Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80715.t1 | XP_003613201.1 | 97.4 | 302 | 8 | 0 | 1 | 302 | 27 | 328 | 5.40E-171 | 610.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80715.t1 | G7K078 | 97.4 | 302 | 8 | 0 | 1 | 302 | 27 | 328 | 3.9e-171 | 610.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049159 | MS.gene80715 | 0.806521 | 7.90E-50 | -1.69E-46 |
| MS.gene049254 | MS.gene80715 | 0.824158 | 9.39E-54 | -1.69E-46 |
| MS.gene049283 | MS.gene80715 | 0.826461 | 2.68E-54 | -1.69E-46 |
| MS.gene049419 | MS.gene80715 | -0.81417 | 1.77E-51 | -1.69E-46 |
| MS.gene049452 | MS.gene80715 | 0.82625 | 3.01E-54 | -1.69E-46 |
| MS.gene049499 | MS.gene80715 | 0.83386 | 4.18E-56 | -1.69E-46 |
| MS.gene049983 | MS.gene80715 | 0.882726 | 8.18E-71 | -1.69E-46 |
| MS.gene050384 | MS.gene80715 | 0.807607 | 4.65E-50 | -1.69E-46 |
| MS.gene050386 | MS.gene80715 | 0.801227 | 9.94E-49 | -1.69E-46 |
| MS.gene050414 | MS.gene80715 | 0.804501 | 2.10E-49 | -1.69E-46 |
| MS.gene050646 | MS.gene80715 | 0.82442 | 8.15E-54 | -1.69E-46 |
| MS.gene050654 | MS.gene80715 | 0.818912 | 1.53E-52 | -1.69E-46 |
| MS.gene050737 | MS.gene80715 | 0.824039 | 1.00E-53 | -1.69E-46 |
| MS.gene050759 | MS.gene80715 | 0.807394 | 5.17E-50 | -1.69E-46 |
| MS.gene050826 | MS.gene80715 | 0.807248 | 5.55E-50 | -1.69E-46 |
| MS.gene050941 | MS.gene80715 | 0.834899 | 2.29E-56 | -1.69E-46 |
| MS.gene051122 | MS.gene80715 | 0.816778 | 4.64E-52 | -1.69E-46 |
| MS.gene051198 | MS.gene80715 | 0.80495 | 1.69E-49 | -1.69E-46 |
| MS.gene051597 | MS.gene80715 | 0.800127 | 1.67E-48 | -1.69E-46 |
| MS.gene051856 | MS.gene80715 | 0.808832 | 2.55E-50 | -1.69E-46 |
| MS.gene051924 | MS.gene80715 | -0.806758 | 7.04E-50 | -1.69E-46 |
| MS.gene052463 | MS.gene80715 | 0.80816 | 3.55E-50 | -1.69E-46 |
| MS.gene052674 | MS.gene80715 | 0.836609 | 8.46E-57 | -1.69E-46 |
| MS.gene052675 | MS.gene80715 | 0.838596 | 2.62E-57 | -1.69E-46 |
| MS.gene052677 | MS.gene80715 | 0.836764 | 7.73E-57 | -1.69E-46 |
| MS.gene052954 | MS.gene80715 | 0.823389 | 1.42E-53 | -1.69E-46 |
| MS.gene053006 | MS.gene80715 | 0.809202 | 2.13E-50 | -1.69E-46 |
| MS.gene053272 | MS.gene80715 | -0.800442 | 1.44E-48 | -1.69E-46 |
| MS.gene053456 | MS.gene80715 | 0.80763 | 4.60E-50 | -1.69E-46 |
| MS.gene05350 | MS.gene80715 | 0.809856 | 1.54E-50 | -1.69E-46 |
| MS.gene053575 | MS.gene80715 | 0.807005 | 6.24E-50 | -1.69E-46 |
| MS.gene053726 | MS.gene80715 | 0.804273 | 2.34E-49 | -1.69E-46 |
| MS.gene053931 | MS.gene80715 | 0.812011 | 5.25E-51 | -1.69E-46 |
| MS.gene054479 | MS.gene80715 | 0.823249 | 1.53E-53 | -1.69E-46 |
| MS.gene054651 | MS.gene80715 | 0.815728 | 7.97E-52 | -1.69E-46 |
| MS.gene054893 | MS.gene80715 | 0.80358 | 3.26E-49 | -1.69E-46 |
| MS.gene055841 | MS.gene80715 | 0.805253 | 1.46E-49 | -1.69E-46 |
| MS.gene056480 | MS.gene80715 | 0.832378 | 9.78E-56 | -1.69E-46 |
| MS.gene056699 | MS.gene80715 | 0.852477 | 4.50E-61 | -1.69E-46 |
| MS.gene056776 | MS.gene80715 | 0.81287 | 3.41E-51 | -1.69E-46 |
| MS.gene056779 | MS.gene80715 | 0.810751 | 9.86E-51 | -1.69E-46 |
| MS.gene056973 | MS.gene80715 | 0.802644 | 5.09E-49 | -1.69E-46 |
| MS.gene057034 | MS.gene80715 | 0.801481 | 8.82E-49 | -1.69E-46 |
| MS.gene057155 | MS.gene80715 | 0.806928 | 6.48E-50 | -1.69E-46 |
| MS.gene057208 | MS.gene80715 | 0.862744 | 4.08E-64 | -1.69E-46 |
| MS.gene057371 | MS.gene80715 | 0.80976 | 1.61E-50 | -1.69E-46 |
| MS.gene058008 | MS.gene80715 | 0.84199 | 3.40E-58 | -1.69E-46 |
| MS.gene058009 | MS.gene80715 | 0.836278 | 1.03E-56 | -1.69E-46 |
| MS.gene058010 | MS.gene80715 | 0.809271 | 2.06E-50 | -1.69E-46 |
| MS.gene058081 | MS.gene80715 | 0.800593 | 1.34E-48 | -1.69E-46 |
| MS.gene058223 | MS.gene80715 | -0.814512 | 1.48E-51 | -1.69E-46 |
| MS.gene058279 | MS.gene80715 | 0.807367 | 5.23E-50 | -1.69E-46 |
| MS.gene058429 | MS.gene80715 | 0.809117 | 2.22E-50 | -1.69E-46 |
| MS.gene058781 | MS.gene80715 | 0.83137 | 1.73E-55 | -1.69E-46 |
| MS.gene058783 | MS.gene80715 | 0.827022 | 1.97E-54 | -1.69E-46 |
| MS.gene058979 | MS.gene80715 | 0.813553 | 2.42E-51 | -1.69E-46 |
| MS.gene059283 | MS.gene80715 | 0.800447 | 1.44E-48 | -1.69E-46 |
| MS.gene05952 | MS.gene80715 | 0.823486 | 1.35E-53 | -1.69E-46 |
| MS.gene060244 | MS.gene80715 | 0.828265 | 9.90E-55 | -1.69E-46 |
| MS.gene060259 | MS.gene80715 | 0.812121 | 4.97E-51 | -1.69E-46 |
| MS.gene060527 | MS.gene80715 | 0.820909 | 5.35E-53 | -1.69E-46 |
| MS.gene06052 | MS.gene80715 | 0.812997 | 3.20E-51 | -1.69E-46 |
| MS.gene060840 | MS.gene80715 | 0.800974 | 1.12E-48 | -1.69E-46 |
| MS.gene060850 | MS.gene80715 | 0.810629 | 1.05E-50 | -1.69E-46 |
