52.632 | 57 | 22 | 2 | 41 | 93 | 148 | 203 | 3.33e-13 | 67.4 |
| MS.gene79681.t1 | AT1G69310 | 52.632 | 57 | 22 | 2 | 41 | 93 | 148 | 203 | 3.33e-13 | 67.4 |
| MS.gene79681.t1 | AT1G13960 | 46.774 | 62 | 30 | 1 | 38 | 96 | 254 | 315 | 4.02e-13 | 67.8 |
| MS.gene79681.t1 | AT1G13960 | 46.774 | 62 | 30 | 1 | 38 | 96 | 407 | 468 | 6.08e-13 | 67.4 |
| MS.gene79681.t1 | AT2G03340 | 44.776 | 67 | 34 | 1 | 38 | 101 | 413 | 479 | 7.56e-13 | 67.4 |
| MS.gene79681.t1 | AT5G26170 | 44.595 | 74 | 33 | 3 | 24 | 93 | 100 | 169 | 8.81e-13 | 64.7 |
| MS.gene79681.t1 | AT2G47260 | 48.333 | 60 | 26 | 2 | 41 | 96 | 175 | 233 | 1.04e-12 | 66.6 |
| MS.gene79681.t1 | AT5G15130 | 38.710 | 93 | 49 | 3 | 21 | 106 | 206 | 297 | 1.07e-12 | 67.0 |
| MS.gene79681.t1 | AT5G15130 | 38.710 | 93 | 49 | 3 | 21 | 106 | 164 | 255 | 1.13e-12 | 66.6 |
| MS.gene79681.t1 | AT4G39410 | 39.394 | 99 | 51 | 4 | 22 | 112 | 203 | 300 | 2.36e-12 | 65.1 |
| MS.gene79681.t1 | AT2G25000 | 46.667 | 60 | 28 | 1 | 41 | 96 | 104 | 163 | 3.36e-12 | 63.9 |
| MS.gene79681.t1 | AT2G25000 | 46.667 | 60 | 28 | 1 | 41 | 96 | 104 | 163 | 3.36e-12 | 63.9 |
| MS.gene79681.t1 | AT4G26440 | 44.578 | 83 | 38 | 3 | 41 | 115 | 373 | 455 | 4.62e-12 | 65.1 |
| MS.gene79681.t1 | AT1G80590 | 28.402 | 169 | 106 | 4 | 2 | 155 | 38 | 206 | 5.33e-12 | 63.5 |
| MS.gene79681.t1 | AT4G26640 | 37.634 | 93 | 55 | 1 | 12 | 101 | 177 | 269 | 5.66e-12 | 64.7 |
| MS.gene79681.t1 | AT4G26640 | 37.634 | 93 | 55 | 1 | 12 | 101 | 177 | 269 | 5.66e-12 | 64.7 |
| MS.gene79681.t1 | AT4G26640 | 37.634 | 93 | 55 | 1 | 12 | 101 | 177 | 269 | 5.66e-12 | 64.7 |
| MS.gene79681.t1 | AT4G26640 | 37.634 | 93 | 55 | 1 | 12 | 101 | 177 | 269 | 5.66e-12 | 64.7 |
| MS.gene79681.t1 | AT2G25000 | 46.667 | 60 | 28 | 1 | 41 | 96 | 126 | 185 | 5.68e-12 | 63.5 |
| MS.gene79681.t1 | AT4G26640 | 37.634 | 93 | 55 | 1 | 12 | 101 | 281 | 373 | 6.48e-12 | 64.7 |
| MS.gene79681.t1 | AT4G26640 | 37.634 | 93 | 55 | 1 | 12 | 101 | 353 | 445 | 6.76e-12 | 64.7 |
| MS.gene79681.t1 | AT4G26640 | 37.634 | 93 | 55 | 1 | 12 | 101 | 313 | 405 | 7.23e-12 | 64.3 |
| MS.gene79681.t1 | AT2G25000 | 46.667 | 60 | 28 | 1 | 41 | 96 | 147 | 206 | 7.75e-12 | 63.5 |
| MS.gene79681.t1 | AT4G31800 | 45.000 | 60 | 29 | 1 | 41 | 96 | 112 | 171 | 8.42e-12 | 63.2 |
| MS.gene79681.t1 | AT4G31800 | 45.000 | 60 | 29 | 1 | 41 | 96 | 177 | 236 | 9.49e-12 | 63.5 |
