Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880044387.01.T01 | XP_003628540.1 | 95.946 | 148 | 5 | 1 | 1 | 148 | 1 | 147 | 3.62E-96 | 283 |
| MsG0880044387.01.T02 | XP_003628540.1 | 98.333 | 60 | 1 | 0 | 1 | 60 | 88 | 147 | 1.54E-33 | 121 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880044387.01.T01 | Q94KR7 | 88.158 | 76 | 9 | 0 | 67 | 142 | 60 | 135 | 6.91E-45 | 146 |
| MsG0880044387.01.T02 | Q94KR7 | 88.889 | 54 | 6 | 0 | 1 | 54 | 82 | 135 | 8.20E-29 | 102 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880044387.01.T01 | G7LDQ8 | 95.946 | 148 | 5 | 1 | 1 | 148 | 1 | 147 | 1.73e-96 | 283 |
| MsG0880044387.01.T02 | G7LDQ8 | 98.333 | 60 | 1 | 0 | 1 | 60 | 88 | 147 | 7.34e-34 | 121 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047967.01 | MsG0880044387.01 | 0.842918 | 1.927969e-58 | 2.967072e-55 |
| MsG0080048059.01 | MsG0880044387.01 | 0.849950 | 2.327227e-60 | 4.486330e-57 |
| MsG0080048202.01 | MsG0880044387.01 | -0.817099 | 3.930365e-52 | 2.835770e-49 |
| MsG0080048694.01 | MsG0880044387.01 | 0.850077 | 2.143683e-60 | 4.149870e-57 |
| MsG0080048695.01 | MsG0880044387.01 | 0.850068 | 2.155903e-60 | 4.172409e-57 |
| MsG0080048697.01 | MsG0880044387.01 | 0.807796 | 4.242111e-50 | 2.384927e-47 |
| MsG0080048800.01 | MsG0880044387.01 | 0.823439 | 1.384166e-53 | 1.191799e-50 |
| MsG0080048813.01 | MsG0880044387.01 | 0.822631 | 2.136679e-53 | 1.798423e-50 |
| MsG0080048887.01 | MsG0880044387.01 | 0.865583 | 5.316290e-65 | 1.738630e-61 |
| MsG0080048889.01 | MsG0880044387.01 | -0.810714 | 1.004909e-50 | 6.102364e-48 |
| MsG0080048896.01 | MsG0880044387.01 | 0.822749 | 2.005090e-53 | 1.693311e-50 |
| MsG0080048917.01 | MsG0880044387.01 | 0.840154 | 1.031277e-57 | 1.456227e-54 |
| MsG0080048918.01 | MsG0880044387.01 | 0.867707 | 1.122469e-65 | 3.956148e-62 |
| MsG0080048919.01 | MsG0880044387.01 | 0.879661 | 1.038195e-69 | 5.676320e-66 |
| MsG0080048929.01 | MsG0880044387.01 | 0.816035 | 6.804083e-52 | 4.768638e-49 |
| MsG0080048948.01 | MsG0880044387.01 | 0.820138 | 8.034863e-53 | 6.305578e-50 |
| MsG0080048978.01 | MsG0880044387.01 | 0.835473 | 1.643811e-56 | 2.012182e-53 |
| MsG0080048986.01 | MsG0880044387.01 | 0.831658 | 1.473047e-55 | 1.609037e-52 |
| MsG0080048987.01 | MsG0880044387.01 | 0.809311 | 2.015018e-50 | 1.179058e-47 |
| MsG0080048992.01 | MsG0880044387.01 | 0.808837 | 2.544735e-50 | 1.470233e-47 |
| MsG0080049015.01 | MsG0880044387.01 | 0.807749 | 4.341839e-50 | 2.438009e-47 |
| MsG0080049018.01 | MsG0880044387.01 | 0.810975 | 8.821084e-51 | 5.394624e-48 |
| MsG0080049019.01 | MsG0880044387.01 | 0.845325 | 4.357972e-59 | 7.236488e-56 |
| MsG0080049023.01 | MsG0880044387.01 | 0.857853 | 1.230047e-62 | 3.078367e-59 |
| MsG0080049024.01 | MsG0880044387.01 | 0.868524 | 6.124906e-66 | 2.222644e-62 |
| MsG0080049038.01 | MsG0880044387.01 | 0.844790 | 6.079402e-59 | 9.924871e-56 |
| MsG0080049053.01 | MsG0880044387.01 | 0.822551 | 2.229679e-53 | 1.872390e-50 |
| MsG0080049062.01 | MsG0880044387.01 | 0.843677 | 1.209283e-58 | 1.906420e-55 |
| MsG0080049066.01 | MsG0880044387.01 | 0.906643 | 1.191949e-80 | 2.038591e-76 |
| MsG0080049072.01 | MsG0880044387.01 | 0.808110 | 3.638138e-50 | 2.062288e-47 |
| MsG0080049076.01 | MsG0880044387.01 | 0.813429 | 2.570812e-51 | 1.678461e-48 |
| MsG0080049133.01 | MsG0880044387.01 | 0.850785 | 1.356818e-60 | 2.688052e-57 |
| MsG0180000193.01 | MsG0880044387.01 | 0.829737 | 4.355160e-55 | 4.496952e-52 |
| MsG0180000194.01 | MsG0880044387.01 | 0.810445 | 1.148401e-50 | 6.923617e-48 |
| MsG0180000306.01 | MsG0880044387.01 | 0.815762 | 7.827754e-52 | 5.445372e-49 |
| MsG0180000322.01 | MsG0880044387.01 | 0.832603 | 8.602918e-56 | 9.662821e-53 |
| MsG0180000325.01 | MsG0880044387.01 | 0.842755 | 2.130652e-58 | 3.262304e-55 |
| MsG0180000352.01 | MsG0880044387.01 | 0.836947 | 6.941159e-57 | 8.882530e-54 |
| MsG0180000367.01 | MsG0880044387.01 | -0.825177 | 5.403965e-54 | 4.889499e-51 |
| MsG0180000417.01 | MsG0880044387.01 | 0.841079 | 5.904999e-58 | 8.578763e-55 |
| MsG0180000423.01 | MsG0880044387.01 | 0.862271 | 5.704362e-64 | 1.660778e-60 |
| MsG0180000467.01 | MsG0880044387.01 | 0.911270 | 7.355323e-83 | 1.563000e-78 |
| MsG0180000541.01 | MsG0880044387.01 | 0.811665 | 6.250426e-51 | 3.891960e-48 |
| MsG0180000551.01 | MsG0880044387.01 | -0.805742 | 1.152279e-49 | 6.144402e-47 |
| MsG0180000583.01 | MsG0880044387.01 | -0.839688 | 1.364720e-57 | 1.898994e-54 |
| MsG0180000708.01 | MsG0880044387.01 | 0.802736 | 4.869145e-49 | 2.403414e-46 |
| MsG0180000719.01 | MsG0880044387.01 | 0.845410 | 4.131438e-59 | 6.878993e-56 |
| MsG0180000763.01 | MsG0880044387.01 | -0.812401 | 4.318358e-51 | 2.743168e-48 |
| MsG0180000846.01 | MsG0880044387.01 | 0.812623 | 3.862471e-51 | 2.467831e-48 |
| MsG0180001054.01 | MsG0880044387.01 | 0.851923 | 6.466003e-61 | 1.328978e-57 |
| MsG0180001072.01 | MsG0880044387.01 | 0.848902 | 4.559057e-60 | 8.494130e-57 |
| MsG0180001079.01 | MsG0880044387.01 | -0.801863 | 7.367770e-49 | 3.556736e-46 |
| MsG0180001113.01 | MsG0880044387.01 | 0.826269 | 2.975793e-54 | 2.777417e-51 |