| MS.gene060851 | MS.gene80715 | 0.829186 | 5.92E-55 | -1.69E-46 |
| MS.gene060852 | MS.gene80715 | 0.827359 | 1.63E-54 | -1.69E-46 |
| MS.gene060932 | MS.gene80715 | 0.835984 | 1.22E-56 | -1.69E-46 |
| MS.gene060935 | MS.gene80715 | 0.852343 | 4.91E-61 | -1.69E-46 |
| MS.gene060937 | MS.gene80715 | 0.849909 | 2.39E-60 | -1.69E-46 |
| MS.gene06121 | MS.gene80715 | 0.82116 | 4.68E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene80715 | MS.gene70636 | PPI |
| MS.gene80715 | MS.gene29367 | PPI |
| MS.gene80715 | MS.gene022308 | PPI |
| MS.gene80715 | MS.gene25973 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80715.t1 | MTR_5g033940 | 97.351 | 302 | 8 | 0 | 1 | 302 | 27 | 328 | 0.0 | 607 |
| MS.gene80715.t1 | MTR_8g069820 | 63.072 | 306 | 107 | 2 | 1 | 302 | 42 | 345 | 2.43e-137 | 392 |
| MS.gene80715.t1 | MTR_8g069805 | 60.912 | 307 | 112 | 3 | 1 | 302 | 57 | 360 | 2.84e-132 | 380 |
| MS.gene80715.t1 | MTR_4g105600 | 50.814 | 307 | 142 | 4 | 4 | 302 | 45 | 350 | 2.20e-105 | 311 |
| MS.gene80715.t1 | MTR_3g077630 | 51.768 | 311 | 133 | 4 | 5 | 302 | 46 | 352 | 1.65e-100 | 299 |
| MS.gene80715.t1 | MTR_7g035095 | 49.498 | 299 | 139 | 5 | 1 | 299 | 31 | 317 | 1.55e-96 | 287 |
| MS.gene80715.t1 | MTR_1g086330 | 44.643 | 280 | 145 | 4 | 15 | 294 | 52 | 321 | 6.90e-74 | 230 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80715.t1 | AT1G70505 | 58.586 | 297 | 117 | 4 | 3 | 295 | 29 | 323 | 4.94e-119 | 345 |
| MS.gene80715.t1 | AT1G70505 | 58.586 | 297 | 117 | 4 | 3 | 295 | 55 | 349 | 5.88e-119 | 346 |
| MS.gene80715.t1 | AT1G10660 | 56.902 | 297 | 112 | 5 | 3 | 292 | 29 | 316 | 2.53e-109 | 320 |
| MS.gene80715.t1 | AT1G10660 | 56.902 | 297 | 112 | 5 | 3 | 292 | 29 | 316 | 2.53e-109 | 320 |
| MS.gene80715.t1 | AT1G10660 | 56.902 | 297 | 112 | 5 | 3 | 292 | 29 | 316 | 2.53e-109 | 320 |
| MS.gene80715.t1 | AT1G10660 | 56.902 | 297 | 112 | 5 | 3 | 292 | 29 | 316 | 2.53e-109 | 320 |
| MS.gene80715.t1 | AT5G62960 | 48.026 | 304 | 145 | 3 | 3 | 302 | 53 | 347 | 9.99e-100 | 296 |
| MS.gene80715.t1 | AT5G62960 | 46.617 | 266 | 129 | 3 | 3 | 264 | 53 | 309 | 2.69e-83 | 253 |
| MS.gene80715.t1 | AT3G27770 | 41.869 | 289 | 146 | 7 | 7 | 287 | 37 | 311 | 1.92e-73 | 228 |
| MS.gene80715.t1 | AT3G27770 | 43.678 | 261 | 130 | 6 | 39 | 291 | 21 | 272 | 5.89e-70 | 218 |
| MS.gene80715.t1 | AT1G70505 | 52.055 | 219 | 99 | 4 | 3 | 217 | 29 | 245 | 9.89e-69 | 214 |
| MS.gene80715.t1 | AT1G70505 | 52.036 | 221 | 100 | 4 | 3 | 219 | 55 | 273 | 1.47e-67 | 215 |
| MS.gene80715.t1 | AT2G47115 | 39.863 | 291 | 144 | 4 | 17 | 297 | 28 | 297 | 3.02e-59 | 191 |
Find 60 sgRNAs with CRISPR-Local
Find 256 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATTATTCAAATATTATTTC+AGG | 0.227394 | 5.4:-23968639 | MS.gene80715:intron |
| TTAAAGGAATTCATCCTAAT+TGG | 0.227419 | 5.4:-23969643 | MS.gene80715:CDS |
| TGCTCACTGACCTTGTATTC+TGG | 0.268288 | 5.4:-23967157 | MS.gene80715:CDS |
| AATATCCAGACGGAAGTCTT+TGG | 0.329675 | 5.4:+23967109 | None:intergenic |
| GCATGGAATACATGTGTTAA+AGG | 0.347362 | 5.4:-23969659 | MS.gene80715:CDS |
| ATAATGCACATTCCATGTTA+TGG | 0.360858 | 5.4:-23965471 | MS.gene80715:CDS |
| CTGTAAGCAAGCAACCAATT+AGG | 0.371298 | 5.4:+23969629 | None:intergenic |
| CATCACCATATGCACCCTTA+TGG | 0.375914 | 5.4:-23965978 | MS.gene80715:intron |
| GTTAAAGCAACTTCTATAGA+AGG | 0.385635 | 5.4:+23968814 | None:intergenic |
| TATGTGGCTCCAACACTTGA+TGG | 0.408371 | 5.4:-23968746 | MS.gene80715:CDS |
| CTGGTTCTTGTCAGTTTCTA+CGG | 0.409172 | 5.4:-23965395 | MS.gene80715:CDS |
| TTTGGTCACTATTTACTTTG+CGG | 0.416580 | 5.4:-23969076 | MS.gene80715:intron |
| TCCATGCCGTTGTTTCGCTT+TGG | 0.416933 | 5.4:-23966108 | MS.gene80715:intron |
| TTAAATATGCAGACTTGTGC+AGG | 0.421716 | 5.4:-23967188 | MS.gene80715:intron |
| TAAGAGTTCGTATGCCAATC+AGG | 0.423869 | 5.4:-23968699 | MS.gene80715:CDS |
| GAACAGATGGACATTTACTT+TGG | 0.448713 | 5.4:-23969094 | MS.gene80715:intron |
| CTTTAACCACAAGGAATTTG+AGG | 0.453242 | 5.4:-23968798 | MS.gene80715:CDS |
| ACTGCTAATATAGTTGTTGA+TGG | 0.456333 | 5.4:-23969572 | MS.gene80715:CDS |
| ACATACCATAAGGGTGCATA+TGG | 0.457897 | 5.4:+23965973 | None:intergenic |
| GACAAATCAAGGAAAGGATA+AGG | 0.477562 | 5.4:+23966000 | None:intergenic |
| GTTAACGCTGTGCTCCTCCT+TGG | 0.480961 | 5.4:-23966308 | MS.gene80715:CDS |
| TGGTTGTCGAGATTGTTCTC+TGG | 0.487176 | 5.4:-23965414 | MS.gene80715:CDS |
| TTTAACCACAAGGAATTTGA+GGG | 0.490528 | 5.4:-23968797 | MS.gene80715:CDS |
| TCGATTGAGAGATTCCTGAT+TGG | 0.495840 | 5.4:+23968685 | None:intergenic |
| TCGAAATACAGCTGGTGTGT+GGG | 0.497509 | 5.4:-23968666 | MS.gene80715:CDS |
| GGAAGAAGGGCGACGAGAAA+CGG | 0.502040 | 5.4:-23969705 | MS.gene80715:CDS |
