AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380016456.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380016456.01.T01 MTR_3g089890 94.606 241 13 0 59 299 28 268 5.09e-168 467
MsG0380016456.01.T01 MTR_6g018710 87.097 62 8 0 189 250 72 133 1.44e-32 117
MsG0380016456.01.T01 MTR_7g088880 32.099 162 89 6 154 298 102 259 6.24e-19 84.7
MsG0380016456.01.T01 MTR_3g089900 39.496 119 45 4 30 123 28 144 2.41e-14 69.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380016456.01.T01 AT1G77090 77.232 224 46 2 80 299 38 260 9.93e-126 359
MsG0380016456.01.T01 AT3G56650 30.247 162 92 6 154 298 105 262 2.53e-17 80.5

Find 87 sgRNAs with CRISPR-Local

Find 306 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCATTCTTGAGGCACTTTAA+AGG 0.210920 3:+83799650 None:intergenic
TTAAAGGTGTATGGAATAAT+AGG 0.298400 3:+83799666 None:intergenic
GGTGAACAGAAGAGCAGTTT+TGG 0.313029 3:-83801203 MsG0380016456.01.T01:CDS
GCTTCTGGAGTTTCCTTGTT+GGG 0.353626 3:-83801181 MsG0380016456.01.T01:CDS
GGCTTCTGGAGTTTCCTTGT+TGG 0.366718 3:-83801182 MsG0380016456.01.T01:CDS
TGTCCTCCTGATTTCTCATC+TGG 0.374249 3:+83799705 None:intergenic
CTATACTTGTTTGGTGTAAC+CGG 0.376509 3:-83798968 MsG0380016456.01.T01:CDS
CTTCTAGCAGGGAGAATTCC+TGG 0.384668 3:-83801121 MsG0380016456.01.T01:CDS
TGAGGCACTTTAAAGGTGTA+TGG 0.385118 3:+83799657 None:intergenic
TTCATTACGGCCACCGCTGC+TGG 0.392527 3:-83798998 MsG0380016456.01.T01:CDS
TTGTTTGGTGTAACCGGTAA+TGG 0.408086 3:-83798962 MsG0380016456.01.T01:intron
TTACATTGTTATGCTTAGGC+AGG 0.414782 3:-83798604 MsG0380016456.01.T01:three_prime_UTR
GGCAACCGCCTATACTTGTT+TGG 0.416295 3:-83798977 MsG0380016456.01.T01:CDS
ACAATGTAACAAAACTGTTA+TGG 0.423744 3:+83798618 None:intergenic
GACAAAGTGATCAGTGCATT+TGG 0.425180 3:-83799127 MsG0380016456.01.T01:CDS
GTTAACGAACCTTGTTCATC+TGG 0.425267 3:+83801088 None:intergenic
ATGAGTAAACATACCATTAC+CGG 0.428524 3:+83798949 None:intergenic
CGGATAAATATATAGGAGTA+TGG 0.428546 3:-83802741 MsG0380016456.01.T01:CDS
AATGCACTGATCACTTTGTC+TGG 0.429585 3:+83799130 None:intergenic
CGCAGGCCAGATGAGAAATC+AGG 0.439964 3:-83799711 MsG0380016456.01.T01:CDS
TGCTTCTCTGCCAACAATAG+TGG 0.441636 3:+83802672 None:intergenic
TGATAAATGTTCATCTTTGT+TGG 0.447757 3:-83801224 MsG0380016456.01.T01:CDS
TCTCTAAAGACCACTATTGT+TGG 0.448256 3:-83802682 MsG0380016456.01.T01:CDS
TTACCCTACCCATACCCAAC+GGG 0.448493 3:+83802764 None:intergenic
CGGTTACACCAAACAAGTAT+AGG 0.450219 3:+83798969 None:intergenic
CCTTTAAAGTGCCTCAAGAA+TGG 0.454989 3:-83799650 MsG0380016456.01.T01:CDS
CCAAGATCTGCTATTGATAC+AGG 0.460727 3:+83799371 None:intergenic
TCCAGGAGTGAGTTTGGCTG+TGG 0.472811 3:-83801155 MsG0380016456.01.T01:CDS
AAATATATAGGAGTATGGTA+TGG 0.474695 3:-83802736 MsG0380016456.01.T01:CDS
CATCCCCGTTGGGTATGGGT+AGG 0.476643 3:-83802768 MsG0380016456.01.T01:CDS
CTTTAAAGTGCCTCAAGAAT+GGG 0.477276 3:-83799649 MsG0380016456.01.T01:CDS
AGGAGTATGGTATGGGGACG+AGG 0.484334 3:-83802728 MsG0380016456.01.T01:CDS
GCATTTGGTCCTGAAATGAT+TGG 0.486722 3:-83799112 MsG0380016456.01.T01:CDS
AATATATAGGAGTATGGTAT+GGG 0.493493 3:-83802735 MsG0380016456.01.T01:CDS
ACCACAGCCAAACTCACTCC+TGG 0.493815 3:+83801154 None:intergenic
GTTAAACAAGGTCTTCTAGC+AGG 0.494158 3:-83801133 MsG0380016456.01.T01:CDS
GATTCACAGAAATCCCAATC+AGG 0.494640 3:+83798680 None:intergenic
CCTGTATCAATAGCAGATCT+TGG 0.502162 3:-83799371 MsG0380016456.01.T01:CDS
CCATCGGAGAATCTAAGAAC+AGG 0.502404 3:+83799284 None:intergenic
AACTTACTATCAGTTTGAGC+TGG 0.504221 3:-83799035 MsG0380016456.01.T01:CDS
AGGGTAACGGATAAATATAT+AGG 0.506433 3:-83802748 MsG0380016456.01.T01:CDS
ATAGAACAAACGAGGGTGAA+TGG 0.514249 3:-83802598 MsG0380016456.01.T01:intron
ATCCCCGTTGGGTATGGGTA+GGG 0.518500 3:-83802767 MsG0380016456.01.T01:CDS
GTATGGTATGGGGACGAGGA+AGG 0.521388 3:-83802724 MsG0380016456.01.T01:CDS
TGTAGTGTCTCTTCCACTGA+AGG 0.524498 3:+83798829 None:intergenic
CAGGAGGACATGGTGTTGGA+TGG 0.529020 3:-83799692 MsG0380016456.01.T01:CDS
TAGGCGGTTGCCAGCAGCGG+TGG 0.539049 3:+83798988 None:intergenic
CAGACGTCCTTCCTTAGAGC+TGG 0.541704 3:+83799322 None:intergenic
TCAAATGTTGCAGAACATGA+AGG 0.543778 3:-83799061 MsG0380016456.01.T01:CDS
TGGAGAAAATGTGGAAGGGA+AGG 0.549881 3:-83799092 MsG0380016456.01.T01:CDS
TACATTGTTATGCTTAGGCA+GGG 0.550256 3:-83798603 MsG0380016456.01.T01:three_prime_UTR
TCTTAATTGCAGGCCTTCAG+TGG 0.551749 3:-83798842 MsG0380016456.01.T01:intron