| MsG0180001137.01 | MsG0880044387.01 | 0.900842 | 4.887819e-78 | 6.428714e-74 |
| MsG0180001264.01 | MsG0880044387.01 | -0.813916 | 2.008345e-51 | 1.328625e-48 |
| MsG0180001484.01 | MsG0880044387.01 | 0.841422 | 4.798720e-58 | 7.048002e-55 |
| MsG0180001614.01 | MsG0880044387.01 | 0.858967 | 5.724474e-63 | 1.487573e-59 |
| MsG0180001615.01 | MsG0880044387.01 | 0.807042 | 6.131366e-50 | 3.380080e-47 |
| MsG0180001664.01 | MsG0880044387.01 | 0.811157 | 8.056343e-51 | 4.949974e-48 |
| MsG0180001827.01 | MsG0880044387.01 | 0.838213 | 3.287165e-57 | 4.372438e-54 |
| MsG0180001861.01 | MsG0880044387.01 | 0.818118 | 2.315792e-52 | 1.718229e-49 |
| MsG0180001925.01 | MsG0880044387.01 | 0.860967 | 1.427140e-63 | 3.972554e-60 |
| MsG0180002021.01 | MsG0880044387.01 | 0.859839 | 3.133280e-63 | 8.390674e-60 |
| MsG0180002099.01 | MsG0880044387.01 | 0.894434 | 2.476276e-75 | 2.461350e-71 |
| MsG0180002214.01 | MsG0880044387.01 | 0.817985 | 2.482557e-52 | 1.835144e-49 |
| MsG0180002425.01 | MsG0880044387.01 | 0.845984 | 2.888121e-59 | 4.899117e-56 |
| MsG0180002426.01 | MsG0880044387.01 | 0.804194 | 2.428643e-49 | 1.244351e-46 |
| MsG0180002454.01 | MsG0880044387.01 | 0.830079 | 3.593536e-55 | 3.746725e-52 |
| MsG0880044312.01 | MsG0880044387.01 | 0.801531 | 8.617382e-49 | 4.125003e-46 |
| MsG0880044339.01 | MsG0880044387.01 | 0.873273 | 1.670142e-67 | 7.204642e-64 |
| MsG0880044352.01 | MsG0880044387.01 | 0.812387 | 4.350761e-51 | 2.762520e-48 |
| MsG0880044387.01 | MsG0880044545.01 | 0.832384 | 9.749088e-56 | 1.087904e-52 |
| MsG0880044387.01 | MsG0880044548.01 | 0.821361 | 4.205872e-53 | 3.414291e-50 |
| MsG0880044387.01 | MsG0880044595.01 | 0.806156 | 9.433141e-50 | 5.083421e-47 |
| MsG0880044387.01 | MsG0880044688.01 | -0.823487 | 1.348956e-53 | 1.163123e-50 |
| MsG0880044387.01 | MsG0880044968.01 | 0.865370 | 6.202042e-65 | 2.012928e-61 |
| MsG0880044387.01 | MsG0880045063.01 | 0.884848 | 1.350377e-71 | 9.051699e-68 |
| MsG0880044387.01 | MsG0880045188.01 | 0.848359 | 6.445972e-60 | 1.179894e-56 |
| MsG0880044387.01 | MsG0880045274.01 | 0.840403 | 8.882080e-58 | 1.263866e-54 |
| MsG0880044387.01 | MsG0880045321.01 | 0.852951 | 3.295581e-61 | 7.004396e-58 |
| MsG0880044387.01 | MsG0880045324.01 | 0.809257 | 2.069625e-50 | 1.209275e-47 |
| MsG0880044387.01 | MsG0880045369.01 | 0.875829 | 2.263211e-68 | 1.072526e-64 |
| MsG0880044387.01 | MsG0880045385.01 | 0.881085 | 3.217990e-70 | 1.859290e-66 |
| MsG0880044387.01 | MsG0880045413.01 | 0.884394 | 1.990226e-71 | 1.310663e-67 |
| MsG0880044387.01 | MsG0880045414.01 | 0.855744 | 5.135529e-62 | 1.197795e-58 |
| MsG0880044387.01 | MsG0880045457.01 | 0.830391 | 3.014693e-55 | 3.171972e-52 |
| MsG0880044387.01 | MsG0880045458.01 | -0.818548 | 1.850374e-52 | 1.389331e-49 |
| MsG0880044387.01 | MsG0880045697.01 | 0.805011 | 1.640130e-49 | 8.582327e-47 |
| MsG0880044387.01 | MsG0880045698.01 | 0.849055 | 4.132294e-60 | 7.737758e-57 |
| MsG0880044387.01 | MsG0880045703.01 | 0.881486 | 2.305684e-70 | 1.353412e-66 |
| MsG0880044387.01 | MsG0880045755.01 | 0.804570 | 2.027441e-49 | 1.048906e-46 |
| MsG0880044387.01 | MsG0880045778.01 | 0.868853 | 4.795168e-66 | 1.761092e-62 |
| MsG0880044387.01 | MsG0880045968.01 | 0.884717 | 1.510742e-71 | 1.007602e-67 |
| MsG0880044387.01 | MsG0880046010.01 | 0.887862 | 9.827489e-73 | 7.433820e-69 |
| MsG0880044387.01 | MsG0880046040.01 | 0.866539 | 2.647951e-65 | 8.956904e-62 |
| MsG0880044387.01 | MsG0880046095.01 | -0.808084 | 3.684146e-50 | 2.086986e-47 |
| MsG0880044387.01 | MsG0880046104.01 | 0.803056 | 4.181793e-49 | 2.080852e-46 |
| MsG0880044387.01 | MsG0880046105.01 | 0.863087 | 3.197022e-64 | 9.574974e-61 |
| MsG0880044387.01 | MsG0880046149.01 | 0.826357 | 2.835732e-54 | 2.653363e-51 |
| MsG0880044387.01 | MsG0880046150.01 | 0.836664 | 8.193884e-57 | 1.039571e-53 |
| MsG0880044387.01 | MsG0880046151.01 | 0.887253 | 1.677814e-72 | 1.238597e-68 |
| MsG0880044387.01 | MsG0880046167.01 | 0.875277 | 3.497203e-68 | 1.623417e-64 |
| MsG0880044387.01 | MsG0880046174.01 | 0.849002 | 4.274556e-60 | 7.990784e-57 |
| MsG0880044387.01 | MsG0880046189.01 | 0.846141 | 2.616908e-59 | 4.460696e-56 |
| MsG0880044387.01 | MsG0880046212.01 | -0.801704 | 7.943034e-49 | 3.818716e-46 |
| MsG0880044387.01 | MsG0880046219.01 | 0.917605 | 4.330517e-86 | 1.260546e-81 |
| MsG0880044387.01 | MsG0880046273.01 | -0.807657 | 4.541797e-50 | 2.544064e-47 |
| MsG0880044387.01 | MsG0880046341.01 | 0.905310 | 4.914005e-80 | 7.900754e-76 |
| MsG0880044387.01 | MsG0880046469.01 | 0.883347 | 4.847511e-71 | 3.061795e-67 |
| MsG0880044387.01 | MsG0880046584.01 | 0.825439 | 4.684245e-54 | 4.269448e-51 |
| MsG0880044387.01 | MsG0880046630.01 | 0.845355 | 4.276650e-59 | 7.108189e-56 |
| MsG0880044387.01 | MsG0880046639.01 | 0.836074 | 1.157851e-56 | 1.443295e-53 |
| MsG0880044387.01 | MsG0880046759.01 | 0.821023 | 5.033903e-53 | 4.048793e-50 |
| MsG0880044387.01 | MsG0880046838.01 | 0.817769 | 2.776735e-52 | 2.040656e-49 |
| MsG0880044387.01 | MsG0880046863.01 | -0.810123 | 1.347847e-50 | 8.057748e-48 |
| MsG0880044387.01 | MsG0880046876.01 | 0.899624 | 1.648633e-77 | 2.054904e-73 |