| MS.gene79681.t1 | AT5G07100 | 49.206 | 63 | 27 | 2 | 41 | 99 | 142 | 203 | 1.20e-11 | 62.4 |
| MS.gene79681.t1 | AT5G07100 | 49.206 | 63 | 27 | 2 | 41 | 99 | 142 | 203 | 1.20e-11 | 62.4 |
| MS.gene79681.t1 | AT5G07100 | 49.206 | 63 | 27 | 2 | 41 | 99 | 142 | 203 | 1.20e-11 | 62.4 |
| MS.gene79681.t1 | AT5G07100 | 49.206 | 63 | 27 | 2 | 41 | 99 | 142 | 203 | 1.20e-11 | 62.4 |
| MS.gene79681.t1 | AT4G01720 | 45.902 | 61 | 29 | 1 | 40 | 96 | 239 | 299 | 1.27e-11 | 63.5 |
| MS.gene79681.t1 | AT2G38470 | 36.893 | 103 | 52 | 3 | 41 | 130 | 363 | 465 | 1.40e-11 | 63.5 |
| MS.gene79681.t1 | AT1G18860 | 40.000 | 80 | 41 | 2 | 21 | 96 | 223 | 299 | 1.67e-11 | 63.5 |
| MS.gene79681.t1 | AT5G07100 | 49.206 | 63 | 27 | 2 | 41 | 99 | 235 | 296 | 2.04e-11 | 62.4 |
| MS.gene79681.t1 | AT2G37260 | 45.349 | 86 | 33 | 5 | 19 | 93 | 323 | 405 | 2.29e-11 | 62.8 |
| MS.gene79681.t1 | AT3G01080 | 39.362 | 94 | 42 | 4 | 18 | 96 | 310 | 403 | 2.30e-11 | 62.8 |
| MS.gene79681.t1 | AT3G01080 | 39.362 | 94 | 42 | 4 | 18 | 96 | 272 | 365 | 2.79e-11 | 62.4 |
| MS.gene79681.t1 | AT2G37260 | 45.349 | 86 | 33 | 5 | 19 | 93 | 241 | 323 | 2.86e-11 | 62.4 |
| MS.gene79681.t1 | AT2G37260 | 45.349 | 86 | 33 | 5 | 19 | 93 | 243 | 325 | 2.91e-11 | 62.4 |
| MS.gene79681.t1 | AT1G64000 | 39.437 | 71 | 40 | 1 | 41 | 108 | 115 | 185 | 4.76e-11 | 60.1 |
| MS.gene79681.t1 | AT2G40750 | 40.260 | 77 | 37 | 3 | 22 | 92 | 137 | 210 | 5.60e-11 | 61.6 |
| MS.gene79681.t1 | AT5G13080 | 46.552 | 58 | 26 | 2 | 41 | 94 | 68 | 124 | 7.89e-11 | 58.5 |
| MS.gene79681.t1 | AT5G56270 | 45.161 | 62 | 31 | 1 | 41 | 99 | 488 | 549 | 9.37e-11 | 61.2 |
Find 35 sgRNAs with CRISPR-Local
Find 100 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAATTTGAGTTATCTGATA+TGG | 0.292666 | 8.4:+67243648 | MS.gene79681:CDS |
| GTCAGAGAGCAAAGATGATT+TGG | 0.293031 | 8.4:+67243594 | MS.gene79681:CDS |
| TCATCTGGTGGTGACTGTTT+TGG | 0.371167 | 8.4:+67243736 | MS.gene79681:CDS |
| ACTCACAGAAATTCTCTTGC+TGG | 0.378623 | 8.4:+67243436 | MS.gene79681:CDS |
| ATATGGGCATGGAGGAAATA+TGG | 0.384293 | 8.4:+67242821 | MS.gene79681:CDS |
| GGATATGGTGACCCTTTGAT+TGG | 0.396288 | 8.4:-67242851 | None:intergenic |
| AGAAGCTCTCATCAGACATA+TGG | 0.410207 | 8.4:+67242804 | MS.gene79681:CDS |
| GTAACAGATGATTTCTTTGA+AGG | 0.418155 | 8.4:+67243673 | MS.gene79681:CDS |
| AGAGCAATACTAGCAGCAAA+AGG | 0.441287 | 8.4:-67243763 | None:intergenic |
| GAATTTCTGTGAGTTGGAGC+AGG | 0.445905 | 8.4:-67243427 | None:intergenic |
