Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87056.t1 | XP_003623567.1 | 86.9 | 312 | 15 | 1 | 1 | 286 | 1 | 312 | 1.70E-142 | 515.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87056.t1 | P22195 | 61.5 | 312 | 94 | 1 | 1 | 286 | 5 | 316 | 2.1e-101 | 370.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87056.t1 | G7KX25 | 86.9 | 312 | 15 | 1 | 1 | 286 | 1 | 312 | 1.2e-142 | 515.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04932 | MS.gene87056 | 0.808144 | 3.58E-50 | -1.69E-46 |
| MS.gene049549 | MS.gene87056 | 0.874969 | 4.46E-68 | -1.69E-46 |
| MS.gene049634 | MS.gene87056 | 0.825062 | 5.75E-54 | -1.69E-46 |
| MS.gene050095 | MS.gene87056 | 0.831848 | 1.32E-55 | -1.69E-46 |
| MS.gene050096 | MS.gene87056 | 0.851322 | 9.57E-61 | -1.69E-46 |
| MS.gene050329 | MS.gene87056 | 0.803082 | 4.13E-49 | -1.69E-46 |
| MS.gene050720 | MS.gene87056 | 0.811229 | 7.77E-51 | -1.69E-46 |
| MS.gene05104 | MS.gene87056 | 0.807551 | 4.78E-50 | -1.69E-46 |
| MS.gene051131 | MS.gene87056 | 0.824982 | 6.01E-54 | -1.69E-46 |
| MS.gene051158 | MS.gene87056 | 0.810424 | 1.16E-50 | -1.69E-46 |
| MS.gene052211 | MS.gene87056 | 0.861927 | 7.27E-64 | -1.69E-46 |
| MS.gene052212 | MS.gene87056 | 0.812924 | 3.32E-51 | -1.69E-46 |
| MS.gene05240 | MS.gene87056 | 0.854616 | 1.09E-61 | -1.69E-46 |
| MS.gene05244 | MS.gene87056 | 0.826376 | 2.81E-54 | -1.69E-46 |
| MS.gene052606 | MS.gene87056 | 0.828495 | 8.71E-55 | -1.69E-46 |
| MS.gene052702 | MS.gene87056 | 0.815889 | 7.33E-52 | -1.69E-46 |
| MS.gene052705 | MS.gene87056 | 0.805067 | 1.60E-49 | -1.69E-46 |
| MS.gene052706 | MS.gene87056 | 0.803518 | 3.36E-49 | -1.69E-46 |
| MS.gene053030 | MS.gene87056 | 0.807267 | 5.49E-50 | -1.69E-46 |
| MS.gene053031 | MS.gene87056 | 0.84604 | 2.79E-59 | -1.69E-46 |
| MS.gene053033 | MS.gene87056 | 0.824546 | 7.61E-54 | -1.69E-46 |
| MS.gene053403 | MS.gene87056 | 0.847018 | 1.51E-59 | -1.69E-46 |
| MS.gene053406 | MS.gene87056 | 0.886712 | 2.69E-72 | -1.69E-46 |
| MS.gene053887 | MS.gene87056 | 0.826936 | 2.06E-54 | -1.69E-46 |
| MS.gene054146 | MS.gene87056 | 0.850965 | 1.21E-60 | -1.69E-46 |
| MS.gene054181 | MS.gene87056 | 0.85722 | 1.89E-62 | -1.69E-46 |
| MS.gene054277 | MS.gene87056 | 0.834812 | 2.41E-56 | -1.69E-46 |
| MS.gene054290 | MS.gene87056 | 0.811337 | 7.36E-51 | -1.69E-46 |
| MS.gene054421 | MS.gene87056 | 0.81977 | 9.75E-53 | -1.69E-46 |
| MS.gene054742 | MS.gene87056 | 0.859072 | 5.32E-63 | -1.69E-46 |
| MS.gene05483 | MS.gene87056 | 0.834151 | 3.54E-56 | -1.69E-46 |
| MS.gene054884 | MS.gene87056 | 0.803696 | 3.08E-49 | -1.69E-46 |
| MS.gene055124 | MS.gene87056 | 0.81075 | 9.87E-51 | -1.69E-46 |
| MS.gene055154 | MS.gene87056 | 0.814588 | 1.43E-51 | -1.69E-46 |
| MS.gene055240 | MS.gene87056 | 0.860422 | 2.09E-63 | -1.69E-46 |
| MS.gene055289 | MS.gene87056 | -0.802025 | 6.82E-49 | -1.69E-46 |
| MS.gene055601 | MS.gene87056 | 0.828369 | 9.34E-55 | -1.69E-46 |
| MS.gene055959 | MS.gene87056 | 0.802579 | 5.25E-49 | -1.69E-46 |
| MS.gene056076 | MS.gene87056 | 0.813825 | 2.10E-51 | -1.69E-46 |
| MS.gene056218 | MS.gene87056 | 0.840605 | 7.86E-58 | -1.69E-46 |
| MS.gene056224 | MS.gene87056 | 0.816969 | 4.21E-52 | -1.69E-46 |
| MS.gene056330 | MS.gene87056 | 0.815334 | 9.75E-52 | -1.69E-46 |
| MS.gene056590 | MS.gene87056 | 0.834131 | 3.58E-56 | -1.69E-46 |
| MS.gene056591 | MS.gene87056 | 0.833934 | 4.01E-56 | -1.69E-46 |
| MS.gene056715 | MS.gene87056 | 0.80776 | 4.32E-50 | -1.69E-46 |
| MS.gene056748 | MS.gene87056 | 0.833609 | 4.83E-56 | -1.69E-46 |
| MS.gene056856 | MS.gene87056 | 0.809769 | 1.61E-50 | -1.69E-46 |
| MS.gene056899 | MS.gene87056 | 0.809216 | 2.11E-50 | -1.69E-46 |
| MS.gene056920 | MS.gene87056 | 0.842663 | 2.25E-58 | -1.69E-46 |
| MS.gene056922 | MS.gene87056 | 0.826759 | 2.27E-54 | -1.69E-46 |
| MS.gene057261 | MS.gene87056 | 0.81685 | 4.47E-52 | -1.69E-46 |
| MS.gene057544 | MS.gene87056 | 0.851308 | 9.66E-61 | -1.69E-46 |
| MS.gene057547 | MS.gene87056 | 0.817843 | 2.67E-52 | -1.69E-46 |
| MS.gene057550 | MS.gene87056 | 0.824367 | 8.39E-54 | -1.69E-46 |
| MS.gene057820 | MS.gene87056 | 0.811398 | 7.14E-51 | -1.69E-46 |
| MS.gene058177 | MS.gene87056 | 0.814767 | 1.30E-51 | -1.69E-46 |
| MS.gene058218 | MS.gene87056 | 0.813305 | 2.74E-51 | -1.69E-46 |
| MS.gene058603 | MS.gene87056 | 0.850905 | 1.25E-60 | -1.69E-46 |
| MS.gene059043 | MS.gene87056 | 0.815878 | 7.38E-52 | -1.69E-46 |
| MS.gene059265 | MS.gene87056 | 0.806236 | 9.07E-50 | -1.69E-46 |
| MS.gene059402 | MS.gene87056 | 0.851369 | 9.29E-61 | -1.69E-46 |
| MS.gene059892 | MS.gene87056 | 0.825008 | 5.92E-54 | -1.69E-46 |
| MS.gene059953 | MS.gene87056 | 0.847808 | 9.15E-60 | -1.69E-46 |
| MS.gene059955 | MS.gene87056 | 0.859874 | 3.06E-63 | -1.69E-46 |
| MS.gene060087 | MS.gene87056 | 0.841284 | 5.22E-58 | -1.69E-46 |
| MS.gene060593 | MS.gene87056 | 0.80876 | 2.64E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87056.t1 | MTR_7g072510 | 86.859 | 312 | 15 | 1 | 1 | 286 | 1 | 312 | 0.0 | 535 |
| MS.gene87056.t1 | MTR_7g072480 | 65.064 | 312 | 83 | 1 | 1 | 286 | 5 | 316 | 1.61e-146 | 414 |
| MS.gene87056.t1 | MTR_3g466180 | 60.328 | 305 | 95 | 1 | 8 | 286 | 19 | 323 | 3.63e-115 | 334 |
| MS.gene87056.t1 | MTR_3g094650 | 54.397 | 307 | 112 | 2 | 8 | 286 | 16 | 322 | 1.26e-113 | 330 |
| MS.gene87056.t1 | MTR_5g083860 | 54.072 | 307 | 113 | 2 | 8 | 286 | 19 | 325 | 1.64e-113 | 330 |
