AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene81671


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene81671.t1 MTR_5g084790 98.873 355 4 0 1 355 1 355 0.0 733
MS.gene81671.t1 MTR_3g082830 78.116 329 72 0 27 355 33 361 0.0 554
MS.gene81671.t1 MTR_3g464730 59.829 351 135 3 10 354 1 351 5.14e-154 437
MS.gene81671.t1 MTR_5g084750 59.574 329 133 0 25 353 23 351 1.37e-152 433
MS.gene81671.t1 MTR_5g084770 58.769 325 133 1 30 353 26 350 1.82e-145 415
MS.gene81671.t1 MTR_2g100620 43.396 318 179 1 30 346 29 346 6.02e-98 294
MS.gene81671.t1 MTR_8g014910 42.767 318 181 1 30 346 30 347 4.20e-97 292
MS.gene81671.t1 MTR_1g025760 40.456 351 205 3 7 354 53 402 8.43e-94 285
MS.gene81671.t1 MTR_5g022630 41.457 357 203 3 3 353 10 366 1.78e-93 283
MS.gene81671.t1 MTR_8g075200 43.034 323 184 0 31 353 40 362 2.51e-93 285
MS.gene81671.t1 MTR_4g056280 41.908 346 199 1 1 346 1 344 3.69e-93 282
MS.gene81671.t1 MTR_8g075230 39.496 357 210 1 4 354 2 358 7.87e-93 281
MS.gene81671.t1 MTR_8g075220 40.437 366 201 4 6 354 2 367 8.95e-93 281
MS.gene81671.t1 MTR_5g022640 40.449 356 207 2 3 353 10 365 1.32e-92 281
MS.gene81671.t1 MTR_1g025780 42.769 325 184 2 30 354 39 361 8.99e-92 279
MS.gene81671.t1 MTR_5g074270 41.265 332 191 3 25 353 26 356 7.38e-91 277
MS.gene81671.t1 MTR_2g015080 43.452 336 174 7 15 336 18 351 1.56e-88 271
MS.gene81671.t1 MTR_4g087985 42.730 337 169 6 15 336 20 347 4.40e-88 270
MS.gene81671.t1 MTR_2g084585 41.463 328 192 0 15 342 13 340 6.38e-88 269
MS.gene81671.t1 MTR_1g025700 39.255 349 206 2 10 353 23 370 1.17e-86 266
MS.gene81671.t1 MTR_1g025680 40.606 330 194 2 27 355 29 357 2.14e-84 263
MS.gene81671.t1 MTR_3g114090 40.432 324 191 2 31 353 35 357 2.33e-84 260
MS.gene81671.t1 MTR_1g025720 38.415 328 201 1 27 354 32 358 3.68e-83 257
MS.gene81671.t1 MTR_3g114120 39.692 325 191 2 30 354 45 364 5.75e-81 251
MS.gene81671.t1 MTR_4g056160 37.681 345 210 3 9 350 6 348 1.86e-77 242
MS.gene81671.t1 MTR_5g009100 40.127 314 182 6 35 345 49 359 4.38e-72 229
MS.gene81671.t1 MTR_8g062580 82.400 125 18 2 228 349 64 187 8.09e-70 219
MS.gene81671.t1 MTR_5g083040 37.237 333 200 4 29 354 29 359 1.99e-69 221
MS.gene81671.t1 MTR_2g044100 39.759 332 186 7 21 343 30 356 4.92e-69 222
MS.gene81671.t1 MTR_1g025910 36.449 321 190 5 37 355 41 349 1.42e-68 220
MS.gene81671.t1 MTR_7g116570 35.455 330 197 7 28 351 30 349 3.79e-68 218
MS.gene81671.t1 MTR_4g019880 35.714 336 201 9 16 342 15 344 9.64e-68 218
MS.gene81671.t1 MTR_7g116500 34.384 349 218 8 1 343 1 344 1.69e-67 217
MS.gene81671.t1 MTR_0565s0010 36.336 333 204 6 15 343 15 343 1.81e-66 214
MS.gene81671.t1 MTR_7g116520 34.513 339 210 6 15 347 17 349 4.05e-66 213
MS.gene81671.t1 MTR_1g069175 35.152 330 202 7 25 349 26 348 3.77e-65 211
MS.gene81671.t1 MTR_1g079540 36.257 342 208 7 8 343 5 342 9.35e-65 209
MS.gene81671.t1 MTR_8g079050 33.799 358 221 6 6 347 2 359 1.77e-64 209
MS.gene81671.t1 MTR_6g021530 33.429 347 222 7 5 346 2 344 4.08e-64 208
MS.gene81671.t1 MTR_7g116510 34.627 335 212 6 17 347 10 341 1.99e-63 206
MS.gene81671.t1 MTR_5g078210 34.639 332 208 8 15 343 9 334 2.29e-63 206
MS.gene81671.t1 MTR_2g033920 35.530 349 216 6 3 346 6 350 4.07e-62 203
MS.gene81671.t1 MTR_1g079530 37.072 321 184 8 32 346 29 337 5.88e-62 202
MS.gene81671.t1 MTR_3g024510 35.569 343 209 9 7 343 12 348 1.11e-60 199
MS.gene81671.t1 MTR_8g087890 36.471 340 199 9 13 343 10 341 1.23e-60 199
MS.gene81671.t1 MTR_1g024890 35.110 319 199 6 32 346 32 346 2.01e-60 198
MS.gene81671.t1 MTR_8g087870 36.957 322 176 8 29 342 26 328 1.86e-58 193
MS.gene81671.t1 MTR_4g035353 32.941 340 218 6 15 347 10 346 1.36e-57 191
MS.gene81671.t1 MTR_2g033930 32.659 346 223 6 8 347 5 346 2.00e-57 191
MS.gene81671.t1 MTR_4g122200 33.433 335 214 6 18 347 21 351 3.27e-57 190
MS.gene81671.t1 MTR_3g435540 33.229 319 203 8 35 348 26 339 3.32e-57 190
MS.gene81671.t1 MTR_3g098270 33.754 317 201 6 32 342 34 347 2.79e-56 188
MS.gene81671.t1 MTR_7g008060 32.209 326 200 7 25 346 26 334 3.69e-54 182
MS.gene81671.t1 MTR_1108s0010 42.925 212 110 1 135 346 3 203 6.64e-54 177
MS.gene81671.t1 MTR_4g108690 32.704 318 204 8 35 347 30 342 1.01e-53 181
MS.gene81671.t1 MTR_3g005650 34.277 318 198 8 29 343 27 336 1.30e-52 178
MS.gene81671.t1 MTR_5g093090 33.430 344 211 9 6 340 4 338 2.82e-52 177
MS.gene81671.t1 MTR_2g017875 34.688 320 190 9 29 342 31 337 1.41e-51 175
MS.gene81671.t1 MTR_3g052490 33.535 331 203 9 15 335 14 337 4.59e-51 174
MS.gene81671.t1 MTR_5g078210 33.651 315 201 7 15 325 9 319 1.67e-50 171
MS.gene81671.t1 MTR_8g074560 36.250 320 187 10 27 335 26 339 3.80e-50 172
MS.gene81671.t1 MTR_8g022810 34.839 310 191 7 32 335 41 345 2.36e-49 170
MS.gene81671.t1 MTR_8g074570 32.822 326 206 7 24 342 31 350 3.03e-48 167
MS.gene81671.t1 MTR_2g017925 36.335 322 180 13 28 342 29 332 1.14e-47 165
MS.gene81671.t1 MTR_3g052580 30.882 340 219 9 12 342 7 339 3.98e-47 164
MS.gene81671.t1 MTR_2g017955 36.025 322 185 11 28 342 29 336 4.19e-47 164
MS.gene81671.t1 MTR_3g052580 30.882 340 219 9 12 342 6 338 7.72e-47 164
MS.gene81671.t1 MTR_3g005660 32.298 322 207 9 29 343 33 350 2.15e-46 162
MS.gene81671.t1 MTR_8g022790 34.891 321 193 7 29 345 34 342 3.09e-46 161
MS.gene81671.t1 MTR_8g031390 30.841 321 203 9 32 345 37 345 4.51e-46 161
MS.gene81671.t1 MTR_3g052480 32.641 337 209 10 15 340 15 344 4.93e-46 161
MS.gene81671.t1 MTR_2g033920 34.589 292 184 4 4 291 7 295 1.54e-45 158
MS.gene81671.t1 MTR_8g031420 31.677 322 200 9 32 345 35 344 1.92e-44 157