| MsG0880044387.01 | MsG0880047057.01 | -0.810366 | 1.194546e-50 | 7.186895e-48 |
| MsG0880044387.01 | MsG0880047318.01 | 0.890980 | 6.029317e-74 | 5.187425e-70 |
| MsG0880044387.01 | MsG0880047363.01 | 0.831176 | 1.936129e-55 | 2.084683e-52 |
| MsG0880044387.01 | MsG0880047406.01 | 0.815004 | 1.154048e-51 | 7.863055e-49 |
| MsG0880044387.01 | MsG0880047493.01 | -0.840602 | 7.876737e-58 | 1.127654e-54 |
| MsG0880044387.01 | MsG0880047536.01 | 0.804663 | 1.938660e-49 | 1.005407e-46 |
| MsG0880044387.01 | MsG0880047578.01 | 0.853031 | 3.124935e-61 | 6.659864e-58 |
| MsG0880044387.01 | MsG0880047627.01 | 0.847511 | 1.104033e-59 | 1.966990e-56 |
| MsG0880044387.01 | MsG0880047628.01 | 0.870020 | 1.999914e-66 | 7.663671e-63 |
| MsG0880044387.01 | MsG0880047661.01 | 0.845751 | 3.341268e-59 | 5.625247e-56 |
| MsG0880044387.01 | MsG0880047664.01 | -0.829568 | 4.785647e-55 | 4.916424e-52 |
| MsG0880044387.01 | MsG0880047714.01 | -0.824657 | 7.169568e-54 | 6.391359e-51 |
| MsG0880044387.01 | MsG0880047723.01 | 0.811001 | 8.706456e-51 | 5.328285e-48 |
| MsG0180002808.01 | MsG0880044387.01 | -0.802013 | 6.860755e-49 | 3.324528e-46 |
| MsG0180002809.01 | MsG0880044387.01 | 0.868566 | 5.938484e-66 | 2.158232e-62 |
| MsG0180002982.01 | MsG0880044387.01 | 0.815986 | 6.979269e-52 | 4.884634e-49 |
| MsG0180003114.01 | MsG0880044387.01 | 0.855681 | 5.357613e-62 | 1.247035e-58 |
| MsG0180003296.01 | MsG0880044387.01 | 0.826794 | 2.230389e-54 | 2.113061e-51 |
| MsG0180003324.01 | MsG0880044387.01 | 0.811932 | 5.467569e-51 | 3.428837e-48 |
| MsG0180003351.01 | MsG0880044387.01 | 0.881952 | 1.563898e-70 | 9.347300e-67 |
| MsG0180003405.01 | MsG0880044387.01 | 0.833543 | 5.021938e-56 | 5.801730e-53 |
| MsG0180003484.01 | MsG0880044387.01 | -0.845029 | 5.239691e-59 | 8.618583e-56 |
| MsG0180003617.01 | MsG0880044387.01 | 0.847314 | 1.251107e-59 | 2.214577e-56 |
| MsG0180003757.01 | MsG0880044387.01 | 0.889432 | 2.434615e-73 | 1.963576e-69 |
| MsG0180003758.01 | MsG0880044387.01 | 0.898696 | 4.118117e-77 | 4.923256e-73 |
| MsG0180003759.01 | MsG0880044387.01 | 0.848555 | 5.687410e-60 | 1.047670e-56 |
| MsG0180003779.01 | MsG0880044387.01 | 0.881365 | 2.549650e-70 | 1.489518e-66 |
| MsG0180003880.01 | MsG0880044387.01 | 0.867520 | 1.288681e-65 | 4.511973e-62 |
| MsG0180003904.01 | MsG0880044387.01 | 0.860131 | 2.557724e-63 | 6.918852e-60 |
| MsG0180003908.01 | MsG0880044387.01 | 0.837320 | 5.573332e-57 | 7.212825e-54 |
| MsG0180003980.01 | MsG0880044387.01 | 0.848054 | 7.825015e-60 | 1.418156e-56 |
| MsG0180003985.01 | MsG0880044387.01 | 0.871921 | 4.727544e-67 | 1.940360e-63 |
| MsG0180004018.01 | MsG0880044387.01 | 0.806217 | 9.155068e-50 | 4.941438e-47 |
| MsG0180004124.01 | MsG0880044387.01 | 0.860067 | 2.674531e-63 | 7.219223e-60 |
| MsG0180004125.01 | MsG0880044387.01 | 0.862422 | 5.125622e-64 | 1.500346e-60 |
| MsG0180004177.01 | MsG0880044387.01 | 0.832822 | 7.590122e-56 | 8.580978e-53 |
| MsG0180004226.01 | MsG0880044387.01 | 0.820560 | 6.430306e-53 | 5.105120e-50 |
| MsG0180004292.01 | MsG0880044387.01 | 0.830189 | 3.378580e-55 | 3.534281e-52 |
| MsG0180004322.01 | MsG0880044387.01 | 0.866777 | 2.223802e-65 | 7.585977e-62 |
| MsG0180004386.01 | MsG0880044387.01 | 0.808727 | 2.686651e-50 | 1.547725e-47 |
| MsG0180004502.01 | MsG0880044387.01 | 0.844636 | 6.687468e-59 | 1.086354e-55 |
| MsG0180004553.01 | MsG0880044387.01 | 0.888879 | 3.988534e-73 | 3.145901e-69 |
| MsG0180004580.01 | MsG0880044387.01 | 0.875209 | 3.689431e-68 | 1.708649e-64 |
| MsG0180004581.01 | MsG0880044387.01 | 0.886848 | 2.392602e-72 | 1.737199e-68 |
| MsG0180004634.01 | MsG0880044387.01 | 0.859791 | 3.239051e-63 | 8.659151e-60 |
| MsG0180004714.01 | MsG0880044387.01 | 0.832540 | 8.917898e-56 | 9.998091e-53 |
| MsG0180004731.01 | MsG0880044387.01 | 0.874618 | 5.868884e-68 | 2.659531e-64 |
| MsG0180004737.01 | MsG0880044387.01 | 0.896791 | 2.626621e-76 | 2.885105e-72 |
| MsG0180004747.01 | MsG0880044387.01 | 0.839900 | 1.201229e-57 | 1.682726e-54 |
| MsG0180004773.01 | MsG0880044387.01 | 0.828038 | 1.122799e-54 | 1.103128e-51 |
| MsG0180004787.01 | MsG0880044387.01 | 0.839001 | 2.056875e-57 | 2.802654e-54 |
| MsG0180004859.01 | MsG0880044387.01 | -0.813394 | 2.617441e-51 | 1.707320e-48 |
| MsG0180004957.01 | MsG0880044387.01 | 0.801249 | 9.843711e-49 | 4.678688e-46 |
| MsG0180005242.01 | MsG0880044387.01 | 0.816234 | 6.143032e-52 | 4.328585e-49 |
| MsG0180005272.01 | MsG0880044387.01 | -0.818807 | 1.616522e-52 | 1.222361e-49 |
| MsG0180005291.01 | MsG0880044387.01 | 0.873074 | 1.947853e-67 | 8.342492e-64 |
| MsG0180005328.01 | MsG0880044387.01 | -0.831807 | 1.353710e-55 | 1.485380e-52 |
| MsG0180005353.01 | MsG0880044387.01 | -0.809626 | 1.724405e-50 | 1.017601e-47 |
| MsG0180005369.01 | MsG0880044387.01 | 0.894756 | 1.827752e-75 | 1.842270e-71 |
| MsG0180005474.01 | MsG0880044387.01 | 0.839481 | 1.544116e-57 | 2.135248e-54 |
| MsG0180005542.01 | MsG0880044387.01 | -0.805542 | 1.269542e-49 | 6.734262e-47 |
| MsG0180005672.01 | MsG0880044387.01 | 0.824687 | 7.050840e-54 | 6.291211e-51 |