AAACTGTTATGGTATATTGA+AGG 0.553878 3:+83798629 None:intergenic
GTTGGGTATGGGTAGGGTAA+CGG 0.556948 3:-83802761 MsG0380016456.01.T01:CDS
TTTGTTACATTGTTATGCTT+AGG 0.563767 3:-83798608 MsG0380016456.01.T01:three_prime_UTR
TGAAATGATTGGAGAAAATG+TGG 0.574438 3:-83799101 MsG0380016456.01.T01:CDS
GTGGCCGTAATGAAAATATG+AGG 0.575485 3:+83799007 None:intergenic
AAATCAGGAGGACATGGTGT+TGG 0.577495 3:-83799696 MsG0380016456.01.T01:CDS
ATCACCTCTTCCCATTCTTG+AGG 0.579716 3:+83799639 None:intergenic
CACTCCTGGAAAACCCAACA+AGG 0.583287 3:+83801168 None:intergenic
CAGGTTGGAGGACATATCGC+AGG 0.585205 3:-83799728 MsG0380016456.01.T01:CDS
GTATCAATAGCAGATCTTGG+TGG 0.585808 3:-83799368 MsG0380016456.01.T01:CDS
TGTGCATGCTTCAGTCTCAA+AGG 0.591583 3:-83801272 MsG0380016456.01.T01:intron
TCCCAATCAGGAAAAGTAGT+GGG 0.596078 3:+83798692 None:intergenic
CTGTCTGAGCCAGATGAACA+AGG 0.596600 3:-83801097 MsG0380016456.01.T01:intron
ATCCCAATCAGGAAAAGTAG+TGG 0.597996 3:+83798691 None:intergenic
GTATAGGCGGTTGCCAGCAG+CGG 0.599408 3:+83798985 None:intergenic
CAAATGTTGCAGAACATGAA+GGG 0.602320 3:-83799060 MsG0380016456.01.T01:CDS
GATGAGAAATCAGGAGGACA+TGG 0.611956 3:-83799702 MsG0380016456.01.T01:CDS
AGTTTGGCTGTGGTTAAACA+AGG 0.615204 3:-83801145 MsG0380016456.01.T01:CDS
CCTGTTCTTAGATTCTCCGA+TGG 0.616850 3:-83799284 MsG0380016456.01.T01:intron
TCATCTGGCTCAGACAGACC+AGG 0.619141 3:+83801103 None:intergenic
TTATACAACTCGAAAAGAGT+CGG 0.622471 3:+83798788 None:intergenic
ATGATTGGAGAAAATGTGGA+AGG 0.623515 3:-83799097 MsG0380016456.01.T01:CDS
AGTGCCTCAAGAATGGGAAG+AGG 0.627362 3:-83799643 MsG0380016456.01.T01:intron
TTAAACAAGGTCTTCTAGCA+GGG 0.627829 3:-83801132 MsG0380016456.01.T01:CDS
ATTGTTATGCTTAGGCAGGG+TGG 0.627880 3:-83798600 MsG0380016456.01.T01:three_prime_UTR
GCACTGATCACTTTGTCTGG+AGG 0.652054 3:+83799133 None:intergenic
TGATTGGAGAAAATGTGGAA+GGG 0.655080 3:-83799096 MsG0380016456.01.T01:CDS
GTTACCCTACCCATACCCAA+CGG 0.671592 3:+83802763 None:intergenic
GCCGTAATGAAAATATGAGG+AGG 0.673890 3:+83799010 None:intergenic
ATATATAGGAGTATGGTATG+GGG 0.680441 3:-83802734 MsG0380016456.01.T01:CDS
AGGCCAGATGAGAAATCAGG+AGG 0.693963 3:-83799708 MsG0380016456.01.T01:CDS
ATAATGTAATAGAACAAACG+AGG 0.717512 3:-83802606 MsG0380016456.01.T01:CDS
TAATGTAATAGAACAAACGA+GGG 0.719862 3:-83802605 MsG0380016456.01.T01:CDS
TTACACCAAACAAGTATAGG+CGG 0.725370 3:+83798972 None:intergenic
TACCCTACCCATACCCAACG+GGG 0.727048 3:+83802765 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAACATATATATAATTAAG+TGG - Chr3:83801065-83801084 MsG0380016456.01.T01:intron 10.0%
!! AAACATATATATAATTAAGT+GGG - Chr3:83801066-83801085 MsG0380016456.01.T01:intron 10.0%
!! ATTCTAATATTAAAAACATA+TGG + Chr3:83799363-83799382 None:intergenic 10.0%
!! GTAAAATATATTTAGTTAAT+AGG - Chr3:83800506-83800525 MsG0380016456.01.T01:intron 10.0%
!!! TATTATGCATAAATATTTTT+TGG - Chr3:83801019-83801038 MsG0380016456.01.T01:intron 10.0%
!!! TTTGAAATAAATAAATATTG+TGG - Chr3:83799783-83799802 MsG0380016456.01.T01:intron 10.0%
!! AACATATATATAATTAAGTG+GGG - Chr3:83801067-83801086 MsG0380016456.01.T01:intron 15.0%
!! AATAAAAAAATTGGGAATTT+GGG - Chr3:83800459-83800478 MsG0380016456.01.T01:intron 15.0%
!! ATAAATAAAATCATTTGCAA+CGG + Chr3:83801402-83801421 None:intergenic 15.0%
!! TAATAAAAAAATTGGGAATT+TGG - Chr3:83800458-83800477 MsG0380016456.01.T01:intron 15.0%
!! TTATTATGGAGTAAAAAAAT+GGG - Chr3:83799287-83799306 MsG0380016456.01.T01:CDS 15.0%
!! TTTATTATGGAGTAAAAAAA+TGG - Chr3:83799286-83799305 MsG0380016456.01.T01:CDS 15.0%
!!! AAATATTTTTTGGCATTTAT+TGG - Chr3:83801029-83801048 MsG0380016456.01.T01:intron 15.0%
!!! AAGAAGTGTAATAAAAAAAT+TGG - Chr3:83800450-83800469 MsG0380016456.01.T01:intron 15.0%
!!! AGAAGTGTAATAAAAAAATT+GGG - Chr3:83800451-83800470 MsG0380016456.01.T01:intron 15.0%
!!! ATCTATTTTATGATGTTTTT+AGG + Chr3:83800939-83800958 None:intergenic 15.0%
!!! ATTTCATATTTTCAATTCAT+TGG + Chr3:83802614-83802633 None:intergenic 15.0%
!!! TCAAATTTTGAAATCATAAT+GGG - Chr3:83800384-83800403 MsG0380016456.01.T01:intron 15.0%
!!! TCTAACAAGTATTTTTATTA+TGG - Chr3:83799273-83799292 MsG0380016456.01.T01:intron 15.0%
!!! TCTATTTTATGATGTTTTTA+GGG + Chr3:83800938-83800957 None:intergenic 15.0%
!!! TTCTATTACATTATCTTTTT+CGG + Chr3:83798755-83798774 None:intergenic 15.0%
!!! TTTTCCCTATATATTAAATT+CGG - Chr3:83800323-83800342 MsG0380016456.01.T01:intron 15.0%