MS.gene81671.t1 MTR_8g031430 31.056 322 202 9 32 345 37 346 1.53e-43 154
MS.gene81671.t1 MTR_8g031400 31.875 320 198 9 32 343 37 344 4.24e-43 153
MS.gene81671.t1 MTR_3g023220 32.602 319 192 11 29 342 30 330 4.19e-42 150
MS.gene81671.t1 MTR_0009s0250 31.661 319 201 9 27 342 28 332 8.42e-41 147
MS.gene81671.t1 MTR_2g017965 32.919 322 196 13 28 342 29 337 1.37e-40 147
MS.gene81671.t1 MTR_8g074580 28.606 409 213 11 4 347 8 402 3.05e-40 147
MS.gene81671.t1 MTR_5g093090 33.220 295 180 8 6 291 4 290 3.12e-40 144
MS.gene81671.t1 MTR_3g021460 32.059 340 199 12 14 342 11 329 7.79e-40 144
MS.gene81671.t1 MTR_8g031390 31.449 283 179 8 32 311 37 307 1.29e-39 143
MS.gene81671.t1 MTR_4g036375 40.107 187 109 2 1 186 1 185 2.81e-38 135
MS.gene81671.t1 MTR_5g087690 29.595 321 206 7 30 343 48 355 4.07e-36 135
MS.gene81671.t1 MTR_8g022810 31.290 310 149 8 32 335 41 292 7.40e-35 130
MS.gene81671.t1 MTR_5g084880 49.153 118 60 0 180 297 1 118 1.02e-34 124
MS.gene81671.t1 MTR_2g017915 32.177 317 169 15 28 335 29 308 1.30e-34 130
MS.gene81671.t1 MTR_2g461580 30.275 327 188 12 30 342 29 329 2.29e-33 127
MS.gene81671.t1 MTR_1g079590 36.264 182 112 3 32 210 31 211 2.02e-32 120
MS.gene81671.t1 MTR_7g033150 28.297 364 195 13 27 347 30 370 2.51e-32 125
MS.gene81671.t1 MTR_5g074210 39.597 149 88 2 206 353 65 212 4.16e-32 120
MS.gene81671.t1 MTR_1g030268 28.912 377 217 15 1 341 1 362 9.99e-32 123
MS.gene81671.t1 MTR_8g089805 29.107 347 202 13 31 346 39 372 2.22e-30 119
MS.gene81671.t1 MTR_1g030275 27.568 370 213 13 15 350 22 370 4.27e-30 119
MS.gene81671.t1 MTR_1g030230 28.739 341 198 12 31 341 31 356 1.76e-29 117
MS.gene81671.t1 MTR_7g033155 27.624 362 199 15 32 346 38 383 2.29e-29 117
MS.gene81671.t1 MTR_6g049230 46.154 130 70 0 198 327 65 194 2.46e-29 112
MS.gene81671.t1 MTR_5g093090 37.755 196 108 7 6 192 4 194 3.54e-29 112
MS.gene81671.t1 MTR_7g087190 25.995 377 232 12 10 351 17 381 2.37e-28 114
MS.gene81671.t1 MTR_1g030340 27.368 380 215 14 5 341 6 367 4.19e-28 113
MS.gene81671.t1 MTR_7g111780 27.761 335 213 12 27 347 31 350 4.71e-28 112
MS.gene81671.t1 MTR_1g030220 28.488 344 193 13 32 341 40 364 1.16e-27 112
MS.gene81671.t1 MTR_0127s0040 30.594 219 141 7 130 342 4 217 3.19e-27 107
MS.gene81671.t1 MTR_1g060500 29.609 358 195 14 22 354 33 358 3.28e-27 110
MS.gene81671.t1 MTR_8g028160 25.714 350 217 10 32 351 36 372 8.18e-27 109
MS.gene81671.t1 MTR_4g036385 39.655 116 70 0 236 351 18 133 1.22e-26 103
MS.gene81671.t1 MTR_7g116870 25.843 356 223 13 13 341 14 355 5.79e-26 107
MS.gene81671.t1 MTR_4g056220 43.119 109 62 0 238 346 73 181 7.36e-25 100
MS.gene81671.t1 MTR_2g079090 29.141 326 201 12 36 347 34 343 1.23e-24 103
MS.gene81671.t1 MTR_2g079080 28.528 326 203 11 36 347 34 343 1.63e-24 103
MS.gene81671.t1 MTR_1g082390 25.833 360 226 11 15 346 14 360 2.09e-24 102
MS.gene81671.t1 MTR_3g463960 28.198 344 212 14 32 351 44 376 2.17e-24 103
MS.gene81671.t1 MTR_3g463950 28.198 344 212 14 32 351 44 376 2.17e-24 103
MS.gene81671.t1 MTR_3g463970 28.198 344 212 14 32 351 44 376 2.17e-24 103
MS.gene81671.t1 MTR_3g463940 28.198 344 212 14 32 351 44 376 2.17e-24 103
MS.gene81671.t1 MTR_7g113860 24.403 377 231 13 5 346 8 365 3.90e-24 102
MS.gene81671.t1 MTR_7g113860 25.956 366 218 13 13 346 15 359 3.94e-24 102
MS.gene81671.t1 MTR_0029s0050 28.963 328 199 12 36 347 34 343 4.88e-24 101
MS.gene81671.t1 MTR_3g463930 27.635 351 212 13 32 351 44 383 5.72e-24 102
MS.gene81671.t1 MTR_0029s0100 28.963 328 199 12 36 347 34 343 9.57e-24 100
MS.gene81671.t1 MTR_2g018015 33.654 208 130 6 22 224 26 230 1.39e-23 99.4
MS.gene81671.t1 MTR_6g007100 25.429 350 231 11 12 347 14 347 1.61e-23 100
MS.gene81671.t1 MTR_3g069780 28.487 337 217 11 32 351 30 359 2.21e-23 100
MS.gene81671.t1 MTR_3g438030 28.487 337 217 11 32 351 30 359 2.39e-23 100
MS.gene81671.t1 MTR_8g089805 27.622 286 168 10 92 346 27 304 5.69e-23 98.2
MS.gene81671.t1 MTR_7g104220 28.972 321 187 14 30 335 40 334 5.98e-23 98.6
MS.gene81671.t1 MTR_2g015580 28.144 334 214 12 32 346 47 373 6.39e-23 99.0
MS.gene81671.t1 MTR_2g043980 28.158 380 215 17 1 352 1 350 1.06e-22 97.8
MS.gene81671.t1 MTR_7g033165 25.788 349 217 11 27 346 28 363 1.32e-22 97.8
MS.gene81671.t1 MTR_1g030268 28.527 319 184 13 1 291 1 303 6.12e-22 95.5
MS.gene81671.t1 MTR_2g015630 27.545 334 210 14 37 347 36 360 6.39e-22 96.3
MS.gene81671.t1 MTR_6g034400 39.024 123 75 0 84 206 3 125 7.57e-22 90.1
MS.gene81671.t1 MTR_8g038680 24.513 359 236 11 14 346 8 357 8.74e-22 95.5
MS.gene81671.t1 MTR_2g015590 27.193 342 210 12 32 347 31 359 9.29e-22 95.5
MS.gene81671.t1 MTR_1g060490 27.385 325 192 14 33 341 38 334 1.00e-21 95.1
MS.gene81671.t1 MTR_6g007095 26.023 342 213 11 31 347 40 366 1.83e-21 96.3
MS.gene81671.t1 MTR_6g007095 25.503 298 189 9 67 347 401 682 6.25e-20 91.7
MS.gene81671.t1 MTR_1g060520 26.531 343 189 12 22 354 33 322 2.57e-20 90.5
MS.gene81671.t1 MTR_2g017925 32.727 220 127 10 129 342 25 229 4.36e-20 89.0
MS.gene81671.t1 MTR_4g104240 25.294 340 221 12 33 352 40 366 5.03e-20 90.5
MS.gene81671.t1 MTR_6g007090 25.266 376 229 13 6 346 5 363 5.28e-20 90.5
MS.gene81671.t1 MTR_2g087292 26.937 271 137 6 30 299 31 241 1.10e-19 88.2
MS.gene81671.t1 MTR_6g049220 29.570 186 86 1 20 205 18 158 1.46e-19 85.1
MS.gene81671.t1 MTR_2g015650 27.697 343 204 15 32 346 31 357 2.44e-19 88.6
MS.gene81671.t1 MTR_3g448360 28.385 384 211 19 6 351 2 359 2.93e-19 88.2
MS.gene81671.t1 MTR_1g030265 27.083 288 169 10 84 341 53 329 5.77e-19 87.0
MS.gene81671.t1 MTR_1g092740 27.019 322 205 12 33 345 39 339 6.23e-19 87.0