| AAGTCTTTGGATGTCATAAA+CGG | 0.506515 | 5.4:+23967122 | None:intergenic |
| ATGTGGCTCCAACACTTGAT+GGG | 0.508289 | 5.4:-23968745 | MS.gene80715:CDS |
| TTCAATTTGCAGTTCACTGT+TGG | 0.508339 | 5.4:-23966341 | MS.gene80715:intron |
| CATATGGTGATGACAAATCA+AGG | 0.512911 | 5.4:+23965989 | None:intergenic |
| GACATCCAAAGACTTCCGTC+TGG | 0.516324 | 5.4:-23967114 | MS.gene80715:CDS |
| GAAATGAGAGGGTGGAAGAA+GGG | 0.524860 | 5.4:-23969718 | MS.gene80715:CDS |
| AAATAACAAGCCAGAATACA+AGG | 0.530867 | 5.4:+23967147 | None:intergenic |
| AGAAATGAGAGGGTGGAAGA+AGG | 0.535700 | 5.4:-23969719 | MS.gene80715:CDS |
| AAATATGCAAATCGAAACAC+TGG | 0.545569 | 5.4:+23966172 | None:intergenic |
| ATCGAAATACAGCTGGTGTG+TGG | 0.547035 | 5.4:-23968667 | MS.gene80715:CDS |
| TCTCTCAATCGAAATACAGC+TGG | 0.561952 | 5.4:-23968674 | MS.gene80715:CDS |
| GAAGGGCGACGAGAAACGGT+TGG | 0.569856 | 5.4:-23969701 | MS.gene80715:CDS |
| AATATAGTTGTTGATGGAGG+TGG | 0.572071 | 5.4:-23969566 | MS.gene80715:CDS |
| TGCTATATGAAGATGAAGCA+TGG | 0.572936 | 5.4:-23969676 | MS.gene80715:CDS |
| CGTTTCCCTCAAATTCCTTG+TGG | 0.579761 | 5.4:+23968792 | None:intergenic |
| AATTTAAGAACATACCATAA+GGG | 0.580153 | 5.4:+23965964 | None:intergenic |
| TCAGAAATCCCATCAAGTGT+TGG | 0.581297 | 5.4:+23968737 | None:intergenic |
| TACGAACTCTTAGATAAGAC+AGG | 0.588267 | 5.4:+23968710 | None:intergenic |
| CGAAATACAGCTGGTGTGTG+GGG | 0.596310 | 5.4:-23968665 | MS.gene80715:CDS |
| GGTGATGACAAATCAAGGAA+AGG | 0.602090 | 5.4:+23965994 | None:intergenic |
| TAGTGAAGTTGAAGCACTTG+TGG | 0.603098 | 5.4:-23965434 | MS.gene80715:CDS |
| TACAGAACGAGGCACTTATG+TGG | 0.604278 | 5.4:-23968762 | MS.gene80715:CDS |
| TCAGTAAATCAAGAAATGAG+AGG | 0.605968 | 5.4:-23969730 | MS.gene80715:CDS |
| CAGTAAATCAAGAAATGAGA+GGG | 0.619640 | 5.4:-23969729 | MS.gene80715:CDS |
| AATGCAAAGAAGCCATAACA+TGG | 0.621242 | 5.4:+23965459 | None:intergenic |
| TAGAAGTTGCTTTAACCACA+AGG | 0.639755 | 5.4:-23968807 | MS.gene80715:CDS |
| TAAATCAAGAAATGAGAGGG+TGG | 0.641595 | 5.4:-23969726 | MS.gene80715:CDS |
| ACCAAAGCGAAACAACGGCA+TGG | 0.646417 | 5.4:+23966107 | None:intergenic |
| CGAAACATCATTGAACTGCA+TGG | 0.659943 | 5.4:-23966285 | MS.gene80715:intron |
| AGTTCAATGATGTTTCGCCA+AGG | 0.672652 | 5.4:+23966291 | None:intergenic |
| TCAATGATGTTTCGCCAAGG+AGG | 0.685866 | 5.4:+23966294 | None:intergenic |
| GCTAATATAGTTGTTGATGG+AGG | 0.698631 | 5.4:-23969569 | MS.gene80715:CDS |
| TTGTACTTACAATATCCAGA+CGG | 0.715608 | 5.4:+23967099 | None:intergenic |
| AACGCATTAGATACAGAACG+AGG | 0.781639 | 5.4:-23968773 | MS.gene80715:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATTATTCAAATATTATTTC+AGG | - | chr5.4:23966523-23966542 | MS.gene80715:intron | 10.0% |
| !!! | TCATTTTTAAAAAATATAAC+TGG | + | chr5.4:23969502-23969521 | None:intergenic | 10.0% |
| !!! | TTTTTTAAAAATGAATGTTA+TGG | - | chr5.4:23969508-23969527 | MS.gene80715:intron | 10.0% |
| !! | AAATATATGTCAAATATTAG+AGG | + | chr5.4:23969271-23969290 | None:intergenic | 15.0% |
| !! | TATATAATATAACACGTTAA+AGG | - | chr5.4:23967194-23967213 | MS.gene80715:intron | 15.0% |
| !!! | AAATTTAAAGTAGATAATTG+AGG | + | chr5.4:23968937-23968956 | None:intergenic | 15.0% |
| !!! | AAGCATATTATTTTTAAATC+TGG | - | chr5.4:23967735-23967754 | MS.gene80715:intron | 15.0% |
| !!! | AATTGTTTTATTGATTGAAA+AGG | - | chr5.4:23966801-23966820 | MS.gene80715:intron | 15.0% |
| !!! | AATTTTATTGTGTTATTAAC+TGG | - | chr5.4:23967910-23967929 | MS.gene80715:intron | 15.0% |
| !!! | AATTTTCAATTAGAACTTAA+AGG | + | chr5.4:23966909-23966928 | None:intergenic | 15.0% |
| !!! | AGCATATTATTTTTAAATCT+GGG | - | chr5.4:23967736-23967755 | MS.gene80715:intron | 15.0% |
| !!! | ATTACTCTTATTGATTTTAT+TGG | - | chr5.4:23966549-23966568 | MS.gene80715:intron | 15.0% |
| !!! | ATTTCTTCTTTTCTTTAATT+TGG | + | chr5.4:23966784-23966803 | None:intergenic | 15.0% |
| !!! | ATTTTTTAACATTTTGTTAC+AGG | - | chr5.4:23969136-23969155 | MS.gene80715:intron | 15.0% |
| !!! | TTTCTTCTTTTCTTTAATTT+GGG | + | chr5.4:23966783-23966802 | None:intergenic | 15.0% |
| !! | AAATTGGATATAATTGAAGA+TGG | - | chr5.4:23966726-23966745 | MS.gene80715:intron | 20.0% |
| !! | AATAGTATTTGATCAAATCA+TGG | - | chr5.4:23967419-23967438 | MS.gene80715:intron | 20.0% |
| !! | AATTTAAGAACATACCATAA+GGG | + | chr5.4:23969201-23969220 | None:intergenic | 20.0% |
| !! | ATGATATCAATTTCAAAATG+CGG | - | chr5.4:23965774-23965793 | MS.gene80715:intron | 20.0% |
| !! | CAGCATATTTATAACAAAAA+GGG | + | chr5.4:23966024-23966043 | None:intergenic | 20.0% |
| !! | TAACCAATGAAATTGTTTAT+TGG | + | chr5.4:23965937-23965956 | None:intergenic | 20.0% |
| !! | TATGTGCATACATTTAATTA+GGG | + | chr5.4:23968243-23968262 | None:intergenic | 20.0% |