| TCTTCAGCAGTGTCAGTTTG+TGG | 0.454123 | 8.4:-67243484 | None:intergenic |
| GCAAGAGAATTTCTGTGAGT+TGG | 0.458253 | 8.4:-67243433 | None:intergenic |
| TACAGATGTAGCAGTTCAAA+AGG | 0.483623 | 8.4:+67243322 | MS.gene79681:intron |
| TAGGAAGATTCAGCATAAGA+AGG | 0.490182 | 8.4:+67242763 | MS.gene79681:intron |
| TTCCTCTTCAGCTTCTGATG+TGG | 0.499055 | 8.4:-67243545 | None:intergenic |
| ATCAGAAGCTGAAGAGGAAG+AGG | 0.515216 | 8.4:+67243549 | MS.gene79681:CDS |
| TATGTAACTATGAACATTGA+TGG | 0.516786 | 8.4:-67243385 | None:intergenic |
| AGTATTGCTCTTCCTGCTTG+TGG | 0.519938 | 8.4:+67243775 | MS.gene79681:CDS |
| GAAGGTTTAGATGAACTGAC+AGG | 0.537316 | 8.4:+67243691 | MS.gene79681:CDS |
| GAAGCTCTCATCAGACATAT+GGG | 0.541248 | 8.4:+67242805 | MS.gene79681:CDS |
| ATCCACATCAGAAGCTGAAG+AGG | 0.543617 | 8.4:+67243543 | MS.gene79681:CDS |
| CATCATTGGCCACCACAAGC+AGG | 0.559915 | 8.4:-67243787 | None:intergenic |
| GAGCAATACTAGCAGCAAAA+GGG | 0.577414 | 8.4:-67243762 | None:intergenic |
| ATTGCTCTTCCTGCTTGTGG+TGG | 0.580832 | 8.4:+67243778 | MS.gene79681:CDS |
| TCACACCAAGATCCAAAAGA+AGG | 0.586020 | 8.4:+67242489 | MS.gene79681:CDS |
| AATTTCTGTGAGTTGGAGCA+GGG | 0.599997 | 8.4:-67243426 | None:intergenic |
| TCAAAGGGTCACCATATCCA+AGG | 0.606385 | 8.4:+67242855 | MS.gene79681:CDS |
| AATGATGAATGATGATGATG+AGG | 0.613568 | 8.4:+67243621 | MS.gene79681:CDS |
| GTGTCAGTTTGTGGTGACAA+TGG | 0.619638 | 8.4:-67243475 | None:intergenic |
| ATGTAACTATGAACATTGAT+GGG | 0.626118 | 8.4:-67243384 | None:intergenic |
| ATGTTCATAGTTACATACAC+TGG | 0.626605 | 8.4:+67243391 | MS.gene79681:CDS |
| CAGCTAAGAAACAAGTTGAG+AGG | 0.631582 | 8.4:+67243350 | MS.gene79681:CDS |
| TCTCATCAGACATATGGGCA+TGG | 0.674402 | 8.4:+67242810 | MS.gene79681:CDS |
| CATCAGACATATGGGCATGG+AGG | 0.678030 | 8.4:+67242813 | MS.gene79681:CDS |
| AAAACAGTAGCATCATCTGG+TGG | 0.715149 | 8.4:+67243724 | MS.gene79681:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTCTATATTGTATATATAA+TGG | - | chr8.4:67242546-67242565 | None:intergenic | 10.0% |
| !!! | AAAATCATTTTTCTTTAAAT+GGG | - | chr8.4:67242970-67242989 | None:intergenic | 10.0% |
| !!! | TCAATAAAAATCATATATTT+TGG | + | chr8.4:67242601-67242620 | MS.gene79681:intron | 10.0% |
| !!! | TTAATTAAGTTGTTTATATA+AGG | + | chr8.4:67243265-67243284 | MS.gene79681:intron | 10.0% |
| !! | TTTGCAAATTTAAAGAAAAA+TGG | + | chr8.4:67242921-67242940 | MS.gene79681:intron | 15.0% |