MS.gene81671.t1 MTR_7g111780 27.650 217 140 6 144 347 39 251 1.98e-18 84.3
MS.gene81671.t1 MTR_1g092750 28.344 314 192 13 33 335 41 332 2.32e-17 82.4
MS.gene81671.t1 MTR_3g069520 26.923 338 219 11 32 351 30 357 3.15e-17 82.4
MS.gene81671.t1 MTR_7g033165 26.471 272 166 9 27 277 28 286 5.21e-17 80.9
MS.gene81671.t1 MTR_7g113860 24.042 287 174 9 92 346 17 291 6.62e-17 80.9
MS.gene81671.t1 MTR_1g092760 28.793 323 178 14 33 335 40 330 2.58e-16 79.3
MS.gene81671.t1 MTR_2g017895 26.277 274 166 12 80 347 5 248 1.04e-14 73.9
MS.gene81671.t1 MTR_8g012540 23.684 342 220 12 14 326 8 337 5.98e-13 69.3
MS.gene81671.t1 MTR_2g015590 27.305 282 170 11 32 291 31 299 3.93e-12 67.0
MS.gene81671.t1 MTR_5g093550 43.662 71 36 2 286 353 71 140 7.94e-11 60.1
MS.gene81671.t1 MTR_5g062890 38.144 97 57 3 6 100 3 98 8.78e-11 58.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene81671.t1 AT2G04570 63.824 340 120 1 18 354 11 350 1.64e-166 468
MS.gene81671.t1 AT2G42990 60.119 336 133 1 15 349 10 345 7.69e-159 449
MS.gene81671.t1 AT4G26790 60.182 329 131 0 25 353 22 350 2.86e-148 422
MS.gene81671.t1 AT4G26790 60.182 329 131 0 25 353 22 350 2.86e-148 422
MS.gene81671.t1 AT5G03810 42.136 337 193 2 8 343 7 342 7.47e-94 284
MS.gene81671.t1 AT3G16370 42.138 318 183 1 30 346 28 345 1.91e-91 278
MS.gene81671.t1 AT5G03820 41.056 341 195 2 7 343 8 346 4.71e-91 277
MS.gene81671.t1 AT5G03820 41.056 341 195 2 7 343 36 374 1.83e-90 276
MS.gene81671.t1 AT3G14820 43.210 324 175 3 26 344 26 345 1.18e-89 273
MS.gene81671.t1 AT1G75900 40.308 325 193 1 30 354 41 364 1.37e-89 273
MS.gene81671.t1 AT1G59406 40.615 325 186 4 30 352 28 347 3.48e-89 272
MS.gene81671.t1 AT1G59030 40.615 325 186 4 30 352 28 347 3.48e-89 272
MS.gene81671.t1 AT1G58725 40.615 325 186 4 30 352 28 347 3.48e-89 272
MS.gene81671.t1 AT3G53100 41.667 336 195 1 8 342 4 339 8.26e-87 266
MS.gene81671.t1 AT1G58520 39.514 329 185 5 26 352 24 340 1.04e-86 265
MS.gene81671.t1 AT1G58525 39.514 329 185 5 26 352 24 340 1.04e-86 265
MS.gene81671.t1 AT1G75880 41.049 324 191 0 30 353 50 373 1.85e-86 266
MS.gene81671.t1 AT1G06990 40.798 326 187 3 31 351 36 360 3.32e-86 265
MS.gene81671.t1 AT5G42170 38.462 325 197 1 30 354 48 369 1.17e-85 263
MS.gene81671.t1 AT2G31540 40.549 328 187 5 31 353 34 358 1.58e-85 263
MS.gene81671.t1 AT1G75880 40.923 325 191 1 30 353 50 374 3.78e-85 262
MS.gene81671.t1 AT5G22810 41.121 321 186 1 25 342 27 347 5.19e-85 261
MS.gene81671.t1 AT5G45960 41.693 319 178 4 25 337 40 356 1.09e-83 259
MS.gene81671.t1 AT1G20120 39.077 325 198 0 31 355 77 401 4.16e-82 256
MS.gene81671.t1 AT5G45950 39.650 343 197 6 15 354 21 356 4.50e-82 254
MS.gene81671.t1 AT3G43570 37.537 341 177 5 16 352 10 318 5.20e-82 253
MS.gene81671.t1 AT1G75890 40.810 321 188 2 31 349 46 366 3.50e-81 252
MS.gene81671.t1 AT2G24560 39.752 322 190 4 31 349 33 353 4.10e-81 252
MS.gene81671.t1 AT1G75890 40.810 321 188 2 31 349 75 395 5.32e-81 253
MS.gene81671.t1 AT1G20132 37.539 317 198 0 31 347 60 376 5.98e-79 247
MS.gene81671.t1 AT2G30220 39.939 328 189 5 31 355 32 354 9.41e-79 245
MS.gene81671.t1 AT2G30310 38.994 318 190 4 31 345 33 349 3.08e-78 244
MS.gene81671.t1 AT1G75890 39.222 334 188 3 31 349 46 379 5.07e-78 244
MS.gene81671.t1 AT5G63170 41.801 311 167 4 27 336 23 320 1.15e-76 239
MS.gene81671.t1 AT1G58430 38.941 321 192 4 25 342 28 347 2.88e-76 239
MS.gene81671.t1 AT1G20130 36.607 336 197 3 30 352 182 514 1.62e-74 239
MS.gene81671.t1 AT1G20130 36.607 336 197 3 30 352 202 534 2.11e-74 239
MS.gene81671.t1 AT1G20135 38.671 331 184 5 7 336 9 321 1.48e-73 231
MS.gene81671.t1 AT2G40250 36.474 329 201 3 27 349 31 357 3.34e-73 231
MS.gene81671.t1 AT1G73610 37.195 328 191 3 27 353 30 343 4.05e-71 225
MS.gene81671.t1 AT3G43550 43.182 264 143 4 30 291 28 286 7.58e-71 223
MS.gene81671.t1 AT1G23500 37.892 351 198 5 3 349 6 340 1.90e-69 221
MS.gene81671.t1 AT1G75910 36.286 350 201 6 10 349 1 338 4.34e-68 218
MS.gene81671.t1 AT2G24560 40.977 266 154 3 31 293 33 298 2.31e-66 212
MS.gene81671.t1 AT1G75920 35.613 351 208 5 3 349 2 338 1.22e-65 211
MS.gene81671.t1 AT4G10950 36.050 319 198 6 30 345 69 384 2.21e-65 213
MS.gene81671.t1 AT5G33370 35.860 343 210 7 8 346 8 344 2.63e-65 211
MS.gene81671.t1 AT2G23540 34.743 331 207 6 24 346 40 369 1.10e-63 207
MS.gene81671.t1 AT1G29670 36.390 349 210 8 1 343 67 409 4.96e-63 207
MS.gene81671.t1 AT1G29670 36.416 346 208 8 4 343 2 341 7.33e-63 205
MS.gene81671.t1 AT4G10950 35.423 319 196 6 30 345 69 380 2.11e-62 204
MS.gene81671.t1 AT3G04290 34.024 338 215 6 13 346 10 343 3.09e-62 203
MS.gene81671.t1 AT3G50400 35.652 345 203 10 15 342 10 352 5.87e-62 202
MS.gene81671.t1 AT1G75920 33.799 358 202 6 15 349 3 348 4.73e-60 197
MS.gene81671.t1 AT5G18430 32.704 318 210 3 32 346 28 344 5.58e-60 197
MS.gene81671.t1 AT4G28780 32.132 333 222 4 16 346 15 345 1.60e-59 196
MS.gene81671.t1 AT5G37690 33.439 314 201 6 35 345 30 338 2.56e-58 192
MS.gene81671.t1 AT1G29660 34.770 348 216 7 1 343 1 342 1.53e-57 191
MS.gene81671.t1 AT1G74460 32.948 346 220 10 8 348 1 339 5.85e-57 189
MS.gene81671.t1 AT1G75930 34.375 352 211 8 3 349 2 338 1.27e-56 188
MS.gene81671.t1 AT5G15720 35.780 327 182 9 31 342 29 342 2.03e-55 185
MS.gene81671.t1 AT5G41890 32.386 352 216 9 11 347 14 358 2.05e-55 186
MS.gene81671.t1 AT5G08460 32.123 358 224 6 2 342 8 363 3.65e-55 185
MS.gene81671.t1 AT1G71691 35.562 329 198 10 20 343 43 362 5.45e-55 185
MS.gene81671.t1 AT5G45670 33.033 333 215 6 15 343 12 340 8.84e-55 184