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| MsG0580026362.01 | MsG0880044387.01 | 0.871079 | 8.980075e-67 | 3.575387e-63 |
| MsG0580026492.01 | MsG0880044387.01 | -0.801720 | 7.880613e-49 | 3.790311e-46 |
| MsG0580027095.01 | MsG0880044387.01 | 0.851865 | 6.716646e-61 | 1.377940e-57 |
| MsG0580027249.01 | MsG0880044387.01 | 0.804530 | 2.067037e-49 | 1.068248e-46 |
| MsG0580027276.01 | MsG0880044387.01 | 0.874577 | 6.058204e-68 | 2.740938e-64 |
| MsG0580027325.01 | MsG0880044387.01 | 0.905466 | 4.165519e-80 | 6.746640e-76 |
| MsG0580027646.01 | MsG0880044387.01 | -0.815534 | 8.802410e-52 | 6.084874e-49 |
| MsG0580027797.01 | MsG0880044387.01 | -0.834809 | 2.417641e-56 | 2.900938e-53 |
| MsG0580028159.01 | MsG0880044387.01 | 0.850684 | 1.448342e-60 | 2.859848e-57 |
| MsG0580028302.01 | MsG0880044387.01 | -0.831822 | 1.342255e-55 | 1.473460e-52 |
| MsG0580029172.01 | MsG0880044387.01 | 0.867495 | 1.312164e-65 | 4.590506e-62 |
| MsG0580029177.01 | MsG0880044387.01 | 0.887800 | 1.037388e-72 | 7.830485e-69 |
| MsG0580029296.01 | MsG0880044387.01 | -0.810304 | 1.232223e-50 | 7.401114e-48 |
| MsG0580029696.01 | MsG0880044387.01 | -0.820348 | 7.192169e-53 | 5.676662e-50 |
| MsG0580029751.01 | MsG0880044387.01 | 0.836664 | 8.194004e-57 | 1.039582e-53 |
| MsG0580029792.01 | MsG0880044387.01 | 0.851188 | 1.044514e-60 | 2.097189e-57 |
| MsG0580029816.01 | MsG0880044387.01 | 0.838930 | 2.146180e-57 | 2.918000e-54 |
| MsG0580029991.01 | MsG0880044387.01 | 0.833012 | 6.807351e-56 | 7.740675e-53 |
| MsG0580030014.01 | MsG0880044387.01 | 0.887859 | 9.849343e-73 | 7.449439e-69 |
| MsG0580030067.01 | MsG0880044387.01 | 0.804201 | 2.420156e-49 | 1.240224e-46 |
| MsG0580030133.01 | MsG0880044387.01 | -0.800454 | 1.430154e-48 | 6.661855e-46 |
| MsG0580030179.01 | MsG0880044387.01 | -0.821489 | 3.928772e-53 | 3.200818e-50 |
| MsG0580030197.01 | MsG0880044387.01 | 0.877911 | 4.297844e-69 | 2.199946e-65 |
| MsG0580030203.01 | MsG0880044387.01 | 0.806760 | 7.035798e-50 | 3.850326e-47 |
| MsG0580030237.01 | MsG0880044387.01 | 0.863075 | 3.223737e-64 | 9.650819e-61 |
| MsG0680030439.01 | MsG0880044387.01 | 0.872162 | 3.931642e-67 | 1.628260e-63 |
| MsG0680030441.01 | MsG0880044387.01 | 0.830482 | 2.864630e-55 | 3.021792e-52 |
| MsG0680030545.01 | MsG0880044387.01 | -0.838867 | 2.228412e-57 | 3.024005e-54 |
| MsG0680030635.01 | MsG0880044387.01 | 0.910329 | 2.115545e-82 | 4.298540e-78 |
| MsG0680030644.01 | MsG0880044387.01 | 0.816402 | 5.632796e-52 | 3.987377e-49 |
| MsG0680030658.01 | MsG0880044387.01 | 0.872651 | 2.699254e-67 | 1.138482e-63 |
| MsG0280006534.01 | MsG0880044387.01 | 0.829742 | 4.341436e-55 | 4.483565e-52 |
| MsG0280006575.01 | MsG0880044387.01 | -0.826994 | 1.998407e-54 | 1.904389e-51 |
| MsG0280006883.01 | MsG0880044387.01 | -0.822800 | 1.951231e-53 | 1.650082e-50 |
| MsG0280006898.01 | MsG0880044387.01 | -0.817638 | 2.972466e-52 | 2.176562e-49 |
| MsG0280006973.01 | MsG0880044387.01 | 0.874966 | 4.465860e-68 | 2.050184e-64 |
| MsG0280007016.01 | MsG0880044387.01 | 0.818610 | 1.791341e-52 | 1.347206e-49 |
| MsG0280007017.01 | MsG0880044387.01 | 0.863341 | 2.667054e-64 | 8.058922e-61 |
| MsG0280007021.01 | MsG0880044387.01 | 0.800288 | 1.546279e-48 | 7.172697e-46 |
| MsG0280007079.01 | MsG0880044387.01 | 0.820039 | 8.467965e-53 | 6.626962e-50 |
| MsG0280007136.01 | MsG0880044387.01 | 0.836035 | 1.184575e-56 | 1.474745e-53 |
| MsG0280007201.01 | MsG0880044387.01 | -0.827047 | 1.940825e-54 | 1.852320e-51 |
| MsG0280007216.01 | MsG0880044387.01 | -0.819113 | 1.377228e-52 | 1.050310e-49 |
| MsG0280007233.01 | MsG0880044387.01 | 0.832013 | 1.204085e-55 | 1.329135e-52 |
| MsG0280007247.01 | MsG0880044387.01 | 0.878945 | 1.862059e-69 | 9.908257e-66 |
| MsG0280007288.01 | MsG0880044387.01 | 0.923333 | 3.049069e-89 | 1.212401e-84 |
| MsG0280007291.01 | MsG0880044387.01 | 0.918129 | 2.279599e-86 | 6.829429e-82 |
| MsG0280007322.01 | MsG0880044387.01 | 0.814007 | 1.918093e-51 | 1.272060e-48 |
| MsG0280007427.01 | MsG0880044387.01 | -0.809191 | 2.137871e-50 | 1.246984e-47 |
| MsG0280007505.01 | MsG0880044387.01 | -0.808108 | 3.641813e-50 | 2.064246e-47 |
| MsG0280007576.01 | MsG0880044387.01 | 0.803458 | 3.453546e-49 | 1.736364e-46 |
| MsG0280007649.01 | MsG0880044387.01 | 0.894412 | 2.526630e-75 | 2.508797e-71 |
| MsG0280007650.01 | MsG0880044387.01 | 0.884231 | 2.288534e-71 | 1.498188e-67 |
| MsG0280007653.01 | MsG0880044387.01 | 0.819613 | 1.059564e-52 | 8.193085e-50 |
| MsG0280007786.01 | MsG0880044387.01 | -0.894846 | 1.678493e-75 | 1.697741e-71 |
| MsG0280008328.01 | MsG0880044387.01 | -0.812891 | 3.373956e-51 | 2.170964e-48 |
| MsG0280008430.01 | MsG0880044387.01 | 0.865238 | 6.827813e-65 | 2.205655e-61 |
| MsG0280008495.01 | MsG0880044387.01 | -0.821017 | 5.048311e-53 | 4.059704e-50 |
| MsG0280008820.01 | MsG0880044387.01 | 0.814233 | 1.710349e-51 | 1.141251e-48 |
| MsG0280008863.01 | MsG0880044387.01 | 0.811938 | 5.450326e-51 | 3.418655e-48 |
| MsG0280008935.01 | MsG0880044387.01 | 0.827172 | 1.811840e-54 | 1.735659e-51 |
| MsG0280009008.01 | MsG0880044387.01 | 0.840376 | 9.023584e-58 | 1.282911e-54 |
| MsG0280009079.01 | MsG0880044387.01 | 0.862848 | 3.788444e-64 | 1.125518e-60 |