!! AAAGGATATGAATAAAAGAT+TGG + Chr3:83799014-83799033 None:intergenic 20.0%
!! AAATTGCTCATATATAGTTA+TGG + Chr3:83800874-83800893 None:intergenic 20.0%
!! AACATAAACAACTTAGTTAA+AGG + Chr3:83799032-83799051 None:intergenic 20.0%
!! AATCTTTAATATGCAGTTAT+TGG - Chr3:83802183-83802202 MsG0380016456.01.T01:intron 20.0%
!! ACATATATATAATTAAGTGG+GGG - Chr3:83801068-83801087 MsG0380016456.01.T01:intron 20.0%
!! AGAAAGTTAAAATGAACAAA+AGG + Chr3:83802125-83802144 None:intergenic 20.0%
!! ATAACATTCATAAAAAGTAG+TGG + Chr3:83799899-83799918 None:intergenic 20.0%
!! TAAAAAAATGGGTATCTATT+GGG - Chr3:83799298-83799317 MsG0380016456.01.T01:CDS 20.0%
!! TAGAAAATAATCTTAATTGC+AGG - Chr3:83802515-83802534 MsG0380016456.01.T01:intron 20.0%
!! TATGAAGTAAAAGATATTTG+TGG + Chr3:83799838-83799857 None:intergenic 20.0%
!! TTATTTGACAATATTTCAAG+AGG - Chr3:83801193-83801212 MsG0380016456.01.T01:CDS 20.0%
!!! ATTAATCCTTCGAATTTTTT+TGG + Chr3:83799693-83799712 None:intergenic 20.0%
!!! GTCAAATTTTGAAATCATAA+TGG - Chr3:83800383-83800402 MsG0380016456.01.T01:intron 20.0%
!!! TAAGCATTATCTTTTACTAT+GGG - Chr3:83799335-83799354 MsG0380016456.01.T01:CDS 20.0%
!!! TTAAGCATTATCTTTTACTA+TGG - Chr3:83799334-83799353 MsG0380016456.01.T01:CDS 20.0%
!!! TTTTGCAACATTTTATAAAC+TGG - Chr3:83799134-83799153 MsG0380016456.01.T01:CDS 20.0%
!!! TTTTGTTCATTTTAACTTTC+TGG - Chr3:83802124-83802143 MsG0380016456.01.T01:intron 20.0%
! AAAATGAACAAAAGGAAATC+AGG + Chr3:83802117-83802136 None:intergenic 25.0%
! AAACTGTTATGGTATATTGA+AGG + Chr3:83802741-83802760 None:intergenic 25.0%
! AAATATTAACATGGAAGTTG+AGG + Chr3:83799876-83799895 None:intergenic 25.0%
! AAGTTTGAACTATGTTAACA+AGG - Chr3:83799070-83799089 MsG0380016456.01.T01:CDS 25.0%
! ACAATGTAACAAAACTGTTA+TGG + Chr3:83802752-83802771 None:intergenic 25.0%
! ACCAGTAATTATAAGTTGTA+GGG + Chr3:83800699-83800718 None:intergenic 25.0%
! ACTGGTATAAGTTAGTAAAT+CGG - Chr3:83800713-83800732 MsG0380016456.01.T01:intron 25.0%
! AGAAGGGTAAATATTAGATA+CGG - Chr3:83799559-83799578 MsG0380016456.01.T01:intron 25.0%
! AGGAAAAGGATTAAATGAAA+TGG + Chr3:83801302-83801321 None:intergenic 25.0%
! ATAATGTAATAGAACAAACG+AGG - Chr3:83798761-83798780 MsG0380016456.01.T01:three_prime_UTR 25.0%
! ATATATGAGCAATTTCAGAA+CGG - Chr3:83800879-83800898 MsG0380016456.01.T01:intron 25.0%
! ATCATAAAATAGATATGCAC+GGG - Chr3:83800945-83800964 MsG0380016456.01.T01:intron 25.0%
! ATTAACATCAAGTCTACAAA+TGG + Chr3:83801514-83801533 None:intergenic 25.0%
! ATTATTACACATATGGTTCA+AGG - Chr3:83800359-83800378 MsG0380016456.01.T01:intron 25.0%
! CAAGAAATTGAAACTTCAAA+TGG - Chr3:83801457-83801476 MsG0380016456.01.T01:intron 25.0%
! CATCATAAAATAGATATGCA+CGG - Chr3:83800944-83800963 MsG0380016456.01.T01:intron 25.0%
! CATTAAAAAAATTAGCAAGC+TGG + Chr3:83801575-83801594 None:intergenic 25.0%
! GATGCTACAATAGAAAAAAT+TGG - Chr3:83802210-83802229 MsG0380016456.01.T01:intron 25.0%
! GTAAAAAAATGGGTATCTAT+TGG - Chr3:83799297-83799316 MsG0380016456.01.T01:CDS 25.0%
! TAAAAGAGAATGAAATCTCT+CGG + Chr3:83801866-83801885 None:intergenic 25.0%
! TAATGTAATAGAACAAACGA+GGG - Chr3:83798762-83798781 MsG0380016456.01.T01:three_prime_UTR 25.0%
! TACCAGTAATTATAAGTTGT+AGG + Chr3:83800700-83800719 None:intergenic 25.0%
! TGAACCATATGTGTAATAAT+CGG + Chr3:83800359-83800378 None:intergenic 25.0%
! TGATAAATGTTCATCTTTGT+TGG - Chr3:83800143-83800162 MsG0380016456.01.T01:intron 25.0%
! TTATTACACATATGGTTCAA+GGG - Chr3:83800360-83800379 MsG0380016456.01.T01:intron 25.0%
! TTGTTCACAAAAGTTCAATT+GGG - Chr3:83798832-83798851 MsG0380016456.01.T01:CDS 25.0%
! TTTGTTACATTGTTATGCTT+AGG - Chr3:83802759-83802778 MsG0380016456.01.T01:CDS 25.0%
!! AAATATATAGGAGTATGGTA+TGG - Chr3:83798631-83798650 MsG0380016456.01.T01:three_prime_UTR 25.0%
!! AAGTAGTGGAAATATTAACA+TGG + Chr3:83799885-83799904 None:intergenic 25.0%
!! AATATATAGGAGTATGGTAT+GGG - Chr3:83798632-83798651 MsG0380016456.01.T01:three_prime_UTR 25.0%
!! ACATAATACTGTTGTAGTTT+TGG - Chr3:83800773-83800792 MsG0380016456.01.T01:intron 25.0%
!! CTATGTTAACAAGGAAATTT+TGG - Chr3:83799079-83799098 MsG0380016456.01.T01:CDS 25.0%
!! TAATGCACTATCTAAAACTT+GGG - Chr3:83800623-83800642 MsG0380016456.01.T01:intron 25.0%
!! TTAAAGGTGTATGGAATAAT+AGG + Chr3:83801704-83801723 None:intergenic 25.0%
!! TTTGAAGTTTCAATTTCTTG+TGG + Chr3:83801457-83801476 None:intergenic 25.0%
!! TTTTGACCAAAAAAATTCGA+AGG - Chr3:83799684-83799703 MsG0380016456.01.T01:CDS 25.0%