MS.gene81671.t1 AT1G71250 34.375 320 202 6 28 343 37 352 5.93e-54 182
MS.gene81671.t1 AT5G37690 32.484 314 196 7 35 345 30 330 1.76e-53 180
MS.gene81671.t1 AT4G18970 34.169 319 200 7 30 343 26 339 4.04e-53 179
MS.gene81671.t1 AT1G75920 34.899 298 178 4 56 349 25 310 1.17e-52 177
MS.gene81671.t1 AT4G18970 34.385 317 198 7 31 342 27 338 1.70e-52 179
MS.gene81671.t1 AT1G33811 34.557 327 199 11 27 343 29 350 4.48e-52 177
MS.gene81671.t1 AT5G33370 35.764 288 176 6 8 291 8 290 9.13e-50 170
MS.gene81671.t1 AT1G75920 30.484 351 195 6 3 349 2 307 2.86e-48 165
MS.gene81671.t1 AT1G71120 34.049 326 200 6 23 343 22 337 5.21e-48 166
MS.gene81671.t1 AT1G53920 31.412 347 218 8 13 345 21 361 3.90e-47 164
MS.gene81671.t1 AT2G31550 35.616 219 134 4 139 353 2 217 2.18e-45 155
MS.gene81671.t1 AT2G19010 31.515 330 202 10 29 352 27 338 2.44e-44 156
MS.gene81671.t1 AT2G19010 31.515 330 202 10 29 352 57 368 4.81e-44 156
MS.gene81671.t1 AT5G40990 32.121 330 212 6 24 345 29 354 1.06e-43 155
MS.gene81671.t1 AT1G53940 33.951 324 198 10 32 345 39 356 1.72e-42 152
MS.gene81671.t1 AT3G14225 31.889 323 206 7 32 345 37 354 4.84e-42 150
MS.gene81671.t1 AT4G16230 34.137 249 157 4 5 248 2 248 5.69e-42 147
MS.gene81671.t1 AT3G14225 32.110 327 204 8 32 345 37 358 1.25e-41 149
MS.gene81671.t1 AT1G71691 35.379 277 166 9 20 291 43 311 2.19e-41 147
MS.gene81671.t1 AT5G55050 31.627 332 210 10 28 350 35 358 2.68e-41 149
MS.gene81671.t1 AT2G19060 30.581 327 191 11 30 343 28 331 6.57e-41 147
MS.gene81671.t1 AT2G19050 30.462 325 194 9 29 343 28 330 8.45e-41 147
MS.gene81671.t1 AT5G15720 35.507 276 151 8 31 291 29 292 1.52e-40 145
MS.gene81671.t1 AT2G03980 31.677 322 198 12 31 342 42 351 4.46e-39 142
MS.gene81671.t1 AT2G03980 31.677 322 198 12 31 342 42 351 4.46e-39 142
MS.gene81671.t1 AT2G03980 31.677 322 198 12 31 342 42 351 4.46e-39 142
MS.gene81671.t1 AT2G03980 31.677 322 198 12 31 342 42 351 4.46e-39 142
MS.gene81671.t1 AT4G30140 31.250 320 196 11 29 343 30 330 1.41e-37 138
MS.gene81671.t1 AT1G53990 29.909 331 211 8 24 345 27 345 1.34e-34 130
MS.gene81671.t1 AT2G19050 33.202 253 152 8 26 273 25 265 1.92e-34 128
MS.gene81671.t1 AT1G71691 31.128 257 165 8 92 343 12 261 7.79e-33 124
MS.gene81671.t1 AT5G15720 30.827 266 159 7 92 342 56 311 8.83e-33 125
MS.gene81671.t1 AT1G53940 35.094 265 161 9 32 291 39 297 8.47e-32 122
MS.gene81671.t1 AT2G04020 36.816 201 116 7 31 227 42 235 1.86e-31 119
MS.gene81671.t1 AT2G04020 36.364 209 122 7 31 235 42 243 2.86e-31 120
MS.gene81671.t1 AT1G54020 28.655 342 211 13 15 345 11 330 6.69e-31 120
MS.gene81671.t1 AT1G09390 28.443 334 207 12 31 347 36 354 1.80e-29 117
MS.gene81671.t1 AT1G56670 28.701 331 210 12 31 347 39 357 2.26e-29 116
MS.gene81671.t1 AT1G54790 25.479 365 236 10 8 346 8 362 3.12e-29 116
MS.gene81671.t1 AT1G28640 28.902 346 213 16 29 351 32 367 3.17e-29 116
MS.gene81671.t1 AT3G14220 28.182 330 200 11 26 342 26 331 5.36e-29 115
MS.gene81671.t1 AT3G26430 29.459 370 217 15 7 345 6 362 1.92e-28 114
MS.gene81671.t1 AT1G54030 29.582 311 188 12 33 338 53 337 2.25e-28 114
MS.gene81671.t1 AT1G54010 27.434 339 221 9 10 340 12 333 7.31e-28 112
MS.gene81671.t1 AT3G05180 26.685 356 209 12 25 346 29 366 7.78e-28 112
MS.gene81671.t1 AT3G27950 27.869 366 218 13 12 347 7 356 8.29e-28 112
MS.gene81671.t1 AT1G28600 29.539 369 216 16 10 346 1 357 2.33e-27 111
MS.gene81671.t1 AT1G28660 29.651 344 203 17 29 346 32 362 3.14e-27 110
MS.gene81671.t1 AT1G28650 29.377 337 207 16 29 343 34 361 7.53e-27 110
MS.gene81671.t1 AT1G31550 28.530 347 198 15 32 347 36 363 1.49e-26 109
MS.gene81671.t1 AT5G03610 28.108 370 226 14 8 355 7 358 1.83e-26 108
MS.gene81671.t1 AT1G28570 28.989 376 219 17 1 347 6 362 1.87e-26 108
MS.gene81671.t1 AT1G28610 28.415 366 220 15 5 342 2 353 2.15e-26 108
MS.gene81671.t1 AT5G14450 25.745 369 233 11 12 350 18 375 3.42e-26 108
MS.gene81671.t1 AT1G28660 29.651 344 202 18 29 346 32 361 4.34e-26 107
MS.gene81671.t1 AT1G28670 30.303 330 198 16 29 335 32 352 1.73e-25 106
MS.gene81671.t1 AT1G67830 26.316 342 208 12 31 341 29 357 1.78e-25 105
MS.gene81671.t1 AT1G28580 28.280 343 203 15 32 346 37 364 1.79e-25 106
MS.gene81671.t1 AT1G54000 26.627 338 221 9 15 342 15 335 5.75e-25 104
MS.gene81671.t1 AT3G62280 27.941 340 209 13 27 350 31 350 7.19e-25 104
MS.gene81671.t1 AT1G54790 23.416 363 239 11 13 346 9 361 5.67e-24 102
MS.gene81671.t1 AT1G31550 27.746 346 199 15 32 347 36 360 9.01e-24 101
MS.gene81671.t1 AT2G27360 28.488 344 208 14 32 351 33 362 1.39e-23 100
MS.gene81671.t1 AT5G45910 29.769 346 215 15 25 347 23 363 3.82e-23 99.4
MS.gene81671.t1 AT3G14210 30.031 323 193 13 32 342 36 337 3.66e-22 97.1
MS.gene81671.t1 AT4G01130 26.016 369 228 14 12 347 10 366 4.44e-22 96.7
MS.gene81671.t1 AT3G09930 27.479 353 209 14 22 354 29 354 5.60e-21 93.2
MS.gene81671.t1 AT3G09930 27.479 353 209 14 22 354 29 354 5.60e-21 93.2
MS.gene81671.t1 AT1G28590 26.100 341 215 13 32 347 36 364 7.96e-21 93.2
MS.gene81671.t1 AT1G54790 22.365 389 237 13 13 346 9 387 7.45e-20 90.5
MS.gene81671.t1 AT3G48460 25.485 361 227 13 16 347 15 362 8.03e-20 90.1
MS.gene81671.t1 AT1G54030 28.992 238 143 9 33 266 53 268 3.09e-19 87.4
MS.gene81671.t1 AT1G54020 25.000 264 173 8 87 345 1 244 4.30e-17 80.9
MS.gene81671.t1 AT1G54020 25.000 264 173 8 87 345 1 244 4.30e-17 80.9
MS.gene81671.t1 AT1G54020 25.000 264 173 8 87 345 1 244 4.30e-17 80.9
MS.gene81671.t1 AT4G16220 38.655 119 70 2 5 122 2 118 4.60e-17 80.1
MS.gene81671.t1 AT1G56670 27.306 271 175 11 31 291 39 297 1.21e-16 79.7