| MS.gene87056.t1 | MTR_4g029190 | 50.610 | 328 | 113 | 4 | 8 | 286 | 13 | 340 | 1.78e-110 | 323 |
| MS.gene87056.t1 | MTR_2g084080 | 51.133 | 309 | 125 | 1 | 4 | 286 | 9 | 317 | 3.87e-110 | 321 |
| MS.gene87056.t1 | MTR_4g029200 | 49.091 | 330 | 121 | 2 | 4 | 286 | 9 | 338 | 5.79e-110 | 322 |
| MS.gene87056.t1 | MTR_2g084110 | 53.041 | 296 | 113 | 1 | 17 | 286 | 22 | 317 | 1.03e-109 | 320 |
| MS.gene87056.t1 | MTR_2g084020 | 53.716 | 296 | 110 | 2 | 18 | 286 | 23 | 318 | 1.05e-109 | 320 |
| MS.gene87056.t1 | MTR_2g084010 | 51.935 | 310 | 122 | 2 | 4 | 286 | 9 | 318 | 1.50e-109 | 320 |
| MS.gene87056.t1 | MTR_1g115900 | 52.751 | 309 | 115 | 5 | 8 | 286 | 14 | 321 | 1.41e-108 | 318 |
| MS.gene87056.t1 | MTR_3g466200 | 52.244 | 312 | 120 | 4 | 4 | 286 | 9 | 320 | 7.23e-108 | 316 |
| MS.gene87056.t1 | MTR_3g094670 | 53.185 | 314 | 119 | 2 | 1 | 286 | 9 | 322 | 3.63e-107 | 314 |
| MS.gene87056.t1 | MTR_3g072190 | 53.401 | 294 | 111 | 1 | 19 | 286 | 25 | 318 | 4.51e-106 | 311 |
| MS.gene87056.t1 | MTR_3g094630 | 53.822 | 314 | 115 | 3 | 1 | 286 | 11 | 322 | 1.04e-104 | 308 |
| MS.gene87056.t1 | MTR_7g026990 | 53.716 | 296 | 109 | 3 | 18 | 286 | 28 | 322 | 1.46e-104 | 307 |
| MS.gene87056.t1 | MTR_5g074970 | 53.512 | 299 | 109 | 3 | 18 | 286 | 28 | 326 | 2.39e-103 | 304 |
| MS.gene87056.t1 | MTR_2g084000 | 48.220 | 309 | 131 | 3 | 5 | 286 | 13 | 319 | 8.18e-103 | 303 |
| MS.gene87056.t1 | MTR_3g072190 | 61.066 | 244 | 95 | 0 | 43 | 286 | 8 | 251 | 1.03e-102 | 300 |
| MS.gene87056.t1 | MTR_4g029170 | 51.186 | 295 | 116 | 3 | 20 | 286 | 27 | 321 | 4.69e-99 | 293 |
| MS.gene87056.t1 | MTR_2g084090 | 50.338 | 296 | 120 | 2 | 18 | 286 | 23 | 318 | 4.80e-99 | 293 |
| MS.gene87056.t1 | MTR_4g083710 | 49.371 | 318 | 127 | 5 | 3 | 286 | 7 | 324 | 8.60e-98 | 290 |
| MS.gene87056.t1 | MTR_4g029180 | 48.630 | 292 | 122 | 3 | 23 | 286 | 30 | 321 | 1.70e-93 | 279 |
| MS.gene87056.t1 | MTR_4g074995 | 48.562 | 313 | 116 | 6 | 5 | 286 | 10 | 308 | 9.75e-91 | 272 |
| MS.gene87056.t1 | MTR_3g467600 | 49.169 | 301 | 122 | 5 | 17 | 286 | 24 | 324 | 2.11e-90 | 271 |
| MS.gene87056.t1 | MTR_5g074760 | 46.519 | 316 | 134 | 6 | 5 | 286 | 7 | 321 | 3.56e-90 | 271 |
| MS.gene87056.t1 | MTR_5g074740 | 48.333 | 300 | 123 | 5 | 18 | 286 | 23 | 321 | 2.12e-89 | 269 |
| MS.gene87056.t1 | MTR_4g074990 | 48.013 | 302 | 112 | 4 | 15 | 286 | 19 | 305 | 4.09e-89 | 268 |
| MS.gene87056.t1 | MTR_5g074710 | 45.886 | 316 | 136 | 6 | 5 | 286 | 7 | 321 | 7.32e-89 | 267 |
| MS.gene87056.t1 | MTR_5g074860 | 46.688 | 317 | 129 | 6 | 8 | 285 | 9 | 324 | 1.94e-88 | 266 |
| MS.gene87056.t1 | MTR_4g122640 | 46.488 | 299 | 128 | 3 | 20 | 286 | 38 | 336 | 2.78e-83 | 254 |
| MS.gene87056.t1 | MTR_8g076820 | 43.312 | 314 | 143 | 4 | 7 | 286 | 18 | 330 | 5.79e-83 | 253 |
| MS.gene87056.t1 | MTR_2g029750 | 42.462 | 325 | 144 | 4 | 5 | 286 | 6 | 330 | 1.27e-81 | 250 |
| MS.gene87056.t1 | MTR_5g021060 | 43.189 | 301 | 137 | 3 | 20 | 286 | 30 | 330 | 9.74e-81 | 247 |
| MS.gene87056.t1 | MTR_2g029860 | 43.533 | 317 | 141 | 5 | 8 | 286 | 14 | 330 | 6.87e-80 | 246 |
| MS.gene87056.t1 | MTR_4g074980 | 45.130 | 308 | 116 | 7 | 8 | 286 | 11 | 294 | 8.89e-80 | 243 |
| MS.gene87056.t1 | MTR_2g040000 | 43.689 | 309 | 134 | 4 | 16 | 286 | 25 | 331 | 1.18e-79 | 244 |
| MS.gene87056.t1 | MTR_5g014100 | 49.027 | 257 | 118 | 2 | 43 | 286 | 75 | 331 | 2.41e-79 | 243 |
| MS.gene87056.t1 | MTR_1g022970 | 41.830 | 306 | 143 | 4 | 16 | 286 | 42 | 347 | 4.09e-79 | 243 |
| MS.gene87056.t1 | MTR_4g125940 | 43.182 | 308 | 136 | 4 | 16 | 286 | 24 | 329 | 7.82e-79 | 242 |
| MS.gene87056.t1 | MTR_2g029850 | 41.875 | 320 | 143 | 4 | 10 | 286 | 11 | 330 | 1.60e-77 | 239 |
| MS.gene87056.t1 | MTR_5g049280 | 40.523 | 306 | 144 | 5 | 19 | 286 | 32 | 337 | 2.26e-77 | 239 |
| MS.gene87056.t1 | MTR_2g029800 | 41.562 | 320 | 144 | 4 | 10 | 286 | 11 | 330 | 3.06e-77 | 239 |
| MS.gene87056.t1 | MTR_2g029815 | 40.741 | 324 | 149 | 5 | 6 | 286 | 7 | 330 | 4.25e-77 | 238 |
| MS.gene87056.t1 | MTR_5g017860 | 43.302 | 321 | 144 | 5 | 3 | 286 | 7 | 326 | 4.51e-77 | 238 |
| MS.gene87056.t1 | MTR_2g029830 | 43.750 | 304 | 136 | 5 | 18 | 286 | 26 | 329 | 1.04e-76 | 238 |
| MS.gene87056.t1 | MTR_7g093370 | 39.812 | 319 | 156 | 4 | 4 | 286 | 53 | 371 | 1.06e-76 | 238 |
| MS.gene87056.t1 | MTR_2g029560 | 42.763 | 304 | 139 | 3 | 18 | 286 | 22 | 325 | 5.14e-76 | 235 |
| MS.gene87056.t1 | MTR_2g028980 | 41.104 | 326 | 147 | 5 | 5 | 286 | 6 | 330 | 7.91e-76 | 235 |
| MS.gene87056.t1 | MTR_1g054205 | 40.187 | 321 | 154 | 5 | 2 | 286 | 8 | 326 | 3.14e-75 | 233 |
| MS.gene87056.t1 | MTR_5g017850 | 42.368 | 321 | 147 | 5 | 3 | 286 | 7 | 326 | 3.79e-75 | 233 |
| MS.gene87056.t1 | MTR_2g029740 | 39.877 | 326 | 154 | 5 | 3 | 286 | 5 | 330 | 1.28e-74 | 232 |
| MS.gene87056.t1 | MTR_2g029730 | 42.434 | 304 | 140 | 3 | 18 | 286 | 23 | 326 | 2.81e-74 | 231 |
| MS.gene87056.t1 | MTR_4g074980 | 50.206 | 243 | 89 | 4 | 8 | 218 | 11 | 253 | 2.86e-74 | 228 |
| MS.gene87056.t1 | MTR_2g029830 | 46.640 | 253 | 126 | 2 | 43 | 286 | 9 | 261 | 5.87e-74 | 228 |
| MS.gene87056.t1 | MTR_4g125940 | 48.221 | 253 | 118 | 3 | 45 | 286 | 24 | 274 | 4.41e-73 | 226 |
| MS.gene87056.t1 | MTR_2g029820 | 39.815 | 324 | 152 | 4 | 6 | 286 | 7 | 330 | 4.52e-73 | 228 |
| MS.gene87056.t1 | MTR_7g072490 | 55.111 | 225 | 47 | 2 | 43 | 267 | 5 | 175 | 4.21e-72 | 221 |
| MS.gene87056.t1 | MTR_2g029910 | 40.498 | 321 | 147 | 5 | 10 | 286 | 12 | 332 | 4.40e-71 | 223 |
