AlfalfaGEDB | MS.gene96791

M. sativa cultivar XinJiangDaYe / MS.gene96791

KEGG: -
GO: GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0097159 GO:1901363
PFAM: PF00249.34 PF14379.9

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene96791.t1	XP_003607716.2	97.1	340	9	1	1	340	1	339	2.70E-155	558.1

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene96791.t1	F4I274	52.1	311	107	10	1	297	18	300	1.9e-48	194.5

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene96791.t1	G7JF47	97.1	340	9	1	1	340	1	339	2.0e-155	558.1

TFs/TRs:

Gene ID	Type	Classification
MS.gene96791.t1	TF	GARP-G2-like

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049159	MS.gene96791	0.826591	2.49E-54	-1.69E-46
MS.gene049230	MS.gene96791	0.815565	8.66E-52	-1.69E-46
MS.gene049272	MS.gene96791	0.800618	1.32E-48	-1.69E-46
MS.gene049378	MS.gene96791	0.80917	2.16E-50	-1.69E-46
MS.gene049647	MS.gene96791	0.821919	3.12E-53	-1.69E-46
MS.gene050156	MS.gene96791	0.806218	9.15E-50	-1.69E-46
MS.gene050226	MS.gene96791	0.805584	1.24E-49	-1.69E-46
MS.gene050227	MS.gene96791	0.824245	8.96E-54	-1.69E-46
MS.gene050228	MS.gene96791	0.806884	6.62E-50	-1.69E-46
MS.gene050442	MS.gene96791	0.826169	3.14E-54	-1.69E-46
MS.gene050680	MS.gene96791	0.805938	1.05E-49	-1.69E-46
MS.gene050719	MS.gene96791	0.842572	2.38E-58	-1.69E-46
MS.gene050721	MS.gene96791	0.843753	1.15E-58	-1.69E-46
MS.gene050724	MS.gene96791	0.82765	1.39E-54	-1.69E-46
MS.gene050780	MS.gene96791	0.801237	9.90E-49	-1.69E-46
MS.gene050844	MS.gene96791	0.836697	8.04E-57	-1.69E-46
MS.gene051180	MS.gene96791	0.807991	3.86E-50	-1.69E-46
MS.gene051210	MS.gene96791	0.809329	2.00E-50	-1.69E-46
MS.gene051935	MS.gene96791	0.808299	3.32E-50	-1.69E-46
MS.gene052012	MS.gene96791	0.8333	5.77E-56	-1.69E-46
MS.gene052020	MS.gene96791	0.813528	2.45E-51	-1.69E-46
MS.gene052176	MS.gene96791	0.805972	1.03E-49	-1.69E-46
MS.gene052190	MS.gene96791	0.824806	6.61E-54	-1.69E-46
MS.gene052323	MS.gene96791	0.825305	5.04E-54	-1.69E-46
MS.gene052333	MS.gene96791	0.811508	6.76E-51	-1.69E-46
MS.gene052384	MS.gene96791	0.838789	2.33E-57	-1.69E-46
MS.gene052519	MS.gene96791	0.817438	3.30E-52	-1.69E-46
MS.gene052611	MS.gene96791	0.810959	8.89E-51	-1.69E-46
MS.gene052773	MS.gene96791	0.809906	1.50E-50	-1.69E-46
MS.gene052863	MS.gene96791	0.8364	9.57E-57	-1.69E-46
MS.gene052896	MS.gene96791	0.82855	8.45E-55	-1.69E-46
MS.gene052954	MS.gene96791	0.807309	5.38E-50	-1.69E-46
MS.gene053008	MS.gene96791	0.827072	1.91E-54	-1.69E-46
MS.gene053166	MS.gene96791	0.815514	8.89E-52	-1.69E-46
MS.gene053201	MS.gene96791	0.813289	2.76E-51	-1.69E-46
MS.gene053221	MS.gene96791	0.805529	1.28E-49	-1.69E-46
MS.gene053226	MS.gene96791	0.819956	8.84E-53	-1.69E-46
MS.gene05415	MS.gene96791	0.800853	1.19E-48	-1.69E-46
MS.gene054468	MS.gene96791	0.831302	1.80E-55	-1.69E-46
MS.gene054479	MS.gene96791	0.80751	4.88E-50	-1.69E-46
MS.gene054651	MS.gene96791	0.812863	3.42E-51	-1.69E-46
MS.gene054658	MS.gene96791	0.808459	3.07E-50	-1.69E-46
MS.gene05510	MS.gene96791	0.800652	1.30E-48	-1.69E-46
MS.gene055356	MS.gene96791	0.807112	5.93E-50	-1.69E-46
MS.gene055358	MS.gene96791	0.802016	6.85E-49	-1.69E-46
MS.gene055363	MS.gene96791	0.818724	1.69E-52	-1.69E-46
MS.gene055623	MS.gene96791	0.807108	5.94E-50	-1.69E-46
MS.gene055701	MS.gene96791	0.808692	2.73E-50	-1.69E-46
MS.gene055778	MS.gene96791	0.81113	8.17E-51	-1.69E-46
MS.gene055818	MS.gene96791	0.833636	4.76E-56	-1.69E-46
MS.gene05604	MS.gene96791	0.80642	8.30E-50	-1.69E-46
MS.gene056173	MS.gene96791	0.813431	2.57E-51	-1.69E-46
MS.gene056506	MS.gene96791	0.82847	8.83E-55	-1.69E-46
MS.gene057026	MS.gene96791	0.827366	1.63E-54	-1.69E-46
MS.gene057693	MS.gene96791	0.806886	6.62E-50	-1.69E-46
MS.gene057915	MS.gene96791	0.806008	1.01E-49	-1.69E-46
MS.gene057980	MS.gene96791	0.821788	3.35E-53	-1.69E-46
MS.gene058009	MS.gene96791	0.815519	8.87E-52	-1.69E-46
MS.gene058399	MS.gene96791	0.820113	8.14E-53	-1.69E-46
MS.gene058625	MS.gene96791	0.829013	6.53E-55	-1.69E-46