| !!! | AAATTTTTAAAAACTAACCT+TGG | - | chr8.4:67242875-67242894 | None:intergenic | 15.0% |
| !!! | AATGACTAATTTTCTAAAAA+AGG | - | chr8.4:67242698-67242717 | None:intergenic | 15.0% |
| !!! | GAAAATCATTTTTCTTTAAA+TGG | - | chr8.4:67242971-67242990 | None:intergenic | 15.0% |
| !!! | TAAATTTGCAAAATACTTTT+GGG | - | chr8.4:67242913-67242932 | None:intergenic | 15.0% |
| !!! | TTAAATTTGCAAAATACTTT+TGG | - | chr8.4:67242914-67242933 | None:intergenic | 15.0% |
| !! | ATGTAAGACATATCAATAAA+CGG | + | chr8.4:67243084-67243103 | MS.gene79681:intron | 20.0% |
| !! | CATTTATTATTCATGATTTG+AGG | + | chr8.4:67242714-67242733 | MS.gene79681:intron | 20.0% |
| !! | TCAAATAAGTCGATATAAAT+AGG | - | chr8.4:67243018-67243037 | None:intergenic | 20.0% |
| !!! | AAATTTGCAAAATACTTTTG+GGG | - | chr8.4:67242912-67242931 | None:intergenic | 20.0% |
| !!! | AACTTTTTTTAGTTTCAAAG+GGG | - | chr8.4:67242295-67242314 | None:intergenic | 20.0% |
| !!! | CTTATTTTCATAAGTTCTTT+AGG | + | chr8.4:67243114-67243133 | MS.gene79681:intron | 20.0% |
| !!! | GAACTTTTTTTAGTTTCAAA+GGG | - | chr8.4:67242296-67242315 | None:intergenic | 20.0% |
| ! | AATTTGCATAATCCTAGATA+TGG | - | chr8.4:67242646-67242665 | None:intergenic | 25.0% |
| ! | ATGTAACTATGAACATTGAT+GGG | - | chr8.4:67243387-67243406 | None:intergenic | 25.0% |
| ! | TATGTAACTATGAACATTGA+TGG | - | chr8.4:67243388-67243407 | None:intergenic | 25.0% |
| ! | TTAAAAACTAACCTTGGATA+TGG | - | chr8.4:67242869-67242888 | None:intergenic | 25.0% |
| ! | TTACTATAAGATGTTGAAGA+AGG | - | chr8.4:67242212-67242231 | None:intergenic | 25.0% |
| !! | TGAATTTGAGTTATCTGATA+TGG | + | chr8.4:67243648-67243667 | MS.gene79681:CDS | 25.0% |
| !! | TTTTCATATGAACTGTAAGT+TGG | - | chr8.4:67243192-67243211 | None:intergenic | 25.0% |
| !!! | AACTCTTTTTTACCTTCTTT+TGG | - | chr8.4:67242504-67242523 | None:intergenic | 25.0% |
| !!! | GACTTTAATTTTCCATATCT+AGG | + | chr8.4:67242631-67242650 | MS.gene79681:intron | 25.0% |
| !!! | GATGAAACTTGTTTTGTAAA+AGG | - | chr8.4:67243523-67243542 | None:intergenic | 25.0% |
| !!! | GGAACTTTTTTTAGTTTCAA+AGG | - | chr8.4:67242297-67242316 | None:intergenic | 25.0% |
| !!! | TGCATGTTTTTGCTAATTAT+AGG | + | chr8.4:67242744-67242763 | MS.gene79681:intron | 25.0% |
| !!! | TTGTTTTGTAAAAGGTTGTT+GGG | - | chr8.4:67243515-67243534 | None:intergenic | 25.0% |
| AAGTTCATGCAATTCTTCAA+TGG | - | chr8.4:67242318-67242337 | None:intergenic | 30.0% | |