| MS.gene87056.t1 | MTR_5g074700 | 51.121 | 223 | 93 | 5 | 67 | 286 | 5 | 214 | 1.37e-69 | 214 |
| MS.gene87056.t1 | MTR_3g092990 | 39.542 | 306 | 162 | 3 | 4 | 286 | 10 | 315 | 1.87e-66 | 210 |
| MS.gene87056.t1 | MTR_4g031140 | 39.672 | 305 | 148 | 4 | 15 | 286 | 23 | 324 | 9.81e-66 | 209 |
| MS.gene87056.t1 | MTR_0155s0040 | 38.816 | 304 | 153 | 7 | 11 | 286 | 17 | 315 | 3.44e-65 | 207 |
| MS.gene87056.t1 | MTR_4g030890 | 40.264 | 303 | 145 | 4 | 17 | 286 | 97 | 396 | 5.19e-65 | 209 |
| MS.gene87056.t1 | MTR_3g092990 | 38.170 | 317 | 162 | 3 | 4 | 286 | 10 | 326 | 1.15e-64 | 206 |
| MS.gene87056.t1 | MTR_2g008730 | 43.841 | 276 | 137 | 7 | 24 | 286 | 31 | 301 | 4.32e-63 | 201 |
| MS.gene87056.t1 | MTR_5g074860 | 38.801 | 317 | 115 | 7 | 8 | 285 | 9 | 285 | 3.61e-62 | 198 |
| MS.gene87056.t1 | MTR_1g077000 | 38.585 | 311 | 158 | 7 | 4 | 286 | 22 | 327 | 1.56e-61 | 197 |
| MS.gene87056.t1 | MTR_4g046713 | 35.849 | 318 | 169 | 5 | 3 | 286 | 10 | 326 | 3.80e-60 | 194 |
| MS.gene87056.t1 | MTR_1g086320 | 37.662 | 308 | 153 | 5 | 17 | 286 | 27 | 333 | 5.02e-60 | 194 |
| MS.gene87056.t1 | MTR_2g008710 | 44.856 | 243 | 119 | 5 | 56 | 286 | 86 | 325 | 8.12e-60 | 193 |
| MS.gene87056.t1 | MTR_3g072210 | 52.973 | 185 | 85 | 2 | 104 | 286 | 54 | 238 | 1.10e-59 | 190 |
| MS.gene87056.t1 | MTR_1g086490 | 36.943 | 314 | 154 | 4 | 17 | 286 | 27 | 340 | 9.52e-59 | 191 |
| MS.gene87056.t1 | MTR_1g038680 | 38.000 | 300 | 149 | 5 | 24 | 286 | 33 | 332 | 7.57e-58 | 188 |
| MS.gene87056.t1 | MTR_7g029030 | 37.037 | 297 | 158 | 5 | 19 | 286 | 24 | 320 | 7.88e-58 | 188 |
| MS.gene87056.t1 | MTR_2g088770 | 35.556 | 315 | 165 | 7 | 8 | 286 | 13 | 325 | 1.07e-57 | 188 |
| MS.gene87056.t1 | MTR_4g133800 | 38.000 | 300 | 144 | 8 | 21 | 286 | 42 | 333 | 4.63e-57 | 186 |
| MS.gene87056.t1 | MTR_1g101830 | 36.278 | 317 | 161 | 7 | 5 | 286 | 12 | 322 | 3.58e-56 | 184 |
| MS.gene87056.t1 | MTR_7g107520 | 36.422 | 313 | 161 | 7 | 8 | 286 | 12 | 320 | 9.32e-56 | 182 |
| MS.gene87056.t1 | MTR_7g086820 | 40.562 | 249 | 138 | 4 | 43 | 286 | 69 | 312 | 3.87e-55 | 181 |
| MS.gene87056.t1 | MTR_8g075100 | 35.333 | 300 | 155 | 5 | 20 | 286 | 26 | 319 | 3.81e-54 | 178 |
| MS.gene87056.t1 | MTR_5g016010 | 34.426 | 305 | 164 | 4 | 17 | 285 | 24 | 328 | 5.21e-54 | 178 |
| MS.gene87056.t1 | MTR_7g086870 | 34.694 | 294 | 161 | 5 | 20 | 286 | 22 | 311 | 8.47e-54 | 177 |
| MS.gene87056.t1 | MTR_6g027440 | 35.849 | 318 | 168 | 7 | 1 | 286 | 1 | 314 | 5.93e-53 | 175 |
| MS.gene87056.t1 | MTR_4g095450 | 34.615 | 312 | 172 | 5 | 6 | 285 | 12 | 323 | 6.45e-53 | 175 |
| MS.gene87056.t1 | MTR_6g043460 | 35.739 | 291 | 157 | 5 | 20 | 282 | 36 | 324 | 8.52e-53 | 176 |
| MS.gene87056.t1 | MTR_1g025980 | 34.177 | 316 | 168 | 7 | 4 | 285 | 8 | 317 | 1.10e-52 | 174 |
| MS.gene87056.t1 | MTR_4g087965 | 35.082 | 305 | 160 | 7 | 16 | 282 | 38 | 342 | 2.92e-52 | 174 |
| MS.gene87056.t1 | MTR_0286s0010 | 35.463 | 313 | 166 | 5 | 9 | 286 | 23 | 334 | 7.86e-52 | 173 |
| MS.gene87056.t1 | MTR_6g008075 | 35.463 | 313 | 166 | 5 | 9 | 286 | 23 | 334 | 7.86e-52 | 173 |
| MS.gene87056.t1 | MTR_2g437770 | 35.690 | 297 | 156 | 8 | 20 | 286 | 50 | 341 | 2.11e-51 | 172 |
| MS.gene87056.t1 | MTR_1g090760 | 34.641 | 306 | 164 | 4 | 17 | 286 | 25 | 330 | 3.33e-51 | 171 |
| MS.gene87056.t1 | MTR_5g022870 | 38.645 | 251 | 141 | 4 | 43 | 286 | 72 | 316 | 8.61e-51 | 169 |
| MS.gene87056.t1 | MTR_4g114210 | 33.951 | 324 | 171 | 6 | 1 | 286 | 2 | 320 | 1.47e-50 | 169 |
| MS.gene87056.t1 | MTR_8g062780 | 33.121 | 314 | 175 | 4 | 8 | 286 | 11 | 324 | 4.78e-50 | 168 |
| MS.gene87056.t1 | MTR_1g066380 | 30.667 | 300 | 176 | 4 | 18 | 286 | 25 | 323 | 1.99e-49 | 166 |
| MS.gene87056.t1 | MTR_6g043280 | 35.017 | 297 | 158 | 7 | 20 | 286 | 41 | 332 | 2.06e-49 | 167 |
| MS.gene87056.t1 | MTR_1g066710 | 30.897 | 301 | 176 | 5 | 17 | 286 | 24 | 323 | 2.41e-49 | 166 |
| MS.gene87056.t1 | MTR_4g127670 | 39.732 | 224 | 126 | 2 | 68 | 282 | 96 | 319 | 7.12e-49 | 165 |
| MS.gene87056.t1 | MTR_1g009750 | 33.876 | 307 | 164 | 5 | 17 | 286 | 24 | 328 | 2.45e-48 | 164 |
| MS.gene87056.t1 | MTR_4g132490 | 32.911 | 316 | 177 | 5 | 4 | 286 | 14 | 327 | 4.68e-48 | 163 |
| MS.gene87056.t1 | MTR_2g008160 | 34.641 | 306 | 161 | 6 | 17 | 286 | 21 | 323 | 2.57e-47 | 161 |
| MS.gene87056.t1 | MTR_1g066380 | 33.735 | 249 | 159 | 3 | 43 | 286 | 8 | 255 | 5.45e-47 | 158 |
| MS.gene87056.t1 | MTR_0147s0010 | 34.304 | 309 | 150 | 7 | 20 | 282 | 77 | 378 | 1.07e-46 | 160 |
| MS.gene87056.t1 | MTR_1g066640 | 30.233 | 301 | 178 | 4 | 17 | 286 | 24 | 323 | 1.07e-46 | 159 |
| MS.gene87056.t1 | MTR_2g099175 | 30.267 | 337 | 179 | 8 | 1 | 286 | 4 | 335 | 2.05e-46 | 159 |
| MS.gene87056.t1 | MTR_2g077990 | 35.484 | 279 | 140 | 6 | 43 | 282 | 125 | 402 | 8.65e-46 | 159 |
| MS.gene87056.t1 | MTR_2g067440 | 31.118 | 331 | 160 | 8 | 20 | 285 | 60 | 387 | 1.41e-45 | 158 |
| MS.gene87056.t1 | MTR_6g043240 | 32.881 | 295 | 165 | 6 | 20 | 286 | 42 | 331 | 2.88e-44 | 154 |
| MS.gene87056.t1 | MTR_2g078610 | 34.409 | 279 | 143 | 6 | 43 | 282 | 125 | 402 | 6.67e-44 | 154 |
| MS.gene87056.t1 | MTR_5g033470 | 34.505 | 313 | 163 | 8 | 14 | 286 | 67 | 377 | 3.48e-43 | 151 |
| MS.gene87056.t1 | MTR_1g066680 | 28.667 | 300 | 183 | 4 | 17 | 286 | 24 | 322 | 5.33e-43 | 149 |
| MS.gene87056.t1 | MTR_3g105790 | 31.529 | 314 | 184 | 3 | 4 | 286 | 9 | 322 | 1.51e-42 | 148 |