MS.gene058636	MS.gene96791	0.824186	9.25E-54	-1.69E-46
MS.gene058829	MS.gene96791	0.83093	2.22E-55	-1.69E-46
MS.gene058979	MS.gene96791	0.829296	5.57E-55	-1.69E-46
MS.gene059713	MS.gene96791	0.804696	1.91E-49	-1.69E-46
MS.gene059789	MS.gene96791	0.823312	1.48E-53	-1.69E-46
MS.gene059842	MS.gene96791	0.805515	1.29E-49	-1.69E-46
MS.gene060322	MS.gene96791	0.830503	2.83E-55	-1.69E-46
MS.gene06052	MS.gene96791	0.814606	1.41E-51	-1.69E-46
MS.gene060572	MS.gene96791	0.830697	2.54E-55	-1.69E-46
MS.gene060637	MS.gene96791	0.800297	1.54E-48	-1.69E-46
MS.gene060683	MS.gene96791	0.849579	2.95E-60	-1.69E-46
MS.gene060685	MS.gene96791	0.8437	1.19E-58	-1.69E-46
MS.gene060781	MS.gene96791	0.805471	1.31E-49	-1.69E-46
MS.gene060803	MS.gene96791	0.82042	6.92E-53	-1.69E-46
MS.gene060998	MS.gene96791	0.80101	1.10E-48	-1.69E-46
MS.gene061040	MS.gene96791	-0.806182	9.31E-50	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene96791.t1	MTR_4g081710	97.941	340	6	1	1	340	1	339	0.0	681
MS.gene96791.t1	MTR_5g041350	61.648	352	117	6	4	340	2	350	2.64e-128	371
MS.gene96791.t1	MTR_5g041350	54.023	261	103	5	94	340	4	261	1.91e-68	215
MS.gene96791.t1	MTR_2g086450	49.791	239	99	5	10	238	38	265	4.04e-67	216
MS.gene96791.t1	MTR_6g032990	39.946	368	174	9	10	338	35	394	3.87e-62	203
MS.gene96791.t1	MTR_5g041350	53.306	242	96	5	113	340	1	239	1.46e-59	192
MS.gene96791.t1	MTR_6g444980	51.381	181	73	5	10	184	28	199	7.16e-52	176
MS.gene96791.t1	MTR_5g027440	46.809	188	88	4	7	190	15	194	2.24e-48	164
MS.gene96791.t1	MTR_6g444980	55.245	143	54	3	10	151	28	161	7.63e-46	159
MS.gene96791.t1	MTR_7g088070	50.920	163	70	3	16	178	49	201	4.32e-45	155
MS.gene96791.t1	MTR_7g088070	50.307	163	67	4	16	178	49	197	1.52e-43	151
MS.gene96791.t1	MTR_2g027860	48.148	162	60	4	17	171	49	193	1.41e-42	150
MS.gene96791.t1	MTR_2g027800	40.833	240	114	8	10	233	32	259	3.97e-41	146
MS.gene96791.t1	MTR_2g027800	40.084	237	106	7	10	233	32	245	9.58e-40	142
MS.gene96791.t1	MTR_1g090670	40.870	230	105	8	10	232	37	242	4.40e-39	140
MS.gene96791.t1	MTR_7g098250	42.424	165	78	4	13	175	258	407	2.70e-36	137
MS.gene96791.t1	MTR_7g115530	35.593	236	114	6	17	248	218	419	6.46e-35	132
MS.gene96791.t1	MTR_1g080330	43.210	162	72	4	13	168	171	318	9.14e-35	131
MS.gene96791.t1	MTR_1g053835	42.282	149	71	3	13	160	254	388	4.04e-33	127
MS.gene96791.t1	MTR_7g093030	38.356	146	74	3	16	159	211	342	5.69e-29	115
MS.gene96791.t1	MTR_7g115530	45.528	123	50	3	17	136	218	326	7.28e-27	108
MS.gene96791.t1	MTR_1g080330	41.732	127	55	3	13	135	171	282	2.40e-26	106
MS.gene96791.t1	MTR_7g068600	39.041	146	71	4	13	153	9	141	2.28e-25	102
MS.gene96791.t1	MTR_1g053800	37.931	145	74	3	12	154	172	302	1.06e-21	94.4
MS.gene96791.t1	MTR_7g115530	53.333	75	33	1	17	89	218	292	6.74e-21	91.7
MS.gene96791.t1	MTR_7g115530	47.436	78	36	1	17	89	218	295	2.85e-20	90.9
MS.gene96791.t1	MTR_7g093030	55.172	58	26	0	16	73	211	268	9.91e-19	85.5
MS.gene96791.t1	MTR_7g115530	61.538	52	20	0	17	68	218	269	3.10e-18	83.6
MS.gene96791.t1	MTR_7g115530	58.491	53	22	0	17	69	218	270	1.82e-17	82.0
MS.gene96791.t1	MTR_1g053830	47.541	61	32	0	13	73	14	74	4.10e-17	76.3
MS.gene96791.t1	MTR_1g090670	36.649	191	90	9	49	232	1	167	7.96e-17	78.6
MS.gene96791.t1	MTR_6g071625	40.860	93	49	2	18	104	203	295	9.78e-16	77.8
MS.gene96791.t1	MTR_8g066310	37.838	111	67	2	18	128	174	282	1.37e-15	77.0
MS.gene96791.t1	MTR_7g069660	56.604	53	23	0	18	70	72	124	2.67e-15	76.3
MS.gene96791.t1	MTR_3g450310	49.180	61	31	0	17	77	19	79	8.61e-15	72.8
MS.gene96791.t1	MTR_1g112370	60.377	53	21	0	18	70	23	75	9.51e-15	74.3
MS.gene96791.t1	MTR_0223s0040	45.679	81	41	1	18	95	19	99	9.52e-15	73.9
MS.gene96791.t1	MTR_2g023580	50.000	60	30	0	18	77	56	115	1.02e-14	73.2
MS.gene96791.t1	MTR_4g121020	55.932	59	25	1	13	71	107	164	2.44e-14	74.3
MS.gene96791.t1	MTR_4g121020	55.932	59	25	1	13	71	211	268	2.44e-14	74.3
MS.gene96791.t1	MTR_4g121020	55.932	59	25	1	13	71	211	268	2.44e-14	74.3