MS.gene81671.t1 AT1G54020 26.562 192 130 5 159 345 10 195 7.07e-16 76.6
MS.gene81671.t1 AT4G01130 26.269 335 197 13 12 325 10 315 2.20e-15 76.6
MS.gene81671.t1 AT4G16233 37.143 105 64 2 240 343 6 109 3.39e-15 72.0
MS.gene81671.t1 AT4G01130 23.810 273 174 8 104 347 13 280 4.59e-15 75.1
MS.gene81671.t1 AT5G03980 23.276 232 160 7 131 352 94 317 6.27e-15 75.1
MS.gene81671.t1 AT5G03600 25.228 329 188 14 29 336 46 337 1.10e-14 74.7
MS.gene81671.t1 AT5G03600 25.228 329 188 14 29 336 11 302 1.14e-14 74.3
MS.gene81671.t1 AT1G28580 24.739 287 183 12 82 346 8 283 3.89e-14 72.8
MS.gene81671.t1 AT2G36325 26.625 323 197 15 29 336 44 341 4.27e-14 73.2
MS.gene81671.t1 AT1G28570 26.316 209 131 9 155 347 89 290 4.15e-12 66.6
MS.gene81671.t1 AT1G28570 26.829 205 127 9 159 347 2 199 7.72e-12 64.7
MS.gene81671.t1 AT3G14210 28.272 191 127 6 159 342 22 209 5.09e-11 62.8

Find 79 sgRNAs with CRISPR-Local

Find 156 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAAACACCAATTTCATATC+AGG 0.225456 5.1:-66710498 None:intergenic
ATCAGTACACCTTATGAGTA+TGG 0.279152 5.1:+66710182 MS.gene81671:CDS
GATGTGCAACATAATGTAAT+AGG 0.286354 5.1:-66710526 None:intergenic
GTGTATTGTGATGCCCTTCC+TGG 0.317232 5.1:-66710240 None:intergenic
ATGCTTCAAAGTTTGTCTTT+TGG 0.324981 5.1:+66710759 MS.gene81671:CDS
AGAATTTGTGCCTGCTTACT+TGG 0.325164 5.1:+66708586 MS.gene81671:CDS
TGGAATGAAGTTGTTGTTCC+CGG 0.361945 5.1:-66708444 None:intergenic
GATTTCATAGCAGAATCTTT+TGG 0.368924 5.1:+66708557 MS.gene81671:CDS
GGAGCTCCCTGATATGAAAT+TGG 0.378851 5.1:+66710491 MS.gene81671:CDS
ATGTGCAACATAATGTAATA+GGG 0.391121 5.1:-66710525 None:intergenic
GATATGAACTTAGATTCTTT+TGG 0.398361 5.1:-66710125 None:intergenic
AAAATCTGAAATATTATACT+TGG 0.402632 5.1:-66708612 None:intergenic
CTATTCCAGCAAGAAAAGTT+TGG 0.411958 5.1:-66710275 None:intergenic
TGCAGTCTGTGATACCATTA+TGG 0.412290 5.1:+66710076 MS.gene81671:intron
TCTCCCATTTGAGAATCTTC+CGG 0.414628 5.1:-66708525 None:intergenic
AAGAATCTAAGTTCATATCT+TGG 0.420264 5.1:+66710129 MS.gene81671:CDS
TACTCTAATTGCTTCCATAA+TGG 0.422659 5.1:-66710090 None:intergenic
CCATGGGTGGTAACCCTCCC+AGG 0.433970 5.1:-66710347 None:intergenic
CGTTTGTTCCCATACTCATA+AGG 0.435161 5.1:-66710191 None:intergenic
ATAAGGAATCTATATGCTCT+TGG 0.438892 5.1:+66710309 MS.gene81671:CDS
AAGTGCTATGTTATTAAAGT+TGG 0.444135 5.1:-66710424 None:intergenic
ACTCATAAGGTGTACTGATT+CGG 0.453701 5.1:-66710178 None:intergenic
TCAGTGGCATGTTGTGCTAC+TGG 0.455491 5.1:+66710683 MS.gene81671:CDS
TCTCCGAACACGATTATTGC+TGG 0.455962 5.1:-66708407 None:intergenic
AGATGGGTTATGCATGCAGC+AGG 0.458302 5.1:+66710714 MS.gene81671:CDS
CCGTATGGACGTGACTTTCA+AGG 0.470414 5.1:+66708491 MS.gene81671:CDS
TGCTACTGGAATGTTTGAGA+TGG 0.473918 5.1:+66710697 MS.gene81671:CDS
GGAGACTCCTCCGTTGATGC+CGG 0.479996 5.1:+66708425 MS.gene81671:CDS
GCGACCGGAAGATTCTCAAA+TGG 0.482919 5.1:+66708521 MS.gene81671:CDS
CTCCAATGGCAAACATCCCA+TGG 0.486462 5.1:-66710364 None:intergenic
CGACCGGAAGATTCTCAAAT+GGG 0.487611 5.1:+66708522 MS.gene81671:CDS
AAGGTGTACTGATTCGGATA+TGG 0.497094 5.1:-66710172 None:intergenic
GAGAATTACTATACCATGCC+AGG 0.498472 5.1:+66710222 MS.gene81671:CDS
TATTACCACTAAGCTCAATC+AGG 0.501679 5.1:+66710470 MS.gene81671:CDS
AAAACACCAATTTCATATCA+GGG 0.503521 5.1:-66710497 None:intergenic
CCTGGGAGGGTTACCACCCA+TGG 0.510734 5.1:+66710347 MS.gene81671:CDS
TGGTGCTAGAAAGATATCCC+TGG 0.520711 5.1:+66710329 MS.gene81671:CDS
ACCCATGGGATGTTTGCCAT+TGG 0.522109 5.1:+66710362 MS.gene81671:CDS
AAATTGCTCCGTGCAACCGT+TGG 0.523069 5.1:-66708464 None:intergenic
GAGACTCCTCCGTTGATGCC+GGG 0.523625 5.1:+66708426 MS.gene81671:CDS
GTTCCAGCAATAATCGTGTT+CGG 0.526753 5.1:+66708404 MS.gene81671:CDS
GAGCTCCTGATTGAGCTTAG+TGG 0.529769 5.1:-66710475 None:intergenic
TTGTGATGCCCTTCCTGGCA+TGG 0.538947 5.1:-66710235 None:intergenic
TTTGAACAAGGTAAGTGCAA+AGG 0.543421 5.1:+66708382 MS.gene81671:CDS
AGTAACATACCATAGAGGTC+AGG 0.548702 5.1:-66710558 None:intergenic
TACTTGGGATCCAAGTAAGC+AGG 0.549355 5.1:-66708596 None:intergenic
AAATTTGTAGTTCTCTCCAA+TGG 0.550093 5.1:-66710378 None:intergenic
CCTTGAAAGTCACGTCCATA+CGG 0.564611 5.1:-66708491 None:intergenic
GATTCTGCTATGAAATCAGT+TGG 0.565554 5.1:-66708551 None:intergenic
TTTCAAGGCGGAAAAGCGAC+CGG 0.566456 5.1:+66708506 MS.gene81671:CDS
GCTACTGGAATGTTTGAGAT+GGG 0.566722 5.1:+66710698 MS.gene81671:CDS
GAATAGCTGAGAATTTCATA+AGG 0.571068 5.1:+66710292 MS.gene81671:CDS
AAATCTGAAATATTATACTT+GGG 0.571126 5.1:-66708611 None:intergenic
ATTACTATACCATGCCAGGA+AGG 0.575232 5.1:+66710226 MS.gene81671:CDS
GTTGTTGTTCCCGGCATCAA+CGG 0.579965 5.1:-66708435 None:intergenic
AGAAAAGTTTGGTACTGTTG+AGG 0.580826 5.1:-66710264 None:intergenic
ACTTCATTCCAACGGTTGCA+CGG 0.585179 5.1:+66708456 MS.gene81671:CDS
TCAGTACACCTTATGAGTAT+GGG 0.589424 5.1:+66710183 MS.gene81671:CDS
GCATGGTATAGTAATTCTCT+AGG 0.589788 5.1:-66710218 None:intergenic
TTACTATACCATGCCAGGAA+GGG 0.595748 5.1:+66710227 MS.gene81671:CDS
ATGGGTTATGCATGCAGCAG+GGG 0.597736 5.1:+66710716 MS.gene81671:CDS
CTGGGAGGGTTACCACCCAT+GGG 0.599154 5.1:+66710348 MS.gene81671:CDS
GGTGCTAGAAAGATATCCCT+GGG 0.601039 5.1:+66710330 MS.gene81671:CDS
AAAGAGGCACAAAATGTGAA+AGG 0.607423 5.1:-66708351 None:intergenic
TCCAATGGCAAACATCCCAT+GGG 0.610270 5.1:-66710363 None:intergenic
TAACATTGTTGCAAAGTATG+TGG 0.619153 5.1:+66710811 MS.gene81671:CDS
GATGGGTTATGCATGCAGCA+GGG 0.629763 5.1:+66710715 MS.gene81671:CDS
GTTGTTCCCGGCATCAACGG+AGG 0.634142 5.1:-66708432 None:intergenic
CTAGAAAGATATCCCTGGGA+GGG 0.636827 5.1:+66710334 MS.gene81671:CDS
AATGGCAAACATCCCATGGG+TGG 0.645847 5.1:-66710360 None:intergenic