| MS.gene87056.t1 | MTR_2g067450 | 31.250 | 304 | 167 | 7 | 20 | 285 | 11 | 310 | 4.23e-42 | 147 |
| MS.gene87056.t1 | MTR_2g029880 | 41.451 | 193 | 88 | 5 | 106 | 286 | 9 | 188 | 5.25e-42 | 144 |
| MS.gene87056.t1 | MTR_4g132110 | 28.956 | 297 | 181 | 4 | 20 | 286 | 32 | 328 | 1.27e-39 | 141 |
| MS.gene87056.t1 | MTR_2g078280 | 34.572 | 269 | 136 | 6 | 43 | 272 | 125 | 392 | 1.58e-39 | 142 |
| MS.gene87056.t1 | MTR_3g105790 | 35.498 | 231 | 140 | 1 | 65 | 286 | 16 | 246 | 3.23e-39 | 137 |
| MS.gene87056.t1 | MTR_1g009750 | 31.438 | 299 | 165 | 5 | 17 | 286 | 24 | 311 | 1.34e-37 | 135 |
| MS.gene87056.t1 | MTR_4g132110 | 28.477 | 302 | 181 | 5 | 20 | 286 | 32 | 333 | 2.55e-37 | 135 |
| MS.gene87056.t1 | MTR_2g008160 | 31.333 | 300 | 144 | 6 | 17 | 286 | 21 | 288 | 4.11e-34 | 125 |
| MS.gene87056.t1 | MTR_2g078560 | 31.081 | 222 | 115 | 4 | 99 | 282 | 95 | 316 | 7.42e-29 | 112 |
| MS.gene87056.t1 | MTR_3g072260 | 46.364 | 110 | 33 | 1 | 19 | 102 | 25 | 134 | 2.86e-25 | 98.2 |
| MS.gene87056.t1 | MTR_2g008160 | 36.047 | 172 | 82 | 4 | 17 | 163 | 21 | 189 | 4.18e-24 | 97.1 |
| MS.gene87056.t1 | MTR_2g077980 | 29.348 | 276 | 149 | 9 | 56 | 286 | 11 | 285 | 7.05e-24 | 98.6 |
| MS.gene87056.t1 | MTR_3g462850 | 38.298 | 141 | 75 | 4 | 158 | 286 | 9 | 149 | 7.98e-23 | 92.0 |
| MS.gene87056.t1 | MTR_5g058120 | 35.065 | 154 | 96 | 2 | 129 | 282 | 6 | 155 | 4.88e-22 | 92.8 |
| MS.gene87056.t1 | MTR_4g031040 | 36.145 | 166 | 69 | 3 | 55 | 220 | 3 | 131 | 1.83e-21 | 88.2 |
| MS.gene87056.t1 | MTR_7g086790 | 41.525 | 118 | 65 | 2 | 43 | 160 | 19 | 132 | 2.89e-21 | 89.4 |
| MS.gene87056.t1 | MTR_5g074770 | 43.333 | 90 | 48 | 2 | 198 | 285 | 20 | 108 | 3.44e-20 | 84.0 |
| MS.gene87056.t1 | MTR_1g098320 | 44.872 | 78 | 43 | 0 | 209 | 286 | 47 | 124 | 3.45e-17 | 77.0 |
| MS.gene87056.t1 | MTR_7g107500 | 41.667 | 84 | 48 | 1 | 203 | 286 | 15 | 97 | 1.96e-14 | 68.2 |
| MS.gene87056.t1 | MTR_1g089005 | 55.000 | 60 | 26 | 1 | 46 | 105 | 73 | 131 | 5.58e-11 | 60.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87056.t1 | AT5G05340 | 55.068 | 296 | 105 | 2 | 15 | 282 | 25 | 320 | 9.86e-111 | 323 |
| MS.gene87056.t1 | AT5G58400 | 51.274 | 314 | 124 | 3 | 2 | 286 | 12 | 325 | 4.57e-105 | 309 |
| MS.gene87056.t1 | AT5G58390 | 47.785 | 316 | 135 | 4 | 1 | 286 | 1 | 316 | 4.64e-95 | 283 |
| MS.gene87056.t1 | AT1G14550 | 44.237 | 321 | 144 | 5 | 1 | 286 | 1 | 321 | 2.83e-91 | 273 |
| MS.gene87056.t1 | AT1G14540 | 43.871 | 310 | 146 | 3 | 5 | 286 | 6 | 315 | 1.25e-84 | 256 |
| MS.gene87056.t1 | AT5G06730 | 43.533 | 317 | 144 | 3 | 5 | 286 | 18 | 334 | 3.52e-83 | 254 |
| MS.gene87056.t1 | AT5G06720 | 43.849 | 317 | 143 | 4 | 5 | 286 | 17 | 333 | 6.80e-83 | 253 |
| MS.gene87056.t1 | AT1G44970 | 43.506 | 308 | 139 | 4 | 14 | 286 | 39 | 346 | 5.51e-82 | 251 |
| MS.gene87056.t1 | AT3G32980 | 44.444 | 315 | 138 | 5 | 9 | 286 | 20 | 334 | 9.87e-82 | 250 |
| MS.gene87056.t1 | AT3G49110 | 44.620 | 316 | 137 | 6 | 8 | 286 | 22 | 336 | 3.10e-81 | 249 |
| MS.gene87056.t1 | AT4G36430 | 41.139 | 316 | 151 | 4 | 5 | 286 | 16 | 330 | 3.27e-81 | 248 |
| MS.gene87056.t1 | AT2G38390 | 42.857 | 322 | 148 | 5 | 1 | 286 | 12 | 333 | 1.40e-80 | 247 |
| MS.gene87056.t1 | AT2G18150 | 42.088 | 297 | 138 | 3 | 24 | 286 | 40 | 336 | 9.60e-80 | 245 |
| MS.gene87056.t1 | AT4G08780 | 42.122 | 311 | 143 | 4 | 13 | 286 | 17 | 327 | 1.19e-79 | 245 |
| MS.gene87056.t1 | AT3G49120 | 41.875 | 320 | 149 | 4 | 4 | 286 | 16 | 335 | 2.37e-79 | 244 |
| MS.gene87056.t1 | AT4G08770 | 43.408 | 311 | 139 | 5 | 13 | 286 | 17 | 327 | 3.94e-79 | 243 |
| MS.gene87056.t1 | AT2G18140 | 43.854 | 301 | 135 | 4 | 20 | 286 | 35 | 335 | 5.16e-79 | 243 |
| MS.gene87056.t1 | AT1G68850 | 40.850 | 306 | 142 | 5 | 20 | 286 | 30 | 335 | 6.07e-78 | 240 |
| MS.gene87056.t1 | AT3G50990 | 40.000 | 320 | 154 | 4 | 5 | 286 | 22 | 341 | 4.55e-77 | 238 |
| MS.gene87056.t1 | AT5G66390 | 46.825 | 252 | 126 | 2 | 43 | 286 | 82 | 333 | 5.97e-77 | 238 |
| MS.gene87056.t1 | AT2G38380 | 44.771 | 306 | 133 | 5 | 17 | 286 | 28 | 333 | 1.20e-76 | 237 |
| MS.gene87056.t1 | AT4G16270 | 51.575 | 254 | 109 | 4 | 43 | 286 | 99 | 348 | 3.03e-76 | 236 |
| MS.gene87056.t1 | AT2G35380 | 42.810 | 306 | 136 | 4 | 20 | 286 | 30 | 335 | 3.18e-75 | 233 |
| MS.gene87056.t1 | AT5G19890 | 42.857 | 308 | 133 | 6 | 16 | 286 | 26 | 327 | 5.47e-75 | 232 |
| MS.gene87056.t1 | AT2G35380 | 48.361 | 244 | 113 | 3 | 56 | 286 | 4 | 247 | 9.55e-73 | 224 |
| MS.gene87056.t1 | AT2G22420 | 39.498 | 319 | 157 | 4 | 1 | 286 | 4 | 319 | 1.33e-71 | 224 |
| MS.gene87056.t1 | AT5G19880 | 42.105 | 323 | 144 | 8 | 4 | 286 | 10 | 329 | 1.34e-68 | 216 |
| MS.gene87056.t1 | AT1G49570 | 39.604 | 303 | 147 | 4 | 16 | 282 | 44 | 346 | 3.33e-65 | 208 |
| MS.gene87056.t1 | AT3G03670 | 38.413 | 315 | 160 | 3 | 5 | 286 | 8 | 321 | 2.67e-63 | 202 |
| MS.gene87056.t1 | AT5G15180 | 35.826 | 321 | 165 | 7 | 4 | 286 | 12 | 329 | 1.14e-61 | 198 |
| MS.gene87056.t1 | AT4G33420 | 37.580 | 314 | 159 | 7 | 5 | 286 | 17 | 325 | 4.17e-61 | 196 |
| MS.gene87056.t1 | AT4G33420 | 37.580 | 314 | 159 | 7 | 5 | 286 | 64 | 372 | 1.49e-60 | 196 |
| MS.gene87056.t1 | AT3G01190 | 38.658 | 313 | 153 | 7 | 8 | 286 | 14 | 321 | 2.80e-60 | 194 |
| MS.gene87056.t1 | AT5G14130 | 34.675 | 323 | 165 | 6 | 7 | 286 | 11 | 330 | 5.45e-60 | 194 |
| MS.gene87056.t1 | AT5G40150 | 39.000 | 300 | 151 | 5 | 18 | 286 | 30 | 328 | 6.27e-60 | 194 |
