Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680031019.01.T01 | GAU38629.1 | 86.709 | 474 | 31 | 3 | 1 | 472 | 1 | 444 | 0 | 833 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680031019.01.T01 | Q4V398 | 66.815 | 449 | 118 | 3 | 16 | 463 | 10 | 428 | 0 | 635 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680031019.01.T01 | A0A2Z6P4M0 | 86.709 | 474 | 31 | 3 | 1 | 472 | 1 | 444 | 0.0 | 833 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048202.01 | MsG0680031019.01 | 0.877075 | 8.404605e-69 | 4.170723e-65 |
| MsG0080048887.01 | MsG0680031019.01 | -0.805890 | 1.072838e-49 | 5.742284e-47 |
| MsG0080048918.01 | MsG0680031019.01 | -0.826134 | 3.203851e-54 | 2.978808e-51 |
| MsG0080048919.01 | MsG0680031019.01 | -0.813364 | 2.657733e-51 | 1.732167e-48 |
| MsG0080049023.01 | MsG0680031019.01 | -0.813994 | 1.930778e-51 | 1.279996e-48 |
| MsG0080049066.01 | MsG0680031019.01 | -0.811994 | 5.297972e-51 | 3.328276e-48 |
| MsG0180000763.01 | MsG0680031019.01 | 0.828785 | 7.410062e-55 | 7.439626e-52 |
| MsG0180001137.01 | MsG0680031019.01 | -0.816011 | 6.889653e-52 | 4.825301e-49 |
| MsG0180002099.01 | MsG0680031019.01 | -0.809182 | 2.147536e-50 | 1.252309e-47 |
| MsG0180003351.01 | MsG0680031019.01 | -0.834189 | 3.460463e-56 | 4.075670e-53 |
| MsG0180003405.01 | MsG0680031019.01 | -0.846534 | 2.044547e-59 | 3.530211e-56 |
| MsG0180003758.01 | MsG0680031019.01 | -0.844319 | 8.137862e-59 | 1.308835e-55 |
| MsG0180004580.01 | MsG0680031019.01 | -0.808341 | 3.247466e-50 | 1.852212e-47 |
| MsG0180004581.01 | MsG0680031019.01 | -0.826025 | 3.401935e-54 | 3.153099e-51 |
| MsG0180004731.01 | MsG0680031019.01 | -0.800211 | 1.603211e-48 | 7.421982e-46 |
| MsG0180004737.01 | MsG0680031019.01 | -0.820702 | 5.964587e-53 | 4.754032e-50 |
| MsG0180004773.01 | MsG0680031019.01 | -0.822478 | 2.318978e-53 | 1.943229e-50 |
| MsG0180004787.01 | MsG0680031019.01 | -0.808666 | 2.768076e-50 | 1.592136e-47 |
| MsG0180005272.01 | MsG0680031019.01 | 0.848231 | 6.992416e-60 | 1.274560e-56 |
| MsG0180005328.01 | MsG0680031019.01 | 0.815866 | 7.423668e-52 | 5.178423e-49 |
| MsG0180005474.01 | MsG0680031019.01 | -0.823458 | 1.370354e-53 | 1.180550e-50 |
| MsG0180005666.01 | MsG0680031019.01 | -0.827720 | 1.338400e-54 | 1.302752e-51 |
| MsG0180005865.01 | MsG0680031019.01 | 0.825840 | 3.764490e-54 | 3.470978e-51 |
| MsG0180006227.01 | MsG0680031019.01 | -0.823804 | 1.137453e-53 | 9.896469e-51 |
| MsG0180006239.01 | MsG0680031019.01 | -0.808616 | 2.837535e-50 | 1.629895e-47 |
| MsG0280006381.01 | MsG0680031019.01 | -0.815402 | 9.414910e-52 | 6.484732e-49 |
| MsG0280010583.01 | MsG0680031019.01 | -0.818279 | 2.129203e-52 | 1.586764e-49 |
| MsG0280010584.01 | MsG0680031019.01 | -0.810946 | 8.951766e-51 | 5.470258e-48 |
| MsG0280011281.01 | MsG0680031019.01 | -0.848083 | 7.682440e-60 | 1.393517e-56 |
| MsG0280011389.01 | MsG0680031019.01 | -0.802241 | 6.159326e-49 | 3.002036e-46 |
| MsG0280011475.01 | MsG0680031019.01 | -0.804039 | 2.615316e-49 | 1.334755e-46 |
| MsG0380013843.01 | MsG0680031019.01 | 0.810910 | 9.110573e-51 | 5.561738e-48 |
| MsG0380014231.01 | MsG0680031019.01 | -0.813732 | 2.205316e-51 | 1.451717e-48 |
| MsG0380014639.01 | MsG0680031019.01 | -0.854980 | 8.574676e-62 | 1.949658e-58 |
| MsG0380014642.01 | MsG0680031019.01 | -0.833767 | 4.414619e-56 | 5.134478e-53 |
| MsG0680031019.01 | MsG0680031204.01 | -0.801228 | 9.942630e-49 | 4.723125e-46 |
| MsG0680031019.01 | MsG0680031449.01 | -0.827404 | 1.594491e-54 | 1.537943e-51 |
| MsG0680031019.01 | MsG0680031686.01 | 0.835567 | 1.556487e-56 | 1.910646e-53 |
| MsG0680031019.01 | MsG0680032416.01 | -0.813866 | 2.060951e-51 | 1.361576e-48 |
| MsG0680031019.01 | MsG0680035584.01 | -0.828283 | 9.796251e-55 | 9.693030e-52 |
| MsG0680031019.01 | MsG0780035993.01 | 0.801338 | 9.439340e-49 | 4.496539e-46 |
| MsG0680031019.01 | MsG0780036843.01 | 0.824469 | 7.938867e-54 | 7.037777e-51 |
| MsG0680031019.01 | MsG0780037458.01 | -0.804644 | 1.956891e-49 | 1.014340e-46 |
| MsG0680031019.01 | MsG0780039287.01 | -0.808643 | 2.799545e-50 | 1.609248e-47 |
| MsG0680031019.01 | MsG0780039838.01 | -0.815445 | 9.213586e-52 | 6.353642e-49 |
| MsG0680031019.01 | MsG0780039839.01 | -0.818599 | 1.801833e-52 | 1.354704e-49 |
| MsG0680031019.01 | MsG0780040154.01 | -0.821288 | 4.371893e-53 | 3.541931e-50 |
| MsG0680031019.01 | MsG0780040167.01 | -0.825776 | 3.897652e-54 | 3.587228e-51 |
| MsG0680031019.01 | MsG0780040847.01 | 0.811036 | 8.558543e-51 | 5.242152e-48 |
| MsG0680031019.01 | MsG0780040892.01 | -0.817592 | 3.043998e-52 | 2.226146e-49 |
| MsG0680031019.01 | MsG0780041436.01 | 0.815152 | 1.070203e-51 | 7.320513e-49 |
| MsG0680031019.01 | MsG0880041835.01 | -0.805325 | 1.409523e-49 | 7.435532e-47 |
| MsG0680031019.01 | MsG0880043550.01 | 0.803694 | 3.084749e-49 | 1.560394e-46 |
| MsG0680031019.01 | MsG0880043786.01 | 0.844410 | 7.690450e-59 | 1.240434e-55 |