MS.gene96791.t1	MTR_2g034960	52.857	70	26	2	13	76	207	275	3.30e-14	73.9
MS.gene96791.t1	MTR_5g029470	44.048	84	46	1	18	101	220	302	3.74e-14	73.2
MS.gene96791.t1	MTR_4g021790	54.545	55	24	1	17	71	168	221	5.10e-14	71.6
MS.gene96791.t1	MTR_3g064840	47.826	69	36	0	18	86	275	343	5.83e-14	72.8
MS.gene96791.t1	MTR_1g021520	52.632	57	27	0	18	74	127	183	9.31e-14	71.2
MS.gene96791.t1	MTR_8g086410	51.786	56	27	0	18	73	110	165	1.05e-13	72.0
MS.gene96791.t1	MTR_8g086410	51.786	56	27	0	18	73	112	167	1.07e-13	72.0
MS.gene96791.t1	MTR_1g032570	52.542	59	27	1	13	71	127	184	1.36e-13	72.0
MS.gene96791.t1	MTR_5g017980	42.697	89	50	1	17	105	193	280	1.49e-13	70.9
MS.gene96791.t1	MTR_1g032570	52.542	59	27	1	13	71	196	253	1.57e-13	72.0
MS.gene96791.t1	MTR_2g016220	54.717	53	24	0	18	70	90	142	1.72e-13	71.2
MS.gene96791.t1	MTR_2g084230	50.794	63	28	1	18	77	98	160	1.76e-13	70.5
MS.gene96791.t1	MTR_2g084230	50.794	63	28	1	18	77	98	160	1.79e-13	71.2
MS.gene96791.t1	MTR_2g016220	54.717	53	24	0	18	70	90	142	1.91e-13	70.9
MS.gene96791.t1	MTR_1g093080	58.182	55	23	0	17	71	211	265	8.62e-13	68.9
MS.gene96791.t1	MTR_4g131600	49.153	59	29	1	13	71	197	254	1.06e-12	69.3
MS.gene96791.t1	MTR_7g093010	32.593	135	81	2	17	151	213	337	1.31e-12	68.2
MS.gene96791.t1	MTR_8g086410	43.077	65	33	1	18	78	112	176	1.71e-12	68.2
MS.gene96791.t1	MTR_4g021855	52.727	55	25	1	17	71	168	221	2.30e-12	67.0
MS.gene96791.t1	MTR_2g016220	45.161	62	33	1	18	78	90	151	4.03e-12	67.0
MS.gene96791.t1	MTR_2g450070	49.153	59	29	1	13	71	209	266	5.36e-12	67.4
MS.gene96791.t1	MTR_2g450070	49.153	59	29	1	13	71	209	266	5.43e-12	67.4
MS.gene96791.t1	MTR_4g021760	51.852	54	25	1	17	70	169	221	7.30e-12	65.9
MS.gene96791.t1	MTR_7g089010	52.727	55	25	1	17	71	91	144	1.10e-11	65.1
MS.gene96791.t1	MTR_4g064730	43.421	76	36	2	14	83	128	202	1.22e-11	65.1
MS.gene96791.t1	MTR_4g086835	44.000	75	41	1	14	88	271	344	1.33e-11	65.5
MS.gene96791.t1	MTR_1g013170	43.056	72	38	2	17	88	191	259	2.03e-11	65.1
MS.gene96791.t1	MTR_4g113140	50.000	58	29	0	14	71	232	289	8.30e-11	63.2
MS.gene96791.t1	MTR_5g054300	52.727	55	26	0	17	71	198	252	9.17e-11	62.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene96791.t1	AT1G69580	50.000	308	118	10	1	297	18	300	6.18e-81	250
MS.gene96791.t1	AT1G69580	49.191	309	120	10	1	297	18	301	3.17e-79	245
MS.gene96791.t1	AT3G04030	51.282	234	97	5	10	235	38	262	3.16e-65	211
MS.gene96791.t1	AT3G04030	50.427	234	98	6	10	235	38	261	4.20e-62	203
MS.gene96791.t1	AT5G18240	49.138	232	105	5	10	235	38	262	4.37e-62	203
MS.gene96791.t1	AT5G18240	49.138	232	105	5	10	235	38	262	4.37e-62	203
MS.gene96791.t1	AT3G24120	45.852	229	111	4	10	229	34	258	5.24e-59	192
MS.gene96791.t1	AT5G18240	48.276	232	105	6	10	235	38	260	1.03e-58	194
MS.gene96791.t1	AT3G04030	49.145	234	96	6	10	235	38	256	1.74e-58	194
MS.gene96791.t1	AT4G13640	48.918	231	99	7	10	230	30	251	3.95e-58	190
MS.gene96791.t1	AT3G24120	45.259	232	111	5	10	229	34	261	1.04e-56	186
MS.gene96791.t1	AT4G13640	48.291	234	99	8	10	230	30	254	5.55e-56	184
MS.gene96791.t1	AT5G18240	46.983	232	104	6	10	235	38	256	2.02e-55	186
MS.gene96791.t1	AT5G18240	46.983	232	104	6	10	235	38	256	2.02e-55	186
MS.gene96791.t1	AT1G79430	53.247	154	64	1	10	163	27	172	1.39e-49	169
MS.gene96791.t1	AT5G45580	48.734	158	74	3	11	161	1	158	2.12e-44	153
MS.gene96791.t1	AT5G45580	48.428	159	75	3	10	161	16	174	2.19e-44	154
MS.gene96791.t1	AT2G01060	46.584	161	70	2	16	173	14	161	2.45e-43	151
MS.gene96791.t1	AT3G12730	50.000	152	71	3	10	160	16	163	1.18e-42	148
MS.gene96791.t1	AT3G04030	46.667	195	87	5	49	235	1	186	1.10e-39	142
MS.gene96791.t1	AT3G04450	41.463	164	86	3	13	175	194	348	1.01e-34	131
MS.gene96791.t1	AT3G04450	41.463	164	86	3	13	175	194	348	1.01e-34	131
MS.gene96791.t1	AT3G04450	40.571	175	94	3	13	186	234	399	1.86e-34	131
MS.gene96791.t1	AT5G29000	43.210	162	72	3	16	171	187	334	2.65e-34	129
MS.gene96791.t1	AT5G29000	43.210	162	72	3	16	171	187	334	2.65e-34	129
MS.gene96791.t1	AT4G28610	42.949	156	75	3	16	169	224	367	3.37e-34	130