| MS.gene87056.t1 | AT5G17820 | 37.188 | 320 | 155 | 8 | 2 | 286 | 5 | 313 | 9.47e-60 | 192 |
| MS.gene87056.t1 | AT5G14130 | 34.675 | 323 | 165 | 6 | 7 | 286 | 52 | 371 | 1.17e-59 | 194 |
| MS.gene87056.t1 | AT5G17820 | 37.188 | 320 | 155 | 8 | 2 | 286 | 58 | 366 | 8.20e-59 | 192 |
| MS.gene87056.t1 | AT3G28200 | 39.130 | 299 | 151 | 5 | 18 | 286 | 19 | 316 | 3.60e-58 | 189 |
| MS.gene87056.t1 | AT5G39580 | 37.700 | 313 | 163 | 6 | 4 | 286 | 9 | 319 | 4.49e-58 | 189 |
| MS.gene87056.t1 | AT5G64120 | 38.014 | 292 | 150 | 5 | 24 | 286 | 39 | 328 | 4.94e-58 | 189 |
| MS.gene87056.t1 | AT5G67400 | 35.669 | 314 | 166 | 4 | 9 | 286 | 16 | 329 | 8.04e-57 | 186 |
| MS.gene87056.t1 | AT4G11290 | 34.783 | 322 | 173 | 5 | 1 | 286 | 6 | 326 | 8.17e-57 | 186 |
| MS.gene87056.t1 | AT1G05260 | 35.783 | 313 | 164 | 6 | 9 | 286 | 15 | 325 | 1.23e-56 | 185 |
| MS.gene87056.t1 | AT3G49960 | 35.494 | 324 | 168 | 5 | 4 | 286 | 6 | 329 | 5.49e-56 | 183 |
| MS.gene87056.t1 | AT1G71695 | 37.584 | 298 | 153 | 6 | 20 | 286 | 44 | 339 | 1.50e-55 | 183 |
| MS.gene87056.t1 | AT5G51890 | 36.792 | 318 | 159 | 9 | 5 | 286 | 11 | 322 | 1.13e-54 | 180 |
| MS.gene87056.t1 | AT2G18980 | 34.375 | 320 | 168 | 5 | 4 | 286 | 9 | 323 | 1.39e-54 | 180 |
| MS.gene87056.t1 | AT1G34510 | 35.621 | 306 | 163 | 7 | 9 | 286 | 10 | 309 | 1.43e-54 | 179 |
| MS.gene87056.t1 | AT3G21770 | 36.093 | 302 | 156 | 6 | 18 | 284 | 27 | 326 | 1.72e-54 | 179 |
| MS.gene87056.t1 | AT4G37530 | 34.516 | 310 | 167 | 4 | 13 | 286 | 20 | 329 | 2.07e-54 | 179 |
| MS.gene87056.t1 | AT4G33870 | 33.033 | 333 | 154 | 5 | 18 | 282 | 66 | 397 | 2.15e-53 | 179 |
| MS.gene87056.t1 | AT5G47000 | 34.713 | 314 | 170 | 5 | 4 | 286 | 21 | 330 | 6.88e-53 | 176 |
| MS.gene87056.t1 | AT1G05240 | 38.224 | 259 | 146 | 5 | 38 | 286 | 71 | 325 | 4.49e-52 | 173 |
| MS.gene87056.t1 | AT1G05250 | 38.224 | 259 | 146 | 5 | 38 | 286 | 71 | 325 | 4.49e-52 | 173 |
| MS.gene87056.t1 | AT4G30170 | 35.526 | 304 | 162 | 6 | 16 | 286 | 23 | 325 | 6.06e-52 | 173 |
| MS.gene87056.t1 | AT4G17690 | 35.452 | 299 | 159 | 5 | 20 | 286 | 26 | 322 | 1.30e-51 | 172 |
| MS.gene87056.t1 | AT4G26010 | 35.179 | 307 | 165 | 8 | 8 | 286 | 9 | 309 | 1.85e-51 | 171 |
| MS.gene87056.t1 | AT1G24110 | 35.505 | 307 | 162 | 7 | 15 | 286 | 17 | 322 | 2.09e-51 | 172 |
| MS.gene87056.t1 | AT4G26010 | 35.179 | 307 | 165 | 8 | 8 | 286 | 37 | 337 | 2.66e-51 | 172 |
| MS.gene87056.t1 | AT2G34060 | 35.948 | 306 | 156 | 7 | 19 | 285 | 41 | 345 | 2.98e-51 | 172 |
| MS.gene87056.t1 | AT4G37520 | 34.098 | 305 | 165 | 4 | 18 | 286 | 25 | 329 | 4.52e-51 | 171 |
| MS.gene87056.t1 | AT2G41480 | 34.796 | 319 | 170 | 8 | 4 | 286 | 12 | 328 | 9.61e-51 | 170 |
| MS.gene87056.t1 | AT5G42180 | 34.615 | 312 | 165 | 6 | 8 | 285 | 10 | 316 | 2.91e-50 | 168 |
| MS.gene87056.t1 | AT1G77100 | 35.093 | 322 | 170 | 11 | 1 | 286 | 1 | 319 | 2.22e-49 | 166 |
| MS.gene87056.t1 | AT4G37520 | 33.770 | 305 | 163 | 5 | 18 | 286 | 25 | 326 | 2.95e-49 | 166 |
| MS.gene87056.t1 | AT5G64110 | 40.467 | 257 | 134 | 6 | 41 | 286 | 82 | 330 | 2.78e-48 | 164 |
| MS.gene87056.t1 | AT4G25980 | 30.625 | 320 | 184 | 7 | 3 | 286 | 9 | 326 | 7.73e-47 | 160 |
| MS.gene87056.t1 | AT4G31760 | 34.194 | 310 | 155 | 7 | 17 | 286 | 26 | 326 | 1.37e-46 | 159 |
| MS.gene87056.t1 | AT5G64100 | 38.281 | 256 | 139 | 6 | 41 | 286 | 85 | 331 | 1.42e-45 | 157 |
| MS.gene87056.t1 | AT1G30870 | 34.448 | 299 | 152 | 8 | 20 | 282 | 51 | 341 | 1.70e-45 | 157 |
| MS.gene87056.t1 | AT5G24070 | 36.626 | 243 | 139 | 4 | 56 | 286 | 96 | 335 | 4.07e-44 | 153 |
| MS.gene87056.t1 | AT4G37530 | 35.135 | 259 | 132 | 4 | 13 | 235 | 20 | 278 | 5.02e-44 | 151 |
| MS.gene87056.t1 | AT2G37130 | 29.431 | 299 | 180 | 4 | 19 | 286 | 29 | 327 | 6.59e-44 | 152 |
| MS.gene87056.t1 | AT2G24800 | 34.727 | 311 | 151 | 9 | 18 | 286 | 29 | 329 | 1.35e-43 | 151 |
| MS.gene87056.t1 | AT2G37130 | 29.492 | 295 | 177 | 4 | 23 | 286 | 2 | 296 | 2.80e-43 | 150 |
| MS.gene87056.t1 | AT2G43480 | 36.328 | 256 | 145 | 6 | 43 | 286 | 86 | 335 | 3.62e-43 | 150 |
| MS.gene87056.t1 | AT4G21960 | 30.201 | 298 | 176 | 5 | 20 | 286 | 31 | 327 | 3.02e-42 | 148 |
| MS.gene87056.t1 | AT2G39040 | 33.227 | 313 | 167 | 9 | 14 | 286 | 40 | 350 | 9.20e-42 | 147 |
| MS.gene87056.t1 | AT3G17070 | 31.667 | 300 | 166 | 7 | 20 | 282 | 38 | 335 | 1.13e-38 | 139 |
| MS.gene87056.t1 | AT5G22410 | 32.013 | 303 | 161 | 10 | 19 | 283 | 27 | 322 | 2.03e-37 | 135 |
| MS.gene87056.t1 | AT3G17070 | 34.802 | 227 | 137 | 4 | 66 | 282 | 47 | 272 | 7.55e-37 | 132 |
| MS.gene87056.t1 | AT5G39580 | 32.710 | 214 | 115 | 5 | 4 | 194 | 9 | 216 | 3.14e-24 | 98.2 |
| MS.gene87056.t1 | AT4G25980 | 30.055 | 183 | 102 | 4 | 3 | 161 | 54 | 234 | 8.29e-22 | 92.8 |
| MS.gene87056.t1 | AT2G24800 | 35.135 | 185 | 84 | 7 | 18 | 172 | 29 | 207 | 1.67e-18 | 82.8 |
| MS.gene87056.t1 | AT3G42570 | 40.000 | 95 | 56 | 1 | 66 | 159 | 53 | 147 | 3.01e-16 | 74.7 |
| MS.gene87056.t1 | AT4G32320 | 29.218 | 243 | 111 | 7 | 41 | 267 | 124 | 321 | 7.81e-15 | 73.9 |
Find 61 sgRNAs with CRISPR-Local
Find 119 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCCTCTAGTGCAGTCTTTA+TGG | 0.118664 | 7.4:+32099293 | None:intergenic |
| TGCTAATGCAATGGTCAAAA+TGG | 0.164196 | 7.4:-32098203 | MS.gene87056:CDS |
| CCAACAAAGCATAAGATTAT+TGG | 0.222126 | 7.4:+32100640 | None:intergenic |
| TGATAAAGCAACCATTTCTT+TGG | 0.230750 | 7.4:+32098833 | None:intergenic |