| MsG0680031019.01 | MsG0880044387.01 | -0.802855 | 4.601740e-49 | 2.278261e-46 |
| MsG0680031019.01 | MsG0880045703.01 | -0.802166 | 6.381985e-49 | 3.104641e-46 |
| MsG0680031019.01 | MsG0880046010.01 | -0.860409 | 2.108329e-63 | 5.756965e-60 |
| MsG0680031019.01 | MsG0880046341.01 | -0.830922 | 2.235243e-55 | 2.388908e-52 |
| MsG0480018463.01 | MsG0680031019.01 | -0.800549 | 1.368255e-48 | 6.388816e-46 |
| MsG0480019171.01 | MsG0680031019.01 | 0.830215 | 3.329203e-55 | 3.485181e-52 |
| MsG0480019304.01 | MsG0680031019.01 | 0.832012 | 1.204754e-55 | 1.329821e-52 |
| MsG0480020269.01 | MsG0680031019.01 | -0.808476 | 3.040373e-50 | 1.740176e-47 |
| MsG0480021169.01 | MsG0680031019.01 | -0.807618 | 4.629466e-50 | 2.590546e-47 |
| MsG0480021967.01 | MsG0680031019.01 | -0.819958 | 8.833226e-53 | 6.897250e-50 |
| MsG0480022655.01 | MsG0680031019.01 | 0.803002 | 4.290712e-49 | 2.132108e-46 |
| MsG0480023152.01 | MsG0680031019.01 | -0.803420 | 3.515967e-49 | 1.766047e-46 |
| MsG0480023173.01 | MsG0680031019.01 | -0.820839 | 5.546744e-53 | 4.438212e-50 |
| MsG0480023211.01 | MsG0680031019.01 | -0.814700 | 1.348252e-51 | 9.110765e-49 |
| MsG0480023244.01 | MsG0680031019.01 | -0.808888 | 2.482656e-50 | 1.436283e-47 |
| MsG0480023695.01 | MsG0680031019.01 | -0.823428 | 1.392476e-53 | 1.198568e-50 |
| MsG0480023705.01 | MsG0680031019.01 | -0.801505 | 8.722110e-49 | 4.172490e-46 |
| MsG0480023851.01 | MsG0680031019.01 | -0.813130 | 2.991155e-51 | 1.936905e-48 |
| MsG0580024398.01 | MsG0680031019.01 | 0.854144 | 1.496673e-61 | 3.311020e-58 |
| MsG0580024442.01 | MsG0680031019.01 | -0.815467 | 9.109383e-52 | 6.285789e-49 |
| MsG0580025105.01 | MsG0680031019.01 | -0.811787 | 5.879934e-51 | 3.673351e-48 |
| MsG0580025486.01 | MsG0680031019.01 | -0.800802 | 1.214842e-48 | 5.708941e-46 |
| MsG0380017812.01 | MsG0680031019.01 | -0.821678 | 3.552663e-53 | 2.909870e-50 |
| MsG0380017928.01 | MsG0680031019.01 | -0.806007 | 1.013941e-49 | 5.443438e-47 |
| MsG0480018201.01 | MsG0680031019.01 | -0.819045 | 1.427016e-52 | 1.086298e-49 |
| MsG0480018202.01 | MsG0680031019.01 | -0.835950 | 1.245263e-56 | 1.546252e-53 |
| MsG0480018203.01 | MsG0680031019.01 | -0.831453 | 1.654859e-55 | 1.796710e-52 |
| MsG0580026362.01 | MsG0680031019.01 | -0.805319 | 1.413728e-49 | 7.456514e-47 |
| MsG0580027276.01 | MsG0680031019.01 | -0.831654 | 1.476624e-55 | 1.612711e-52 |
| MsG0580027797.01 | MsG0680031019.01 | 0.834397 | 3.069728e-56 | 3.638460e-53 |
| MsG0580028159.01 | MsG0680031019.01 | -0.802290 | 6.017564e-49 | 2.936702e-46 |
| MsG0680030296.01 | MsG0680031019.01 | 0.814555 | 1.451259e-51 | 9.769029e-49 |
| MsG0280007017.01 | MsG0680031019.01 | -0.812498 | 4.112898e-51 | 2.619254e-48 |
| MsG0280007201.01 | MsG0680031019.01 | 0.800037 | 1.739365e-48 | 8.016782e-46 |
| MsG0280007505.01 | MsG0680031019.01 | 0.822044 | 2.923148e-53 | 2.419211e-50 |
| MsG0280007786.01 | MsG0680031019.01 | 0.807409 | 5.125597e-50 | 2.852840e-47 |
| MsG0280009079.01 | MsG0680031019.01 | -0.812499 | 4.111118e-51 | 2.618209e-48 |
| MsG0280009094.01 | MsG0680031019.01 | -0.809526 | 1.811688e-50 | 1.066183e-47 |
| MsG0280009287.01 | MsG0680031019.01 | -0.803840 | 2.876664e-49 | 1.460650e-46 |
| MsG0280009526.01 | MsG0680031019.01 | 0.820332 | 7.254166e-53 | 5.722805e-50 |
| MsG0280010149.01 | MsG0680031019.01 | -0.800533 | 1.378648e-48 | 6.434689e-46 |
| MsG0280010240.01 | MsG0680031019.01 | 0.833349 | 5.614155e-56 | 6.448624e-53 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680031019.01.T01 | MTR_6g016015 | 89.873 | 474 | 18 | 2 | 1 | 472 | 1 | 446 | 0.0 | 864 |
| MsG0680031019.01.T01 | MTR_4g110030 | 72.398 | 442 | 89 | 3 | 44 | 480 | 43 | 456 | 0.0 | 658 |
| MsG0680031019.01.T01 | MTR_2g059350 | 68.817 | 465 | 105 | 4 | 23 | 480 | 24 | 455 | 0.0 | 651 |
| MsG0680031019.01.T01 | MTR_4g082310 | 54.000 | 450 | 177 | 3 | 23 | 472 | 8 | 427 | 9.25e-174 | 498 |
| MsG0680031019.01.T01 | MTR_5g042200 | 53.653 | 438 | 164 | 4 | 43 | 472 | 9 | 415 | 6.44e-172 | 493 |
| MsG0680031019.01.T01 | MTR_5g064620 | 48.747 | 359 | 155 | 2 | 112 | 470 | 110 | 439 | 2.07e-113 | 345 |
| MsG0680031019.01.T01 | MTR_3g099480 | 47.765 | 358 | 155 | 3 | 113 | 470 | 140 | 465 | 4.59e-111 | 339 |
| MsG0680031019.01.T01 | MTR_4g125460 | 46.176 | 353 | 156 | 5 | 112 | 463 | 88 | 407 | 2.48e-110 | 335 |
| MsG0680031019.01.T01 | MTR_4g125460 | 46.176 | 353 | 156 | 5 | 112 | 463 | 227 | 546 | 4.23e-109 | 337 |
| MsG0680031019.01.T01 | MTR_4g019210 | 47.354 | 359 | 143 | 5 | 112 | 463 | 231 | 550 | 1.43e-106 | 331 |
| MsG0680031019.01.T01 | MTR_3g096020 | 44.538 | 357 | 164 | 3 | 108 | 463 | 184 | 507 | 7.66e-104 | 322 |
| MsG0680031019.01.T01 | MTR_5g081690 | 45.014 | 351 | 159 | 5 | 114 | 463 | 122 | 439 | 6.92e-103 | 317 |
| MsG0680031019.01.T01 | MTR_3g115220 | 42.493 | 353 | 169 | 5 | 112 | 463 | 110 | 429 | 7.23e-84 | 270 |