!!! AAACTTAGGGATATTTTTGA+AGG - Chr3:83800537-83800556 MsG0380016456.01.T01:intron 25.0%
!!! AACTTCATTTTTAACTGAAC+AGG + Chr3:83800067-83800086 None:intergenic 25.0%
!!! ACTTCATTTTTAACTGAACA+GGG + Chr3:83800066-83800085 None:intergenic 25.0%
!!! CAAAACTTTTAGAAAACAAG+TGG + Chr3:83800487-83800506 None:intergenic 25.0%
!!! CAGCTTGCTAATTTTTTTAA+TGG - Chr3:83801573-83801592 MsG0380016456.01.T01:intron 25.0%
!!! TGCAAATCATTGTTTTGTTA+AGG + Chr3:83801364-83801383 None:intergenic 25.0%
AACATAGAGTGGACATTATT+TGG - Chr3:83801804-83801823 MsG0380016456.01.T01:intron 30.0%
AATAGGGTTGTGATAAACTT+AGG - Chr3:83800523-83800542 MsG0380016456.01.T01:intron 30.0%
AATATTTCAAGAGGACTTCT+AGG - Chr3:83801202-83801221 MsG0380016456.01.T01:CDS 30.0%
ACATAGAGTGGACATTATTT+GGG - Chr3:83801805-83801824 MsG0380016456.01.T01:intron 30.0%
AGTGGCCGAATTTAATATAT+AGG + Chr3:83800331-83800350 None:intergenic 30.0%
ATAGGGTTGTGATAAACTTA+GGG - Chr3:83800524-83800543 MsG0380016456.01.T01:intron 30.0%
ATGAGTAAACATACCATTAC+CGG + Chr3:83802421-83802440 None:intergenic 30.0%
ATTTATCAGACAAAGAGAGT+TGG + Chr3:83801260-83801279 None:intergenic 30.0%
CGGATAAATATATAGGAGTA+TGG - Chr3:83798626-83798645 MsG0380016456.01.T01:three_prime_UTR 30.0%
CTGGTATAAGTTAGTAAATC+GGG - Chr3:83800714-83800733 MsG0380016456.01.T01:intron 30.0%
CTTGTTCACAAAAGTTCAAT+TGG - Chr3:83798831-83798850 MsG0380016456.01.T01:CDS 30.0%
GAAATTGAAACTTCAAATGG+AGG - Chr3:83801460-83801479 MsG0380016456.01.T01:intron 30.0%
GAACCATATGTGTAATAATC+GGG + Chr3:83800358-83800377 None:intergenic 30.0%
GCAAATAGAAAACATGTCTT+AGG - Chr3:83799514-83799533 MsG0380016456.01.T01:intron 30.0%
GTAAAAGATATTTGTGGACT+TGG + Chr3:83799832-83799851 None:intergenic 30.0%
GTGGCCGAATTTAATATATA+GGG + Chr3:83800330-83800349 None:intergenic 30.0%
TAAACTTGTGCAATTGTAGA+TGG - Chr3:83800813-83800832 MsG0380016456.01.T01:intron 30.0%
TAAGCATACATTTGCTTAAC+AGG - Chr3:83801971-83801990 MsG0380016456.01.T01:intron 30.0%
TATATGAGCAATTTCAGAAC+GGG - Chr3:83800880-83800899 MsG0380016456.01.T01:intron 30.0%
TATTACACATATGGTTCAAG+GGG - Chr3:83800361-83800380 MsG0380016456.01.T01:intron 30.0%
TATTATGTTGCAAACTTGCA+AGG + Chr3:83800761-83800780 None:intergenic 30.0%
TCATAAAATAGATATGCACG+GGG - Chr3:83800946-83800965 MsG0380016456.01.T01:intron 30.0%
TCCCTACAACTTATAATTAC+TGG - Chr3:83800695-83800714 MsG0380016456.01.T01:intron 30.0%
TGAAATGATTGGAGAAAATG+TGG - Chr3:83802266-83802285 MsG0380016456.01.T01:intron 30.0%
TGGAGTTCCTAGTTAATAAA+CGG - Chr3:83798892-83798911 MsG0380016456.01.T01:intron 30.0%
TGGTAAAAGAAATGTGTTGA+TGG - Chr3:83801486-83801505 MsG0380016456.01.T01:intron 30.0%
TGTTCACAAAAGTTCAATTG+GGG - Chr3:83798833-83798852 MsG0380016456.01.T01:CDS 30.0%
TTATACAACTCGAAAAGAGT+CGG + Chr3:83802582-83802601 None:intergenic 30.0%
TTTACTCACATTTGATCATC+TGG - Chr3:83801897-83801916 MsG0380016456.01.T01:intron 30.0%
TTTCCCGATTATTACACATA+TGG - Chr3:83800352-83800371 MsG0380016456.01.T01:intron 30.0%
! ACATTTTCTCCAATCATTTC+AGG + Chr3:83802267-83802286 None:intergenic 30.0%
! ATATATAGGAGTATGGTATG+GGG - Chr3:83798633-83798652 MsG0380016456.01.T01:three_prime_UTR 30.0%
! CTAATGCACTATCTAAAACT+TGG - Chr3:83800622-83800641 MsG0380016456.01.T01:intron 30.0%
! GAAGCGAAAATAAGTTGAAA+TGG - Chr3:83800578-83800597 MsG0380016456.01.T01:intron 30.0%
! GAAGTATTTAGAACATAGAG+TGG - Chr3:83801793-83801812 MsG0380016456.01.T01:intron 30.0%
! TCAACACATTTCTTTTACCA+TGG + Chr3:83801486-83801505 None:intergenic 30.0%
! TGATTGCATTTTTGTCAAGA+TGG + Chr3:83799637-83799656 None:intergenic 30.0%
!! AGGGTAACGGATAAATATAT+AGG - Chr3:83798619-83798638 MsG0380016456.01.T01:three_prime_UTR 30.0%
!! CATGTTTTCTATTTGCTACA+AGG + Chr3:83799510-83799529 None:intergenic 30.0%
!! TAGGGATATTTTTGAAGGAT+CGG - Chr3:83800542-83800561 MsG0380016456.01.T01:intron 30.0%
!! TCATTGTTTTGTTAAGGTCA+AGG + Chr3:83801358-83801377 None:intergenic 30.0%
!!! AGATGGTTTTAAGACTTATC+TGG - Chr3:83800830-83800849 MsG0380016456.01.T01:intron 30.0%
!!! AGTTGAAATGGTTTTGAAAG+TGG - Chr3:83800590-83800609 MsG0380016456.01.T01:intron 30.0%
!!! ATTTTAACTTTCTGGAGACA+AGG - Chr3:83802132-83802151 MsG0380016456.01.T01:intron 30.0%
!!! CTCTTTTCGAGTTGTATAAT+TGG - Chr3:83802583-83802602 MsG0380016456.01.T01:intron 30.0%
!!! GTTGAAATGGTTTTGAAAGT+GGG - Chr3:83800591-83800610 MsG0380016456.01.T01:intron 30.0%