| AAAGAAATGGTTGCTTTATC+AGG | 0.238869 | 7.4:-32098831 | MS.gene87056:intron |
| CCAATAATCTTATGCTTTGT+TGG | 0.288120 | 7.4:-32100640 | MS.gene87056:CDS |
| TAGACCCAGTGATAGGATTA+AGG | 0.304083 | 7.4:+32098176 | None:intergenic |
| CACAGGTGGTGATGACAATT+TGG | 0.308173 | 7.4:-32098392 | MS.gene87056:CDS |
| CAATAATCTTATGCTTTGTT+GGG | 0.317431 | 7.4:-32100639 | MS.gene87056:CDS |
| TCAGCGCATGAGACAGTTCT+AGG | 0.328783 | 7.4:+32099264 | None:intergenic |
| GTTGTAGATTCTTCAGAAAC+AGG | 0.342220 | 7.4:-32098477 | MS.gene87056:CDS |
| TTAATAGTTGTAAGAACATC+AGG | 0.351592 | 7.4:+32100571 | None:intergenic |
| GCTAATGCAATGGTCAAAAT+GGG | 0.387898 | 7.4:-32098202 | MS.gene87056:CDS |
| AATCCTATCACTGGGTCTAA+TGG | 0.392259 | 7.4:-32098172 | MS.gene87056:CDS |
| TATGAATTGTCAAATGTGTT+TGG | 0.396769 | 7.4:+32098349 | None:intergenic |
| GATAAAGCAACCATTTCTTT+GGG | 0.396969 | 7.4:+32098834 | None:intergenic |
| ACCTAGTTGGACAGTGCAAT+TGG | 0.399408 | 7.4:-32098967 | MS.gene87056:CDS |
| CAGAAGAAAAGAGACCCTTT+TGG | 0.403351 | 7.4:+32098308 | None:intergenic |
| GTGCAAATGCTAATTCCTTA+AGG | 0.406214 | 7.4:-32099335 | MS.gene87056:CDS |
| TGCAAATGCTAATTCCTTAA+GGG | 0.406703 | 7.4:-32099334 | MS.gene87056:CDS |
| AATTACATCAAAACCCCTTA+AGG | 0.410114 | 7.4:+32099320 | None:intergenic |
| CCATAACTTGCAAAGCCAAA+AGG | 0.423754 | 7.4:-32098323 | MS.gene87056:CDS |
| AGGTTTCACACCCAAAGAAA+TGG | 0.428767 | 7.4:-32098844 | MS.gene87056:CDS |
| GGGAACCTTAATCCTATCAC+TGG | 0.466601 | 7.4:-32098181 | MS.gene87056:CDS |
| TGACCATTAGACCCAGTGAT+AGG | 0.476760 | 7.4:+32098169 | None:intergenic |
| CTGGGTCTAATGGTCAGATT+AGG | 0.485376 | 7.4:-32098162 | MS.gene87056:CDS |
| GTCAGATTAGGACCAACTGC+AGG | 0.488668 | 7.4:-32098150 | MS.gene87056:CDS |
| TTCAGCTAGGTGGACCTAGT+TGG | 0.491072 | 7.4:-32098980 | MS.gene87056:intron |
| TATCCTCTCTGTTGCGGCAA+GGG | 0.495055 | 7.4:-32099241 | MS.gene87056:CDS |
| AACACAGATTTACCTGGTCC+TGG | 0.495820 | 7.4:-32098906 | MS.gene87056:CDS |
| GGTCCTGGTTCAAATCTAGA+TGG | 0.497489 | 7.4:-32098891 | MS.gene87056:CDS |
| CCTAGTTGGACAGTGCAATT+GGG | 0.503746 | 7.4:-32098966 | MS.gene87056:CDS |
| GACGATACATCAAGTTTCAC+AGG | 0.508359 | 7.4:-32099372 | MS.gene87056:CDS |
| CATAACTTGCAAAGCCAAAA+GGG | 0.509419 | 7.4:-32098322 | MS.gene87056:CDS |
| CCCAATTGCACTGTCCAACT+AGG | 0.517479 | 7.4:+32098966 | None:intergenic |
| GGACAGTGCAATTGGGCAGA+AGG | 0.526639 | 7.4:-32098959 | MS.gene87056:CDS |
| ATATCCTCTCTGTTGCGGCA+AGG | 0.537143 | 7.4:-32099242 | MS.gene87056:CDS |
| GCAAATGCTAATTCCTTAAG+GGG | 0.556424 | 7.4:-32099333 | MS.gene87056:CDS |
| TCTAGATTTGAACCAGGACC+AGG | 0.557996 | 7.4:+32098894 | None:intergenic |
| CGCTGATATCCTCTCTGTTG+CGG | 0.560284 | 7.4:-32099247 | MS.gene87056:CDS |
| TCAATTGATTACCCTGCAGT+TGG | 0.561042 | 7.4:+32098138 | None:intergenic |
| CACCATAAAGACTGCACTAG+AGG | 0.566881 | 7.4:-32099295 | MS.gene87056:CDS |
| TTCATCAACATCTGAGTCTG+TGG | 0.573305 | 7.4:+32098261 | None:intergenic |
| AATAATCTTATGCTTTGTTG+GGG | 0.576567 | 7.4:-32100638 | MS.gene87056:CDS |
| GACAGTGCAATTGGGCAGAA+GGG | 0.583814 | 7.4:-32098958 | MS.gene87056:CDS |
| AGAGAAATAGATTCTGCTGT+GGG | 0.585412 | 7.4:-32100547 | MS.gene87056:intron |
| TAATAATAATTTCAGCTAGG+TGG | 0.600170 | 7.4:-32098990 | MS.gene87056:intron |
| CAAGCAAATTGTCCTACCAC+AGG | 0.606022 | 7.4:-32098409 | MS.gene87056:CDS |
| TTAGCTAACACAGATTTACC+TGG | 0.610114 | 7.4:-32098912 | MS.gene87056:CDS |
| CAAATTGTCATCACCACCTG+TGG | 0.610605 | 7.4:+32098393 | None:intergenic |
| CAGCGCATGAGACAGTTCTA+GGG | 0.613294 | 7.4:+32099265 | None:intergenic |
| GAGAGAAATAGATTCTGCTG+TGG | 0.635209 | 7.4:-32100548 | MS.gene87056:CDS |
| TTGTCATCACCACCTGTGGT+AGG | 0.645092 | 7.4:+32098397 | None:intergenic |
| GCAAATTGTCCTACCACAGG+TGG | 0.657034 | 7.4:-32098406 | MS.gene87056:CDS |
| TAATAGTTGTAAGAACATCA+GGG | 0.660202 | 7.4:+32100572 | None:intergenic |
| TCAGATTAGGACCAACTGCA+GGG | 0.665548 | 7.4:-32098149 | MS.gene87056:CDS |
| GGAACCTTAATCCTATCACT+GGG | 0.670002 | 7.4:-32098180 | MS.gene87056:CDS |
| CTAATGCAATGGTCAAAATG+GGG | 0.675770 | 7.4:-32098201 | MS.gene87056:CDS |
| AGTCCCTTGCCGCAACAGAG+AGG | 0.682879 | 7.4:+32099238 | None:intergenic |
| TTTGGAGTAGTAGTGTCAAG+TGG | 0.685448 | 7.4:+32098367 | None:intergenic |
| AGACCATCTAGATTTGAACC+AGG | 0.691335 | 7.4:+32098888 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAAAATTATAATAATGAATT+AGG | + | chr7.4:32099212-32099231 | None:intergenic | 10.0% |
| !!! | AATAACAATTTTTTTTTGAA+AGG | + | chr7.4:32098807-32098826 | None:intergenic | 10.0% |
| !!! | CATGTATTTTATAAAATTTA+TGG | + | chr7.4:32098473-32098492 | None:intergenic | 10.0% |
| !!! | TCATTATTATAATTTTGTAA+AGG | - | chr7.4:32099215-32099234 | MS.gene87056:intron | 10.0% |
| !! | AAATAATAATAATTTCAGCT+AGG | - | chr7.4:32099803-32099822 | MS.gene87056:intron | 15.0% |
| !! | GTCAAATATTCTATAAAAAA+AGG | + | chr7.4:32099066-32099085 | None:intergenic | 15.0% |
| !! | TAAACAATGATTGTAAAATT+AGG | + | chr7.4:32098960-32098979 | None:intergenic | 15.0% |
| !!! | ATACTTGCAAAAAATATTTT+AGG | - | chr7.4:32100273-32100292 | MS.gene87056:intron | 15.0% |
| !!! | TTTTTATAGAATATTTGACT+TGG | - | chr7.4:32099067-32099086 | MS.gene87056:intron | 15.0% |
| !!! | TTTTTTCAACAAAATCATTT+TGG | - | chr7.4:32099351-32099370 | MS.gene87056:CDS | 15.0% |
| !! | ATTGCTTATTTATCTTGTAA+AGG | - | chr7.4:32099115-32099134 | MS.gene87056:intron | 20.0% |
| !! | TAATTTGATCATCTTCATAA+AGG | - | chr7.4:32098545-32098564 | MS.gene87056:intron | 20.0% |