| MsG0280009094.01 | MsG0880044387.01 | 0.875496 | 2.943940e-68 | 1.377331e-64 |
| MsG0280009101.01 | MsG0880044387.01 | 0.812050 | 5.151966e-51 | 3.241405e-48 |
| MsG0280009103.01 | MsG0880044387.01 | 0.807811 | 4.211463e-50 | 2.368598e-47 |
| MsG0280009167.01 | MsG0880044387.01 | -0.834024 | 3.807556e-56 | 4.462568e-53 |
| MsG0280009287.01 | MsG0880044387.01 | 0.872723 | 2.554131e-67 | 1.080100e-63 |
| MsG0280009518.01 | MsG0880044387.01 | 0.811480 | 6.856769e-51 | 4.249143e-48 |
| MsG0280009526.01 | MsG0880044387.01 | -0.888267 | 6.867963e-73 | 5.283980e-69 |
| MsG0280009541.01 | MsG0880044387.01 | 0.815542 | 8.762720e-52 | 6.058879e-49 |
| MsG0280009579.01 | MsG0880044387.01 | 0.876364 | 1.480726e-68 | 7.158622e-65 |
| MsG0280009742.01 | MsG0880044387.01 | 0.900711 | 5.574257e-78 | 7.294859e-74 |
| MsG0280009776.01 | MsG0880044387.01 | 0.868715 | 5.311662e-66 | 1.941123e-62 |
| MsG0280009864.01 | MsG0880044387.01 | 0.893182 | 7.977200e-75 | 7.522186e-71 |
| MsG0280010019.01 | MsG0880044387.01 | -0.810928 | 9.031337e-51 | 5.516101e-48 |
| MsG0280010142.01 | MsG0880044387.01 | 0.853130 | 2.928472e-61 | 6.261833e-58 |
| MsG0280010149.01 | MsG0880044387.01 | 0.901431 | 2.697296e-78 | 3.643708e-74 |
| MsG0280010227.01 | MsG0880044387.01 | 0.855271 | 7.057254e-62 | 1.620231e-58 |
| MsG0280010240.01 | MsG0880044387.01 | -0.855676 | 5.377427e-62 | 1.251394e-58 |
| MsG0280010356.01 | MsG0880044387.01 | 0.868188 | 7.859864e-66 | 2.817882e-62 |
| MsG0680035841.01 | MsG0880044387.01 | -0.808120 | 3.619975e-50 | 2.052581e-47 |
| MsG0680035870.01 | MsG0880044387.01 | 0.879399 | 1.285916e-69 | 6.962249e-66 |
| MsG0780035993.01 | MsG0880044387.01 | -0.818786 | 1.634723e-52 | 1.235434e-49 |
| MsG0780035994.01 | MsG0880044387.01 | 0.889651 | 2.000518e-73 | 1.628478e-69 |
| MsG0780036064.01 | MsG0880044387.01 | 0.866436 | 2.856043e-65 | 9.624733e-62 |
| MsG0780036067.01 | MsG0880044387.01 | 0.866033 | 3.833021e-65 | 1.273523e-61 |
| MsG0780036068.01 | MsG0880044387.01 | 0.860105 | 2.605103e-63 | 7.040655e-60 |
| MsG0780036236.01 | MsG0880044387.01 | 0.837462 | 5.124640e-57 | 6.661895e-54 |
| MsG0780036661.01 | MsG0880044387.01 | -0.810701 | 1.011230e-50 | 6.138631e-48 |
| MsG0780036843.01 | MsG0880044387.01 | -0.801041 | 1.085583e-48 | 5.133028e-46 |
| MsG0780036909.01 | MsG0880044387.01 | 0.882265 | 1.203832e-70 | 7.284750e-67 |
| MsG0780037182.01 | MsG0880044387.01 | -0.834526 | 2.848599e-56 | 3.389665e-53 |
| MsG0780037458.01 | MsG0880044387.01 | 0.856304 | 3.523151e-62 | 8.370588e-59 |
| MsG0780037655.01 | MsG0880044387.01 | 0.810349 | 1.205069e-50 | 7.246775e-48 |
| MsG0780037698.01 | MsG0880044387.01 | 0.872647 | 2.707448e-67 | 1.141732e-63 |
| MsG0780037734.01 | MsG0880044387.01 | 0.859118 | 5.157912e-63 | 1.347049e-59 |
| MsG0780038030.01 | MsG0880044387.01 | 0.824462 | 7.967245e-54 | 7.061525e-51 |
| MsG0780038047.01 | MsG0880044387.01 | 0.889926 | 1.563753e-73 | 1.287321e-69 |
| MsG0780038108.01 | MsG0880044387.01 | 0.806635 | 7.476603e-50 | 4.078312e-47 |
| MsG0780038197.01 | MsG0880044387.01 | 0.839017 | 2.036902e-57 | 2.776710e-54 |
| MsG0780038305.01 | MsG0880044387.01 | -0.812576 | 3.955161e-51 | 2.523927e-48 |
| MsG0780038496.01 | MsG0880044387.01 | 0.806962 | 6.376165e-50 | 3.507697e-47 |
| MsG0780038519.01 | MsG0880044387.01 | -0.805707 | 1.172018e-49 | 6.244125e-47 |
| MsG0780038539.01 | MsG0880044387.01 | 0.821551 | 3.801418e-53 | 3.102490e-50 |
| MsG0780038573.01 | MsG0880044387.01 | 0.856681 | 2.729326e-62 | 6.565924e-59 |
| MsG0780038756.01 | MsG0880044387.01 | 0.827156 | 1.828171e-54 | 1.750409e-51 |
| MsG0780038810.01 | MsG0880044387.01 | -0.804956 | 1.684204e-49 | 8.801160e-47 |
| MsG0780038834.01 | MsG0880044387.01 | 0.870888 | 1.038013e-66 | 4.105142e-63 |
| MsG0780038848.01 | MsG0880044387.01 | 0.831554 | 1.562861e-55 | 1.701993e-52 |
| MsG0780038922.01 | MsG0880044387.01 | -0.802261 | 6.102434e-49 | 2.975805e-46 |
| MsG0780039237.01 | MsG0880044387.01 | -0.805631 | 1.216277e-49 | 6.466784e-47 |
| MsG0780039287.01 | MsG0880044387.01 | 0.880274 | 6.282106e-70 | 3.516756e-66 |
| MsG0780039431.01 | MsG0880044387.01 | -0.818235 | 2.178583e-52 | 1.621559e-49 |
| MsG0780039593.01 | MsG0880044387.01 | -0.829622 | 4.643999e-55 | 4.778582e-52 |
| MsG0780039596.01 | MsG0880044387.01 | 0.819253 | 1.279913e-52 | 9.798680e-50 |
| MsG0780039702.01 | MsG0880044387.01 | -0.802306 | 5.973772e-49 | 2.916575e-46 |
| MsG0780039704.01 | MsG0880044387.01 | 0.828912 | 6.903820e-55 | 6.957030e-52 |
| MsG0780039821.01 | MsG0880044387.01 | 0.895985 | 5.690589e-76 | 6.034628e-72 |
| MsG0780039836.01 | MsG0880044387.01 | 0.886698 | 2.726613e-72 | 1.968383e-68 |
| MsG0780039838.01 | MsG0880044387.01 | 0.897970 | 8.381345e-77 | 9.706596e-73 |
| MsG0780039839.01 | MsG0880044387.01 | 0.879552 | 1.135472e-69 | 6.181287e-66 |
| MsG0780039859.01 | MsG0880044387.01 | 0.801520 | 8.663170e-49 | 4.145797e-46 |
| MsG0780039860.01 | MsG0880044387.01 | 0.849752 | 2.643452e-60 | 5.062629e-57 |
| MsG0780039902.01 | MsG0880044387.01 | 0.864860 | 8.969544e-65 | 2.857893e-61 |