AACTTACTATCAGTTTGAGC+TGG - Chr3:83802332-83802351 MsG0380016456.01.T01:intron 35.0%
AATTTCTGTTCCAACTACAC+GGG + Chr3:83799734-83799753 None:intergenic 35.0%
ACGTTAAACAAGCGTTTGTT+GGG - Chr3:83798982-83799001 MsG0380016456.01.T01:CDS 35.0%
ACTACCACCACAAAATGAAA+AGG - Chr3:83801152-83801171 MsG0380016456.01.T01:CDS 35.0%
AGAGAAGCAAAAATGACTCA+TGG - Chr3:83798709-83798728 MsG0380016456.01.T01:three_prime_UTR 35.0%
AGGGTAAATATTAGATACGG+TGG - Chr3:83799562-83799581 MsG0380016456.01.T01:intron 35.0%
AGTTAATAAACGGAAGACGA+AGG - Chr3:83798902-83798921 MsG0380016456.01.T01:intron 35.0%
AGTTAGTAAATCGGGTTTAG+AGG - Chr3:83800722-83800741 MsG0380016456.01.T01:intron 35.0%
ATAGCCAACTTCTCAAATGA+AGG - Chr3:83800653-83800672 MsG0380016456.01.T01:intron 35.0%
ATAGGAAAGTAGAGTTGTTG+TGG + Chr3:83800013-83800032 None:intergenic 35.0%
ATATGAGCAATTTCAGAACG+GGG - Chr3:83800881-83800900 MsG0380016456.01.T01:intron 35.0%
ATATTAGATACGGTGGAAAG+TGG - Chr3:83799569-83799588 MsG0380016456.01.T01:intron 35.0%
ATCTGCACTCTTGTTCTTTA+AGG - Chr3:83799922-83799941 MsG0380016456.01.T01:intron 35.0%
ATGAAATCTCTCGGCTAAAA+AGG + Chr3:83801857-83801876 None:intergenic 35.0%
ATGATTGGAGAAAATGTGGA+AGG - Chr3:83802270-83802289 MsG0380016456.01.T01:intron 35.0%
ATTGTGCATTGTAGCTAAGT+GGG + Chr3:83801122-83801141 None:intergenic 35.0%
CAAATGTTGCAGAACATGAA+GGG - Chr3:83802307-83802326 MsG0380016456.01.T01:intron 35.0%
CAATTTCTGTTCCAACTACA+CGG + Chr3:83799735-83799754 None:intergenic 35.0%
CGACATTTGATATGTTAGAG+TGG + Chr3:83798954-83798973 None:intergenic 35.0%
CTACCACCACAAAATGAAAA+GGG - Chr3:83801153-83801172 MsG0380016456.01.T01:CDS 35.0%
CTAGACTATCCACAATAGAA+GGG - Chr3:83799228-83799247 MsG0380016456.01.T01:intron 35.0%
CTCATGAAGCAAGTTTAGAA+GGG - Chr3:83799543-83799562 MsG0380016456.01.T01:intron 35.0%
CTGTTAAGTTCAGTCTCAAA+TGG - Chr3:83801766-83801785 MsG0380016456.01.T01:intron 35.0%
CTTACCTTCATTTGAGAAGT+TGG + Chr3:83800660-83800679 None:intergenic 35.0%
CTTATCTGGTGAGCTTAAAT+AGG - Chr3:83800844-83800863 MsG0380016456.01.T01:intron 35.0%
GTGTAATAATCGGGAAAAAG+TGG + Chr3:83800349-83800368 None:intergenic 35.0%
GTTAGTAAATCGGGTTTAGA+GGG - Chr3:83800723-83800742 MsG0380016456.01.T01:intron 35.0%
GTTCACAAAAGTTCAATTGG+GGG - Chr3:83798834-83798853 MsG0380016456.01.T01:intron 35.0%
GTTGCATTAATTCAATGCCA+AGG + Chr3:83800425-83800444 None:intergenic 35.0%
GTTGGATATACATGTGTTGT+GGG + Chr3:83800044-83800063 None:intergenic 35.0%
TACATTGTTATGCTTAGGCA+GGG - Chr3:83802764-83802783 MsG0380016456.01.T01:CDS 35.0%
TACCACCACAAAATGAAAAG+GGG - Chr3:83801154-83801173 MsG0380016456.01.T01:CDS 35.0%
TCAAATGTTGCAGAACATGA+AGG - Chr3:83802306-83802325 MsG0380016456.01.T01:intron 35.0%
TCATCTCTACCTCGAATTAA+TGG - Chr3:83798872-83798891 MsG0380016456.01.T01:intron 35.0%
TCGTCTTCCGTTTATTAACT+AGG + Chr3:83798902-83798921 None:intergenic 35.0%
TGAAATCTCTCGGCTAAAAA+GGG + Chr3:83801856-83801875 None:intergenic 35.0%
TGATTGGAGAAAATGTGGAA+GGG - Chr3:83802271-83802290 MsG0380016456.01.T01:intron 35.0%
TTAAACAAGGTCTTCTAGCA+GGG - Chr3:83800235-83800254 MsG0380016456.01.T01:intron 35.0%
TTACACCAAACAAGTATAGG+CGG + Chr3:83802398-83802417 None:intergenic 35.0%
TTACATTGTTATGCTTAGGC+AGG - Chr3:83802763-83802782 MsG0380016456.01.T01:CDS 35.0%
TTAGATACCGCGTCTTTAAA+AGG + Chr3:83799258-83799277 None:intergenic 35.0%
! GCCTCCTCATATTTTCATTA+CGG - Chr3:83802356-83802375 MsG0380016456.01.T01:intron 35.0%
! GGCTAAAAGTCTCATTTTAC+CGG + Chr3:83799201-83799220 None:intergenic 35.0%
! TACTTCATAACCTTAGCCTT+TGG - Chr3:83799849-83799868 MsG0380016456.01.T01:intron 35.0%
! TAGTAAGTTTTTGACCAGAC+AGG - Chr3:83801620-83801639 MsG0380016456.01.T01:intron 35.0%
! TCTCTAAAGACCACTATTGT+TGG - Chr3:83798685-83798704 MsG0380016456.01.T01:three_prime_UTR 35.0%
! TTTTGGCATTTATTGGTCAC+AGG - Chr3:83801036-83801055 MsG0380016456.01.T01:intron 35.0%
!! ATCATAATGGGTTACCTAAC+AGG - Chr3:83800396-83800415 MsG0380016456.01.T01:intron 35.0%
!! CATTTTTAACTGAACAGGGT+TGG + Chr3:83800062-83800081 None:intergenic 35.0%
!! CTATACTTGTTTGGTGTAAC+CGG - Chr3:83802399-83802418 MsG0380016456.01.T01:intron 35.0%
!! CTTTAAAGTGCCTCAAGAAT+GGG - Chr3:83801718-83801737 MsG0380016456.01.T01:intron 35.0%
!! TCATAATGGGTTACCTAACA+GGG - Chr3:83800397-83800416 MsG0380016456.01.T01:intron 35.0%
!! TTTGAGATTTTCCAGCTCTA+AGG - Chr3:83802034-83802053 MsG0380016456.01.T01:intron 35.0%