| !! | TCAGCATATTTATAACAAAA+AGG | + | chr5.4:23966025-23966044 | None:intergenic | 20.0% |
| !! | TGCATGAAATTTGTAATTAA+TGG | - | chr5.4:23968639-23968658 | MS.gene80715:intron | 20.0% |
| !!! | AATAACGGTTTGTTAAAATT+TGG | + | chr5.4:23967492-23967511 | None:intergenic | 20.0% |
| !!! | AATTTCTTTTTTTGTGCTTT+TGG | - | chr5.4:23965559-23965578 | MS.gene80715:intron | 20.0% |
| !!! | ACCACATTTTTCATAAAATT+AGG | - | chr5.4:23967378-23967397 | MS.gene80715:intron | 20.0% |
| !!! | ACCTAATTTTATGAAAAATG+TGG | + | chr5.4:23967382-23967401 | None:intergenic | 20.0% |
| !!! | ACTGATTAGATAAAGTTTTT+GGG | - | chr5.4:23968143-23968162 | MS.gene80715:intron | 20.0% |
| !!! | AGAATTGATTTTAACATGTT+TGG | + | chr5.4:23968467-23968486 | None:intergenic | 20.0% |
| !!! | ATTAGTTTTGTGAAAGAAAT+TGG | - | chr5.4:23966710-23966729 | MS.gene80715:intron | 20.0% |
| !!! | ATTTCTTTTTTTGTGCTTTT+GGG | - | chr5.4:23965560-23965579 | MS.gene80715:intron | 20.0% |
| !!! | TACTGATTAGATAAAGTTTT+TGG | - | chr5.4:23968142-23968161 | MS.gene80715:intron | 20.0% |
| !!! | TCATTAACTTTTCATCATTA+AGG | + | chr5.4:23968684-23968703 | None:intergenic | 20.0% |
| !!! | TGATTTTGTGAAATTGATTA+TGG | - | chr5.4:23968298-23968317 | MS.gene80715:intron | 20.0% |
| !!! | TTCAAGTATAACTTTTGTTT+AGG | - | chr5.4:23966654-23966673 | MS.gene80715:intron | 20.0% |
| ! | AAAAGCAATAGAAAGAAGAT+GGG | + | chr5.4:23969093-23969112 | None:intergenic | 25.0% |
| ! | AAACATACATGAAAACTGTT+TGG | - | chr5.4:23968530-23968549 | MS.gene80715:intron | 25.0% |
| ! | AAAGGAGATATGTTATAGAA+AGG | - | chr5.4:23966819-23966838 | MS.gene80715:intron | 25.0% |
| ! | AAGACAGCAATATATTATAC+AGG | + | chr5.4:23965663-23965682 | None:intergenic | 25.0% |
| ! | ACTTTGCCAAGAAATTTAAT+TGG | - | chr5.4:23967635-23967654 | MS.gene80715:intron | 25.0% |
| ! | CAATTAGAACTTAAAGGTTT+GGG | + | chr5.4:23966903-23966922 | None:intergenic | 25.0% |
| ! | CATACATTTAATTAGGGATT+AGG | + | chr5.4:23968237-23968256 | None:intergenic | 25.0% |
| ! | CTAACAAAAGATATGTAGAT+TGG | - | chr5.4:23967059-23967078 | MS.gene80715:intron | 25.0% |
| ! | CTATGTGCATACATTTAATT+AGG | + | chr5.4:23968244-23968263 | None:intergenic | 25.0% |
| ! | GAAATTGATTATGGCTAAAA+GGG | - | chr5.4:23968307-23968326 | MS.gene80715:intron | 25.0% |
| ! | GAATTTAAGAACATACCATA+AGG | + | chr5.4:23969202-23969221 | None:intergenic | 25.0% |
| ! | GTTATTAACTGGTTAAACTT+GGG | - | chr5.4:23967921-23967940 | MS.gene80715:intron | 25.0% |
| ! | TACATATTATGTTATGGTCT+AGG | - | chr5.4:23969342-23969361 | MS.gene80715:intron | 25.0% |
| ! | TAGATTGGAGAGAAAAAAAT+GGG | - | chr5.4:23967074-23967093 | MS.gene80715:intron | 25.0% |
| ! | TCAATTAGAACTTAAAGGTT+TGG | + | chr5.4:23966904-23966923 | None:intergenic | 25.0% |
| ! | TGAAATTGATTATGGCTAAA+AGG | - | chr5.4:23968306-23968325 | MS.gene80715:intron | 25.0% |
| ! | TGGTAGTACATATTATGTTA+TGG | - | chr5.4:23969336-23969355 | MS.gene80715:intron | 25.0% |
| ! | TGTTATTAACTGGTTAAACT+TGG | - | chr5.4:23967920-23967939 | MS.gene80715:intron | 25.0% |
| ! | TTAAAGGAATTCATCCTAAT+TGG | - | chr5.4:23965519-23965538 | MS.gene80715:intron | 25.0% |
| ! | TTCTGACCAATTAAATTTCT+TGG | + | chr5.4:23967644-23967663 | None:intergenic | 25.0% |
| !! | CTGATTAGATAAAGTTTTTG+GGG | - | chr5.4:23968144-23968163 | MS.gene80715:intron | 25.0% |
| !! | GATTTGCATATTTTATCTTG+TGG | - | chr5.4:23969000-23969019 | MS.gene80715:intron | 25.0% |
| !! | TATCTTATCTATTGCTGATT+CGG | - | chr5.4:23969432-23969451 | MS.gene80715:intron | 25.0% |
| !! | TTTTAACATTTTGTTACAGG+TGG | - | chr5.4:23969139-23969158 | MS.gene80715:intron | 25.0% |
| !!! | AGGTTTTAACTAGCTTTTTA+AGG | - | chr5.4:23967214-23967233 | MS.gene80715:intron | 25.0% |
| !!! | ATCTTCTTTCTATTGCTTTT+CGG | - | chr5.4:23969093-23969112 | MS.gene80715:intron | 25.0% |
| !!! | GGTAATTTTTTTCTTTTGCA+TGG | + | chr5.4:23969250-23969269 | None:intergenic | 25.0% |
| !!! | TGCGTTTTTTTCATCTTTTT+GGG | - | chr5.4:23966150-23966169 | MS.gene80715:CDS | 25.0% |
| !!! | TGTTCGAATTTTTTGGTATA+TGG | + | chr5.4:23969551-23969570 | None:intergenic | 25.0% |
| !!! | TTGCGTTTTTTTCATCTTTT+TGG | - | chr5.4:23966149-23966168 | MS.gene80715:CDS | 25.0% |
| AAAAGTTTGTCTGTTTGAGA+CGG | - | chr5.4:23967139-23967158 | MS.gene80715:CDS | 30.0% | |
| AAATAACAAGCCAGAATACA+AGG | + | chr5.4:23968018-23968037 | None:intergenic | 30.0% | |
| AAATATGCAAATCGAAACAC+TGG | + | chr5.4:23968993-23969012 | None:intergenic | 30.0% | |
| AACAAGAAATTCAACAAAGC+TGG | + | chr5.4:23967313-23967332 | None:intergenic | 30.0% | |
| AAGTCTTTGGATGTCATAAA+CGG | + | chr5.4:23968043-23968062 | None:intergenic | 30.0% | |
| AAGTTAATGAAGATGCAGAA+AGG | - | chr5.4:23968694-23968713 | MS.gene80715:CDS | 30.0% | |