| MsG0780039903.01 | MsG0880044387.01 | 0.813328 | 2.706280e-51 | 1.762025e-48 |
| MsG0780039916.01 | MsG0880044387.01 | -0.824466 | 7.948355e-54 | 7.045664e-51 |
| MsG0780040072.01 | MsG0880044387.01 | 0.890689 | 7.848522e-74 | 6.669801e-70 |
| MsG0780040121.01 | MsG0880044387.01 | 0.892183 | 2.007495e-74 | 1.815117e-70 |
| MsG0780040154.01 | MsG0880044387.01 | 0.824828 | 6.532419e-54 | 5.851960e-51 |
| MsG0780040158.01 | MsG0880044387.01 | 0.871492 | 6.559754e-67 | 2.651514e-63 |
| MsG0780040159.01 | MsG0880044387.01 | 0.869264 | 3.527859e-66 | 1.315569e-62 |
| MsG0780040167.01 | MsG0880044387.01 | 0.868027 | 8.859802e-66 | 3.157724e-62 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880044387.01.T01 | MTR_8g061130 | 95.946 | 148 | 5 | 1 | 1 | 148 | 1 | 147 | 4.38e-100 | 283 |
| MsG0880044387.01.T01 | MTR_0002s0770 | 73.529 | 68 | 18 | 0 | 72 | 139 | 15 | 82 | 1.65e-31 | 109 |
| MsG0880044387.01.T02 | MTR_8g061130 | 98.333 | 60 | 1 | 0 | 1 | 60 | 88 | 147 | 1.86e-37 | 121 |
| MsG0880044387.01.T02 | MTR_0002s0770 | 76.471 | 51 | 12 | 0 | 1 | 51 | 32 | 82 | 6.93e-22 | 81.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880044387.01.T01 | AT4G11175 | 69.014 | 71 | 22 | 0 | 69 | 139 | 67 | 137 | 1.03e-30 | 108 |
| MsG0880044387.01.T02 | AT4G11175 | 70.588 | 51 | 15 | 0 | 1 | 51 | 87 | 137 | 6.31e-21 | 79.7 |
Find 67 sgRNAs with CRISPR-Local
Find 81 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGATGGTGGAGTGGGGTTT+AGG | 0.216308 | 8:-41176032 | None:intergenic |
| CCAAAGGACGCATCATTTAT+AGG | 0.221209 | 8:+41176277 | MsG0880044387.01.T01:CDS |
| GGATGGTGGAGTGGGGTTTA+GGG | 0.277606 | 8:-41176031 | None:intergenic |
| GATGGTGGGCGGAGGAAGGA+TGG | 0.340324 | 8:-41176006 | None:intergenic |
| AGGAGTGGGTGGTGAATGAT+TGG | 0.367617 | 8:-41175948 | None:intergenic |
| GTTGGCGATGGTGAATGATT+GGG | 0.370868 | 8:-41175918 | None:intergenic |
| TGGGGTGCGAAAGTGGAGAG+TGG | 0.374140 | 8:-41175986 | None:intergenic |
| GAATGATTGGGGCGTGGAAT+GGG | 0.377126 | 8:-41175906 | None:intergenic |
| CCTATAAATGATGCGTCCTT+TGG | 0.381193 | 8:-41176277 | None:intergenic |
| AATTACGTTCGGATCCTTCC+TGG | 0.385097 | 8:+41176216 | MsG0880044387.01.T01:CDS |
| TGGTGGAGTGGGGTTTAGGG+GGG | 0.388729 | 8:-41176028 | None:intergenic |
| GATGGTGGAGTGGGGTTTAG+GGG | 0.391934 | 8:-41176030 | None:intergenic |
| ATGGTGGGCGGAGGAAGGAT+GGG | 0.397127 | 8:-41176005 | None:intergenic |
| ACAAAGCCAGCGAGCAAAAG+TGG | 0.399064 | 8:+41176088 | MsG0880044387.01.T01:CDS |
| ATGGTGGAGTGGGGTTTAGG+GGG | 0.407363 | 8:-41176029 | None:intergenic |
| GGTTGGCGATGGTGAATGAT+TGG | 0.410559 | 8:-41175919 | None:intergenic |
| TGGTGGGCGGAGGAAGGATG+GGG | 0.418471 | 8:-41176004 | None:intergenic |
| CGAACACGGAACATGCCGTT+AGG | 0.422494 | 8:-41176141 | None:intergenic |
| GGATCCGAACGTAATTCTTT+CGG | 0.427721 | 8:-41176209 | None:intergenic |
| CTTATCCTTGGATATATCTC+TGG | 0.434923 | 8:+41176180 | MsG0880044387.01.T01:CDS |
| GTGGTGAATGATTGGGTAGA+GGG | 0.438792 | 8:-41175940 | None:intergenic |
| GTGAAGATGGATGGTGGAGT+GGG | 0.440957 | 8:-41176039 | None:intergenic |
| GGAAGGATGGGGTGCGAAAG+TGG | 0.455893 | 8:-41175993 | None:intergenic |
| TGAATGATTGGGGCGTGGAA+TGG | 0.456507 | 8:-41175907 | None:intergenic |
| ATAAATGATGCGTCCTTTGG+AGG | 0.459795 | 8:-41176274 | None:intergenic |
| GGGGTGCGAAAGTGGAGAGT+GGG | 0.461179 | 8:-41175985 | None:intergenic |
| CAGAGATATATCCAAGGATA+AGG | 0.465359 | 8:-41176179 | None:intergenic |
| GGGTGCGAAAGTGGAGAGTG+GGG | 0.467038 | 8:-41175984 | None:intergenic |
| CTTGGCGGAGACGGTGAAGA+TGG | 0.483060 | 8:-41176052 | None:intergenic |
| GATAATGAAGACCTTATCCT+TGG | 0.484697 | 8:+41176168 | MsG0880044387.01.T01:CDS |
| TATAGGCTTCGTAATACTCC+TGG | 0.487758 | 8:+41176294 | MsG0880044387.01.T01:CDS |
| GGTTGAGGACTTGGCGGAGA+CGG | 0.491903 | 8:-41176061 | None:intergenic |
| GATTGGGGCGTGGAATGGGA+TGG | 0.497058 | 8:-41175902 | None:intergenic |
| GGTGAAGATGGATGGTGGAG+TGG | 0.509570 | 8:-41176040 | None:intergenic |
| TTTGCTCGCTGGCTTTGTCG+GGG | 0.527845 | 8:-41176083 | None:intergenic |
| AACTAAGAAGAGCCACCACC+AGG | 0.533810 | 8:-41176312 | None:intergenic |
| TGAATGATTGGGTAGAGGGT+TGG | 0.551981 | 8:-41175936 | None:intergenic |
| CTTCGTAATACTCCTGGTGG+TGG | 0.553297 | 8:+41176300 | MsG0880044387.01.T01:CDS |
| TTGGCGATGGTGAATGATTG+GGG | 0.557416 | 8:-41175917 | None:intergenic |
| GGTGGTGAATGATTGGGTAG+AGG | 0.559640 | 8:-41175941 | None:intergenic |
| GTGGAATGGGATGGAAGATG+AGG | 0.564521 | 8:-41175893 | None:intergenic |
| TTGCTCGCTGGCTTTGTCGG+GGG | 0.564722 | 8:-41176082 | None:intergenic |
| TGAAGATGGATGGTGGAGTG+GGG | 0.567905 | 8:-41176038 | None:intergenic |
| GGATCCGAAAGAATTACGTT+CGG | 0.574169 | 8:+41176205 | MsG0880044387.01.T01:CDS |
| CACGGAACATGCCGTTAGGG+AGG | 0.578464 | 8:-41176137 | None:intergenic |
| GAACACGGAACATGCCGTTA+GGG | 0.578793 | 8:-41176140 | None:intergenic |
| AGTCGATATGATTCCTCCAA+AGG | 0.579977 | 8:+41176261 | MsG0880044387.01.T01:CDS |
| CTTCATTATCGAGACGAACA+CGG | 0.580715 | 8:-41176155 | None:intergenic |
| TCAACTCTAACTCTATCTCC+AGG | 0.592855 | 8:-41176234 | None:intergenic |
| ATCACAGAATCCCTCCCTAA+CGG | 0.596048 | 8:+41176126 | MsG0880044387.01.T01:CDS |