| ATGGTCAAAAACCAATCAAA+GGG | + | chr8.4:67242840-67242859 | MS.gene79681:CDS | 30.0% | |
| ATGTTCATAGTTACATACAC+TGG | + | chr8.4:67243391-67243410 | MS.gene79681:CDS | 30.0% | |
| GATGATGATTTGAAGAAGAA+AGG | - | chr8.4:67242347-67242366 | None:intergenic | 30.0% | |
| GTAACAGATGATTTCTTTGA+AGG | + | chr8.4:67243673-67243692 | MS.gene79681:CDS | 30.0% | |
| TATGGTCAAAAACCAATCAA+AGG | + | chr8.4:67242839-67242858 | MS.gene79681:CDS | 30.0% | |
| ! | AAACTTTGTTTGATTCACAG+GGG | + | chr8.4:67243295-67243314 | MS.gene79681:intron | 30.0% |
| ! | AATGATGAATGATGATGATG+AGG | + | chr8.4:67243621-67243640 | MS.gene79681:CDS | 30.0% |
| ! | CAAACTTTGTTTGATTCACA+GGG | + | chr8.4:67243294-67243313 | MS.gene79681:intron | 30.0% |
| ! | TTATTAACCAGAAGCTGTTT+TGG | - | chr8.4:67242443-67242462 | None:intergenic | 30.0% |
| ! | TTTTACCTTCTTTTGGATCT+TGG | - | chr8.4:67242497-67242516 | None:intergenic | 30.0% |
| !! | TATGAACTGTAAGTTGGTTT+CGG | - | chr8.4:67243186-67243205 | None:intergenic | 30.0% |
| !!! | CTTGTTTTGTAAAAGGTTGT+TGG | - | chr8.4:67243516-67243535 | None:intergenic | 30.0% |
| CCTGTGAATCAAACAAAGTT+TGG | - | chr8.4:67243296-67243315 | None:intergenic | 35.0% | |
| TACAGATGTAGCAGTTCAAA+AGG | + | chr8.4:67243322-67243341 | MS.gene79681:intron | 35.0% | |
| TAGGAAGATTCAGCATAAGA+AGG | + | chr8.4:67242763-67242782 | MS.gene79681:intron | 35.0% | |
| TATACAACCAAAACAGCTTC+TGG | + | chr8.4:67242433-67242452 | MS.gene79681:intron | 35.0% | |
| ! | CCAAACTTTGTTTGATTCAC+AGG | + | chr8.4:67243293-67243312 | MS.gene79681:intron | 35.0% |
| ! | GGTTGTATATGAGGTGATTT+TGG | - | chr8.4:67242422-67242441 | None:intergenic | 35.0% |
| ! | TGATGGTGATGAATAAGAGA+AGG | - | chr8.4:67242399-67242418 | None:intergenic | 35.0% |
| !! | ACTTGACTTGTTTGTTCTGT+AGG | - | chr8.4:67242257-67242276 | None:intergenic | 35.0% |
| !! | ATATGAGGTGATTTTGGTGA+TGG | - | chr8.4:67242416-67242435 | None:intergenic | 35.0% |
| !! | CTTGACTTGTTTGTTCTGTA+GGG | - | chr8.4:67242256-67242275 | None:intergenic | 35.0% |
| !!! | AGCTGTTTTGGTTGTATATG+AGG | - | chr8.4:67242431-67242450 | None:intergenic | 35.0% |
| AAAACAGTAGCATCATCTGG+TGG | + | chr8.4:67243724-67243743 | MS.gene79681:CDS | 40.0% | |
| ACTCACAGAAATTCTCTTGC+TGG | + | chr8.4:67243436-67243455 | MS.gene79681:CDS | 40.0% | |
| AGAAGCTCTCATCAGACATA+TGG | + | chr8.4:67242804-67242823 | MS.gene79681:CDS | 40.0% | |
| AGAGCAATACTAGCAGCAAA+AGG | - | chr8.4:67243766-67243785 | None:intergenic | 40.0% | |