AGGGTTTGAATCAGCCTCAG+TGG 0.649535 5.1:+66710667 MS.gene81671:intron
CATGGGTGGTAACCCTCCCA+GGG 0.659719 5.1:-66710346 None:intergenic
GAACAACAACTTCATTCCAA+CGG 0.663264 5.1:+66708448 MS.gene81671:CDS
CATTGTTGCAAAGTATGTGG+TGG 0.685608 5.1:+66710814 MS.gene81671:CDS
GTTGCAGTAACATACCATAG+AGG 0.695475 5.1:-66710563 None:intergenic
GAAGCAATTAGAGTACTACA+AGG 0.704539 5.1:+66710098 MS.gene81671:CDS
AGTAGCACAACATGCCACTG+AGG 0.730566 5.1:-66710681 None:intergenic
GCTAGAAAGATATCCCTGGG+AGG 0.731178 5.1:+66710333 MS.gene81671:CDS
TATGGACGTGACTTTCAAGG+CGG 0.774143 5.1:+66708494 MS.gene81671:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAATAAAATAAAAATATTA+TGG + chr5.1:66709896-66709915 MS.gene81671:intron 0.0%
!! AAGAAATTAAAAAAATTTAG+AGG - chr5.1:66709612-66709631 None:intergenic 10.0%
!! AATATTTATGAAAACTAATT+TGG + chr5.1:66709374-66709393 MS.gene81671:intron 10.0%
!! AGAAATTAAAAAAATTTAGA+GGG - chr5.1:66709611-66709630 None:intergenic 10.0%
!! ATATTTATGAAAACTAATTT+GGG + chr5.1:66709375-66709394 MS.gene81671:intron 10.0%
!! GTTAATTCAAAATAAATAAA+TGG + chr5.1:66709514-66709533 MS.gene81671:intron 10.0%
!!! AAAATTGTTTTGTTTTTAAT+TGG + chr5.1:66709072-66709091 MS.gene81671:intron 10.0%
!!! AAAATTTTTCATTTTGTTTT+TGG - chr5.1:66709787-66709806 None:intergenic 10.0%
!! ACAAATTAATTAAAAGGAAA+TGG - chr5.1:66709476-66709495 None:intergenic 15.0%
!! ATTAATATGAACATAAAGTA+GGG - chr5.1:66709637-66709656 None:intergenic 15.0%
!! TTTATGTTCATATTAATGTA+AGG + chr5.1:66709640-66709659 MS.gene81671:intron 15.0%
!!! AAAATCTGAAATATTATACT+TGG - chr5.1:66708615-66708634 None:intergenic 15.0%
!!! AAATCTGAAATATTATACTT+GGG - chr5.1:66708614-66708633 None:intergenic 15.0%
!!! AATATTTTTCTTTTGTTAAC+AGG + chr5.1:66710647-66710666 MS.gene81671:intron 15.0%
!!! ATATTTTTCTTTTGTTAACA+GGG + chr5.1:66710648-66710667 MS.gene81671:intron 15.0%
!!! CAATTTTTTTTAAACTCATT+TGG - chr5.1:66709059-66709078 None:intergenic 15.0%
!!! CTCTAAAAATATAGTAAATT+TGG - chr5.1:66709848-66709867 None:intergenic 15.0%
!! AAAAAAAAAAGTGAAGTAAG+TGG - chr5.1:66708845-66708864 None:intergenic 20.0%
!! ATTTATAATGTGCTTCATAA+TGG - chr5.1:66710624-66710643 None:intergenic 20.0%
!! ATTTGGTCATAAAATTATGA+TGG + chr5.1:66709134-66709153 MS.gene81671:intron 20.0%
!! CATTAATATGAACATAAAGT+AGG - chr5.1:66709638-66709657 None:intergenic 20.0%
!! TCAGTCTCTTAAAAATAAAA+CGG + chr5.1:66709575-66709594 MS.gene81671:intron 20.0%
!! TCATAAATATTTAAAGACAC+CGG - chr5.1:66709365-66709384 None:intergenic 20.0%
!! TGAAATCAAAATTCACTTTA+TGG - chr5.1:66709558-66709577 None:intergenic 20.0%
!!! AGTTATATTTTCCACAAATA+TGG + chr5.1:66709297-66709316 MS.gene81671:intron 20.0%
!!! ATTTTAAAAGTATATGTGTG+TGG + chr5.1:66709920-66709939 MS.gene81671:intron 20.0%
!!! CAAAATGAAAAATTTTTCGA+AGG + chr5.1:66709791-66709810 MS.gene81671:intron 20.0%
!!! TACAATACATGTTTAGTTTT+AGG + chr5.1:66708753-66708772 MS.gene81671:intron 20.0%
!!! TTTAGAGTTTAATAAGTTCT+TGG - chr5.1:66709872-66709891 None:intergenic 20.0%
!!! TTTTAGGAACTTTTTTTGTT+TGG + chr5.1:66708769-66708788 MS.gene81671:intron 20.0%
!!! TTTTTTTTCATGCAAGATTT+TGG + chr5.1:66708858-66708877 MS.gene81671:intron 20.0%
! AAAACACCAATTTCATATCA+GGG - chr5.1:66710500-66710519 None:intergenic 25.0%
! AAGAATCTAAGTTCATATCT+TGG + chr5.1:66710129-66710148 MS.gene81671:CDS 25.0%
! AAGTGCTATGTTATTAAAGT+TGG - chr5.1:66710427-66710446 None:intergenic 25.0%
! ACATTTCTTGAACACAATAT+GGG - chr5.1:66709731-66709750 None:intergenic 25.0%
! ACTGAAAACAAGAAATGTAA+AGG + chr5.1:66708929-66708948 MS.gene81671:intron 25.0%
! ATGTGCAACATAATGTAATA+GGG - chr5.1:66710528-66710547 None:intergenic 25.0%
! CAGTCTCTTAAAAATAAAAC+GGG + chr5.1:66709576-66709595 MS.gene81671:intron 25.0%
! CTGAAAACAAGAAATGTAAA+GGG + chr5.1:66708930-66708949 MS.gene81671:intron 25.0%
! GTCAAAAATTATGTCCATTA+GGG + chr5.1:66709760-66709779 MS.gene81671:intron 25.0%
! TGAAAACAAGAAATGTAAAG+GGG + chr5.1:66708931-66708950 MS.gene81671:intron 25.0%
! TGTACAAAAATTGATGAGAA+GGG + chr5.1:66709173-66709192 MS.gene81671:intron 25.0%
! TGTCAAAAATTATGTCCATT+AGG + chr5.1:66709759-66709778 MS.gene81671:intron 25.0%
! TGTTCAAATGAAACAAAAAG+AGG - chr5.1:66708370-66708389 None:intergenic 25.0%
! TTGTACAAAAATTGATGAGA+AGG + chr5.1:66709172-66709191 MS.gene81671:intron 25.0%
! TTTATACGTTTCCATATTTG+TGG - chr5.1:66709311-66709330 None:intergenic 25.0%
!! AATATTTCAGATTTTGCAAC+TGG + chr5.1:66708620-66708639 MS.gene81671:CDS 25.0%
!! ATATTTCAGATTTTGCAACT+GGG + chr5.1:66708621-66708640 MS.gene81671:CDS 25.0%
!! GAGAGAACTACAAATTTTAT+GGG + chr5.1:66710384-66710403 MS.gene81671:CDS 25.0%
!! GATATGAACTTAGATTCTTT+TGG - chr5.1:66710128-66710147 None:intergenic 25.0%
!!! AATGTTATTTGTTTTCTCTG+TGG - chr5.1:66710798-66710817 None:intergenic 25.0%
!!! ATGTTATTTGTTTTCTCTGT+GGG - chr5.1:66710797-66710816 None:intergenic 25.0%
!!! CTTTTTGTTTCATTTGAACA+AGG + chr5.1:66708370-66708389 MS.gene81671:CDS 25.0%
!!! TTTTTGCTATAGTAGAAACA+TGG - chr5.1:66709407-66709426 None:intergenic 25.0%
AAATTTGTAGTTCTCTCCAA+TGG - chr5.1:66710381-66710400 None:intergenic 30.0%
ATAAAAAAACCTGACCTCTA+TGG + chr5.1:66710549-66710568 MS.gene81671:CDS 30.0%
ATAAGGAATCTATATGCTCT+TGG + chr5.1:66710309-66710328 MS.gene81671:CDS 30.0%
ATTGTGTTCAAGAAATGTCA+TGG + chr5.1:66709733-66709752 MS.gene81671:intron 30.0%
GAAAACACCAATTTCATATC+AGG - chr5.1:66710501-66710520 None:intergenic 30.0%
GAATAGCTGAGAATTTCATA+AGG + chr5.1:66710292-66710311 MS.gene81671:CDS 30.0%
GACATTTCTTGAACACAATA+TGG - chr5.1:66709732-66709751 None:intergenic 30.0%