| MsG0680031019.01.T01 | MTR_4g100810 | 41.783 | 359 | 175 | 6 | 106 | 463 | 101 | 426 | 4.11e-82 | 264 |
| MsG0680031019.01.T01 | MTR_5g099010 | 40.974 | 349 | 171 | 5 | 116 | 463 | 122 | 436 | 2.17e-79 | 258 |
| MsG0680031019.01.T01 | MTR_5g012770 | 43.175 | 359 | 159 | 8 | 106 | 463 | 117 | 431 | 7.18e-79 | 255 |
| MsG0680031019.01.T01 | MTR_3g086570 | 37.466 | 363 | 189 | 5 | 112 | 463 | 149 | 484 | 1.18e-75 | 248 |
| MsG0680031019.01.T01 | MTR_2g016470 | 36.776 | 397 | 191 | 9 | 102 | 463 | 178 | 549 | 1.98e-71 | 238 |
| MsG0680031019.01.T01 | MTR_3g100310 | 34.694 | 392 | 199 | 7 | 104 | 463 | 88 | 454 | 2.26e-71 | 235 |
| MsG0680031019.01.T01 | MTR_1g031590 | 35.695 | 367 | 192 | 6 | 112 | 465 | 148 | 483 | 2.82e-70 | 233 |
| MsG0680031019.01.T01 | MTR_5g032100 | 34.545 | 385 | 200 | 6 | 107 | 463 | 80 | 440 | 2.92e-70 | 232 |
| MsG0680031019.01.T01 | MTR_4g084570 | 35.422 | 367 | 193 | 6 | 112 | 465 | 149 | 484 | 6.99e-70 | 233 |
| MsG0680031019.01.T01 | MTR_3g005340 | 35.714 | 378 | 199 | 7 | 101 | 465 | 135 | 481 | 4.47e-68 | 228 |
| MsG0680031019.01.T01 | MTR_5g059260 | 35.068 | 365 | 193 | 6 | 114 | 465 | 158 | 491 | 2.50e-67 | 226 |
| MsG0680031019.01.T01 | MTR_1g102030 | 37.105 | 380 | 194 | 9 | 96 | 463 | 72 | 418 | 1.40e-65 | 220 |
| MsG0680031019.01.T01 | MTR_3g026650 | 35.437 | 412 | 210 | 9 | 60 | 464 | 131 | 493 | 3.09e-62 | 212 |
| MsG0680031019.01.T01 | MTR_4g132590 | 35.309 | 388 | 189 | 8 | 113 | 463 | 65 | 427 | 3.29e-60 | 205 |
| MsG0680031019.01.T01 | MTR_3g026650 | 35.222 | 406 | 207 | 9 | 60 | 458 | 131 | 487 | 4.70e-60 | 205 |
| MsG0680031019.01.T01 | MTR_4g132590 | 35.309 | 388 | 189 | 8 | 113 | 463 | 164 | 526 | 3.32e-59 | 205 |
| MsG0680031019.01.T01 | MTR_3g086570 | 36.013 | 311 | 161 | 5 | 112 | 411 | 149 | 432 | 4.73e-59 | 201 |
| MsG0680031019.01.T01 | MTR_7g064210 | 58.491 | 159 | 56 | 2 | 264 | 413 | 31 | 188 | 3.69e-58 | 198 |
| MsG0680031019.01.T01 | MTR_4g023030 | 34.807 | 362 | 179 | 7 | 116 | 464 | 236 | 553 | 6.65e-58 | 202 |
| MsG0680031019.01.T01 | MTR_4g010990 | 32.603 | 365 | 199 | 8 | 112 | 472 | 74 | 395 | 6.45e-53 | 184 |
| MsG0680031019.01.T01 | MTR_1g101990 | 42.857 | 217 | 119 | 3 | 249 | 463 | 1 | 214 | 3.30e-46 | 163 |
| MsG0680031019.01.T01 | MTR_4g010990 | 31.232 | 349 | 193 | 8 | 128 | 472 | 1 | 306 | 4.47e-45 | 161 |
| MsG0680031019.01.T01 | MTR_3g092590 | 29.238 | 407 | 223 | 11 | 47 | 421 | 9 | 382 | 6.77e-40 | 152 |
| MsG0680031019.01.T01 | MTR_3g092590 | 30.266 | 413 | 214 | 12 | 51 | 421 | 2 | 382 | 3.96e-39 | 150 |
| MsG0680031019.01.T01 | MTR_7g017330 | 28.829 | 333 | 187 | 8 | 107 | 422 | 92 | 391 | 1.18e-35 | 140 |
| MsG0680031019.01.T01 | MTR_3g026650 | 34.076 | 314 | 151 | 9 | 60 | 366 | 131 | 395 | 2.59e-35 | 136 |
| MsG0680031019.01.T01 | MTR_1g007390 | 27.603 | 413 | 228 | 12 | 47 | 421 | 9 | 388 | 2.45e-31 | 128 |
| MsG0680031019.01.T01 | MTR_1g101985 | 52.174 | 92 | 43 | 1 | 96 | 187 | 72 | 162 | 1.04e-23 | 98.2 |
| MsG0680031019.01.T01 | MTR_6g046230 | 75.510 | 49 | 12 | 0 | 241 | 289 | 93 | 141 | 8.23e-17 | 77.4 |
| MsG0680031019.01.T01 | MTR_1g052225 | 52.778 | 72 | 7 | 1 | 110 | 154 | 18 | 89 | 3.37e-14 | 69.7 |
| MsG0680031019.01.T01 | MTR_1g052225 | 64.706 | 51 | 18 | 0 | 253 | 303 | 82 | 132 | 4.18e-13 | 66.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680031019.01.T01 | AT5G15740 | 66.815 | 449 | 118 | 3 | 16 | 463 | 10 | 428 | 0.0 | 635 |
| MsG0680031019.01.T01 | AT3G02250 | 66.592 | 449 | 119 | 3 | 16 | 463 | 10 | 428 | 0.0 | 625 |
| MsG0680031019.01.T01 | AT1G14020 | 55.991 | 434 | 156 | 3 | 39 | 472 | 23 | 421 | 6.80e-176 | 503 |
| MsG0680031019.01.T01 | AT2G03280 | 52.055 | 438 | 161 | 5 | 39 | 472 | 26 | 418 | 1.49e-161 | 466 |
| MsG0680031019.01.T01 | AT2G03280 | 49.032 | 465 | 161 | 6 | 39 | 472 | 26 | 445 | 1.78e-155 | 452 |
| MsG0680031019.01.T01 | AT5G64600 | 45.730 | 363 | 151 | 4 | 108 | 463 | 112 | 435 | 9.31e-108 | 330 |
| MsG0680031019.01.T01 | AT1G22460 | 46.307 | 352 | 157 | 2 | 112 | 463 | 159 | 478 | 3.66e-107 | 330 |
| MsG0680031019.01.T01 | AT2G37980 | 47.592 | 353 | 151 | 4 | 112 | 463 | 225 | 544 | 1.74e-106 | 330 |
| MsG0680031019.01.T01 | AT3G54100 | 47.025 | 353 | 153 | 4 | 112 | 463 | 221 | 540 | 1.48e-105 | 328 |
| MsG0680031019.01.T01 | AT5G35570 | 46.307 | 352 | 153 | 5 | 114 | 463 | 252 | 569 | 1.63e-105 | 328 |
| MsG0680031019.01.T01 | AT5G01100 | 45.628 | 366 | 162 | 6 | 102 | 463 | 202 | 534 | 2.59e-100 | 314 |
| MsG0680031019.01.T01 | AT1G76270 | 42.577 | 357 | 170 | 5 | 108 | 463 | 101 | 423 | 2.99e-86 | 276 |
| MsG0680031019.01.T01 | AT1G20550 | 40.896 | 357 | 176 | 5 | 108 | 463 | 104 | 426 | 9.29e-85 | 272 |
| MsG0680031019.01.T01 | AT4G38390 | 41.643 | 353 | 173 | 4 | 112 | 463 | 122 | 442 | 1.09e-84 | 271 |
| MsG0680031019.01.T01 | AT3G26370 | 38.108 | 370 | 189 | 6 | 105 | 463 | 152 | 492 | 7.73e-78 | 253 |
| MsG0680031019.01.T01 | AT4G16650 | 41.144 | 367 | 182 | 7 | 105 | 470 | 114 | 447 | 1.22e-75 | 248 |