MS.gene96791.t1	AT5G29000	43.210	162	72	3	16	171	230	377	6.35e-34	129
MS.gene96791.t1	AT3G04030	44.103	195	86	6	49	235	1	180	3.86e-33	125
MS.gene96791.t1	AT5G06800	42.466	146	71	3	17	159	192	327	7.35e-32	123
MS.gene96791.t1	AT3G13040	37.037	189	105	3	13	197	237	415	7.46e-31	121
MS.gene96791.t1	AT3G13040	37.037	189	105	3	13	197	237	415	7.46e-31	121
MS.gene96791.t1	AT3G13040	37.037	189	105	3	13	197	237	415	7.46e-31	121
MS.gene96791.t1	AT5G06800	41.259	143	72	3	17	159	192	322	8.31e-31	120
MS.gene96791.t1	AT5G18240	41.969	193	93	6	49	235	1	180	9.25e-31	119
MS.gene96791.t1	AT2G20400	40.541	148	72	2	19	163	233	367	8.12e-30	118
MS.gene96791.t1	AT2G20400	41.216	148	70	3	19	163	233	366	2.77e-29	116
MS.gene96791.t1	AT1G79430	47.826	115	52	1	49	163	1	107	2.09e-26	106
MS.gene96791.t1	AT2G01060	41.600	125	57	2	52	173	1	112	3.65e-22	94.0
MS.gene96791.t1	AT3G04450	57.377	61	26	0	13	73	234	294	6.48e-20	89.0
MS.gene96791.t1	AT5G29000	56.897	58	25	0	16	73	230	287	2.66e-19	87.4
MS.gene96791.t1	AT3G12730	43.363	113	59	3	49	160	1	109	6.63e-19	83.6
MS.gene96791.t1	AT5G06800	54.386	57	26	0	17	73	192	248	8.82e-18	82.4
MS.gene96791.t1	AT2G06020	50.000	64	32	0	10	73	79	142	5.28e-17	80.9
MS.gene96791.t1	AT4G17695	49.275	69	35	0	18	86	165	233	4.08e-15	75.5
MS.gene96791.t1	AT1G32240	37.864	103	64	0	18	120	214	316	4.88e-15	75.9
MS.gene96791.t1	AT1G32240	37.864	103	64	0	18	120	214	316	5.52e-15	75.5
MS.gene96791.t1	AT1G14600	56.604	53	23	0	18	70	24	76	6.70e-15	73.9
MS.gene96791.t1	AT4G04605	52.830	53	25	0	18	70	15	67	1.47e-14	72.4
MS.gene96791.t1	AT2G38300	56.604	53	23	0	18	70	55	107	3.31e-14	73.2
MS.gene96791.t1	AT5G42630	49.231	65	27	1	18	82	106	164	4.04e-14	71.2
MS.gene96791.t1	AT5G16560	54.386	57	26	0	18	74	220	276	4.20e-14	73.2
MS.gene96791.t1	AT2G02060	49.180	61	31	0	18	78	30	90	7.27e-14	70.9
MS.gene96791.t1	AT2G02060	49.180	61	31	0	18	78	30	90	7.27e-14	70.9
MS.gene96791.t1	AT3G16857	56.364	55	23	1	17	71	167	220	7.46e-14	72.8
MS.gene96791.t1	AT5G42630	49.231	65	27	1	18	82	106	164	7.71e-14	71.2
MS.gene96791.t1	AT3G16857	56.364	55	23	1	17	71	237	290	8.18e-14	72.8
MS.gene96791.t1	AT3G16857	56.364	55	23	1	17	71	237	290	8.74e-14	72.8
MS.gene96791.t1	AT4G04580	52.830	53	25	0	18	70	15	67	1.05e-13	68.6
MS.gene96791.t1	AT2G42660	50.943	53	26	0	18	70	51	103	2.23e-13	69.7
MS.gene96791.t1	AT2G40260	49.153	59	30	0	18	76	83	141	3.77e-13	70.5
MS.gene96791.t1	AT5G45580	39.423	104	56	3	65	161	16	119	1.39e-12	66.6
MS.gene96791.t1	AT3G25790	47.619	63	33	0	22	84	201	263	1.75e-12	68.2
MS.gene96791.t1	AT5G59570	50.000	58	28	1	14	71	138	194	1.79e-12	67.4
MS.gene96791.t1	AT5G59570	50.000	58	28	1	14	71	138	194	1.79e-12	67.4
MS.gene96791.t1	AT5G05090	52.727	55	25	1	17	71	81	134	3.21e-12	66.2
MS.gene96791.t1	AT3G10760	52.727	55	25	1	17	71	105	158	4.18e-12	66.6
MS.gene96791.t1	AT2G40970	51.724	58	27	1	14	71	102	158	6.27e-12	65.1
MS.gene96791.t1	AT5G58080	53.448	58	26	1	14	71	191	247	6.54e-12	67.0
MS.gene96791.t1	AT3G46640	50.909	55	26	1	17	71	144	197	1.04e-11	65.5
MS.gene96791.t1	AT3G46640	50.909	55	26	1	17	71	144	197	1.07e-11	65.5
MS.gene96791.t1	AT3G46640	50.909	55	26	1	17	71	144	197	1.07e-11	65.5
MS.gene96791.t1	AT4G37180	50.943	53	26	0	19	71	212	264	1.10e-11	65.5
MS.gene96791.t1	AT4G37180	50.943	53	26	0	19	71	219	271	1.19e-11	65.5
MS.gene96791.t1	AT2G25180	38.298	94	51	2	17	104	195	287	1.22e-11	66.2
MS.gene96791.t1	AT2G01760	49.091	55	27	1	17	71	135	188	1.53e-11	65.1
MS.gene96791.t1	AT2G01760	49.091	55	27	1	17	71	200	253	2.03e-11	65.1
MS.gene96791.t1	AT1G67710	49.057	53	27	0	19	71	121	173	2.61e-11	64.7
MS.gene96791.t1	AT2G01760	49.091	55	27	1	17	71	228	281	3.09e-11	64.3
MS.gene96791.t1	AT1G67710	49.057	53	27	0	19	71	195	247	3.51e-11	64.7
MS.gene96791.t1	AT1G67710	49.057	53	27	0	19	71	130	182	3.55e-11	64.3
MS.gene96791.t1	AT1G68670	50.725	69	29	1	3	71	206	269	3.64e-11	63.9
MS.gene96791.t1	AT1G25550	51.724	58	28	0	14	71	206	263	4.07e-11	63.9
MS.gene96791.t1	AT1G49190	51.724	58	25	1	17	71	215	272	9.70e-11	63.2