| ATATGGGCATGGAGGAAATA+TGG | + | chr8.4:67242821-67242840 | MS.gene79681:CDS | 40.0% | |
| GAAGCTCTCATCAGACATAT+GGG | + | chr8.4:67242805-67242824 | MS.gene79681:CDS | 40.0% | |
| GAAGGTTTAGATGAACTGAC+AGG | + | chr8.4:67243691-67243710 | MS.gene79681:CDS | 40.0% | |
| GAGAAGGAAGTAGAAGATAG+AGG | - | chr8.4:67242383-67242402 | None:intergenic | 40.0% | |
| GAGCAATACTAGCAGCAAAA+GGG | - | chr8.4:67243765-67243784 | None:intergenic | 40.0% | |
| GCAAGAGAATTTCTGTGAGT+TGG | - | chr8.4:67243436-67243455 | None:intergenic | 40.0% | |
| GGAAAAACAGTAGCATCATC+TGG | + | chr8.4:67243721-67243740 | MS.gene79681:CDS | 40.0% | |
| GTCAGAGAGCAAAGATGATT+TGG | + | chr8.4:67243594-67243613 | MS.gene79681:CDS | 40.0% | |
| TCACACCAAGATCCAAAAGA+AGG | + | chr8.4:67242489-67242508 | MS.gene79681:CDS | 40.0% | |
| ! | AATTTCTGTGAGTTGGAGCA+GGG | - | chr8.4:67243429-67243448 | None:intergenic | 40.0% |
| ! | CAGCTAAGAAACAAGTTGAG+AGG | + | chr8.4:67243350-67243369 | MS.gene79681:CDS | 40.0% |
| !! | TCTTTTGGATCTTGGTGTGA+TGG | - | chr8.4:67242489-67242508 | None:intergenic | 40.0% |
| !! | TGTTGAAGAAGGTGTTGATG+AGG | - | chr8.4:67242201-67242220 | None:intergenic | 40.0% |
| AGTATTGCTCTTCCTGCTTG+TGG | + | chr8.4:67243775-67243794 | MS.gene79681:CDS | 45.0% | |
| ATCAGAAGCTGAAGAGGAAG+AGG | + | chr8.4:67243549-67243568 | MS.gene79681:CDS | 45.0% | |
| ATCCACATCAGAAGCTGAAG+AGG | + | chr8.4:67243543-67243562 | MS.gene79681:CDS | 45.0% | |
| GATCTACATGCTGTAGTCAG+AGG | + | chr8.4:67242113-67242132 | MS.gene79681:intron | 45.0% | |
| GGATATGGTGACCCTTTGAT+TGG | - | chr8.4:67242854-67242873 | None:intergenic | 45.0% | |
| GTGTCAGTTTGTGGTGACAA+TGG | - | chr8.4:67243478-67243497 | None:intergenic | 45.0% | |
| TCAAAGGGTCACCATATCCA+AGG | + | chr8.4:67242855-67242874 | MS.gene79681:CDS | 45.0% | |
| TCTCATCAGACATATGGGCA+TGG | + | chr8.4:67242810-67242829 | MS.gene79681:CDS | 45.0% | |
| TCTTCAGCAGTGTCAGTTTG+TGG | - | chr8.4:67243487-67243506 | None:intergenic | 45.0% | |
| TTCCTCTTCAGCTTCTGATG+TGG | - | chr8.4:67243548-67243567 | None:intergenic | 45.0% | |
| ! | GAATTTCTGTGAGTTGGAGC+AGG | - | chr8.4:67243430-67243449 | None:intergenic | 45.0% |
| ! | GATGAACTGACAGGTTTTGC+TGG | + | chr8.4:67243700-67243719 | MS.gene79681:CDS | 45.0% |
| !! | TCATCTGGTGGTGACTGTTT+TGG | + | chr8.4:67243736-67243755 | MS.gene79681:CDS | 45.0% |