| !! | TGAATTAGGAAATGTTAAAA+AGG | + | chr7.4:32099198-32099217 | None:intergenic | 20.0% |
| !! | TTCAGTAAAATATTATTGAG+CGG | - | chr7.4:32098493-32098512 | MS.gene87056:CDS | 20.0% |
| !!! | AATCTTGTGTTTTGAATATA+GGG | - | chr7.4:32099379-32099398 | MS.gene87056:CDS | 20.0% |
| !!! | AGCAATTAATTAATTTGCAT+TGG | - | chr7.4:32099757-32099776 | MS.gene87056:intron | 20.0% |
| !!! | ATATCTTCTTTTGATAACAA+AGG | - | chr7.4:32099932-32099951 | MS.gene87056:intron | 20.0% |
| !!! | TAATCTTGTGTTTTGAATAT+AGG | - | chr7.4:32099378-32099397 | MS.gene87056:CDS | 20.0% |
| !!! | TATTATCTTTCTTTTTTGAC+AGG | + | chr7.4:32099013-32099032 | None:intergenic | 20.0% |
| ! | AATTAAAAAATCGTGTGTAG+AGG | + | chr7.4:32098769-32098788 | None:intergenic | 25.0% |
| ! | ATTAAAAAATCGTGTGTAGA+GGG | + | chr7.4:32098768-32098787 | None:intergenic | 25.0% |
| ! | ATTAAAAATTGAACAACTGC+AGG | - | chr7.4:32098705-32098724 | MS.gene87056:intron | 25.0% |
| ! | CATGCTTGAGTATATATAAT+AGG | + | chr7.4:32098377-32098396 | None:intergenic | 25.0% |
| ! | CTATTACTTTAGTCTATTAG+CGG | + | chr7.4:32098597-32098616 | None:intergenic | 25.0% |
| ! | TAAGAAAACATGCGTATAAT+TGG | + | chr7.4:32099246-32099265 | None:intergenic | 25.0% |
| ! | TAATAATAATTTCAGCTAGG+TGG | - | chr7.4:32099806-32099825 | MS.gene87056:intron | 25.0% |
| ! | TAATAGTTGTAAGAACATCA+GGG | + | chr7.4:32098227-32098246 | None:intergenic | 25.0% |
| ! | TATGAATTGTCAAATGTGTT+TGG | + | chr7.4:32100450-32100469 | None:intergenic | 25.0% |
| ! | TGAAGATGATCAAATTACAT+CGG | + | chr7.4:32098542-32098561 | None:intergenic | 25.0% |
| ! | TTAATAGTTGTAAGAACATC+AGG | + | chr7.4:32098228-32098247 | None:intergenic | 25.0% |
| ! | TTATTTATCTTGTAAAGGCA+TGG | - | chr7.4:32099120-32099139 | MS.gene87056:intron | 25.0% |
| !! | AATAATCTTATGCTTTGTTG+GGG | - | chr7.4:32098158-32098177 | MS.gene87056:CDS | 25.0% |
| !! | ATTATAATTTTGTAAAGGCG+TGG | - | chr7.4:32099220-32099239 | MS.gene87056:intron | 25.0% |
| !! | CAATAATCTTATGCTTTGTT+GGG | - | chr7.4:32098157-32098176 | MS.gene87056:CDS | 25.0% |
| !!! | AATGTTCTGTTTTTAATCCA+AGG | + | chr7.4:32099284-32099303 | None:intergenic | 25.0% |
| !!! | AGAGATAAATGTTGATAGTT+GGG | + | chr7.4:32098654-32098673 | None:intergenic | 25.0% |
| !!! | GCGATAAGTTTTAAAAAACT+CGG | + | chr7.4:32100185-32100204 | None:intergenic | 25.0% |
| !!! | GTAAAATTAGGAGCATTTTT+TGG | + | chr7.4:32098948-32098967 | None:intergenic | 25.0% |
| AATAACTGATGATAGACATG+AGG | + | chr7.4:32100227-32100246 | None:intergenic | 30.0% | |
| AATTACATCAAAACCCCTTA+AGG | + | chr7.4:32099479-32099498 | None:intergenic | 30.0% | |
| CCAACAAAGCATAAGATTAT+TGG | + | chr7.4:32098159-32098178 | None:intergenic | 30.0% | |
| CCAATAATCTTATGCTTTGT+TGG | - | chr7.4:32098156-32098175 | MS.gene87056:CDS | 30.0% | |
| CTAATTCAATAGCATCATGT+TGG | - | chr7.4:32098622-32098641 | MS.gene87056:intron | 30.0% | |
| GATAAAGCAACCATTTCTTT+GGG | + | chr7.4:32099965-32099984 | None:intergenic | 30.0% | |
| TACAAAATGTAACTTCACAG+TGG | - | chr7.4:32099659-32099678 | MS.gene87056:intron | 30.0% | |
| TAGAAGAACATTTCTTTCCT+TGG | - | chr7.4:32099264-32099283 | MS.gene87056:CDS | 30.0% | |
| TGATAAAGCAACCATTTCTT+TGG | + | chr7.4:32099966-32099985 | None:intergenic | 30.0% | |
| TGCAAATGCTAATTCCTTAA+GGG | - | chr7.4:32099462-32099481 | MS.gene87056:intron | 30.0% | |
| TTGCTTGAACAAAACAATCA+TGG | + | chr7.4:32098317-32098336 | None:intergenic | 30.0% | |
| ! | AAAGAAATGGTTGCTTTATC+AGG | - | chr7.4:32099965-32099984 | MS.gene87056:intron | 30.0% |
| ! | AGTTCACAAAAATTGACTTC+AGG | + | chr7.4:32100070-32100089 | None:intergenic | 30.0% |
| ! | ATTGATTCTCTCAGATTAGT+CGG | - | chr7.4:32100144-32100163 | MS.gene87056:intron | 30.0% |
| !! | AACTGATTTTGCTAATGCAA+TGG | - | chr7.4:32100584-32100603 | MS.gene87056:CDS | 30.0% |
| !! | GAGAGATAAATGTTGATAGT+TGG | + | chr7.4:32098655-32098674 | None:intergenic | 30.0% |
| !!! | ATTTTAGGATCTCACACAAT+TGG | - | chr7.4:32100288-32100307 | MS.gene87056:intron | 30.0% |
| AGAGAAATAGATTCTGCTGT+GGG | - | chr7.4:32098249-32098268 | MS.gene87056:CDS | 35.0% | |
| AGGATGAGACTGAAAAGTTA+AGG | + | chr7.4:32100207-32100226 | None:intergenic | 35.0% | |
| CGTTGTTGAGTAAAAATCAG+TGG | + | chr7.4:32098202-32098221 | None:intergenic | 35.0% | |
| CTAATGCAATGGTCAAAATG+GGG | - | chr7.4:32100595-32100614 | MS.gene87056:CDS | 35.0% | |
| GCAAATGCTAATTCCTTAAG+GGG | - | chr7.4:32099463-32099482 | MS.gene87056:intron | 35.0% | |
| GCTAATGCAATGGTCAAAAT+GGG | - | chr7.4:32100594-32100613 | MS.gene87056:CDS | 35.0% | |
| GTGCAAATGCTAATTCCTTA+AGG | - | chr7.4:32099461-32099480 | MS.gene87056:intron | 35.0% | |
| GTTGTAGATTCTTCAGAAAC+AGG | - | chr7.4:32100319-32100338 | MS.gene87056:intron | 35.0% | |
| TCAATCTCATCGTTCATTAG+CGG | + | chr7.4:32100129-32100148 | None:intergenic | 35.0% | |
| TGCTAATGCAATGGTCAAAA+TGG | - | chr7.4:32100593-32100612 | MS.gene87056:CDS | 35.0% | |
| TTAGCTAACACAGATTTACC+TGG | - | chr7.4:32099884-32099903 | MS.gene87056:intron | 35.0% | |
| ! | CATAACTTGCAAAGCCAAAA+GGG | - | chr7.4:32100474-32100493 | MS.gene87056:intron | 35.0% |
| ! | TCACAAAAATTGACTTCAGG+AGG | + | chr7.4:32100067-32100086 | None:intergenic | 35.0% |
| ! | TCTGATCAAGCACTTTTCAA+TGG | - | chr7.4:32100507-32100526 | MS.gene87056:intron | 35.0% |
| AATCCTATCACTGGGTCTAA+TGG | - | chr7.4:32100624-32100643 | MS.gene87056:CDS | 40.0% | |
| AGACCATCTAGATTTGAACC+AGG | + | chr7.4:32099911-32099930 | None:intergenic | 40.0% | |