!! TTTGATTTTTCATCCCCGTT+GGG - Chr3:83798589-83798608 MsG0380016456.01.T01:three_prime_UTR 35.0%
!!! TTTTGATTTTTCATCCCCGT+TGG - Chr3:83798588-83798607 MsG0380016456.01.T01:three_prime_UTR 35.0%
AAAGGAAGACCCTTCTATTG+TGG + Chr3:83799240-83799259 None:intergenic 40.0%
AAATCAGGCTAACTCACCAT+CGG + Chr3:83802102-83802121 None:intergenic 40.0%
AAGCACATCATCAATCTTCG+TGG - Chr3:83799969-83799988 MsG0380016456.01.T01:intron 40.0%
AAGGATCGGTAAGAATGAGA+GGG - Chr3:83800556-83800575 MsG0380016456.01.T01:intron 40.0%
AAGTAGAGTTGTTGTGGACA+AGG + Chr3:83800007-83800026 None:intergenic 40.0%
ACAAAGAGAGTTGGCATAGA+AGG + Chr3:83801251-83801270 None:intergenic 40.0%
ACTCACATTTGATCATCTGG+AGG - Chr3:83801900-83801919 MsG0380016456.01.T01:intron 40.0%
AGTTTGGCTGTGGTTAAACA+AGG - Chr3:83800222-83800241 MsG0380016456.01.T01:intron 40.0%
ATAGAACAAACGAGGGTGAA+TGG - Chr3:83798769-83798788 MsG0380016456.01.T01:exon 40.0%
ATCATCAATCTTCGTGGACA+TGG - Chr3:83799975-83799994 MsG0380016456.01.T01:intron 40.0%
ATCCCAATCAGGAAAAGTAG+TGG + Chr3:83802679-83802698 None:intergenic 40.0%
CAAAATGAAAAGGGGTCACT+AGG - Chr3:83801162-83801181 MsG0380016456.01.T01:CDS 40.0%
CATTGTGCATTGTAGCTAAG+TGG + Chr3:83801123-83801142 None:intergenic 40.0%
CCAAGATCTGCTATTGATAC+AGG + Chr3:83801999-83802018 None:intergenic 40.0%
CCTAGACTATCCACAATAGA+AGG - Chr3:83799227-83799246 MsG0380016456.01.T01:intron 40.0%
CCTCATGAAGCAAGTTTAGA+AGG - Chr3:83799542-83799561 MsG0380016456.01.T01:intron 40.0%
CCTGTATCAATAGCAGATCT+TGG - Chr3:83801996-83802015 MsG0380016456.01.T01:intron 40.0%
CCTTCTATTGTGGATAGTCT+AGG + Chr3:83799230-83799249 None:intergenic 40.0%
CGGTTACACCAAACAAGTAT+AGG + Chr3:83802401-83802420 None:intergenic 40.0%
CTAGGAACTCCATTAATTCG+AGG + Chr3:83798884-83798903 None:intergenic 40.0%
CTTATATTGACCCGTGTAGT+TGG - Chr3:83799721-83799740 MsG0380016456.01.T01:CDS 40.0%
GACAAAGTGATCAGTGCATT+TGG - Chr3:83802240-83802259 MsG0380016456.01.T01:intron 40.0%
GACGTTAAACAAGCGTTTGT+TGG - Chr3:83798981-83799000 MsG0380016456.01.T01:CDS 40.0%
GATTCACAGAAATCCCAATC+AGG + Chr3:83802690-83802709 None:intergenic 40.0%
GCAACGAATGCTTAAGGAAA+AGG + Chr3:83801316-83801335 None:intergenic 40.0%
GCATTTGGTCCTGAAATGAT+TGG - Chr3:83802255-83802274 MsG0380016456.01.T01:intron 40.0%
GCCGTAATGAAAATATGAGG+AGG + Chr3:83802360-83802379 None:intergenic 40.0%
GGTTGGATATACATGTGTTG+TGG + Chr3:83800045-83800064 None:intergenic 40.0%
GTATCAATAGCAGATCTTGG+TGG - Chr3:83801999-83802018 MsG0380016456.01.T01:intron 40.0%
GTGGCCGTAATGAAAATATG+AGG + Chr3:83802363-83802382 None:intergenic 40.0%
GTGTTGTGGGTTTCTTCTAT+AGG + Chr3:83800031-83800050 None:intergenic 40.0%
GTTAAACAAGGTCTTCTAGC+AGG - Chr3:83800234-83800253 MsG0380016456.01.T01:intron 40.0%
GTTAACGAACCTTGTTCATC+TGG + Chr3:83800282-83800301 None:intergenic 40.0%
TCCCAATCAGGAAAAGTAGT+GGG + Chr3:83802678-83802697 None:intergenic 40.0%
TGTGGATAGTCTAGGCTAAT+AGG + Chr3:83799222-83799241 None:intergenic 40.0%
TGTGGATTCACACATCATAG+TGG - Chr3:83799801-83799820 MsG0380016456.01.T01:intron 40.0%
TTGTGCATTGTAGCTAAGTG+GGG + Chr3:83801121-83801140 None:intergenic 40.0%
TTGTTTATGACAGTGCAGAC+TGG + Chr3:83802469-83802488 None:intergenic 40.0%
TTTGTTAAGGTCAAGGTGAC+AGG + Chr3:83801351-83801370 None:intergenic 40.0%
! AAGTTTTTGACCAGACAGGT+TGG - Chr3:83801624-83801643 MsG0380016456.01.T01:intron 40.0%
! AATGCACTGATCACTTTGTC+TGG + Chr3:83802240-83802259 None:intergenic 40.0%
! AGTGACCCCTTTTCATTTTG+TGG + Chr3:83801162-83801181 None:intergenic 40.0%
! CCATTCTTGAGGCACTTTAA+AGG + Chr3:83801720-83801739 None:intergenic 40.0%
! CCTTCTAAACTTGCTTCATG+AGG + Chr3:83799545-83799564 None:intergenic 40.0%
! TGAGGCACTTTAAAGGTGTA+TGG + Chr3:83801713-83801732 None:intergenic 40.0%
! TGCACTCTTGTTCTTTAAGG+TGG - Chr3:83799925-83799944 MsG0380016456.01.T01:intron 40.0%
! TTAAACAAGCGTTTGTTGGG+AGG - Chr3:83798985-83799004 MsG0380016456.01.T01:CDS 40.0%
!! CCTTTAAAGTGCCTCAAGAA+TGG - Chr3:83801717-83801736 MsG0380016456.01.T01:intron 40.0%
!! TCCCACTACTTTTCCTGATT+GGG - Chr3:83802674-83802693 MsG0380016456.01.T01:CDS 40.0%
!! TTCCCACTACTTTTCCTGAT+TGG - Chr3:83802673-83802692 MsG0380016456.01.T01:CDS 40.0%
!! TTGTTTGGTGTAACCGGTAA+TGG - Chr3:83802405-83802424 MsG0380016456.01.T01:intron 40.0%
!!! AGATTTTCCAGCTCTAAGGA+AGG - Chr3:83802038-83802057 MsG0380016456.01.T01:intron 40.0%
AAACGGAAGACGAAGGATGA+TGG - Chr3:83798909-83798928 MsG0380016456.01.T01:intron 45.0%