GATGTGCAACATAATGTAAT+AGG - chr5.1:66710529-66710548 None:intergenic 30.0%
GTTTGAGTATTAAGAGAAGA+TGG - chr5.1:66708707-66708726 None:intergenic 30.0%
TAACATTGTTGCAAAGTATG+TGG + chr5.1:66710811-66710830 MS.gene81671:CDS 30.0%
TACTCTAATTGCTTCCATAA+TGG - chr5.1:66710093-66710112 None:intergenic 30.0%
! ACAAATTTTATGGGTCAGAA+TGG + chr5.1:66710393-66710412 MS.gene81671:CDS 30.0%
! ATGCTTCAAAGTTTGTCTTT+TGG + chr5.1:66710759-66710778 MS.gene81671:CDS 30.0%
! GATTTCATAGCAGAATCTTT+TGG + chr5.1:66708557-66708576 MS.gene81671:CDS 30.0%
! GGAGAGAACTACAAATTTTA+TGG + chr5.1:66710383-66710402 MS.gene81671:CDS 30.0%
! TATTTCAGATTTTGCAACTG+GGG + chr5.1:66708622-66708641 MS.gene81671:CDS 30.0%
! TGCTTCAAAGTTTGTCTTTT+GGG + chr5.1:66710760-66710779 MS.gene81671:CDS 30.0%
!! ACTCTTGTTATTGTTTCTCT+AGG + chr5.1:66708994-66709013 MS.gene81671:intron 30.0%
!! AGACACATTTTGAAGATACA+AGG - chr5.1:66709673-66709692 None:intergenic 30.0%
!! GACACATTTTGAAGATACAA+GGG - chr5.1:66709672-66709691 None:intergenic 30.0%
!!! ATTTTGTTTTTGGTCCCTAA+TGG - chr5.1:66709777-66709796 None:intergenic 30.0%
!!! TTCTTGTTTTCAGTTTCACT+TGG - chr5.1:66708923-66708942 None:intergenic 30.0%
AGAAAAGTTTGGTACTGTTG+AGG - chr5.1:66710267-66710286 None:intergenic 35.0%
ATCAGTACACCTTATGAGTA+TGG + chr5.1:66710182-66710201 MS.gene81671:CDS 35.0%
CTATTCCAGCAAGAAAAGTT+TGG - chr5.1:66710278-66710297 None:intergenic 35.0%
GAACAACAACTTCATTCCAA+CGG + chr5.1:66708448-66708467 MS.gene81671:CDS 35.0%
GATTCTGCTATGAAATCAGT+TGG - chr5.1:66708554-66708573 None:intergenic 35.0%
GCATGGTATAGTAATTCTCT+AGG - chr5.1:66710221-66710240 None:intergenic 35.0%
TATTACCACTAAGCTCAATC+AGG + chr5.1:66710470-66710489 MS.gene81671:CDS 35.0%
TCAGTACACCTTATGAGTAT+GGG + chr5.1:66710183-66710202 MS.gene81671:CDS 35.0%
TTGAACACAATATGGGCATA+CGG - chr5.1:66709724-66709743 None:intergenic 35.0%
TTTGAACAAGGTAAGTGCAA+AGG + chr5.1:66708382-66708401 MS.gene81671:CDS 35.0%
! AAAGAGGCACAAAATGTGAA+AGG - chr5.1:66708354-66708373 None:intergenic 35.0%
! GAAGCAATTAGAGTACTACA+AGG + chr5.1:66710098-66710117 MS.gene81671:CDS 35.0%
! GATTTAGTTCCTAAAAACCC+AGG - chr5.1:66709826-66709845 None:intergenic 35.0%
! TGAAAACATCCTGGGTTTTT+AGG + chr5.1:66709814-66709833 MS.gene81671:intron 35.0%
!! ACTCATAAGGTGTACTGATT+CGG - chr5.1:66710181-66710200 None:intergenic 35.0%
!! TATTTGTTTTCTCTGTGGGA+TGG - chr5.1:66710793-66710812 None:intergenic 35.0%
AGAATTTGTGCCTGCTTACT+TGG + chr5.1:66708586-66708605 MS.gene81671:CDS 40.0%
AGTAACATACCATAGAGGTC+AGG - chr5.1:66710561-66710580 None:intergenic 40.0%
ATTACTATACCATGCCAGGA+AGG + chr5.1:66710226-66710245 MS.gene81671:CDS 40.0%
ATTTAAAGACACCGGTGTGA+TGG - chr5.1:66709357-66709376 None:intergenic 40.0%
CATTGTTGCAAAGTATGTGG+TGG + chr5.1:66710814-66710833 MS.gene81671:CDS 40.0%
CGTTTGTTCCCATACTCATA+AGG - chr5.1:66710194-66710213 None:intergenic 40.0%
GAGAAACAGAGAAGAAGCAA+AGG - chr5.1:66709948-66709967 None:intergenic 40.0%
GAGAATTACTATACCATGCC+AGG + chr5.1:66710222-66710241 MS.gene81671:CDS 40.0%
GTACATTTCATCCATCACAC+CGG + chr5.1:66709343-66709362 MS.gene81671:intron 40.0%
GTTCCAGCAATAATCGTGTT+CGG + chr5.1:66708404-66708423 MS.gene81671:CDS 40.0%
GTTGCAGTAACATACCATAG+AGG - chr5.1:66710566-66710585 None:intergenic 40.0%
TCTCCCATTTGAGAATCTTC+CGG - chr5.1:66708528-66708547 None:intergenic 40.0%
TGAACACAATATGGGCATAC+GGG - chr5.1:66709723-66709742 None:intergenic 40.0%
TGCAGTCTGTGATACCATTA+TGG + chr5.1:66710076-66710095 MS.gene81671:intron 40.0%
TGCTACTGGAATGTTTGAGA+TGG + chr5.1:66710697-66710716 MS.gene81671:CDS 40.0%
TTACTATACCATGCCAGGAA+GGG + chr5.1:66710227-66710246 MS.gene81671:CDS 40.0%
TTCGAAGGTGAAAACATCCT+GGG + chr5.1:66709806-66709825 MS.gene81671:intron 40.0%
TTTCGAAGGTGAAAACATCC+TGG + chr5.1:66709805-66709824 MS.gene81671:intron 40.0%
! CAGTACCAAACTTTTCTTGC+TGG + chr5.1:66710270-66710289 MS.gene81671:CDS 40.0%
! GCTACTGGAATGTTTGAGAT+GGG + chr5.1:66710698-66710717 MS.gene81671:CDS 40.0%
! GGATATGGTCTCTTTTGCTT+TGG - chr5.1:66710160-66710179 None:intergenic 40.0%
! TGGAATGAAGTTGTTGTTCC+CGG - chr5.1:66708447-66708466 None:intergenic 40.0%
!! AAGGTGTACTGATTCGGATA+TGG - chr5.1:66710175-66710194 None:intergenic 40.0%
ACTTCATTCCAACGGTTGCA+CGG + chr5.1:66708456-66708475 MS.gene81671:CDS 45.0%
CCTTGAAAGTCACGTCCATA+CGG - chr5.1:66708494-66708513 None:intergenic 45.0%
CGACCGGAAGATTCTCAAAT+GGG + chr5.1:66708522-66708541 MS.gene81671:CDS 45.0%
CTAGAAAGATATCCCTGGGA+GGG + chr5.1:66710334-66710353 MS.gene81671:CDS 45.0%
GAACACAATATGGGCATACG+GGG - chr5.1:66709722-66709741 None:intergenic 45.0%
GGAGCTCCCTGATATGAAAT+TGG + chr5.1:66710491-66710510 MS.gene81671:CDS 45.0%
GGTGCTAGAAAGATATCCCT+GGG + chr5.1:66710330-66710349 MS.gene81671:CDS 45.0%
TACTTGGGATCCAAGTAAGC+AGG - chr5.1:66708599-66708618 None:intergenic 45.0%
TATGGACGTGACTTTCAAGG+CGG + chr5.1:66708494-66708513 MS.gene81671:CDS 45.0%
TCCAATGGCAAACATCCCAT+GGG - chr5.1:66710366-66710385 None:intergenic 45.0%
TCTCCGAACACGATTATTGC+TGG - chr5.1:66708410-66708429 None:intergenic 45.0%
! AGTTTTGCTTCTGCTGCTAC+TGG + chr5.1:66708647-66708666 MS.gene81671:CDS 45.0%
! TGGTGCTAGAAAGATATCCC+TGG + chr5.1:66710329-66710348 MS.gene81671:CDS 45.0%
!!! GTTTTAAAAATTAAAAAATT+TGG + chr5.1:66709117-66709136 MS.gene81671:intron 5.0%
!!! TTTTATACAAATTAATTAAA+AGG - chr5.1:66709482-66709501 None:intergenic 5.0%
AAATTGCTCCGTGCAACCGT+TGG - chr5.1:66708467-66708486 None:intergenic 50.0%
AATGGCAAACATCCCATGGG+TGG - chr5.1:66710363-66710382 None:intergenic 50.0%
ACCCATGGGATGTTTGCCAT+TGG + chr5.1:66710362-66710381 MS.gene81671:CDS 50.0%