Find 54 sgRNAs with CRISPR-Local

Find 77 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ACTGAAATACTATTATAATT+TGG	0.196696	4.3:-28471286	None:intergenic
GTCCTGAATGTTCTTCCTTC+TGG	0.229614	4.3:-28471334	None:intergenic
ATTACTCAGTGGTTTGGTTC+TGG	0.295890	4.3:-28470676	None:intergenic
GTTTCTGTTAGTTCTGAAAT+TGG	0.299096	4.3:-28471127	None:intergenic
AGTGTTCTCAGCCTCATTTA+TGG	0.303454	4.3:-28471263	None:intergenic
CCATCTTAAAAGTCATTTAC+AGG	0.331529	4.3:+28470384	MS.gene96791:CDS
TAATTGCATCAGTGAATCTT+TGG	0.343412	4.3:-28470189	None:intergenic
TTCAGTTGAATTGCCACTAA+TGG	0.344818	4.3:+28471303	MS.gene96791:CDS
ACCTTGTTTGTTGTCAGAAC+AGG	0.382827	4.3:-28470516	None:intergenic
ATCACCCTCATCAAACTCTT+TGG	0.386936	4.3:-28470337	None:intergenic
ATGCTAAGCCTAGGCTGAAA+TGG	0.395318	4.3:+28470152	MS.gene96791:CDS
TTAACTATTACTCAGTGGTT+TGG	0.396613	4.3:-28470682	None:intergenic
ATGAGGGTGATGGGAATTCC+AGG	0.406362	4.3:+28470349	MS.gene96791:CDS
AAAGAACCAAACGCATGCTT+TGG	0.416759	4.3:-28470123	None:intergenic
TGTTCTTCCTTCTGGCTCAA+TGG	0.419447	4.3:-28471326	None:intergenic
AAGGCGCAGGAAGCACTTGC+AGG	0.427854	4.3:+28471007	MS.gene96791:CDS
AGCCAGAAGGAAGAACATTC+AGG	0.434059	4.3:+28471332	MS.gene96791:CDS
TCTTCTTCTTCTTCGACAAC+GGG	0.438944	4.3:+28471037	MS.gene96791:CDS
GCAAAACCAAAGCATGCGTT+TGG	0.448457	4.3:+28470117	MS.gene96791:CDS
TCTGGCTCAATGGCCATTAG+TGG	0.472385	4.3:-28471316	None:intergenic
AGTTCTGAAATTGGAGAACT+AGG	0.474659	4.3:-28471118	None:intergenic
GAAACTTTATGAACAAATTG+AGG	0.475081	4.3:+28470831	MS.gene96791:CDS
TCATGAGTCCATTTCAGCCT+AGG	0.479144	4.3:-28470160	None:intergenic
ACTGATGCAATTAATCAGCT+TGG	0.488534	4.3:+28470199	MS.gene96791:CDS
CAGAACAGGTTTCTACCTGT+TGG	0.489939	4.3:-28470502	None:intergenic
TAGACTTGGCAAAAGCCAAC+AGG	0.499299	4.3:+28470487	MS.gene96791:CDS
TTCAGGACTAATGCAAATGA+TGG	0.500805	4.3:+28471349	MS.gene96791:CDS
TGAGGCTCTTGAAGTACAAA+TGG	0.509949	4.3:+28470798	MS.gene96791:CDS
AGATGGTACAAAGTGAGTCC+TGG	0.514393	4.3:-28470367	None:intergenic
CTTACAATCGGTACTAATGA+AGG	0.524871	4.3:+28470988	MS.gene96791:CDS
AAGAGTTTGATGAGGGTGAT+GGG	0.525589	4.3:+28470340	MS.gene96791:CDS
CAGCCTAGGCTTAGCATCAG+TGG	0.528866	4.3:-28470146	None:intergenic
TGCAGTAGAGAAATCAGTGT+TGG	0.530962	4.3:+28470650	MS.gene96791:CDS
TCAAGGAAAGTACTTACAAT+CGG	0.534694	4.3:+28470976	MS.gene96791:CDS
AAAGAGTTTGATGAGGGTGA+TGG	0.538821	4.3:+28470339	MS.gene96791:CDS
AATGCAAATGATGGAGGCAG+TGG	0.542725	4.3:+28471358	MS.gene96791:CDS
CAGTTTAGAATTGAAGCTCA+AGG	0.543693	4.3:+28470959	MS.gene96791:CDS
TTTCCACTGATGCTAAGCCT+AGG	0.552556	4.3:+28470143	MS.gene96791:CDS
TGAAAGCTCCGAGAGAAAAG+AGG	0.555833	4.3:+28471231	MS.gene96791:CDS
GATGCAATTAATCAGCTTGG+AGG	0.562956	4.3:+28470202	MS.gene96791:CDS
TTAGTTTAAACTCTGGTGAG+AGG	0.563350	4.3:+28471158	MS.gene96791:CDS
GGTGAGAGGAAACAAAATAG+AGG	0.570215	4.3:+28471172	MS.gene96791:CDS
ATCGGTACTAATGAAGGCGC+AGG	0.585210	4.3:+28470994	MS.gene96791:CDS
TCAGAACTAACAGAAACAAG+AGG	0.597866	4.3:+28471133	MS.gene96791:CDS
ATAGAAATTCAAAACAGTGA+TGG	0.607108	4.3:+28470623	MS.gene96791:CDS
ACCTGTTCTGACAACAAACA+AGG	0.624931	4.3:+28470515	MS.gene96791:CDS
TTATTACAGAAATATAGACT+TGG	0.629448	4.3:+28470473	MS.gene96791:intron
ATGCAAATGATGGAGGCAGT+GGG	0.630313	4.3:+28471359	MS.gene96791:CDS
AGATGTGTTGATCAACCAGA+TGG	0.635020	4.3:+28471415	MS.gene96791:CDS
AACACCAAAGAGTTTGATGA+GGG	0.637512	4.3:+28470333	MS.gene96791:CDS
TAGAAGCTTGAAGATTGCTG+AGG	0.644476	4.3:+28470780	MS.gene96791:intron
CAACACCAAAGAGTTTGATG+AGG	0.646969	4.3:+28470332	MS.gene96791:CDS
AGGACTAATGCAAATGATGG+AGG	0.649217	4.3:+28471352	MS.gene96791:CDS