| GCGGAGACGGTGAAGATGGA+TGG | 0.600621 | 8:-41176048 | None:intergenic |
| GGAGTGGGTGGTGAATGATT+GGG | 0.606231 | 8:-41175947 | None:intergenic |
| ATTGGGTAGAGGGTTGGCGA+TGG | 0.606708 | 8:-41175930 | None:intergenic |
| CAAAGCCAGCGAGCAAAAGT+GGG | 0.609253 | 8:+41176089 | MsG0880044387.01.T01:CDS |
| GGTGCGAAAGTGGAGAGTGG+GGG | 0.609773 | 8:-41175983 | None:intergenic |
| CTCTAACTCTATCTCCAGGA+AGG | 0.615980 | 8:-41176230 | None:intergenic |
| GGGTGTGGAAAGAAAAGGAG+TGG | 0.621177 | 8:-41175963 | None:intergenic |
| GTGGAAAGAAAAGGAGTGGG+TGG | 0.622441 | 8:-41175959 | None:intergenic |
| GAGACGGTGAAGATGGATGG+TGG | 0.626813 | 8:-41176045 | None:intergenic |
| ATTCTGTGATGAGACCTTCG+TGG | 0.627359 | 8:-41176113 | None:intergenic |
| ACGGAACATGCCGTTAGGGA+GGG | 0.631389 | 8:-41176136 | None:intergenic |
| GATGGTGAATGATTGGGGCG+TGG | 0.638062 | 8:-41175912 | None:intergenic |
| TCCTTGGATATATCTCTGGA+AGG | 0.641053 | 8:+41176184 | MsG0880044387.01.T01:CDS |
| TCCTTCCAGAGATATATCCA+AGG | 0.654970 | 8:-41176185 | None:intergenic |
| GGTGTGGAAAGAAAAGGAGT+GGG | 0.666040 | 8:-41175962 | None:intergenic |
| GAGCAAAAGTGGGTCCACGA+AGG | 0.697991 | 8:+41176099 | MsG0880044387.01.T01:CDS |
| AGGCTTCGTAATACTCCTGG+TGG | 0.702905 | 8:+41176297 | MsG0880044387.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| CAGAGATATATCCAAGGATA+AGG | - | Chr8:41176182-41176201 | None:intergenic | 35.0% | |
| CTTATCCTTGGATATATCTC+TGG | + | Chr8:41176180-41176199 | MsG0880044387.01.T01:CDS | 35.0% | |
| GATAATGAAGACCTTATCCT+TGG | + | Chr8:41176168-41176187 | MsG0880044387.01.T01:CDS | 35.0% | |
| AGTCGATATGATTCCTCCAA+AGG | + | Chr8:41176261-41176280 | MsG0880044387.01.T01:CDS | 40.0% | |
| ATAAATGATGCGTCCTTTGG+AGG | - | Chr8:41176277-41176296 | None:intergenic | 40.0% | |
| CCAAAGGACGCATCATTTAT+AGG | + | Chr8:41176277-41176296 | MsG0880044387.01.T01:CDS | 40.0% | |
| CCTATAAATGATGCGTCCTT+TGG | - | Chr8:41176280-41176299 | None:intergenic | 40.0% | |
| CTTCATTATCGAGACGAACA+CGG | - | Chr8:41176158-41176177 | None:intergenic | 40.0% | |
| GGATCCGAAAGAATTACGTT+CGG | + | Chr8:41176205-41176224 | MsG0880044387.01.T01:CDS | 40.0% | |
| GGATCCGAACGTAATTCTTT+CGG | - | Chr8:41176212-41176231 | None:intergenic | 40.0% | |
| TATAGGCTTCGTAATACTCC+TGG | + | Chr8:41176294-41176313 | MsG0880044387.01.T01:CDS | 40.0% | |
| TCAACTCTAACTCTATCTCC+AGG | - | Chr8:41176237-41176256 | None:intergenic | 40.0% | |
| TCCTTCCAGAGATATATCCA+AGG | - | Chr8:41176188-41176207 | None:intergenic | 40.0% | |
| TCCTTGGATATATCTCTGGA+AGG | + | Chr8:41176184-41176203 | MsG0880044387.01.T01:CDS | 40.0% | |
| AATTACGTTCGGATCCTTCC+TGG | + | Chr8:41176216-41176235 | MsG0880044387.01.T01:CDS | 45.0% | |
| ATCACAGAATCCCTCCCTAA+CGG | + | Chr8:41176126-41176145 | MsG0880044387.01.T01:CDS | 45.0% | |
| ATTCTGTGATGAGACCTTCG+TGG | - | Chr8:41176116-41176135 | None:intergenic | 45.0% | |
| CTCTAACTCTATCTCCAGGA+AGG | - | Chr8:41176233-41176252 | None:intergenic | 45.0% | |
| GGTGTGGAAAGAAAAGGAGT+GGG | - | Chr8:41175965-41175984 | None:intergenic | 45.0% | |
| GTGGTGAATGATTGGGTAGA+GGG | - | Chr8:41175943-41175962 | None:intergenic | 45.0% | |
| GTTGGCGATGGTGAATGATT+GGG | - | Chr8:41175921-41175940 | None:intergenic | 45.0% | |
| TGAATGATTGGGTAGAGGGT+TGG | - | Chr8:41175939-41175958 | None:intergenic | 45.0% | |
| TTGGCGATGGTGAATGATTG+GGG | - | Chr8:41175920-41175939 | None:intergenic | 45.0% | |
| AACTAAGAAGAGCCACCACC+AGG | - | Chr8:41176315-41176334 | None:intergenic | 50.0% | |
| ACAAAGCCAGCGAGCAAAAG+TGG | + | Chr8:41176088-41176107 | MsG0880044387.01.T01:CDS | 50.0% | |
| AGGAGTGGGTGGTGAATGAT+TGG | - | Chr8:41175951-41175970 | None:intergenic | 50.0% | |
| AGGCTTCGTAATACTCCTGG+TGG | + | Chr8:41176297-41176316 | MsG0880044387.01.T01:CDS | 50.0% | |
| CAAAGCCAGCGAGCAAAAGT+GGG | + | Chr8:41176089-41176108 | MsG0880044387.01.T01:CDS | 50.0% | |
| CTTCGTAATACTCCTGGTGG+TGG | + | Chr8:41176300-41176319 | MsG0880044387.01.T01:CDS | 50.0% | |
| GAACACGGAACATGCCGTTA+GGG | - | Chr8:41176143-41176162 | None:intergenic | 50.0% | |
| GAATGATTGGGGCGTGGAAT+GGG | - | Chr8:41175909-41175928 | None:intergenic | 50.0% | |
| GGAGTGGGTGGTGAATGATT+GGG | - | Chr8:41175950-41175969 | None:intergenic | 50.0% | |
| GGGTGTGGAAAGAAAAGGAG+TGG | - | Chr8:41175966-41175985 | None:intergenic | 50.0% | |
| GGTGGTGAATGATTGGGTAG+AGG | - | Chr8:41175944-41175963 | None:intergenic | 50.0% | |
| GGTTGGCGATGGTGAATGAT+TGG | - | Chr8:41175922-41175941 | None:intergenic | 50.0% | |
| GTGGAAAGAAAAGGAGTGGG+TGG | - | Chr8:41175962-41175981 | None:intergenic | 50.0% | |
| GTGGAATGGGATGGAAGATG+AGG | - | Chr8:41175896-41175915 | None:intergenic | 50.0% | |
| TGAATGATTGGGGCGTGGAA+TGG | - | Chr8:41175910-41175929 | None:intergenic | 50.0% | |
| ! | AGTGGGGGTGTGGAAAGAAA+AGG | - | Chr8:41175971-41175990 | None:intergenic | 50.0% |
| !! | GTGAAGATGGATGGTGGAGT+GGG | - | Chr8:41176042-41176061 | None:intergenic | 50.0% |
| !! | TGAAGATGGATGGTGGAGTG+GGG | - | Chr8:41176041-41176060 | None:intergenic | 50.0% |
| !!! | CTTTTGCTCGCTGGCTTTGT+CGG | - | Chr8:41176088-41176107 | None:intergenic | 50.0% |