AGGGTTTGAATCAGCCTCAG+TGG + chr5.1:66710667-66710686 MS.gene81671:intron 50.0%
AGTAGCACAACATGCCACTG+AGG - chr5.1:66710684-66710703 None:intergenic 50.0%
CCGTATGGACGTGACTTTCA+AGG + chr5.1:66708491-66708510 MS.gene81671:CDS 50.0%
CTCCAATGGCAAACATCCCA+TGG - chr5.1:66710367-66710386 None:intergenic 50.0%
GAGCTCCTGATTGAGCTTAG+TGG - chr5.1:66710478-66710497 None:intergenic 50.0%
GCGACCGGAAGATTCTCAAA+TGG + chr5.1:66708521-66708540 MS.gene81671:CDS 50.0%
GCTAGAAAGATATCCCTGGG+AGG + chr5.1:66710333-66710352 MS.gene81671:CDS 50.0%
GTGTATTGTGATGCCCTTCC+TGG - chr5.1:66710243-66710262 None:intergenic 50.0%
TCAGTGGCATGTTGTGCTAC+TGG + chr5.1:66710683-66710702 MS.gene81671:CDS 50.0%
TTTCAAGGCGGAAAAGCGAC+CGG + chr5.1:66708506-66708525 MS.gene81671:CDS 50.0%
! ATGGGTTATGCATGCAGCAG+GGG + chr5.1:66710716-66710735 MS.gene81671:CDS 50.0%
! CGGAGCAATTTTCAGCCGTA+TGG + chr5.1:66708476-66708495 MS.gene81671:CDS 50.0%
! GTTGTTGTTCCCGGCATCAA+CGG - chr5.1:66708438-66708457 None:intergenic 50.0%
!! AGATGGGTTATGCATGCAGC+AGG + chr5.1:66710714-66710733 MS.gene81671:CDS 50.0%
!! GATGGGTTATGCATGCAGCA+GGG + chr5.1:66710715-66710734 MS.gene81671:CDS 50.0%
TTGTGATGCCCTTCCTGGCA+TGG - chr5.1:66710238-66710257 None:intergenic 55.0%
CATGGGTGGTAACCCTCCCA+GGG - chr5.1:66710349-66710368 None:intergenic 60.0%
CTGGGAGGGTTACCACCCAT+GGG + chr5.1:66710348-66710367 MS.gene81671:CDS 60.0%
GAGACTCCTCCGTTGATGCC+GGG + chr5.1:66708426-66708445 MS.gene81671:CDS 60.0%
GGAGACTCCTCCGTTGATGC+CGG + chr5.1:66708425-66708444 MS.gene81671:CDS 60.0%
GTTGTTCCCGGCATCAACGG+AGG - chr5.1:66708435-66708454 None:intergenic 60.0%
CCATGGGTGGTAACCCTCCC+AGG - chr5.1:66710350-66710369 None:intergenic 65.0%
CCTGGGAGGGTTACCACCCA+TGG + chr5.1:66710347-66710366 MS.gene81671:CDS 65.0%


Chromosome Type Strat End Strand Name
chr5.1 gene 66708317 66710865 66708317 ID=MS.gene81671
chr5.1 mRNA 66708317 66710865 66708317 ID=MS.gene81671.t1;Parent=MS.gene81671
chr5.1 exon 66708317 66708697 66708317 ID=MS.gene81671.t1.exon1;Parent=MS.gene81671.t1
chr5.1 CDS 66708317 66708697 66708317 ID=cds.MS.gene81671.t1;Parent=MS.gene81671.t1
chr5.1 exon 66710081 66710570 66710081 ID=MS.gene81671.t1.exon2;Parent=MS.gene81671.t1
chr5.1 CDS 66710081 66710570 66710081 ID=cds.MS.gene81671.t1;Parent=MS.gene81671.t1
chr5.1 exon 66710669 66710865 66710669 ID=MS.gene81671.t1.exon3;Parent=MS.gene81671.t1
chr5.1 CDS 66710669 66710865 66710669 ID=cds.MS.gene81671.t1;Parent=MS.gene81671.t1
Gene Sequence

>MS.gene81671

ATGGAATTTCAATCAAAGCTACTTGCATTATGCTCCTTTCACATTTTGTGCCTCTTTTTGTTTCATTTGAACAAGGTAAGTGCAAAGGTTCCAGCAATAATCGTGTTCGGAGACTCCTCCGTTGATGCCGGGAACAACAACTTCATTCCAACGGTTGCACGGAGCAATTTTCAGCCGTATGGACGTGACTTTCAAGGCGGAAAAGCGACCGGAAGATTCTCAAATGGGAGAATACCAACTGATTTCATAGCAGAATCTTTTGGTATAAAAGAATTTGTGCCTGCTTACTTGGATCCCAAGTATAATATTTCAGATTTTGCAACTGGGGTCAGTTTTGCTTCTGCTGCTACTGGTTATGATAATGCAACTTCAGATGTACTTGTAAGTCCATCTTCTCTTAATACTCAAACTAGTGATATATGAGAGTTCAAGTGCATACAATACATGTTTAGTTTTAGGAACTTTTTTTGTTTGGAAATACTAAAAACTTTGTACTTTCTATTTGTAATGTAAAATTAAAATTTTCCACTTACTTCACTTTTTTTTTTTCATGCAAGATTTTGGAAAATTTTAATTTTACTTTACAAGATATGTGAAATTTTTCCAAGTGAAACTGAAAACAAGAAATGTAAAGGGGATATCAAAAGAAAACAAAAGTTCTTACTTTTTCAATAATCACTCTTGTTATTGTTTCTCTAGGCATTAATCTTGTTCGTAAATTTTTAATTTTTCAATATCACCAAATGAGTTTAAAAAAAATTGTTTTGTTTTTAATTGGTCATAAAATTATTGAGTTTTTAGTTTTAAAAATTAAAAAATTTGGTCATAAAATTATGATGGTAACATTCTCGAATTTTGTACAAAAATTGATGAGAAGGGACGTTTTATCTTTAAAAAAATGTCAAACTATTTCTTGTACTTTATTTTATAAAAGAACTTCACAAACAATCTCAAGTGTCGCTTTATTAAAGACTATTTTTAGTTATATTTTCCACAAATATGGAAACGTATAAAATAGACATAAAAGTACATTTCATCCATCACACCGGTGTCTTTAAATATTTATGAAAACTAATTTGGGATTCAACCATGTTTCTACTATAGCAAAAAGCTTAGATCTTACTATACGTTCTTAATTTTCATTTTACTAGTCAGTCCATTTCCTTTTAATTAATTTGTATAAAATATATATGTATAGTTAATTCAAAATAAATAAATGGCTTAAATAAAATTTTCATCCATAAAGTGAATTTTGATTTCAGTCTCTTAAAAATAAAACGGGATGTTTTCACCCTCTAAATTTTTTTAATTTCTTGTCCCTACTTTATGTTCATATTAATGTAAGGTTACGACCCTTGTATCTTCAAAATGTGTCTAAGTTGTGTTCATCTTTTATGTCTAACCCCGTATGCCCATATTGTGTTCAAGAAATGTCATGGACATGTCAAAAATTATGTCCATTAGGGACCAAAAACAAAATGAAAAATTTTTCGAAGGTGAAAACATCCTGGGTTTTTAGGAACTAAATCCAAATTTACTATATTTTTAGAGACCAAGAACTTATTAAACTCTAAAACAATTAATAAAATAAAAATATTATGGCATTTTAAAAGTATATGTGTGTGGTTCCTTTGCTTCTTCTCTGTTTCTCTGTCTTTCATAAGAAAACTGAAATGATTTACATGTTTGATTAAAAAAAAATAGCTTATGATTTATACTGATTTAACATATATAATAATGCAAAATATATGAAATTTGATGCAGTCTGTGATACCATTATGGAAGCAATTAGAGTACTACAAGGACTACCAAAAGAATCTAAGTTCATATCTTGGTGAAACCAAAGCAAAAGAGACCATATCCGAATCAGTACACCTTATGAGTATGGGAACAAACGATTTCCTAGAGAATTACTATACCATGCCAGGAAGGGCATCACAATACACACCTCAACAGTACCAAACTTTTCTTGCTGGAATAGCTGAGAATTTCATAAGGAATCTATATGCTCTTGGTGCTAGAAAGATATCCCTGGGAGGGTTACCACCCATGGGATGTTTGCCATTGGAGAGAACTACAAATTTTATGGGTCAGAATGGTTGTGTTGCCAACTTTAATAACATAGCACTTGAGTTCAATGATAAGCTCAAGAATATTACCACTAAGCTCAATCAGGAGCTCCCTGATATGAAATTGGTGTTTTCAAATCCCTATTACATTATGTTGCACATCATAAAAAAACCTGACCTCTATGGTATGTTACTGCAACAGATAATATAATTTAATATTTTTCTATATAAATTACCATTATGAAGCACATTATAAATTTAAATATTTTTCTTTTGTTAACAGGGTTTGAATCAGCCTCAGTGGCATGTTGTGCTACTGGAATGTTTGAGATGGGTTATGCATGCAGCAGGGGCAGCATGTTCAGTTGCACAGATGCTTCAAAGTTTGTCTTTTGGGACTCTTTCCATCCCACAGAGAAAACAAATAACATTGTTGCAAAGTATGTGGTGGAGCATGTGTTAGCTCAATTTTTAGAATAA

Protein sequence

>MS.gene81671.t1

MEFQSKLLALCSFHILCLFLFHLNKVSAKVPAIIVFGDSSVDAGNNNFIPTVARSNFQPYGRDFQGGKATGRFSNGRIPTDFIAESFGIKEFVPAYLDPKYNISDFATGVSFASAATGYDNATSDVLSVIPLWKQLEYYKDYQKNLSSYLGETKAKETISESVHLMSMGTNDFLENYYTMPGRASQYTPQQYQTFLAGIAENFIRNLYALGARKISLGGLPPMGCLPLERTTNFMGQNGCVANFNNIALEFNDKLKNITTKLNQELPDMKLVFSNPYYIMLHIIKKPDLYGFESASVACCATGMFEMGYACSRGSMFSCTDASKFVFWDSFHPTEKTNNIVAKYVVEHVLAQFLE