CTAATGGCCATTGAGCCAGA+AGG	0.682174	4.3:+28471319	MS.gene96791:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ACTGAAATACTATTATAATT+TGG	-	chr4.3:28471289-28471308	None:intergenic	15.0%
!!	TTATTACAGAAATATAGACT+TGG	+	chr4.3:28470473-28470492	MS.gene96791:intron	20.0%
!	ATAGAAATTCAAAACAGTGA+TGG	+	chr4.3:28470623-28470642	MS.gene96791:CDS	25.0%
!	ATGATTAAGGACATGTTAAT+CGG	+	chr4.3:28470903-28470922	MS.gene96791:intron	25.0%
!	GAAACTTTATGAACAAATTG+AGG	+	chr4.3:28470831-28470850	MS.gene96791:CDS	25.0%
!	TCAAATTAACTATTACTCAG+TGG	-	chr4.3:28470690-28470709	None:intergenic	25.0%
!!	TTTTTCACACTATGTATATG+TGG	+	chr4.3:28470303-28470322	MS.gene96791:intron	25.0%
!!!	AATCTTGAGTTATTGATTCA+TGG	+	chr4.3:28470590-28470609	MS.gene96791:intron	25.0%
!!!	TTTGAGCTTATTTGATTTTC+TGG	+	chr4.3:28470450-28470469	MS.gene96791:intron	25.0%
	AAATATGTGGCAAAAAACTG+AGG	+	chr4.3:28471440-28471459	MS.gene96791:CDS	30.0%
	ATCAATACTCATTCCTATCT+AGG	+	chr4.3:28470871-28470890	MS.gene96791:intron	30.0%
	CCATCTTAAAAGTCATTTAC+AGG	+	chr4.3:28470384-28470403	MS.gene96791:CDS	30.0%
	GGAAAAACAAACCATAAATG+AGG	+	chr4.3:28471252-28471271	MS.gene96791:CDS	30.0%
	TAATTGCATCAGTGAATCTT+TGG	-	chr4.3:28470192-28470211	None:intergenic	30.0%
	TATGACAGTAATAGAATGAC+TGG	+	chr4.3:28470548-28470567	MS.gene96791:intron	30.0%
	TTAACTATTACTCAGTGGTT+TGG	-	chr4.3:28470685-28470704	None:intergenic	30.0%
!	GCTCAAACTCTTATAGTTTT+TGG	-	chr4.3:28470437-28470456	None:intergenic	30.0%
!	TAGGTTTCAAGTGATGATTA+AGG	+	chr4.3:28470890-28470909	MS.gene96791:intron	30.0%
!!	CCTGTAAATGACTTTTAAGA+TGG	-	chr4.3:28470387-28470406	None:intergenic	30.0%
!!	GTTTCTGTTAGTTCTGAAAT+TGG	-	chr4.3:28471130-28471149	None:intergenic	30.0%
!!	TCAAGGAAAGTACTTACAAT+CGG	+	chr4.3:28470976-28470995	MS.gene96791:CDS	30.0%
!!	TTGTTTTTCCTCTTTTCTCT+CGG	-	chr4.3:28471242-28471261	None:intergenic	30.0%
!!!	AGAGGTTTTAGTTTAAACTC+TGG	+	chr4.3:28471151-28471170	MS.gene96791:CDS	30.0%
!!!	AGTGCAACTATTGATTTTGA+TGG	+	chr4.3:28471391-28471410	MS.gene96791:CDS	30.0%
	AACACCAAAGAGTTTGATGA+GGG	+	chr4.3:28470333-28470352	MS.gene96791:CDS	35.0%
	ACTGATGCAATTAATCAGCT+TGG	+	chr4.3:28470199-28470218	MS.gene96791:CDS	35.0%
	CAACCAGATGGAAAAATATG+TGG	+	chr4.3:28471427-28471446	MS.gene96791:CDS	35.0%
	CTTACAATCGGTACTAATGA+AGG	+	chr4.3:28470988-28471007	MS.gene96791:CDS	35.0%
	TCAGAACTAACAGAAACAAG+AGG	+	chr4.3:28471133-28471152	MS.gene96791:CDS	35.0%
	TCATCACTTGAAACCTAGAT+AGG	-	chr4.3:28470887-28470906	None:intergenic	35.0%
	TGGCAAAAAACTGAGGAAAT+CGG	+	chr4.3:28471447-28471466	MS.gene96791:CDS	35.0%
	TTAGTTTAAACTCTGGTGAG+AGG	+	chr4.3:28471158-28471177	MS.gene96791:CDS	35.0%
	TTCAGGACTAATGCAAATGA+TGG	+	chr4.3:28471349-28471368	MS.gene96791:CDS	35.0%
	TTCAGTTGAATTGCCACTAA+TGG	+	chr4.3:28471303-28471322	MS.gene96791:CDS	35.0%
	TTCTTCTTCTTCTTCGACAA+CGG	+	chr4.3:28471036-28471055	MS.gene96791:CDS	35.0%
!	CAGTTTAGAATTGAAGCTCA+AGG	+	chr4.3:28470959-28470978	MS.gene96791:CDS	35.0%
!	TCGGTTTGAAACATGATTTC+AGG	+	chr4.3:28470922-28470941	MS.gene96791:intron	35.0%
!	TGACTGGTAGTTTTCTGATT+TGG	+	chr4.3:28470564-28470583	MS.gene96791:intron	35.0%
!	TTGCCACATATTTTTCCATC+TGG	-	chr4.3:28471433-28471452	None:intergenic	35.0%
!!	AGTTCTGAAATTGGAGAACT+AGG	-	chr4.3:28471121-28471140	None:intergenic	35.0%
	AAAGAACCAAACGCATGCTT+TGG	-	chr4.3:28470126-28470145	None:intergenic	40.0%
	AAAGAGTTTGATGAGGGTGA+TGG	+	chr4.3:28470339-28470358	MS.gene96791:CDS	40.0%
	AAGAGTTTGATGAGGGTGAT+GGG	+	chr4.3:28470340-28470359	MS.gene96791:CDS	40.0%
	ACACTATGTATATGTGGCAG+AGG	+	chr4.3:28470309-28470328	MS.gene96791:intron	40.0%
	ACCTGTTCTGACAACAAACA+AGG	+	chr4.3:28470515-28470534	MS.gene96791:CDS	40.0%
	AGGACTAATGCAAATGATGG+AGG	+	chr4.3:28471352-28471371	MS.gene96791:CDS	40.0%