| !!! | TTTTGCTCGCTGGCTTTGTC+GGG | - | Chr8:41176087-41176106 | None:intergenic | 50.0% |
| ACGGAACATGCCGTTAGGGA+GGG | - | Chr8:41176139-41176158 | None:intergenic | 55.0% | |
| CGAACACGGAACATGCCGTT+AGG | - | Chr8:41176144-41176163 | None:intergenic | 55.0% | |
| GAGACGGTGAAGATGGATGG+TGG | - | Chr8:41176048-41176067 | None:intergenic | 55.0% | |
| GAGCAAAAGTGGGTCCACGA+AGG | + | Chr8:41176099-41176118 | MsG0880044387.01.T01:CDS | 55.0% | |
| GATGGTGAATGATTGGGGCG+TGG | - | Chr8:41175915-41175934 | None:intergenic | 55.0% | |
| TTTGTCGGGGGTTGAGGACT+TGG | - | Chr8:41176073-41176092 | None:intergenic | 55.0% | |
| ! | ATGGTGGAGTGGGGTTTAGG+GGG | - | Chr8:41176032-41176051 | None:intergenic | 55.0% |
| ! | ATTGGGTAGAGGGTTGGCGA+TGG | - | Chr8:41175933-41175952 | None:intergenic | 55.0% |
| !! | GATGGTGGAGTGGGGTTTAG+GGG | - | Chr8:41176033-41176052 | None:intergenic | 55.0% |
| !! | GGATGGTGGAGTGGGGTTTA+GGG | - | Chr8:41176034-41176053 | None:intergenic | 55.0% |
| !! | GGTGAAGATGGATGGTGGAG+TGG | - | Chr8:41176043-41176062 | None:intergenic | 55.0% |
| !! | TGGATGGTGGAGTGGGGTTT+AGG | - | Chr8:41176035-41176054 | None:intergenic | 55.0% |
| !! | TTTGCTCGCTGGCTTTGTCG+GGG | - | Chr8:41176086-41176105 | None:intergenic | 55.0% |
| CACGGAACATGCCGTTAGGG+AGG | - | Chr8:41176140-41176159 | None:intergenic | 60.0% | |
| CTTGGCGGAGACGGTGAAGA+TGG | - | Chr8:41176055-41176074 | None:intergenic | 60.0% | |
| GAAAGTGGAGAGTGGGGGTG+TGG | - | Chr8:41175981-41176000 | None:intergenic | 60.0% | |
| GATTGGGGCGTGGAATGGGA+TGG | - | Chr8:41175905-41175924 | None:intergenic | 60.0% | |
| GCGGAGACGGTGAAGATGGA+TGG | - | Chr8:41176051-41176070 | None:intergenic | 60.0% | |
| GGAAGGATGGGGTGCGAAAG+TGG | - | Chr8:41175996-41176015 | None:intergenic | 60.0% | |
| GGGGTGCGAAAGTGGAGAGT+GGG | - | Chr8:41175988-41176007 | None:intergenic | 60.0% | |
| GGGTGCGAAAGTGGAGAGTG+GGG | - | Chr8:41175987-41176006 | None:intergenic | 60.0% | |
| GGTGCGAAAGTGGAGAGTGG+GGG | - | Chr8:41175986-41176005 | None:intergenic | 60.0% | |
| GGTTGAGGACTTGGCGGAGA+CGG | - | Chr8:41176064-41176083 | None:intergenic | 60.0% | |
| TGGGGTGCGAAAGTGGAGAG+TGG | - | Chr8:41175989-41176008 | None:intergenic | 60.0% | |
| TGGGGTTTAGGGGGGATGGT+GGG | - | Chr8:41176023-41176042 | None:intergenic | 60.0% | |
| TGGTGGAGTGGGGTTTAGGG+GGG | - | Chr8:41176031-41176050 | None:intergenic | 60.0% | |
| !! | ATGGTGGGCGGAGGAAGGAT+GGG | - | Chr8:41176008-41176027 | None:intergenic | 60.0% |
| !! | GTGGACCCACTTTTGCTCGC+TGG | - | Chr8:41176097-41176116 | None:intergenic | 60.0% |
| !! | TTGCTCGCTGGCTTTGTCGG+GGG | - | Chr8:41176085-41176104 | None:intergenic | 60.0% |
| GGAGTGGGGTTTAGGGGGGA+TGG | - | Chr8:41176027-41176046 | None:intergenic | 65.0% | |
| GTCGGGGGTTGAGGACTTGG+CGG | - | Chr8:41176070-41176089 | None:intergenic | 65.0% | |
| GTGGGGTTTAGGGGGGATGG+TGG | - | Chr8:41176024-41176043 | None:intergenic | 65.0% | |
| ! | TGGTGGGCGGAGGAAGGATG+GGG | - | Chr8:41176007-41176026 | None:intergenic | 65.0% |
| !! | GATGGTGGGCGGAGGAAGGA+TGG | - | Chr8:41176009-41176028 | None:intergenic | 65.0% |
| !! | GCTGGCTTTGTCGGGGGTTG+AGG | - | Chr8:41176079-41176098 | None:intergenic | 65.0% |
| !! | GGTTTAGGGGGGATGGTGGG+CGG | - | Chr8:41176020-41176039 | None:intergenic | 65.0% |
| !! | TTAGGGGGGATGGTGGGCGG+AGG | - | Chr8:41176017-41176036 | None:intergenic | 70.0% |
| !! | GGGGGATGGTGGGCGGAGGA+AGG | - | Chr8:41176013-41176032 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr8 | gene | 41175886 | 41176336 | 41175886 | ID=MsG0880044387.01;Name=MsG0880044387.01 |
| Chr8 | mRNA | 41175886 | 41176332 | 41175886 | ID=MsG0880044387.01.T01;Parent=MsG0880044387.01;Name=MsG0880044387.01.T01;_AED=0.50;_eAED=0.50;_QI=0|-1|0|1|-1|0|1|0|148 |
| Chr8 | exon | 41175886 | 41176332 | 41175886 | ID=MsG0880044387.01.T01:exon:39379;Parent=MsG0880044387.01.T01 |
| Chr8 | CDS | 41175886 | 41176332 | 41175886 | ID=MsG0880044387.01.T01:cds;Parent=MsG0880044387.01.T01 |
| Chr8 | mRNA | 41176150 | 41176332 | 41176150 | ID=MsG0880044387.01.T02;Parent=MsG0880044387.01;Name=MsG0880044387.01.T02;_AED=0.50;_eAED=0.50;_QI=0|-1|0|1|-1|0|1|0|60 |
| Chr8 | exon | 41176150 | 41176332 | 41176150 | ID=MsG0880044387.01.T02:exon:39380;Parent=MsG0880044387.01.T02 |
| Chr8 | CDS | 41176150 | 41176332 | 41176150 | ID=MsG0880044387.01.T02:cds;Parent=MsG0880044387.01.T02 |
| Chr8 | mRNA | 41176172 | 41176336 | 41176172 | ID=MsG0880044387.01.T03;Parent=MsG0880044387.01;Name=MsG0880044387.01.T03;_AED=0.50;_eAED=0.50;_QI=0|-1|0|1|-1|0|1|0|54 |
| Chr8 | exon | 41176172 | 41176336 | 41176172 | ID=MsG0880044387.01.T03:exon:39381;Parent=MsG0880044387.01.T03 |
| Chr8 | CDS | 41176172 | 41176336 | 41176172 | ID=MsG0880044387.01.T03:cds;Parent=MsG0880044387.01.T03 |
| Chr8 | mRNA | 41176268 | 41176336 | 41176268 | ID=MsG0880044387.01.T04;Parent=MsG0880044387.01;Name=MsG0880044387.01.T04;_AED=0.50;_eAED=0.50;_QI=0|-1|0|1|-1|0|1|0|22 |
| Chr8 | exon | 41176268 | 41176336 | 41176268 | ID=MsG0880044387.01.T04:exon:39382;Parent=MsG0880044387.01.T04 |
| Chr8 | CDS | 41176268 | 41176336 | 41176268 | ID=MsG0880044387.01.T04:cds;Parent=MsG0880044387.01.T04 |
| Gene Sequence |
| Protein sequence |