| ACTGCTAATATAGTTGTTGA+TGG | - | chr5.4:23965590-23965609 | MS.gene80715:intron | 30.0% | |
| AGAATCAACAGAAAAAGAAG+AGG | - | chr5.4:23968202-23968221 | MS.gene80715:intron | 30.0% | |
| AGTAAGTAACTAAACTTCCA+AGG | - | chr5.4:23965733-23965752 | MS.gene80715:intron | 30.0% | |
| ATAATGCACATTCCATGTTA+TGG | - | chr5.4:23969691-23969710 | MS.gene80715:CDS | 30.0% | |
| CAATGAAATTGTTTATTGGC+TGG | + | chr5.4:23965933-23965952 | None:intergenic | 30.0% | |
| CACATAGTTTCATTCTTGTT+TGG | - | chr5.4:23968257-23968276 | MS.gene80715:intron | 30.0% | |
| CAGCCAATAAACAATTTCAT+TGG | - | chr5.4:23965931-23965950 | MS.gene80715:intron | 30.0% | |
| CAGTAAATCAAGAAATGAGA+GGG | - | chr5.4:23965433-23965452 | MS.gene80715:CDS | 30.0% | |
| GAAAAACAAAGTCGATTAAC+AGG | + | chr5.4:23966257-23966276 | None:intergenic | 30.0% | |
| GAAAAGCAATAGAAAGAAGA+TGG | + | chr5.4:23969094-23969113 | None:intergenic | 30.0% | |
| GAGATTGAATTCATAACCAA+TGG | + | chr5.4:23969587-23969606 | None:intergenic | 30.0% | |
| GCATACAAATTTATGAACCT+TGG | + | chr5.4:23965753-23965772 | None:intergenic | 30.0% | |
| GCCTAAAAATCAAATTGTAG+AGG | - | chr5.4:23968394-23968413 | MS.gene80715:intron | 30.0% | |
| GCTGAAATTGAAATTAAGAG+TGG | + | chr5.4:23966313-23966332 | None:intergenic | 30.0% | |
| GGTATGTTCTTAAATTCCAT+TGG | - | chr5.4:23969205-23969224 | MS.gene80715:intron | 30.0% | |
| GGTCTTTATTACAAACAAGA+GGG | + | chr5.4:23967361-23967380 | None:intergenic | 30.0% | |
| GTAGATTGGAGAGAAAAAAA+TGG | - | chr5.4:23967073-23967092 | MS.gene80715:intron | 30.0% | |
| GTTAAAGCAACTTCTATAGA+AGG | + | chr5.4:23966351-23966370 | None:intergenic | 30.0% | |
| TATCAATTTCAAAATGCGGA+CGG | - | chr5.4:23965778-23965797 | MS.gene80715:intron | 30.0% | |
| TATGTTCATATACTCCATAG+AGG | - | chr5.4:23966220-23966239 | MS.gene80715:intron | 30.0% | |
| TCAGTAAATCAAGAAATGAG+AGG | - | chr5.4:23965432-23965451 | MS.gene80715:CDS | 30.0% | |
| TGAAAGAGATAAAAGCTGAT+AGG | - | chr5.4:23966755-23966774 | MS.gene80715:intron | 30.0% | |
| TGAGGAGAAATATAAGCAAA+AGG | + | chr5.4:23968919-23968938 | None:intergenic | 30.0% | |
| TGCATATTGCAGAACAATAA+CGG | + | chr5.4:23967507-23967526 | None:intergenic | 30.0% | |
| TGGTCTTTATTACAAACAAG+AGG | + | chr5.4:23967362-23967381 | None:intergenic | 30.0% | |
| TGTGATTTCTTCATTTGGTT+GGG | - | chr5.4:23968104-23968123 | MS.gene80715:intron | 30.0% | |
| TTGTACTTACAATATCCAGA+CGG | + | chr5.4:23968066-23968085 | None:intergenic | 30.0% | |
| TTTAACCACAAGGAATTTGA+GGG | - | chr5.4:23966365-23966384 | MS.gene80715:intron | 30.0% | |
| TTTGGTCACTATTTACTTTG+CGG | - | chr5.4:23966086-23966105 | MS.gene80715:intron | 30.0% | |
| ! | CATATCTTTTGTTAGAAACC+CGG | + | chr5.4:23967054-23967073 | None:intergenic | 30.0% |
| ! | TATCAGCTTTTATCTCTTTC+AGG | + | chr5.4:23966756-23966775 | None:intergenic | 30.0% |
| ! | TGCATATTTTATCTTGTGGA+CGG | - | chr5.4:23969004-23969023 | MS.gene80715:intron | 30.0% |
| !! | ATCTTATCTATTGCTGATTC+GGG | - | chr5.4:23969433-23969452 | MS.gene80715:intron | 30.0% |
| !! | CTACATTTGTGATTTTTCAG+TGG | - | chr5.4:23969027-23969046 | MS.gene80715:intron | 30.0% |
| !! | GCCTCTACAATTTGATTTTT+AGG | + | chr5.4:23968398-23968417 | None:intergenic | 30.0% |
| !! | GCTTAGGATCATTTTTGATA+TGG | - | chr5.4:23965396-23965415 | MS.gene80715:CDS | 30.0% |
| !! | TCAGTTCTAAAAGAACATGT+CGG | - | chr5.4:23968753-23968772 | MS.gene80715:CDS | 30.0% |
| !!! | CACATTGAAACTTTTTTGAC+TGG | - | chr5.4:23969316-23969335 | MS.gene80715:intron | 30.0% |
| !!! | CGTTTTTTTCATCTTTTTGG+GGG | - | chr5.4:23966152-23966171 | MS.gene80715:CDS | 30.0% |
| !!! | GCGTTTTTTTCATCTTTTTG+GGG | - | chr5.4:23966151-23966170 | MS.gene80715:CDS | 30.0% |
| !!! | GTTTTTTTCATCTTTTTGGG+GGG | - | chr5.4:23966153-23966172 | MS.gene80715:CDS | 30.0% |
| !!! | TCGAATTTTTTGGTATATGG+TGG | + | chr5.4:23969548-23969567 | None:intergenic | 30.0% |
| !!! | TTCATTCTTGTTTGGTTTTG+CGG | - | chr5.4:23968265-23968284 | MS.gene80715:intron | 30.0% |
| AAAAATTCGAACACACCCTA+AGG | - | chr5.4:23969558-23969577 | MS.gene80715:CDS | 35.0% | |
| AAGCACAAATGCTTTCATGT+TGG | + | chr5.4:23968592-23968611 | None:intergenic | 35.0% | |
| AAGTAAATGTCCATCTGTTC+AGG | + | chr5.4:23966068-23966087 | None:intergenic | 35.0% | |
| AAGTGTGCTAAATAAGGAGT+CGG | + | chr5.4:23967013-23967032 | None:intergenic | 35.0% | |
| AATGCAAAGAAGCCATAACA+TGG | + | chr5.4:23969706-23969725 | None:intergenic | 35.0% | |
| AGAGAGTTAGAGAAGTGAAA+TGG | + | chr5.4:23966114-23966133 | None:intergenic | 35.0% | |
| ATGTTTGGATCGGTGATATA+GGG | - | chr5.4:23969457-23969476 | MS.gene80715:intron | 35.0% | |
| ATTAACTGGTTAAACTTGGG+AGG | - | chr5.4:23967924-23967943 | MS.gene80715:intron | 35.0% | |