| MsG0680031019.01.T01 | AT4G16650 | 41.144 | 367 | 182 | 7 | 105 | 470 | 114 | 447 | 1.22e-75 | 248 |
| MsG0680031019.01.T01 | AT1G38065 | 35.606 | 396 | 204 | 8 | 84 | 465 | 12 | 370 | 6.93e-75 | 243 |
| MsG0680031019.01.T01 | AT4G24530 | 36.031 | 383 | 187 | 7 | 112 | 463 | 100 | 455 | 1.46e-74 | 244 |
| MsG0680031019.01.T01 | AT1G38065 | 36.512 | 367 | 187 | 7 | 113 | 465 | 26 | 360 | 1.87e-74 | 242 |
| MsG0680031019.01.T01 | AT1G04910 | 39.335 | 361 | 183 | 7 | 106 | 463 | 83 | 410 | 5.98e-73 | 239 |
| MsG0680031019.01.T01 | AT1G38131 | 36.512 | 367 | 187 | 7 | 113 | 465 | 155 | 489 | 6.15e-73 | 241 |
| MsG0680031019.01.T01 | AT5G65470 | 34.987 | 383 | 193 | 6 | 112 | 463 | 84 | 441 | 3.63e-71 | 234 |
| MsG0680031019.01.T01 | AT2G01480 | 35.150 | 367 | 194 | 6 | 112 | 465 | 153 | 488 | 8.15e-70 | 231 |
| MsG0680031019.01.T01 | AT2G01480 | 35.150 | 367 | 194 | 6 | 112 | 465 | 153 | 488 | 5.87e-69 | 230 |
| MsG0680031019.01.T01 | AT1G14970 | 35.519 | 366 | 192 | 6 | 113 | 465 | 9 | 343 | 1.68e-68 | 225 |
| MsG0680031019.01.T01 | AT1G14970 | 35.519 | 366 | 192 | 6 | 113 | 465 | 35 | 369 | 2.77e-68 | 225 |
| MsG0680031019.01.T01 | AT1G29200 | 36.883 | 385 | 183 | 7 | 113 | 463 | 70 | 428 | 8.41e-68 | 225 |
| MsG0680031019.01.T01 | AT1G29200 | 36.883 | 385 | 183 | 7 | 113 | 463 | 70 | 428 | 8.41e-68 | 225 |
| MsG0680031019.01.T01 | AT1G35510 | 36.885 | 366 | 187 | 6 | 113 | 465 | 159 | 493 | 1.13e-67 | 227 |
| MsG0680031019.01.T01 | AT5G63390 | 37.394 | 353 | 181 | 5 | 116 | 463 | 167 | 484 | 2.14e-67 | 226 |
| MsG0680031019.01.T01 | AT1G29200 | 36.883 | 385 | 183 | 7 | 113 | 463 | 186 | 544 | 8.82e-67 | 226 |
| MsG0680031019.01.T01 | AT1G14970 | 35.519 | 366 | 192 | 6 | 113 | 465 | 155 | 489 | 9.29e-67 | 224 |
| MsG0680031019.01.T01 | AT1G62330 | 35.385 | 390 | 185 | 9 | 114 | 463 | 222 | 584 | 1.44e-66 | 226 |
| MsG0680031019.01.T01 | AT1G11990 | 37.778 | 360 | 187 | 8 | 114 | 463 | 191 | 523 | 6.85e-66 | 223 |
| MsG0680031019.01.T01 | AT1G29200 | 37.105 | 380 | 179 | 8 | 118 | 463 | 1 | 354 | 2.19e-65 | 217 |
| MsG0680031019.01.T01 | AT1G11990 | 34.257 | 397 | 187 | 8 | 114 | 463 | 176 | 545 | 1.44e-60 | 209 |
| MsG0680031019.01.T01 | AT2G44500 | 33.251 | 406 | 218 | 8 | 64 | 464 | 141 | 498 | 9.71e-58 | 201 |
| MsG0680031019.01.T01 | AT3G07900 | 33.428 | 353 | 195 | 6 | 116 | 463 | 191 | 508 | 3.96e-55 | 194 |
| MsG0680031019.01.T01 | AT1G52630 | 32.597 | 362 | 201 | 9 | 112 | 472 | 73 | 392 | 2.91e-52 | 183 |
| MsG0680031019.01.T01 | AT1G52630 | 30.925 | 346 | 196 | 9 | 128 | 472 | 1 | 304 | 1.16e-43 | 157 |
| MsG0680031019.01.T01 | AT3G03810 | 32.733 | 333 | 172 | 8 | 107 | 421 | 83 | 381 | 2.59e-43 | 162 |
| MsG0680031019.01.T01 | AT3G03810 | 32.733 | 333 | 172 | 8 | 107 | 421 | 83 | 381 | 2.59e-43 | 162 |
| MsG0680031019.01.T01 | AT3G26370 | 36.444 | 225 | 112 | 4 | 105 | 325 | 152 | 349 | 9.57e-40 | 148 |
| MsG0680031019.01.T01 | AT3G30300 | 29.664 | 327 | 177 | 10 | 106 | 415 | 96 | 386 | 6.23e-35 | 138 |
| MsG0680031019.01.T01 | AT3G30300 | 29.664 | 327 | 177 | 10 | 106 | 415 | 96 | 386 | 6.23e-35 | 138 |
| MsG0680031019.01.T01 | AT2G44500 | 31.310 | 313 | 162 | 8 | 64 | 371 | 141 | 405 | 1.32e-31 | 126 |
Find 83 sgRNAs with CRISPR-Local
Find 138 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGCTTGATAAATCGTCTTTC+TGG | 0.199112 | 6:+12945890 | MsG0680031019.01.T01:CDS |
| CCATTTGTGAAGAGTGGTTT+TGG | 0.248317 | 6:-12947015 | None:intergenic |
| TGATTGCAATTGGAGAGTTT+TGG | 0.251986 | 6:+12944963 | MsG0680031019.01.T01:CDS |
| CTATTACTACTGTGATTCTT+TGG | 0.257217 | 6:+12944924 | MsG0680031019.01.T01:CDS |
| TAAGAATAATGGTTATCTTA+TGG | 0.276020 | 6:+12945665 | MsG0680031019.01.T01:CDS |
| GCCTTCTCTGGCTGCACTCA+TGG | 0.306503 | 6:+12946523 | MsG0680031019.01.T01:CDS |
| GTCGAGCATCAGTCTTATTT+AGG | 0.312475 | 6:-12946330 | None:intergenic |
| TCAGGGATTTATAAGAATAA+TGG | 0.316108 | 6:+12945654 | MsG0680031019.01.T01:intron |
| GCAGTTTCCTCAGGTGTTAA+TGG | 0.319230 | 6:-12946739 | None:intergenic |
| CTCAAGAGAAGAGTTGAATT+AGG | 0.338975 | 6:+12946130 | MsG0680031019.01.T01:CDS |
| AAGTGATCATTGTGAGGAAA+TGG | 0.357790 | 6:+12944811 | MsG0680031019.01.T01:CDS |
| ATGGATATGTTGGCCTTCTC+TGG | 0.368715 | 6:+12946511 | MsG0680031019.01.T01:CDS |
| CTCTTCACAAATGGCTGCAT+TGG | 0.374268 | 6:+12947024 | MsG0680031019.01.T01:CDS |
| GAAATATCCGACCAACTAAT+CGG | 0.379890 | 6:-12946172 | None:intergenic |
| ATTCAAATTTATATTGCTGC+TGG | 0.386692 | 6:+12946796 | MsG0680031019.01.T01:CDS |
| TTCTTTCTACCGACCAAGTT+AGG | 0.387922 | 6:-12946868 | None:intergenic |
| ACCGTCTTTCCTCTTAAGTT+CGG | 0.391839 | 6:-12946710 | None:intergenic |
| TCTTGGTGACTGAAACAATA+AGG | 0.397969 | 6:-12945010 | None:intergenic |
| TATCTTATGGTTTCTTGCAA+TGG | 0.398386 | 6:+12945678 | MsG0680031019.01.T01:CDS |
| GTTGTTCAGTTGATTGCAAT+TGG | 0.399638 | 6:+12944953 | MsG0680031019.01.T01:CDS |