| AGCACGATTTGTATCATAGC+AGG | + | chr7.4:32099704-32099723 | None:intergenic | 40.0% | |
| AGGTTTCACACCCAAAGAAA+TGG | - | chr7.4:32099952-32099971 | MS.gene87056:intron | 40.0% | |
| GACGATACATCAAGTTTCAC+AGG | - | chr7.4:32099424-32099443 | MS.gene87056:intron | 40.0% | |
| GAGAGAAATAGATTCTGCTG+TGG | - | chr7.4:32098248-32098267 | MS.gene87056:CDS | 40.0% | |
| GGAACCTTAATCCTATCACT+GGG | - | chr7.4:32100616-32100635 | MS.gene87056:CDS | 40.0% | |
| TAGACCCAGTGATAGGATTA+AGG | + | chr7.4:32100623-32100642 | None:intergenic | 40.0% | |
| TCAATTGATTACCCTGCAGT+TGG | + | chr7.4:32100661-32100680 | None:intergenic | 40.0% | |
| TTCACAGGTGAAAAAACAGC+AGG | - | chr7.4:32099439-32099458 | MS.gene87056:intron | 40.0% | |
| TTCATCAACATCTGAGTCTG+TGG | + | chr7.4:32100538-32100557 | None:intergenic | 40.0% | |
| TTCCTCTAGTGCAGTCTTTA+TGG | + | chr7.4:32099506-32099525 | None:intergenic | 40.0% | |
| ! | AAAACTCGGCATTGAGTCTT+AGG | + | chr7.4:32100171-32100190 | None:intergenic | 40.0% |
| ! | CAGAAGAAAAGAGACCCTTT+TGG | + | chr7.4:32100491-32100510 | None:intergenic | 40.0% |
| ! | CCATAACTTGCAAAGCCAAA+AGG | - | chr7.4:32100473-32100492 | MS.gene87056:intron | 40.0% |
| ! | GATCAAGCACTTTTCAATGG+AGG | - | chr7.4:32100510-32100529 | MS.gene87056:intron | 40.0% |
| ! | TTTGGAGTAGTAGTGTCAAG+TGG | + | chr7.4:32100432-32100451 | None:intergenic | 40.0% |
| !!! | CCTTTTGGCTTTGCAAGTTA+TGG | + | chr7.4:32100476-32100495 | None:intergenic | 40.0% |
| AACACAGATTTACCTGGTCC+TGG | - | chr7.4:32099890-32099909 | MS.gene87056:intron | 45.0% | |
| ACCTAGTTGGACAGTGCAAT+TGG | - | chr7.4:32099829-32099848 | MS.gene87056:intron | 45.0% | |
| AGATTCTGCTGTGGGTAATG+AGG | - | chr7.4:32098257-32098276 | MS.gene87056:CDS | 45.0% | |
| CAAATTGTCATCACCACCTG+TGG | + | chr7.4:32100406-32100425 | None:intergenic | 45.0% | |
| CAAGCAAATTGTCCTACCAC+AGG | - | chr7.4:32100387-32100406 | MS.gene87056:intron | 45.0% | |
| CACCATAAAGACTGCACTAG+AGG | - | chr7.4:32099501-32099520 | MS.gene87056:intron | 45.0% | |
| CCTAGTTGGACAGTGCAATT+GGG | - | chr7.4:32099830-32099849 | MS.gene87056:intron | 45.0% | |
| CTGGGTCTAATGGTCAGATT+AGG | - | chr7.4:32100634-32100653 | MS.gene87056:CDS | 45.0% | |
| GGGAACCTTAATCCTATCAC+TGG | - | chr7.4:32100615-32100634 | MS.gene87056:CDS | 45.0% | |
| GGTCCTGGTTCAAATCTAGA+TGG | - | chr7.4:32099905-32099924 | MS.gene87056:intron | 45.0% | |
| TCAGATTAGGACCAACTGCA+GGG | - | chr7.4:32100647-32100666 | MS.gene87056:CDS | 45.0% | |
| TCTAGATTTGAACCAGGACC+AGG | + | chr7.4:32099905-32099924 | None:intergenic | 45.0% | |
| TGACCATTAGACCCAGTGAT+AGG | + | chr7.4:32100630-32100649 | None:intergenic | 45.0% | |
| ! | CACAGGTGGTGATGACAATT+TGG | - | chr7.4:32100404-32100423 | MS.gene87056:intron | 45.0% |
| ATATCCTCTCTGTTGCGGCA+AGG | - | chr7.4:32099554-32099573 | MS.gene87056:intron | 50.0% | |
| CAGCGCATGAGACAGTTCTA+GGG | + | chr7.4:32099534-32099553 | None:intergenic | 50.0% | |
| CCCAATTGCACTGTCCAACT+AGG | + | chr7.4:32099833-32099852 | None:intergenic | 50.0% | |
| CGCTGATATCCTCTCTGTTG+CGG | - | chr7.4:32099549-32099568 | MS.gene87056:intron | 50.0% | |
| GACAGTGCAATTGGGCAGAA+GGG | - | chr7.4:32099838-32099857 | MS.gene87056:intron | 50.0% | |
| GCAAATTGTCCTACCACAGG+TGG | - | chr7.4:32100390-32100409 | MS.gene87056:intron | 50.0% | |
| GTCAGATTAGGACCAACTGC+AGG | - | chr7.4:32100646-32100665 | MS.gene87056:CDS | 50.0% | |
| GTGGGTAATGAGGCTCGTAT+GGG | - | chr7.4:32098267-32098286 | MS.gene87056:CDS | 50.0% | |
| TATCCTCTCTGTTGCGGCAA+GGG | - | chr7.4:32099555-32099574 | MS.gene87056:intron | 50.0% | |
| TCAGCGCATGAGACAGTTCT+AGG | + | chr7.4:32099535-32099554 | None:intergenic | 50.0% | |
| TGGGTAATGAGGCTCGTATG+GGG | - | chr7.4:32098268-32098287 | MS.gene87056:CDS | 50.0% | |
| TGTGGGTAATGAGGCTCGTA+TGG | - | chr7.4:32098266-32098285 | MS.gene87056:CDS | 50.0% | |
| TTCAGCTAGGTGGACCTAGT+TGG | - | chr7.4:32099816-32099835 | MS.gene87056:intron | 50.0% | |
| TTGTCATCACCACCTGTGGT+AGG | + | chr7.4:32100402-32100421 | None:intergenic | 50.0% | |
| CAACTGCAGGTGAGTCAGTG+TGG | - | chr7.4:32098718-32098737 | MS.gene87056:intron | 55.0% | |
| GGACAGTGCAATTGGGCAGA+AGG | - | chr7.4:32099837-32099856 | MS.gene87056:intron | 55.0% | |
| GGGTAATGAGGCTCGTATGG+GGG | - | chr7.4:32098269-32098288 | MS.gene87056:CDS | 55.0% | |
| AGTCCCTTGCCGCAACAGAG+AGG | + | chr7.4:32099561-32099580 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 32098138 | 32100680 | 32098138 | ID=MS.gene87056 |
| chr7.4 | mRNA | 32098138 | 32100680 | 32098138 | ID=MS.gene87056.t1;Parent=MS.gene87056 |
| chr7.4 | exon | 32100548 | 32100680 | 32100548 | ID=MS.gene87056.t1.exon1;Parent=MS.gene87056.t1 |
| chr7.4 | CDS | 32100548 | 32100680 | 32100548 | ID=cds.MS.gene87056.t1;Parent=MS.gene87056.t1 |
| chr7.4 | exon | 32099227 | 32099402 | 32099227 | ID=MS.gene87056.t1.exon2;Parent=MS.gene87056.t1 |
| chr7.4 | CDS | 32099227 | 32099402 | 32099227 | ID=cds.MS.gene87056.t1;Parent=MS.gene87056.t1 |
| chr7.4 | exon | 32098832 | 32098997 | 32098832 | ID=MS.gene87056.t1.exon3;Parent=MS.gene87056.t1 |
| chr7.4 | CDS | 32098832 | 32098997 | 32098832 | ID=cds.MS.gene87056.t1;Parent=MS.gene87056.t1 |
| chr7.4 | exon | 32098138 | 32098523 | 32098138 | ID=MS.gene87056.t1.exon4;Parent=MS.gene87056.t1 |
| chr7.4 | CDS | 32098138 | 32098523 | 32098138 | ID=cds.MS.gene87056.t1;Parent=MS.gene87056.t1 |
| Gene Sequence |
| Protein sequence |