| CAAACACGTAATTGAGAATG+TGG | - | chr5.4:23965874-23965893 | MS.gene80715:intron | 35.0% | |
| CAACCAAATGAAGAAATCAC+AGG | + | chr5.4:23968105-23968124 | None:intergenic | 35.0% | |
| CATACATGAAAACTGTTTGG+AGG | - | chr5.4:23968533-23968552 | MS.gene80715:intron | 35.0% | |
| CATTCTCAATTACGTGTTTG+TGG | + | chr5.4:23965874-23965893 | None:intergenic | 35.0% | |
| CTCTTCACACAAATAGTTAC+AGG | + | chr5.4:23967685-23967704 | None:intergenic | 35.0% | |
| CTGTGATTTCTTCATTTGGT+TGG | - | chr5.4:23968103-23968122 | MS.gene80715:intron | 35.0% | |
| CTTTAACCACAAGGAATTTG+AGG | - | chr5.4:23966364-23966383 | MS.gene80715:intron | 35.0% | |
| GAACAGATGGACATTTACTT+TGG | - | chr5.4:23966068-23966087 | MS.gene80715:intron | 35.0% | |
| GACAAATCAAGGAAAGGATA+AGG | + | chr5.4:23969165-23969184 | None:intergenic | 35.0% | |
| GCATGGAATACATGTGTTAA+AGG | - | chr5.4:23965503-23965522 | MS.gene80715:intron | 35.0% | |
| GCTATAGTACTTTAGTGTAG+CGG | + | chr5.4:23965816-23965835 | None:intergenic | 35.0% | |
| GCTATTATTTCATGGCATTG+TGG | + | chr5.4:23965840-23965859 | None:intergenic | 35.0% | |
| GGATGTGAAGTAGTTATGTT+TGG | - | chr5.4:23968333-23968352 | MS.gene80715:intron | 35.0% | |
| GTAACAGAGAGACTGAATAA+TGG | + | chr5.4:23967806-23967825 | None:intergenic | 35.0% | |
| TAAATCAAGAAATGAGAGGG+TGG | - | chr5.4:23965436-23965455 | MS.gene80715:CDS | 35.0% | |
| TACCTAAAAGTCCAACAAGA+TGG | + | chr5.4:23969658-23969677 | None:intergenic | 35.0% | |
| TACGAACTCTTAGATAAGAC+AGG | + | chr5.4:23966455-23966474 | None:intergenic | 35.0% | |
| TATGTTTGGATCGGTGATAT+AGG | - | chr5.4:23969456-23969475 | MS.gene80715:intron | 35.0% | |
| TCAGGAGCCAAAAAAAGAAA+GGG | + | chr5.4:23966050-23966069 | None:intergenic | 35.0% | |
| TGATATAGGGTGGAATGAAA+TGG | - | chr5.4:23969470-23969489 | MS.gene80715:intron | 35.0% | |
| TGATTATGGCTAAAAGGGAT+TGG | - | chr5.4:23968312-23968331 | MS.gene80715:intron | 35.0% | |
| TGCATGGTGTATTTGAGTAT+TGG | + | chr5.4:23969234-23969253 | None:intergenic | 35.0% | |
| TGCTATATGAAGATGAAGCA+TGG | - | chr5.4:23965486-23965505 | MS.gene80715:CDS | 35.0% | |
| TGTTGACAAAGACTCAAAGT+TGG | + | chr5.4:23966620-23966639 | None:intergenic | 35.0% | |
| TTAAATATGCAGACTTGTGC+AGG | - | chr5.4:23967974-23967993 | MS.gene80715:intron | 35.0% | |
| TTCAATTTGCAGTTCACTGT+TGG | - | chr5.4:23968821-23968840 | MS.gene80715:CDS | 35.0% | |
| TTCAGGAGCCAAAAAAAGAA+AGG | + | chr5.4:23966051-23966070 | None:intergenic | 35.0% | |
| ! | AATATAGTTGTTGATGGAGG+TGG | - | chr5.4:23965596-23965615 | MS.gene80715:intron | 35.0% |
| ! | AGAGGGAAAGTACAACTAAA+AGG | + | chr5.4:23967344-23967363 | None:intergenic | 35.0% |
| ! | CATATGGTGATGACAAATCA+AGG | + | chr5.4:23969176-23969195 | None:intergenic | 35.0% |
| ! | CCTTATTTAGCACACTTGTT+GGG | - | chr5.4:23967016-23967035 | MS.gene80715:intron | 35.0% |
| ! | CTAGTTGTTACTTACAGTAC+TGG | - | chr5.4:23967261-23967280 | MS.gene80715:intron | 35.0% |
| ! | GATAATTAGTCTCTTCTCTG+AGG | + | chr5.4:23966874-23966893 | None:intergenic | 35.0% |
| ! | GCTAATATAGTTGTTGATGG+AGG | - | chr5.4:23965593-23965612 | MS.gene80715:intron | 35.0% |
| ! | GTTTTACCAAAGCGAAACAA+CGG | + | chr5.4:23969063-23969082 | None:intergenic | 35.0% |
| ! | TAGAAGTTGCTTTAACCACA+AGG | - | chr5.4:23966355-23966374 | MS.gene80715:intron | 35.0% |
| ! | TCCTTATTTAGCACACTTGT+TGG | - | chr5.4:23967015-23967034 | MS.gene80715:intron | 35.0% |
| ! | TGGTATATGGTGGAATGAAA+TGG | + | chr5.4:23969538-23969557 | None:intergenic | 35.0% |
| ! | TGTATGTTTGCTTCCACTTT+TGG | + | chr5.4:23968519-23968538 | None:intergenic | 35.0% |
| ! | TGTCGTGTGCTATTATTTCA+TGG | + | chr5.4:23965848-23965867 | None:intergenic | 35.0% |
| ! | TGTTTATTGGCTGGAAAACA+CGG | + | chr5.4:23965924-23965943 | None:intergenic | 35.0% |
| ! | TTTACTCTGTTTGAAAGCGT+GGG | - | chr5.4:23967167-23967186 | MS.gene80715:CDS | 35.0% |
| !! | ATTTGAGTATTGGTGACCAA+TGG | + | chr5.4:23969224-23969243 | None:intergenic | 35.0% |
| !! | GTATGTTTGCTTCCACTTTT+GGG | + | chr5.4:23968518-23968537 | None:intergenic | 35.0% |
| !! | TAAAGTTTTTGGGGACTGTT+CGG | - | chr5.4:23968153-23968172 | MS.gene80715:intron | 35.0% |
| !! | TATGTTTGCTTCCACTTTTG+GGG | + | chr5.4:23968517-23968536 | None:intergenic | 35.0% |
| !! | TCTTTCTATTGCTTTTCGGT+TGG | - | chr5.4:23969097-23969116 | MS.gene80715:intron | 35.0% |
| !! | TTGTTGGACTTTTAGGTACT+TGG | - | chr5.4:23969660-23969679 | MS.gene80715:CDS | 35.0% |
| !!! | GCTGATTCCCTTTCTTTTTT+TGG | - | chr5.4:23966040-23966059 | MS.gene80715:intron | 35.0% |
| !!! | TAGGGTGTGTTCGAATTTTT+TGG | + | chr5.4:23969558-23969577 | None:intergenic | 35.0% |
| AAATGAAGAAATCACAGGCC+AGG | + | chr5.4:23968100-23968119 | None:intergenic | 40.0% | |