| !! | TGAAGAAGGTGTTGATGAGG+TGG | - | chr8.4:67242198-67242217 | None:intergenic | 45.0% |
| ATTGCTCTTCCTGCTTGTGG+TGG | + | chr8.4:67243778-67243797 | MS.gene79681:CDS | 50.0% | |
| CATCAGACATATGGGCATGG+AGG | + | chr8.4:67242813-67242832 | MS.gene79681:CDS | 50.0% | |
| TAAGGTGGTTGTTGAGGTGG+TGG | - | chr8.4:67242174-67242193 | None:intergenic | 50.0% | |
| ! | TGTTGATGAGGTGGCTAAGG+TGG | - | chr8.4:67242189-67242208 | None:intergenic | 50.0% |
| !! | AGGTGTTGATGAGGTGGCTA+AGG | - | chr8.4:67242192-67242211 | None:intergenic | 50.0% |
| GGCTAAGGTGGTTGTTGAGG+TGG | - | chr8.4:67242177-67242196 | None:intergenic | 55.0% | |
| GGTGGCTAAGGTGGTTGTTG+AGG | - | chr8.4:67242180-67242199 | None:intergenic | 55.0% | |
| AGGAGGAAGAGGAGGAGGTG+AGG | - | chr8.4:67242148-67242167 | None:intergenic | 60.0% | |
| GGAAGAGGAGGAGGTGAGGT+TGG | - | chr8.4:67242144-67242163 | None:intergenic | 60.0% | |
| ! | GGTGGTTGTTGAGGTGGTGG+AGG | - | chr8.4:67242171-67242190 | None:intergenic | 60.0% |
| !! | GGTTGTTGAGGTGGTGGAGG+AGG | - | chr8.4:67242168-67242187 | None:intergenic | 60.0% |
| !! | TGTTGAGGTGGTGGAGGAGG+AGG | - | chr8.4:67242165-67242184 | None:intergenic | 60.0% |
| GGAGGAGGAGGAAGAGGAGG+AGG | - | chr8.4:67242153-67242172 | None:intergenic | 65.0% | |
| GGTGGAGGAGGAGGAAGAGG+AGG | - | chr8.4:67242156-67242175 | None:intergenic | 65.0% | |
| !! | GGTGGTGGAGGAGGAGGAAG+AGG | - | chr8.4:67242159-67242178 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 67242098 | 67243807 | 67242098 | ID=MS.gene79681 |
| chr8.4 | mRNA | 67242098 | 67243807 | 67242098 | ID=MS.gene79681.t1;Parent=MS.gene79681 |
| chr8.4 | exon | 67242098 | 67242103 | 67242098 | ID=MS.gene79681.t1.exon1;Parent=MS.gene79681.t1 |
| chr8.4 | CDS | 67242098 | 67242103 | 67242098 | ID=cds.MS.gene79681.t1;Parent=MS.gene79681.t1 |
| chr8.4 | exon | 67242449 | 67242510 | 67242449 | ID=MS.gene79681.t1.exon2;Parent=MS.gene79681.t1 |
| chr8.4 | CDS | 67242449 | 67242510 | 67242449 | ID=cds.MS.gene79681.t1;Parent=MS.gene79681.t1 |
| chr8.4 | exon | 67242766 | 67242876 | 67242766 | ID=MS.gene79681.t1.exon3;Parent=MS.gene79681.t1 |
| chr8.4 | CDS | 67242766 | 67242876 | 67242766 | ID=cds.MS.gene79681.t1;Parent=MS.gene79681.t1 |
| chr8.4 | exon | 67243327 | 67243807 | 67243327 | ID=MS.gene79681.t1.exon4;Parent=MS.gene79681.t1 |
| chr8.4 | CDS | 67243327 | 67243807 | 67243327 | ID=cds.MS.gene79681.t1;Parent=MS.gene79681.t1 |
| Gene Sequence |
| Protein sequence |