| ATTGCTGCTGGAGAAATATT+CGG | 0.400610 | 6:+12946808 | MsG0680031019.01.T01:CDS |
| CCAAAACCACTCTTCACAAA+TGG | 0.425076 | 6:+12947015 | MsG0680031019.01.T01:CDS |
| ATATTTGTTCCAACATATGA+TGG | 0.428867 | 6:+12947073 | MsG0680031019.01.T01:CDS |
| GCTTGATAAATCGTCTTTCT+GGG | 0.431715 | 6:+12945891 | MsG0680031019.01.T01:CDS |
| TCATAAATTCCGAACTTAAG+AGG | 0.440724 | 6:+12946701 | MsG0680031019.01.T01:CDS |
| AAATATCCGACCAACTAATC+GGG | 0.453315 | 6:-12946171 | None:intergenic |
| TTGGGGTCTAAAGTTGTTGA+AGG | 0.464815 | 6:+12944982 | MsG0680031019.01.T01:CDS |
| CGCAGATTCTTCCTCTCATA+CGG | 0.465185 | 6:+12946290 | MsG0680031019.01.T01:CDS |
| TTAGATACGCTTATCCTTGG+TGG | 0.469256 | 6:+12946668 | MsG0680031019.01.T01:intron |
| GCGAGCTACTTATCCTAACT+TGG | 0.472434 | 6:+12946855 | MsG0680031019.01.T01:CDS |
| CGTCTTTCTGGGCTGATCCA+AGG | 0.478224 | 6:+12945902 | MsG0680031019.01.T01:CDS |
| CTAAGATGAAGTACAAGAAA+AGG | 0.479288 | 6:-12946481 | None:intergenic |
| TGCTCTTATACTGAAAGCAC+TGG | 0.481621 | 6:+12946759 | MsG0680031019.01.T01:CDS |
| TTGTTAGATACGCTTATCCT+TGG | 0.482405 | 6:+12946665 | MsG0680031019.01.T01:intron |
| TAGATATGAGATGGATATGT+TGG | 0.483181 | 6:+12946501 | MsG0680031019.01.T01:CDS |
| AGTATAAGAGCAGTTTCCTC+AGG | 0.485547 | 6:-12946748 | None:intergenic |
| TATCAACATCGAATATGTCT+TGG | 0.488475 | 6:-12946051 | None:intergenic |
| CTTATGGTTTCTTGCAATGG+AGG | 0.488912 | 6:+12945681 | MsG0680031019.01.T01:CDS |
| TGGAAATACATCAAATCTGA+AGG | 0.489779 | 6:-12946995 | None:intergenic |
| GCCATGTTTCCATCATATGT+TGG | 0.500626 | 6:-12947082 | None:intergenic |
| ATGAAGTTGTGAAGTCTAAG+AGG | 0.505853 | 6:+12944861 | MsG0680031019.01.T01:CDS |
| GGTAAGGAAGGAAACTCTGC+TGG | 0.511062 | 6:+12946970 | MsG0680031019.01.T01:intron |
| GCCATCCACACTTTGATCCT+CGG | 0.511148 | 6:-12944896 | None:intergenic |
| CTACAGTTGAAGATGCATCT+TGG | 0.526642 | 6:-12945027 | None:intergenic |
| TCAACTCTTCTCTTGAGCCT+AGG | 0.531532 | 6:-12946124 | None:intergenic |
| TCCGAACTTAAGAGGAAAGA+CGG | 0.533451 | 6:+12946709 | MsG0680031019.01.T01:CDS |
| TGGGGTCTAAAGTTGTTGAA+GGG | 0.538257 | 6:+12944983 | MsG0680031019.01.T01:CDS |
| AAAGACGATTTATCAAGCTC+TGG | 0.540807 | 6:-12945886 | None:intergenic |
| AACATGGCTAAAGTTGTTGA+AGG | 0.548148 | 6:+12947097 | MsG0680031019.01.T01:CDS |
| ACTTCATCTTAGATATGAGA+TGG | 0.559853 | 6:+12946492 | MsG0680031019.01.T01:CDS |
| ATGCAGCCATTTGTGAAGAG+TGG | 0.560529 | 6:-12947021 | None:intergenic |
| CATTGTGAGGAAATGGAGAT+GGG | 0.560789 | 6:+12944818 | MsG0680031019.01.T01:CDS |
| TTCAACTGTAGTTGTAGCGA+AGG | 0.560997 | 6:+12945039 | MsG0680031019.01.T01:CDS |
| ATGTGATAGCAGTGAGGTTG+AGG | 0.562002 | 6:+12946546 | MsG0680031019.01.T01:CDS |
| TAGTACATCATCAAAGGATG+AGG | 0.570364 | 6:-12947177 | None:intergenic |
| CAATAAAACAATACCTTCTG+TGG | 0.571447 | 6:-12947120 | None:intergenic |
| AGGTTATCAAAAGTATCTGA+TGG | 0.572072 | 6:+12944785 | MsG0680031019.01.T01:CDS |
| GCCGAGGATCAAAGTGTGGA+TGG | 0.578147 | 6:+12944895 | MsG0680031019.01.T01:CDS |
| ACTCTTCTCTTGAGCCTAGG+TGG | 0.580749 | 6:-12946121 | None:intergenic |
| TCATTGTGAGGAAATGGAGA+TGG | 0.586151 | 6:+12944817 | MsG0680031019.01.T01:CDS |
| ATTCGGTGGAAAGAGAAGAA+TGG | 0.589294 | 6:+12946825 | MsG0680031019.01.T01:CDS |
| ATACGCTTATCCTTGGTGGA+AGG | 0.591860 | 6:+12946672 | MsG0680031019.01.T01:CDS |
| ACCTTGTGTTTCCGTATGAG+AGG | 0.596897 | 6:-12946301 | None:intergenic |
| AGAGGTTTGTTGTAAAGCCG+AGG | 0.599346 | 6:+12944879 | MsG0680031019.01.T01:CDS |
| TTGAGGAACTCACAAGAATG+AGG | 0.605181 | 6:+12946563 | MsG0680031019.01.T01:CDS |
| ACTTCTCAGATAGAACAACT+TGG | 0.623653 | 6:+12946424 | MsG0680031019.01.T01:CDS |
| AAGTTGTTGAAGGCCACAGA+AGG | 0.635026 | 6:+12947107 | MsG0680031019.01.T01:CDS |
| CTCAGATAGAACAACTTGGT+AGG | 0.635370 | 6:+12946428 | MsG0680031019.01.T01:CDS |
| TCCAACATATGATGGAAACA+TGG | 0.636574 | 6:+12947081 | MsG0680031019.01.T01:CDS |
| TCCATGAGTGCAGCCAGAGA+AGG | 0.637197 | 6:-12946524 | None:intergenic |
| TCTACTACCACAGGTAAGGA+AGG | 0.638240 | 6:+12946958 | MsG0680031019.01.T01:intron |
| AATATCCGACCAACTAATCG+GGG | 0.639424 | 6:-12946170 | None:intergenic |
| GATGCTCGACTTGCTAACAA+TGG | 0.646059 | 6:+12946343 | MsG0680031019.01.T01:CDS |
| TATTAAAGCAACTACCACCT+AGG | 0.652673 | 6:+12946107 | MsG0680031019.01.T01:CDS |
| TCAACGCATTAAAATTTACA+CGG | 0.660167 | 6:-12946396 | None:intergenic |
| TTTATGTCCATTAACACCTG+AGG | 0.668551 | 6:+12946732 | MsG0680031019.01.T01:CDS |
| TAAAGCCGAGGATCAAAGTG+TGG | 0.669923 | 6:+12944891 | MsG0680031019.01.T01:CDS |
| TCCTCTCATACGGAAACACA+AGG | 0.673092 | 6:+12946300 | MsG0680031019.01.T01:CDS |
| TTATCTGCAGATATGCGACA+TGG | 0.684272 | 6:+12945825 | MsG0680031019.01.T01:intron |
| GCTGCTGGAGAAATATTCGG+TGG | 0.702946 | 6:+12946811 | MsG0680031019.01.T01:CDS |
| ATATCCGACCAACTAATCGG+GGG | 0.718638 | 6:-12946169 | None:intergenic |
| AACTTGGTAGGAAAATAGTG+AGG | 0.728935 | 6:+12946440 | MsG0680031019.01.T01:CDS |