	AGTGTTCTCAGCCTCATTTA+TGG	-	chr4.3:28471266-28471285	None:intergenic	40.0%
	ATCACCCTCATCAAACTCTT+TGG	-	chr4.3:28470340-28470359	None:intergenic	40.0%
	CAACACCAAAGAGTTTGATG+AGG	+	chr4.3:28470332-28470351	MS.gene96791:CDS	40.0%
	GATGCAATTAATCAGCTTGG+AGG	+	chr4.3:28470202-28470221	MS.gene96791:CDS	40.0%
	GGTGAGAGGAAACAAAATAG+AGG	+	chr4.3:28471172-28471191	MS.gene96791:CDS	40.0%
	TAGAAGCTTGAAGATTGCTG+AGG	+	chr4.3:28470780-28470799	MS.gene96791:intron	40.0%
	TCTTCTTCTTCTTCGACAAC+GGG	+	chr4.3:28471037-28471056	MS.gene96791:CDS	40.0%
	TGAGGCTCTTGAAGTACAAA+TGG	+	chr4.3:28470798-28470817	MS.gene96791:CDS	40.0%
	TGCAGTAGAGAAATCAGTGT+TGG	+	chr4.3:28470650-28470669	MS.gene96791:CDS	40.0%
!	AGATGTGTTGATCAACCAGA+TGG	+	chr4.3:28471415-28471434	MS.gene96791:CDS	40.0%
!!	ACCTTGTTTGTTGTCAGAAC+AGG	-	chr4.3:28470519-28470538	None:intergenic	40.0%
!!	ATTACTCAGTGGTTTGGTTC+TGG	-	chr4.3:28470679-28470698	None:intergenic	40.0%
	AGATGGTACAAAGTGAGTCC+TGG	-	chr4.3:28470370-28470389	None:intergenic	45.0%
	AGCCAGAAGGAAGAACATTC+AGG	+	chr4.3:28471332-28471351	MS.gene96791:CDS	45.0%
	ATGCTAAGCCTAGGCTGAAA+TGG	+	chr4.3:28470152-28470171	MS.gene96791:CDS	45.0%
	CAGAACAGGTTTCTACCTGT+TGG	-	chr4.3:28470505-28470524	None:intergenic	45.0%
	GCAAAACCAAAGCATGCGTT+TGG	+	chr4.3:28470117-28470136	MS.gene96791:CDS	45.0%
	GTCCTGAATGTTCTTCCTTC+TGG	-	chr4.3:28471337-28471356	None:intergenic	45.0%
	TAGACTTGGCAAAAGCCAAC+AGG	+	chr4.3:28470487-28470506	MS.gene96791:CDS	45.0%
	TCATGAGTCCATTTCAGCCT+AGG	-	chr4.3:28470163-28470182	None:intergenic	45.0%
	TGAAAGCTCCGAGAGAAAAG+AGG	+	chr4.3:28471231-28471250	MS.gene96791:CDS	45.0%
	TTTCCACTGATGCTAAGCCT+AGG	+	chr4.3:28470143-28470162	MS.gene96791:CDS	45.0%
!	AATGCAAATGATGGAGGCAG+TGG	+	chr4.3:28471358-28471377	MS.gene96791:CDS	45.0%
!	ATGCAAATGATGGAGGCAGT+GGG	+	chr4.3:28471359-28471378	MS.gene96791:CDS	45.0%
!!	TGTTCTTCCTTCTGGCTCAA+TGG	-	chr4.3:28471329-28471348	None:intergenic	45.0%
	CTAATGGCCATTGAGCCAGA+AGG	+	chr4.3:28471319-28471338	MS.gene96791:CDS	50.0%
!	ATCGGTACTAATGAAGGCGC+AGG	+	chr4.3:28470994-28471013	MS.gene96791:CDS	50.0%
!	TCTGGCTCAATGGCCATTAG+TGG	-	chr4.3:28471319-28471338	None:intergenic	50.0%
!!	ATGAGGGTGATGGGAATTCC+AGG	+	chr4.3:28470349-28470368	MS.gene96791:CDS	50.0%
	CAGCCTAGGCTTAGCATCAG+TGG	-	chr4.3:28470149-28470168	None:intergenic	55.0%
!!	AAGGCGCAGGAAGCACTTGC+AGG	+	chr4.3:28471007-28471026	MS.gene96791:CDS	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.3	gene	28470109	28471564	28470109	ID=MS.gene96791
chr4.3	mRNA	28470109	28471564	28470109	ID=MS.gene96791.t1;Parent=MS.gene96791
chr4.3	exon	28470109	28470232	28470109	ID=MS.gene96791.t1.exon1;Parent=MS.gene96791.t1
chr4.3	CDS	28470109	28470232	28470109	ID=cds.MS.gene96791.t1;Parent=MS.gene96791.t1
chr4.3	exon	28470329	28470405	28470329	ID=MS.gene96791.t1.exon2;Parent=MS.gene96791.t1
chr4.3	CDS	28470329	28470405	28470329	ID=cds.MS.gene96791.t1;Parent=MS.gene96791.t1
chr4.3	exon	28470482	28470536	28470482	ID=MS.gene96791.t1.exon3;Parent=MS.gene96791.t1
chr4.3	CDS	28470482	28470536	28470482	ID=cds.MS.gene96791.t1;Parent=MS.gene96791.t1
chr4.3	exon	28470618	28470693	28470618	ID=MS.gene96791.t1.exon4;Parent=MS.gene96791.t1
chr4.3	CDS	28470618	28470693	28470618	ID=cds.MS.gene96791.t1;Parent=MS.gene96791.t1
chr4.3	exon	28470783	28470852	28470783	ID=MS.gene96791.t1.exon5;Parent=MS.gene96791.t1
chr4.3	CDS	28470783	28470852	28470783	ID=cds.MS.gene96791.t1;Parent=MS.gene96791.t1
chr4.3	exon	28470944	28471564	28470944	ID=MS.gene96791.t1.exon6;Parent=MS.gene96791.t1
chr4.3	CDS	28470944	28471564	28470944	ID=cds.MS.gene96791.t1;Parent=MS.gene96791.t1