| AACGCATTAGATACAGAACG+AGG | - | chr5.4:23966389-23966408 | MS.gene80715:intron | 40.0% | |
| AATATCCAGACGGAAGTCTT+TGG | + | chr5.4:23968056-23968075 | None:intergenic | 40.0% | |
| AATGAAGAAATCACAGGCCA+GGG | + | chr5.4:23968099-23968118 | None:intergenic | 40.0% | |
| ACAGGACTTTCTGATCTAGA+AGG | + | chr5.4:23967667-23967686 | None:intergenic | 40.0% | |
| AGAACCGTCAATATACGAAG+AGG | + | chr5.4:23966957-23966976 | None:intergenic | 40.0% | |
| AGGTTCATCAGTTTCCTCTA+TGG | + | chr5.4:23966237-23966256 | None:intergenic | 40.0% | |
| AGTACAACTGATCTTATCCC+TGG | - | chr5.4:23968079-23968098 | MS.gene80715:intron | 40.0% | |
| AGTTCAATGATGTTTCGCCA+AGG | + | chr5.4:23968874-23968893 | None:intergenic | 40.0% | |
| ATGCCCTCTTCGTATATTGA+CGG | - | chr5.4:23966950-23966969 | MS.gene80715:intron | 40.0% | |
| CATAACCAATGGTTGCCTTA+GGG | + | chr5.4:23969576-23969595 | None:intergenic | 40.0% | |
| CCCAACAAGTGTGCTAAATA+AGG | + | chr5.4:23967019-23967038 | None:intergenic | 40.0% | |
| CGAAACATCATTGAACTGCA+TGG | - | chr5.4:23968877-23968896 | MS.gene80715:intron | 40.0% | |
| CTGTAAGCAAGCAACCAATT+AGG | + | chr5.4:23965536-23965555 | None:intergenic | 40.0% | |
| CTTTACTCTGTTTGAAAGCG+TGG | - | chr5.4:23967166-23967185 | MS.gene80715:CDS | 40.0% | |
| GAACCGTCAATATACGAAGA+GGG | + | chr5.4:23966956-23966975 | None:intergenic | 40.0% | |
| GAAGATGCAGAAAGGTGAAT+AGG | - | chr5.4:23968702-23968721 | MS.gene80715:CDS | 40.0% | |
| GGTGATGACAAATCAAGGAA+AGG | + | chr5.4:23969171-23969190 | None:intergenic | 40.0% | |
| GTGTTGTAAATCGCAGATAG+CGG | + | chr5.4:23967617-23967636 | None:intergenic | 40.0% | |
| TAAGAGTTCGTATGCCAATC+AGG | - | chr5.4:23966463-23966482 | MS.gene80715:intron | 40.0% | |
| TCAGAAATCCCATCAAGTGT+TGG | + | chr5.4:23966428-23966447 | None:intergenic | 40.0% | |
| TCATAACCAATGGTTGCCTT+AGG | + | chr5.4:23969577-23969596 | None:intergenic | 40.0% | |
| TCGATTGAGAGATTCCTGAT+TGG | + | chr5.4:23966480-23966499 | None:intergenic | 40.0% | |
| TCTCTCAATCGAAATACAGC+TGG | - | chr5.4:23966488-23966507 | MS.gene80715:intron | 40.0% | |
| TGGCCTGTGATTTCTTCATT+TGG | - | chr5.4:23968099-23968118 | MS.gene80715:intron | 40.0% | |
| TTTATTACCTCCCCCAAAAG+TGG | - | chr5.4:23968503-23968522 | MS.gene80715:intron | 40.0% | |
| ! | AATGACCAGTAGTTTGCAGA+AGG | - | chr5.4:23967780-23967799 | MS.gene80715:intron | 40.0% |
| ! | ACATACCATAAGGGTGCATA+TGG | + | chr5.4:23969192-23969211 | None:intergenic | 40.0% |
| ! | CTGGTTCTTGTCAGTTTCTA+CGG | - | chr5.4:23969767-23969786 | MS.gene80715:CDS | 40.0% |
| ! | GTCGGTTACATTTGCTAATC+TGG | + | chr5.4:23966995-23967014 | None:intergenic | 40.0% |
| ! | TAGTGAAGTTGAAGCACTTG+TGG | - | chr5.4:23969728-23969747 | MS.gene80715:CDS | 40.0% |
| ! | TGATTCGGGTATGTTTGGAT+CGG | - | chr5.4:23969447-23969466 | MS.gene80715:intron | 40.0% |
| ! | TGCCATCTTGTTGGACTTTT+AGG | - | chr5.4:23969653-23969672 | MS.gene80715:CDS | 40.0% |
| !! | ACTTTTAGGTACTTGGCTGT+TGG | - | chr5.4:23969667-23969686 | MS.gene80715:CDS | 40.0% |
| !! | AGATAGCGGAAGGAAAAAAG+TGG | + | chr5.4:23967603-23967622 | None:intergenic | 40.0% |
| !! | ATGTTTGCTTCCACTTTTGG+GGG | + | chr5.4:23968516-23968535 | None:intergenic | 40.0% |
| !! | ATTGCTGATTCGGGTATGTT+TGG | - | chr5.4:23969442-23969461 | MS.gene80715:intron | 40.0% |
| !! | CAAGTTTGTTGCCATCTTGT+TGG | - | chr5.4:23969644-23969663 | MS.gene80715:CDS | 40.0% |
| !! | CTAATCTGGCAAGTTTGTTG+AGG | + | chr5.4:23966981-23967000 | None:intergenic | 40.0% |
| !! | TTTCATCTTTTTGGGGGGTA+GGG | - | chr5.4:23966158-23966177 | MS.gene80715:CDS | 40.0% |
| !! | TTTTCATCTTTTTGGGGGGT+AGG | - | chr5.4:23966157-23966176 | MS.gene80715:CDS | 40.0% |
| !!! | TTTTTTGGCTCCTGAACAGA+TGG | - | chr5.4:23966055-23966074 | MS.gene80715:intron | 40.0% |
| AATGGCCTTCTGCAAACTAC+TGG | + | chr5.4:23967788-23967807 | None:intergenic | 45.0% | |
| AGAAATGAGAGGGTGGAAGA+AGG | - | chr5.4:23965443-23965462 | MS.gene80715:CDS | 45.0% | |
| AGTCGTGATCTAGGGATACA+AGG | + | chr5.4:23966851-23966870 | None:intergenic | 45.0% | |
| ATCGAAATACAGCTGGTGTG+TGG | - | chr5.4:23966495-23966514 | MS.gene80715:intron | 45.0% | |
| ATGTGGCTCCAACACTTGAT+GGG | - | chr5.4:23966417-23966436 | MS.gene80715:intron | 45.0% | |
| CAGTAGTCAATGTCTAGCAC+AGG | + | chr5.4:23968621-23968640 | None:intergenic | 45.0% | |
| CATCACCATATGCACCCTTA+TGG | - | chr5.4:23969184-23969203 | MS.gene80715:intron | 45.0% | |
| CGTTTCCCTCAAATTCCTTG+TGG | + | chr5.4:23966373-23966392 | None:intergenic | 45.0% | |
| CTGGCTGTATACTCTCTCTT+TGG | - | chr5.4:23967280-23967299 | MS.gene80715:intron | 45.0% | |
| GAAATGAGAGGGTGGAAGAA+GGG | - | chr5.4:23965444-23965463 | MS.gene80715:CDS | 45.0% | |