| TCATGGATGTGATAGCAGTG+AGG | 0.800602 | 6:+12946540 | MsG0680031019.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACAATTAAGATAACAAAAAG+AGG | - | Chr6:12946020-12946039 | None:intergenic | 20.0% |
| !! | TAAGAATAATGGTTATCTTA+TGG | + | Chr6:12945665-12945684 | MsG0680031019.01.T01:CDS | 20.0% |
| !! | TGATAAGAATAAGAATCTTA+TGG | + | Chr6:12945602-12945621 | MsG0680031019.01.T01:intron | 20.0% |
| !!! | ATCTTGTTTTTCTCAAAATT+TGG | + | Chr6:12945797-12945816 | MsG0680031019.01.T01:intron | 20.0% |
| ! | AACAATTTACTTCACTATCA+TGG | - | Chr6:12945441-12945460 | None:intergenic | 25.0% |
| ! | ATATTTGTTCCAACATATGA+TGG | + | Chr6:12947073-12947092 | MsG0680031019.01.T01:CDS | 25.0% |
| ! | ATTCAAATTTATATTGCTGC+TGG | + | Chr6:12946796-12946815 | MsG0680031019.01.T01:CDS | 25.0% |
| ! | GAAGTAAATTGTTGTCAAAT+AGG | + | Chr6:12945448-12945467 | MsG0680031019.01.T01:intron | 25.0% |
| ! | TAGATTGTGCCTTTATATTA+TGG | + | Chr6:12945398-12945417 | MsG0680031019.01.T01:intron | 25.0% |
| ! | TCAACGCATTAAAATTTACA+CGG | - | Chr6:12946399-12946418 | None:intergenic | 25.0% |
| ! | TCAGGGATTTATAAGAATAA+TGG | + | Chr6:12945654-12945673 | MsG0680031019.01.T01:intron | 25.0% |
| !! | ATTCGATAATTCTTTTCATC+AGG | + | Chr6:12945636-12945655 | MsG0680031019.01.T01:intron | 25.0% |
| !! | TATAAAGGCACAATCTAATT+CGG | - | Chr6:12945395-12945414 | None:intergenic | 25.0% |
| !! | TTACTCTTTGAATGTGATTT+TGG | + | Chr6:12946632-12946651 | MsG0680031019.01.T01:intron | 25.0% |
| !! | TTCGATAATTCTTTTCATCA+GGG | + | Chr6:12945637-12945656 | MsG0680031019.01.T01:intron | 25.0% |
| !!! | AATTTTAATGATTGCAGCAA+AGG | - | Chr6:12945757-12945776 | None:intergenic | 25.0% |
| !!! | ACAACCAAAAACTTACTTTT+TGG | - | Chr6:12945094-12945113 | None:intergenic | 25.0% |
| !!! | TGTTTGTAACCTTTTTTTTC+CGG | + | Chr6:12946934-12946953 | MsG0680031019.01.T01:intron | 25.0% |
| ACTTCATCTTAGATATGAGA+TGG | + | Chr6:12946492-12946511 | MsG0680031019.01.T01:CDS | 30.0% | |
| ATCAGGAAGATAGTCATAAA+CGG | - | Chr6:12945981-12946000 | None:intergenic | 30.0% | |
| CAATAAAACAATACCTTCTG+TGG | - | Chr6:12947123-12947142 | None:intergenic | 30.0% | |
| CTAAGATGAAGTACAAGAAA+AGG | - | Chr6:12946484-12946503 | None:intergenic | 30.0% | |
| CTATTACTACTGTGATTCTT+TGG | + | Chr6:12944924-12944943 | MsG0680031019.01.T01:CDS | 30.0% | |
| GACATTACAATCAAGAAATC+AGG | - | Chr6:12945998-12946017 | None:intergenic | 30.0% | |
| GAGAAAAACAAGATCAAACT+TGG | - | Chr6:12945791-12945810 | None:intergenic | 30.0% | |
| TAGATATGAGATGGATATGT+TGG | + | Chr6:12946501-12946520 | MsG0680031019.01.T01:CDS | 30.0% | |
| TATCAACATCGAATATGTCT+TGG | - | Chr6:12946054-12946073 | None:intergenic | 30.0% | |
| TATCTTATGGTTTCTTGCAA+TGG | + | Chr6:12945678-12945697 | MsG0680031019.01.T01:CDS | 30.0% | |
| TATTTCGTACTACGAAAAAC+AGG | + | Chr6:12946189-12946208 | MsG0680031019.01.T01:CDS | 30.0% | |
| TCATAAATTCCGAACTTAAG+AGG | + | Chr6:12946701-12946720 | MsG0680031019.01.T01:CDS | 30.0% | |
| TGGAAATACATCAAATCTGA+AGG | - | Chr6:12946998-12947017 | None:intergenic | 30.0% | |
| TGTGCCTTTATATTATGGTT+GGG | + | Chr6:12945403-12945422 | MsG0680031019.01.T01:intron | 30.0% | |
| TTACAATAGCAATCACATTG+TGG | + | Chr6:12945473-12945492 | MsG0680031019.01.T01:intron | 30.0% | |
| TTGTGCCTTTATATTATGGT+TGG | + | Chr6:12945402-12945421 | MsG0680031019.01.T01:intron | 30.0% | |
| ! | AAGACTTTTCTGCAATATCA+TGG | - | Chr6:12945357-12945376 | None:intergenic | 30.0% |
| ! | CTCAACTTTTGAATCTCAAT+AGG | - | Chr6:12946373-12946392 | None:intergenic | 30.0% |
| ! | GAAAATAGTGAGGATTTTGA+GGG | + | Chr6:12946450-12946469 | MsG0680031019.01.T01:CDS | 30.0% |
| !! | AGGTTATCAAAAGTATCTGA+TGG | + | Chr6:12944785-12944804 | MsG0680031019.01.T01:CDS | 30.0% |
| !! | GTGTAAATTTTAATGCGTTG+AGG | + | Chr6:12946398-12946417 | MsG0680031019.01.T01:CDS | 30.0% |
| !!! | ACCAAAAACTTACTTTTTGG+CGG | - | Chr6:12945091-12945110 | None:intergenic | 30.0% |
| AAAGACGATTTATCAAGCTC+TGG | - | Chr6:12945889-12945908 | None:intergenic | 35.0% | |
| AAATATCCGACCAACTAATC+GGG | - | Chr6:12946174-12946193 | None:intergenic | 35.0% | |
| AACATGGCTAAAGTTGTTGA+AGG | + | Chr6:12947097-12947116 | MsG0680031019.01.T01:CDS | 35.0% | |
| AACTTGGTAGGAAAATAGTG+AGG | + | Chr6:12946440-12946459 | MsG0680031019.01.T01:CDS | 35.0% | |
| AAGTGATCATTGTGAGGAAA+TGG | + | Chr6:12944811-12944830 | MsG0680031019.01.T01:CDS | 35.0% | |
| ACTTCTCAGATAGAACAACT+TGG | + | Chr6:12946424-12946443 | MsG0680031019.01.T01:CDS | 35.0% | |
| AGAACATTGAACCACAAACA+CGG | + | Chr6:12945156-12945175 | MsG0680031019.01.T01:intron | 35.0% | |
| AGCTTGATAAATCGTCTTTC+TGG | + | Chr6:12945890-12945909 | MsG0680031019.01.T01:CDS | 35.0% | |
| ATGAAGTTGTGAAGTCTAAG+AGG | + | Chr6:12944861-12944880 | MsG0680031019.01.T01:CDS | 35.0% | |
| ATTGCTGCTGGAGAAATATT+CGG | + | Chr6:12946808-12946827 | MsG0680031019.01.T01:CDS | 35.0% | |
| CAATAACAATGTGCAAACCT+TGG | - | Chr6:12945922-12945941 | None:intergenic | 35.0% | |