AAATCAGGAGGACATGGTGT+TGG - Chr3:83801671-83801690 MsG0380016456.01.T01:intron 45.0%
AACGAGGGTGAATGGTAACA+AGG - Chr3:83798777-83798796 MsG0380016456.01.T01:exon 45.0%
AACGGAAGACGAAGGATGAT+GGG - Chr3:83798910-83798929 MsG0380016456.01.T01:intron 45.0%
AAGTTGAGGTCCAAAGGCTA+AGG + Chr3:83799862-83799881 None:intergenic 45.0%
AATCTCTCGGCTAAAAAGGG+AGG + Chr3:83801853-83801872 None:intergenic 45.0%
AATTCGAGGTAGAGATGACG+TGG + Chr3:83798870-83798889 None:intergenic 45.0%
ACATGGAAGTTGAGGTCCAA+AGG + Chr3:83799868-83799887 None:intergenic 45.0%
ATCACCTCTTCCCATTCTTG+AGG + Chr3:83801731-83801750 None:intergenic 45.0%
ATTCGAGGTAGAGATGACGT+GGG + Chr3:83798869-83798888 None:intergenic 45.0%
ATTGTTATGCTTAGGCAGGG+TGG - Chr3:83802767-83802786 MsG0380016456.01.T01:CDS 45.0%
CACAAAAGTTCAATTGGGGG+AGG - Chr3:83798837-83798856 MsG0380016456.01.T01:intron 45.0%
CCATCGGAGAATCTAAGAAC+AGG + Chr3:83802086-83802105 None:intergenic 45.0%
CCTGTTCTTAGATTCTCCGA+TGG - Chr3:83802083-83802102 MsG0380016456.01.T01:intron 45.0%
GAAACTTCAAATGGAGGCCA+TGG - Chr3:83801466-83801485 MsG0380016456.01.T01:intron 45.0%
GAAGGATCGGTAAGAATGAG+AGG - Chr3:83800555-83800574 MsG0380016456.01.T01:intron 45.0%
GATGAGAAATCAGGAGGACA+TGG - Chr3:83801665-83801684 MsG0380016456.01.T01:intron 45.0%
GGTCAAGATCAACAGAGTCA+TGG - Chr3:83798798-83798817 MsG0380016456.01.T01:CDS 45.0%
TCTGGTGCAACGAATGCTTA+AGG + Chr3:83801322-83801341 None:intergenic 45.0%
TCTTAATTGCAGGCCTTCAG+TGG - Chr3:83802525-83802544 MsG0380016456.01.T01:intron 45.0%
TGCTTCTCTGCCAACAATAG+TGG + Chr3:83798698-83798717 None:intergenic 45.0%
TGGAGAAAATGTGGAAGGGA+AGG - Chr3:83802275-83802294 MsG0380016456.01.T01:intron 45.0%
TGTAGTGTCTCTTCCACTGA+AGG + Chr3:83802541-83802560 None:intergenic 45.0%
TGTCCTCCTGATTTCTCATC+TGG + Chr3:83801665-83801684 None:intergenic 45.0%
TGTGCATGCTTCAGTCTCAA+AGG - Chr3:83800095-83800114 MsG0380016456.01.T01:intron 45.0%
! CAGAACGGGGTCTTATATAC+AGG - Chr3:83800894-83800913 MsG0380016456.01.T01:intron 45.0%
! GACCCCTTTTCATTTTGTGG+TGG + Chr3:83801159-83801178 None:intergenic 45.0%
! GGTGAACAGAAGAGCAGTTT+TGG - Chr3:83800164-83800183 MsG0380016456.01.T01:intron 45.0%
! GTTTCCTTGTTGGGTTTTCC+AGG - Chr3:83800195-83800214 MsG0380016456.01.T01:intron 45.0%
! TTTTCATCCCCGTTGGGTAT+GGG - Chr3:83798595-83798614 MsG0380016456.01.T01:three_prime_UTR 45.0%
! TTTTTCATCCCCGTTGGGTA+TGG - Chr3:83798594-83798613 MsG0380016456.01.T01:three_prime_UTR 45.0%
!! GCTTCTGGAGTTTCCTTGTT+GGG - Chr3:83800186-83800205 MsG0380016456.01.T01:intron 45.0%
!! GGGTCTTCCTTTTAAAGACG+CGG - Chr3:83799248-83799267 MsG0380016456.01.T01:intron 45.0%
!! TTTTTGACCAGACAGGTTGG+AGG - Chr3:83801627-83801646 MsG0380016456.01.T01:intron 45.0%
!!! AGAAGAGCAGTTTTGGCTTC+TGG - Chr3:83800171-83800190 MsG0380016456.01.T01:intron 45.0%
!! TAAAATATATTTAGTTAATA+GGG - Chr3:83800507-83800526 MsG0380016456.01.T01:intron 5.0%
!! TTATTAAGAAAAATATAATT+TGG + Chr3:83799951-83799970 None:intergenic 5.0%
AGGCCAGATGAGAAATCAGG+AGG - Chr3:83801659-83801678 MsG0380016456.01.T01:intron 50.0%
AGTGCCTCAAGAATGGGAAG+AGG - Chr3:83801724-83801743 MsG0380016456.01.T01:intron 50.0%
CAAGGTGACAGGAACAGTTC+TGG + Chr3:83801340-83801359 None:intergenic 50.0%
CACTCCTGGAAAACCCAACA+AGG + Chr3:83800202-83800221 None:intergenic 50.0%
CTGTCTGAGCCAGATGAACA+AGG - Chr3:83800270-83800289 MsG0380016456.01.T01:intron 50.0%
CTTCTAGCAGGGAGAATTCC+TGG - Chr3:83800246-83800265 MsG0380016456.01.T01:intron 50.0%
GAGAGTTGGCATAGAAGGCT+TGG + Chr3:83801246-83801265 None:intergenic 50.0%
GATATGTCCTCCAACCTGTC+TGG + Chr3:83801637-83801656 None:intergenic 50.0%
GGCAACCGCCTATACTTGTT+TGG - Chr3:83802390-83802409 MsG0380016456.01.T01:intron 50.0%
GTTACCCTACCCATACCCAA+CGG + Chr3:83798607-83798626 None:intergenic 50.0%
GTTGGGTATGGGTAGGGTAA+CGG - Chr3:83798606-83798625 MsG0380016456.01.T01:three_prime_UTR 50.0%
TGCTCGTCAGGCAAATTGAC+CGG - Chr3:83799179-83799198 MsG0380016456.01.T01:intron 50.0%
TTACCCTACCCATACCCAAC+GGG + Chr3:83798606-83798625 None:intergenic 50.0%
! GCACTGATCACTTTGTCTGG+AGG + Chr3:83802237-83802256 None:intergenic 50.0%
! GGGTTTTCCAGGAGTGAGTT+TGG - Chr3:83800206-83800225 MsG0380016456.01.T01:intron 50.0%
!! GGCTTCTGGAGTTTCCTTGT+TGG - Chr3:83800185-83800204 MsG0380016456.01.T01:intron 50.0%
ACCACAGCCAAACTCACTCC+TGG + Chr3:83800216-83800235 None:intergenic 55.0%