| GAGTGGAAGTCACTTAGAGA+AGG | + | chr5.4:23966296-23966315 | None:intergenic | 45.0% | |
| GTCAATATACGAAGAGGGCA+TGG | + | chr5.4:23966951-23966970 | None:intergenic | 45.0% | |
| TAGTCAATGTCTAGCACAGG+CGG | + | chr5.4:23968618-23968637 | None:intergenic | 45.0% | |
| TATGTGGCTCCAACACTTGA+TGG | - | chr5.4:23966416-23966435 | MS.gene80715:intron | 45.0% | |
| TCAATGATGTTTCGCCAAGG+AGG | + | chr5.4:23968871-23968890 | None:intergenic | 45.0% | |
| TCGAAATACAGCTGGTGTGT+GGG | - | chr5.4:23966496-23966515 | MS.gene80715:intron | 45.0% | |
| TGCTCACTGACCTTGTATTC+TGG | - | chr5.4:23968005-23968024 | MS.gene80715:intron | 45.0% | |
| TGGTTGTCGAGATTGTTCTC+TGG | - | chr5.4:23969748-23969767 | MS.gene80715:CDS | 45.0% | |
| TTTGGATCGGTGATATAGGG+TGG | - | chr5.4:23969460-23969479 | MS.gene80715:intron | 45.0% | |
| ! | TACAGAACGAGGCACTTATG+TGG | - | chr5.4:23966400-23966419 | MS.gene80715:intron | 45.0% |
| ! | TTAGCACACTTGTTGGGCTT+AGG | - | chr5.4:23967022-23967041 | MS.gene80715:intron | 45.0% |
| !! | TGTAAATCGCAGATAGCGGA+AGG | + | chr5.4:23967613-23967632 | None:intergenic | 45.0% |
| ACACACCCTAAGGCAACCAT+TGG | - | chr5.4:23969568-23969587 | MS.gene80715:CDS | 50.0% | |
| ACCAAAGCGAAACAACGGCA+TGG | + | chr5.4:23969058-23969077 | None:intergenic | 50.0% | |
| AGTCAATGTCTAGCACAGGC+GGG | + | chr5.4:23968617-23968636 | None:intergenic | 50.0% | |
| CGAAATACAGCTGGTGTGTG+GGG | - | chr5.4:23966497-23966516 | MS.gene80715:intron | 50.0% | |
| GACATCCAAAGACTTCCGTC+TGG | - | chr5.4:23968048-23968067 | MS.gene80715:intron | 50.0% | |
| ! | ATACGAAGAGGGCATGGTGA+AGG | + | chr5.4:23966945-23966964 | None:intergenic | 50.0% |
| ! | CTCTGAGGAGTCGTGATCTA+GGG | + | chr5.4:23966859-23966878 | None:intergenic | 50.0% |
| ! | TACGAAGAGGGCATGGTGAA+GGG | + | chr5.4:23966944-23966963 | None:intergenic | 50.0% |
| ! | TCCATGCCGTTGTTTCGCTT+TGG | - | chr5.4:23969054-23969073 | MS.gene80715:intron | 50.0% |
| ! | TCTCTGAGGAGTCGTGATCT+AGG | + | chr5.4:23966860-23966879 | None:intergenic | 50.0% |
| !! | TTTGCTTCCACTTTTGGGGG+AGG | + | chr5.4:23968513-23968532 | None:intergenic | 50.0% |
| GGAAGAAGGGCGACGAGAAA+CGG | - | chr5.4:23965457-23965476 | MS.gene80715:CDS | 55.0% | |
| GTTAACGCTGTGCTCCTCCT+TGG | - | chr5.4:23968854-23968873 | MS.gene80715:intron | 55.0% | |
| TGTTGGGCTTAGGCACAAGC+CGG | - | chr5.4:23967032-23967051 | MS.gene80715:intron | 55.0% | |
| TTGGGGGGTAGGGTGGAATT+TGG | - | chr5.4:23966168-23966187 | MS.gene80715:CDS | 55.0% | |
| !! | CATCTTTTTGGGGGGTAGGG+TGG | - | chr5.4:23966161-23966180 | MS.gene80715:CDS | 55.0% |
| GAAGGGCGACGAGAAACGGT+TGG | - | chr5.4:23965461-23965480 | MS.gene80715:CDS | 60.0% | |
| GTTGGGCTTAGGCACAAGCC+GGG | - | chr5.4:23967033-23967052 | MS.gene80715:intron | 60.0% | |
| ! | GAAGAGGGCATGGTGAAGGG+AGG | + | chr5.4:23966941-23966960 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 23965392 | 23969792 | 23965392 | ID=MS.gene80715 |
| chr5.4 | mRNA | 23965392 | 23969792 | 23965392 | ID=MS.gene80715.t1;Parent=MS.gene80715 |
| chr5.4 | exon | 23969545 | 23969792 | 23969545 | ID=MS.gene80715.t1.exon1;Parent=MS.gene80715.t1 |
| chr5.4 | CDS | 23969545 | 23969792 | 23969545 | ID=cds.MS.gene80715.t1;Parent=MS.gene80715.t1 |
| chr5.4 | exon | 23969077 | 23969110 | 23969077 | ID=MS.gene80715.t1.exon2;Parent=MS.gene80715.t1 |
| chr5.4 | CDS | 23969077 | 23969110 | 23969077 | ID=cds.MS.gene80715.t1;Parent=MS.gene80715.t1 |
| chr5.4 | exon | 23968640 | 23968852 | 23968640 | ID=MS.gene80715.t1.exon3;Parent=MS.gene80715.t1 |
| chr5.4 | CDS | 23968640 | 23968852 | 23968640 | ID=cds.MS.gene80715.t1;Parent=MS.gene80715.t1 |
| chr5.4 | exon | 23967109 | 23967198 | 23967109 | ID=MS.gene80715.t1.exon4;Parent=MS.gene80715.t1 |
| chr5.4 | CDS | 23967109 | 23967198 | 23967109 | ID=cds.MS.gene80715.t1;Parent=MS.gene80715.t1 |
| chr5.4 | exon | 23966286 | 23966351 | 23966286 | ID=MS.gene80715.t1.exon5;Parent=MS.gene80715.t1 |
| chr5.4 | CDS | 23966286 | 23966351 | 23966286 | ID=cds.MS.gene80715.t1;Parent=MS.gene80715.t1 |
| chr5.4 | exon | 23966109 | 23966200 | 23966109 | ID=MS.gene80715.t1.exon6;Parent=MS.gene80715.t1 |
| chr5.4 | CDS | 23966109 | 23966200 | 23966109 | ID=cds.MS.gene80715.t1;Parent=MS.gene80715.t1 |
| chr5.4 | exon | 23965979 | 23966026 | 23965979 | ID=MS.gene80715.t1.exon7;Parent=MS.gene80715.t1 |
| chr5.4 | CDS | 23965979 | 23966026 | 23965979 | ID=cds.MS.gene80715.t1;Parent=MS.gene80715.t1 |
| chr5.4 | exon | 23965392 | 23965509 | 23965392 | ID=MS.gene80715.t1.exon8;Parent=MS.gene80715.t1 |
| chr5.4 | CDS | 23965392 | 23965509 | 23965392 | ID=cds.MS.gene80715.t1;Parent=MS.gene80715.t1 |
| Gene Sequence |
| Protein sequence |