| CTCAAGAGAAGAGTTGAATT+AGG | + | Chr6:12946130-12946149 | MsG0680031019.01.T01:CDS | 35.0% | |
| GAAATATCCGACCAACTAAT+CGG | - | Chr6:12946175-12946194 | None:intergenic | 35.0% | |
| GCTTGATAAATCGTCTTTCT+GGG | + | Chr6:12945891-12945910 | MsG0680031019.01.T01:CDS | 35.0% | |
| GGTAACTAATGCTAAGTACT+TGG | - | Chr6:12945736-12945755 | None:intergenic | 35.0% | |
| GTAGTAGAACCGGAAAAAAA+AGG | - | Chr6:12946946-12946965 | None:intergenic | 35.0% | |
| GTGCCTTTATATTATGGTTG+GGG | + | Chr6:12945404-12945423 | MsG0680031019.01.T01:intron | 35.0% | |
| GTTGTTCAGTTGATTGCAAT+TGG | + | Chr6:12944953-12944972 | MsG0680031019.01.T01:CDS | 35.0% | |
| TATTAAAGCAACTACCACCT+AGG | + | Chr6:12946107-12946126 | MsG0680031019.01.T01:CDS | 35.0% | |
| TGGAAAAAGTGATCATTGTG+AGG | + | Chr6:12944805-12944824 | MsG0680031019.01.T01:CDS | 35.0% | |
| TTGTTAGATACGCTTATCCT+TGG | + | Chr6:12946665-12946684 | MsG0680031019.01.T01:intron | 35.0% | |
| TTTATGTCCATTAACACCTG+AGG | + | Chr6:12946732-12946751 | MsG0680031019.01.T01:CDS | 35.0% | |
| ! | ATTGCAATTGGAGAGTTTTG+GGG | + | Chr6:12944965-12944984 | MsG0680031019.01.T01:CDS | 35.0% |
| ! | GATTGCAATTGGAGAGTTTT+GGG | + | Chr6:12944964-12944983 | MsG0680031019.01.T01:CDS | 35.0% |
| ! | GGAAAATAGTGAGGATTTTG+AGG | + | Chr6:12946449-12946468 | MsG0680031019.01.T01:CDS | 35.0% |
| ! | TCCAACATATGATGGAAACA+TGG | + | Chr6:12947081-12947100 | MsG0680031019.01.T01:CDS | 35.0% |
| ! | TCCGCCAAAAAGTAAGTTTT+TGG | + | Chr6:12945087-12945106 | MsG0680031019.01.T01:intron | 35.0% |
| ! | TCTTGGTGACTGAAACAATA+AGG | - | Chr6:12945013-12945032 | None:intergenic | 35.0% |
| ! | TGATTGCAATTGGAGAGTTT+TGG | + | Chr6:12944963-12944982 | MsG0680031019.01.T01:CDS | 35.0% |
| !! | ATGGGATTCAATGTTTTGAG+TGG | + | Chr6:12944836-12944855 | MsG0680031019.01.T01:CDS | 35.0% |
| AATATCCGACCAACTAATCG+GGG | - | Chr6:12946173-12946192 | None:intergenic | 40.0% | |
| ACCGTCTTTCCTCTTAAGTT+CGG | - | Chr6:12946713-12946732 | None:intergenic | 40.0% | |
| AGTATAAGAGCAGTTTCCTC+AGG | - | Chr6:12946751-12946770 | None:intergenic | 40.0% | |
| CATTGTGAGGAAATGGAGAT+GGG | + | Chr6:12944818-12944837 | MsG0680031019.01.T01:CDS | 40.0% | |
| CCAAAACCACTCTTCACAAA+TGG | + | Chr6:12947015-12947034 | MsG0680031019.01.T01:CDS | 40.0% | |
| CTACAGTTGAAGATGCATCT+TGG | - | Chr6:12945030-12945049 | None:intergenic | 40.0% | |
| CTCAGATAGAACAACTTGGT+AGG | + | Chr6:12946428-12946447 | MsG0680031019.01.T01:CDS | 40.0% | |
| CTTATGGTTTCTTGCAATGG+AGG | + | Chr6:12945681-12945700 | MsG0680031019.01.T01:CDS | 40.0% | |
| CTTTATATTATGGTTGGGGC+CGG | + | Chr6:12945408-12945427 | MsG0680031019.01.T01:intron | 40.0% | |
| GCCATGTTTCCATCATATGT+TGG | - | Chr6:12947085-12947104 | None:intergenic | 40.0% | |
| GCTACTTATCCTAACTTGGT+CGG | + | Chr6:12946859-12946878 | MsG0680031019.01.T01:intron | 40.0% | |
| TCATTGTGAGGAAATGGAGA+TGG | + | Chr6:12944817-12944836 | MsG0680031019.01.T01:CDS | 40.0% | |
| TCCGAACTTAAGAGGAAAGA+CGG | + | Chr6:12946709-12946728 | MsG0680031019.01.T01:CDS | 40.0% | |
| TGCAATATCATGGATCACGA+CGG | - | Chr6:12945347-12945366 | None:intergenic | 40.0% | |
| TGGTTGAAGAGACATCAAAC+AGG | + | Chr6:12945493-12945512 | MsG0680031019.01.T01:intron | 40.0% | |
| TTAGATACGCTTATCCTTGG+TGG | + | Chr6:12946668-12946687 | MsG0680031019.01.T01:intron | 40.0% | |
| TTATCTGCAGATATGCGACA+TGG | + | Chr6:12945825-12945844 | MsG0680031019.01.T01:intron | 40.0% | |
| TTCAACTGTAGTTGTAGCGA+AGG | + | Chr6:12945039-12945058 | MsG0680031019.01.T01:CDS | 40.0% | |
| TTCTTTCTACCGACCAAGTT+AGG | - | Chr6:12946871-12946890 | None:intergenic | 40.0% | |
| TTGAGGAACTCACAAGAATG+AGG | + | Chr6:12946563-12946582 | MsG0680031019.01.T01:CDS | 40.0% | |
| ! | ATTCGGTGGAAAGAGAAGAA+TGG | + | Chr6:12946825-12946844 | MsG0680031019.01.T01:CDS | 40.0% |
| ! | CCATTTGTGAAGAGTGGTTT+TGG | - | Chr6:12947018-12947037 | None:intergenic | 40.0% |
| ! | CTTAAACAGTGTAGCACTGA+TGG | - | Chr6:12945251-12945270 | None:intergenic | 40.0% |
| ! | TGCTCTTATACTGAAAGCAC+TGG | + | Chr6:12946759-12946778 | MsG0680031019.01.T01:CDS | 40.0% |
| ! | TGGGGTCTAAAGTTGTTGAA+GGG | + | Chr6:12944983-12945002 | MsG0680031019.01.T01:CDS | 40.0% |
| ! | TTGGGGTCTAAAGTTGTTGA+AGG | + | Chr6:12944982-12945001 | MsG0680031019.01.T01:CDS | 40.0% |
| !! | ATGACTTTTTCCTTCCACCA+AGG | - | Chr6:12946685-12946704 | None:intergenic | 40.0% |
| !! | GTCGAGCATCAGTCTTATTT+AGG | - | Chr6:12946333-12946352 | None:intergenic | 40.0% |
| !!! | TGTAGCGAAGGCTAGTTTTT+CGG | + | Chr6:12945051-12945070 | MsG0680031019.01.T01:CDS | 40.0% |
| AAGTTGTTGAAGGCCACAGA+AGG | + | Chr6:12947107-12947126 | MsG0680031019.01.T01:CDS | 45.0% | |
| ACCTTGTGTTTCCGTATGAG+AGG | - | Chr6:12946304-12946323 | None:intergenic | 45.0% | |
| AGAGTTTCCTTCCTTACCTG+TGG | - | Chr6:12946968-12946987 | None:intergenic | 45.0% | |
| ATACGCTTATCCTTGGTGGA+AGG | + | Chr6:12946672-12946691 | MsG0680031019.01.T01:CDS | 45.0% | |