Gene Sequence

>MS.gene96791

ATGGATCAGCAAAACCAAAGCATGCGTTTGGTTCTTTCCACTGATGCTAAGCCTAGGCTGAAATGGACTCATGAACTTCACCAAAGATTCACTGATGCAATTAATCAGCTTGGAGGTGCAGAAAGTAAGTGTGAGACAAAAAACTTACTATTTTTAGATCATAGTTTACATCATTATCTTAAGTACTAAATGTATTTTTCACACTATGTATATGTGGCAGAGGCAACACCAAAGAGTTTGATGAGGGTGATGGGAATTCCAGGACTCACTTTGTACCATCTTAAAAGTCATTTACAGGTATCATAATCTTTTTGCTACACTGAATCCAAAAACTATAAGAGTTTGAGCTTATTTGATTTTCTGGTTATTACAGAAATATAGACTTGGCAAAAGCCAACAGGTAGAAACCTGTTCTGACAACAAACAAGGTGAGTTACTGTATGACAGTAATAGAATGACTGGTAGTTTTCTGATTTGGCATAATCTTGAGTTATTGATTCATGGTGCAGATTACATAGAAATTCAAAACAGTGATGGTCAATGCAGTAGAGAAATCAGTGTTGGAAACCAGAACCAAACCACTGAGTAATAGTTAATTTGAAATTGAGCAAATATTTGAGCATTTTTTATTGATGTTTGAAGTATTTATTGATCAAATGTTTTGTGTTTACTAGAAGCTTGAAGATTGCTGAGGCTCTTGAAGTACAAATGGAAGTACAAAAGAAACTTTATGAACAAATTGAGGTAACATTACAAATTATGATCAATACTCATTCCTATCTAGGTTTCAAGTGATGATTAAGGACATGTTAATCGGTTTGAAACATGATTTCAGGTGCAGAAACATTTACAGTTTAGAATTGAAGCTCAAGGAAAGTACTTACAATCGGTACTAATGAAGGCGCAGGAAGCACTTGCAGGATATAGTTCTTCTTCTTCTTCGACAACGGGTGTAGAACATGCTAAAGCTGAACTTTCTCAGTTATTATCAATAATCAACAATGCATGTCCTAGTTCTCCAATTTCAGAACTAACAGAAACAAGAGGTTTTAGTTTAAACTCTGGTGAGAGGAAACAAAATAGAGGAACTATGTGTTCTTTAGAAAGTTCTCTTACATCATCTGAAAGCTCCGAGAGAAAAGAGGAAAAACAAACCATAAATGAGGCTGAGAACACTCCAAATTATAATAGTATTTCAGTTGAATTGCCACTAATGGCCATTGAGCCAGAAGGAAGAACATTCAGGACTAATGCAAATGATGGAGGCAGTGGGAGAAAGAGAAGTGCAACTATTGATTTTGATGGTAGATGTGTTGATCAACCAGATGGAAAAATATGTGGCAAAAAACTGAGGAAATCGGAGTTTTCACAAATGCTTGACTTGAACAGCAAGTATGAGAGAGACATTGACTCAAGTTCATTAGAAATAGATTTAAATTGCAGTTCAAGCTTTTAG

Protein sequence

>MS.gene96791.t1

MDQQNQSMRLVLSTDAKPRLKWTHELHQRFTDAINQLGGAEKATPKSLMRVMGIPGLTLYHLKSHLQKYRLGKSQQVETCSDNKQDYIEIQNSDGQCSREISVGNQNQTTESLKIAEALEVQMEVQKKLYEQIEVQKHLQFRIEAQGKYLQSVLMKAQEALAGYSSSSSSTTGVEHAKAELSQLLSIINNACPSSPISELTETRGFSLNSGERKQNRGTMCSLESSLTSSESSERKEEKQTINEAENTPNYNSISVELPLMAIEPEGRTFRTNANDGGSGRKRSATIDFDGRCVDQPDGKICGKKLRKSEFSQMLDLNSKYERDIDSSSLEIDLNCSSSF