ATCCCCGTTGGGTATGGGTA+GGG - Chr3:83798600-83798619 MsG0380016456.01.T01:three_prime_UTR 55.0%
CAGACGTCCTTCCTTAGAGC+TGG + Chr3:83802048-83802067 None:intergenic 55.0%
CGCAGGCCAGATGAGAAATC+AGG - Chr3:83801656-83801675 MsG0380016456.01.T01:intron 55.0%
CTCTCGGCTAAAAAGGGAGG+AGG + Chr3:83801850-83801869 None:intergenic 55.0%
GTATGGTATGGGGACGAGGA+AGG - Chr3:83798643-83798662 MsG0380016456.01.T01:three_prime_UTR 55.0%
TACCCTACCCATACCCAACG+GGG + Chr3:83798605-83798624 None:intergenic 55.0%
TCCAGGAGTGAGTTTGGCTG+TGG - Chr3:83800212-83800231 MsG0380016456.01.T01:intron 55.0%
! AGGAGTATGGTATGGGGACG+AGG - Chr3:83798639-83798658 MsG0380016456.01.T01:three_prime_UTR 55.0%
! CAATGCCAAGGCACCCTGTT+AGG + Chr3:83800413-83800432 None:intergenic 55.0%
! CAGGAGGACATGGTGTTGGA+TGG - Chr3:83801675-83801694 MsG0380016456.01.T01:intron 55.0%
! CAGGTTGGAGGACATATCGC+AGG - Chr3:83801639-83801658 MsG0380016456.01.T01:intron 55.0%
! GGTTACCTAACAGGGTGCCT+TGG - Chr3:83800405-83800424 MsG0380016456.01.T01:intron 55.0%
! TCATCTGGCTCAGACAGACC+AGG + Chr3:83800267-83800286 None:intergenic 55.0%
AGTGCGTGCATCTGCTCGTC+AGG - Chr3:83799167-83799186 MsG0380016456.01.T01:CDS 60.0%
CATCCCCGTTGGGTATGGGT+AGG - Chr3:83798599-83798618 MsG0380016456.01.T01:three_prime_UTR 60.0%
GTATAGGCGGTTGCCAGCAG+CGG + Chr3:83802385-83802404 None:intergenic 60.0%
TTCATTACGGCCACCGCTGC+TGG - Chr3:83802369-83802388 MsG0380016456.01.T01:intron 60.0%
TAGGCGGTTGCCAGCAGCGG+TGG + Chr3:83802382-83802401 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr3 gene 83798583 83802806 83798583 ID=MsG0380016456.01;Name=MsG0380016456.01
Chr3 mRNA 83798583 83802806 83798583 ID=MsG0380016456.01.T01;Parent=MsG0380016456.01;Name=MsG0380016456.01.T01;_AED=0.49;_eAED=0.49;_QI=0|0.8|0.66|0.83|1|1|6|205|299
Chr3 exon 83798583 83798852 83798583 ID=MsG0380016456.01.T01:exon:14069;Parent=MsG0380016456.01.T01
Chr3 exon 83798963 83799190 83798963 ID=MsG0380016456.01.T01:exon:14068;Parent=MsG0380016456.01.T01
Chr3 exon 83799285 83799396 83799285 ID=MsG0380016456.01.T01:exon:14067;Parent=MsG0380016456.01.T01
Chr3 exon 83799644 83799747 83799644 ID=MsG0380016456.01.T01:exon:14066;Parent=MsG0380016456.01.T01
Chr3 exon 83801098 83801280 83801098 ID=MsG0380016456.01.T01:exon:14065;Parent=MsG0380016456.01.T01
Chr3 exon 83802599 83802806 83802599 ID=MsG0380016456.01.T01:exon:14064;Parent=MsG0380016456.01.T01
Chr3 CDS 83802599 83802806 83802599 ID=MsG0380016456.01.T01:cds;Parent=MsG0380016456.01.T01
Chr3 CDS 83801098 83801280 83801098 ID=MsG0380016456.01.T01:cds;Parent=MsG0380016456.01.T01
Chr3 CDS 83799644 83799747 83799644 ID=MsG0380016456.01.T01:cds;Parent=MsG0380016456.01.T01
Chr3 CDS 83799285 83799396 83799285 ID=MsG0380016456.01.T01:cds;Parent=MsG0380016456.01.T01
Chr3 CDS 83798963 83799190 83798963 ID=MsG0380016456.01.T01:cds;Parent=MsG0380016456.01.T01
Chr3 CDS 83798788 83798852 83798788 ID=MsG0380016456.01.T01:cds;Parent=MsG0380016456.01.T01
Chr3 three_prime_UTR 83798583 83798787 83798583 ID=MsG0380016456.01.T01:three_prime_utr;Parent=MsG0380016456.01.T01
Gene Sequence

>MsG0380016456.01.T01

ATGAGTTTTGATTTTTCATCCCCGTTGGGTATGGGTAGGGTAACGGATAAATATATAGGAGTATGGTATGGGGACGAGGAAGGTAAAACTCATCAAAGACTATCTCTAAAGACCACTATTGTTGGCAGAGAAGCAAAAATGACTCATGGAGAAGATAATGAAGTATTAGCCGAAAAAGATAATGTAATAGAACAAACGAGGGTGAATGTCTCAAAGGACAGTTTATCAATCAATGAAGAGAGTGATAAATGTTCATCTTTGTTGGTGAACAGAAGAGCAGTTTTGGCTTCTGGAGTTTCCTTGTTGGGTTTTCCAGGAGTGAGTTTGGCTGTGGTTAAACAAGGTCTTCTAGCAGGGAGAATTCCTGGTCTGTCTGAGCCAGATGAACAAGGTTGGAGGACATATCGCAGGCCAGATGAGAAATCAGGAGGACATGGTGTTGGATGGAGTCCTATTATTCCATACACCTTTAAAGTGCCTCAAGAATGGGAAGAGGTACCTGTATCAATAGCAGATCTTGGTGGAACAGAGTTAGATTTGAGATTTTCCAGCTCTAAGGAAGGACGTCTGTTTGTCATTGTTGCTCCTGTTCTTAGATTCTCCGATGTTATTGGTGATGATGCTACAATAGAAAAAATTGGACCTCCAGACAAAGTGATCAGTGCATTTGGTCCTGAAATGATTGGAGAAAATGTGGAAGGGAAGGTTCTTAGTTCAAATGTTGCAGAACATGAAGGGAGAACTTACTATCAGTTTGAGCTGGAGCCTCCTCATATTTTCATTACGGCCACCGCTGCTGGCAACCGCCTATACTTGTTTGGTGTAACCGGTAATGGCCTTCAGTGGAAGAGACACTACAATGATTTGAAGAAGATATCCGACTCTTTTCGAGTTGTATAA

Protein sequence

>MsG0380016456.01.T01

MSFDFSSPLGMGRVTDKYIGVWYGDEEGKTHQRLSLKTTIVGREAKMTHGEDNEVLAEKDNVIEQTRVNVSKDSLSINEESDKCSSLLVNRRAVLASGVSLLGFPGVSLAVVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSPIIPYTFKVPQEWEEVPVSIADLGGTELDLRFSSSKEGRLFVIVAPVLRFSDVIGDDATIEKIGPPDKVISAFGPEMIGENVEGKVLSSNVAEHEGRTYYQFELEPPHIFITATAAGNRLYLFGVTGNGLQWKRHYNDLKKISDSFRVV*