| ATATCCGACCAACTAATCGG+GGG | - | Chr6:12946172-12946191 | None:intergenic | 45.0% | |
| ATGCAGCCATTTGTGAAGAG+TGG | - | Chr6:12947024-12947043 | None:intergenic | 45.0% | |
| ATGTGATAGCAGTGAGGTTG+AGG | + | Chr6:12946546-12946565 | MsG0680031019.01.T01:CDS | 45.0% | |
| CGCAGATTCTTCCTCTCATA+CGG | + | Chr6:12946290-12946309 | MsG0680031019.01.T01:CDS | 45.0% | |
| CGGCCCCAACCATAATATAA+AGG | - | Chr6:12945410-12945429 | None:intergenic | 45.0% | |
| CTCTTCACAAATGGCTGCAT+TGG | + | Chr6:12947024-12947043 | MsG0680031019.01.T01:CDS | 45.0% | |
| CTTACCTGTGGTAGTAGAAC+CGG | - | Chr6:12946956-12946975 | None:intergenic | 45.0% | |
| GCAGTTTCCTCAGGTGTTAA+TGG | - | Chr6:12946742-12946761 | None:intergenic | 45.0% | |
| GCGAGCTACTTATCCTAACT+TGG | + | Chr6:12946855-12946874 | MsG0680031019.01.T01:CDS | 45.0% | |
| TAAAGCCGAGGATCAAAGTG+TGG | + | Chr6:12944891-12944910 | MsG0680031019.01.T01:CDS | 45.0% | |
| TCAACTCTTCTCTTGAGCCT+AGG | - | Chr6:12946127-12946146 | None:intergenic | 45.0% | |
| TCACTATCATGGATCACGAC+CGG | - | Chr6:12945430-12945449 | None:intergenic | 45.0% | |
| TCATGGATGTGATAGCAGTG+AGG | + | Chr6:12946540-12946559 | MsG0680031019.01.T01:CDS | 45.0% | |
| TCCTCTCATACGGAAACACA+AGG | + | Chr6:12946300-12946319 | MsG0680031019.01.T01:CDS | 45.0% | |
| TCTACTACCACAGGTAAGGA+AGG | + | Chr6:12946958-12946977 | MsG0680031019.01.T01:intron | 45.0% | |
| TGTCTATGTGTCCGTGTTTG+TGG | - | Chr6:12945170-12945189 | None:intergenic | 45.0% | |
| ! | TATGCACGAGCCTTATATCG+TGG | + | Chr6:12945314-12945333 | MsG0680031019.01.T01:intron | 45.0% |
| ! | TTTTCCGGTTCTACTACCAC+AGG | + | Chr6:12946949-12946968 | MsG0680031019.01.T01:intron | 45.0% |
| !! | AGAGGTTTGTTGTAAAGCCG+AGG | + | Chr6:12944879-12944898 | MsG0680031019.01.T01:CDS | 45.0% |
| !! | ATGGATATGTTGGCCTTCTC+TGG | + | Chr6:12946511-12946530 | MsG0680031019.01.T01:CDS | 45.0% |
| !! | GATGCTCGACTTGCTAACAA+TGG | + | Chr6:12946343-12946362 | MsG0680031019.01.T01:CDS | 45.0% |
| !! | GTGAGGATTTTGAGGGAAAG+AGG | + | Chr6:12946457-12946476 | MsG0680031019.01.T01:CDS | 45.0% |
| !!! | GAAGGCTAGTTTTTCGGCTA+AGG | + | Chr6:12945057-12945076 | MsG0680031019.01.T01:CDS | 45.0% |
| ACTCATTGCCCCCGATTAGT+TGG | + | Chr6:12946161-12946180 | MsG0680031019.01.T01:CDS | 50.0% | |
| ACTCTTCTCTTGAGCCTAGG+TGG | - | Chr6:12946124-12946143 | None:intergenic | 50.0% | |
| CGGACTGTGACCACGATATA+AGG | - | Chr6:12945327-12945346 | None:intergenic | 50.0% | |
| CGGTTCTACTACCACAGGTA+AGG | + | Chr6:12946954-12946973 | MsG0680031019.01.T01:intron | 50.0% | |
| GCCATCCACACTTTGATCCT+CGG | - | Chr6:12944899-12944918 | None:intergenic | 50.0% | |
| GCTGCTGGAGAAATATTCGG+TGG | + | Chr6:12946811-12946830 | MsG0680031019.01.T01:CDS | 50.0% | |
| GGTAAGGAAGGAAACTCTGC+TGG | + | Chr6:12946970-12946989 | MsG0680031019.01.T01:intron | 50.0% | |
| ! | ATTGCCCCCGATTAGTTGGT+CGG | + | Chr6:12946165-12946184 | MsG0680031019.01.T01:CDS | 50.0% |
| CGTCTTTCTGGGCTGATCCA+AGG | + | Chr6:12945902-12945921 | MsG0680031019.01.T01:CDS | 55.0% | |
| GCCGAGGATCAAAGTGTGGA+TGG | + | Chr6:12944895-12944914 | MsG0680031019.01.T01:CDS | 55.0% | |
| TCCATGAGTGCAGCCAGAGA+AGG | - | Chr6:12946527-12946546 | None:intergenic | 55.0% | |
| GCCTTCTCTGGCTGCACTCA+TGG | + | Chr6:12946523-12946542 | MsG0680031019.01.T01:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr6 | gene | 12944773 | 12947189 | 12944773 | ID=MsG0680031019.01;Name=MsG0680031019.01 |
| Chr6 | mRNA | 12944773 | 12947189 | 12944773 | ID=MsG0680031019.01.T01;Parent=MsG0680031019.01;Name=MsG0680031019.01.T01;_AED=0.37;_eAED=0.38;_QI=0|0|0|1|1|0.83|6|0|481 |
| Chr6 | exon | 12944773 | 12945097 | 12944773 | ID=MsG0680031019.01.T01:exon:9155;Parent=MsG0680031019.01.T01 |
| Chr6 | exon | 12945658 | 12945725 | 12945658 | ID=MsG0680031019.01.T01:exon:9156;Parent=MsG0680031019.01.T01 |
| Chr6 | exon | 12945835 | 12945923 | 12945835 | ID=MsG0680031019.01.T01:exon:9157;Parent=MsG0680031019.01.T01 |
| Chr6 | exon | 12946045 | 12946584 | 12946045 | ID=MsG0680031019.01.T01:exon:9158;Parent=MsG0680031019.01.T01 |
| Chr6 | exon | 12946672 | 12946876 | 12946672 | ID=MsG0680031019.01.T01:exon:9159;Parent=MsG0680031019.01.T01 |
| Chr6 | exon | 12946971 | 12947189 | 12946971 | ID=MsG0680031019.01.T01:exon:9160;Parent=MsG0680031019.01.T01 |
| Chr6 | CDS | 12944773 | 12945097 | 12944773 | ID=MsG0680031019.01.T01:cds;Parent=MsG0680031019.01.T01 |
| Chr6 | CDS | 12945658 | 12945725 | 12945658 | ID=MsG0680031019.01.T01:cds;Parent=MsG0680031019.01.T01 |
| Chr6 | CDS | 12945835 | 12945923 | 12945835 | ID=MsG0680031019.01.T01:cds;Parent=MsG0680031019.01.T01 |
| Chr6 | CDS | 12946045 | 12946584 | 12946045 | ID=MsG0680031019.01.T01:cds;Parent=MsG0680031019.01.T01 |
| Chr6 | CDS | 12946672 | 12946876 | 12946672 | ID=MsG0680031019.01.T01:cds;Parent=MsG0680031019.01.T01 |
| Chr6 | CDS | 12946971 | 12947189 | 12946971 | ID=MsG0680031019.01.T01:cds;Parent=MsG0680031019.01.T01 |
| Gene Sequence |
| Protein sequence |
