Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180005999.01.T01 | KAF5467036.1 | 61.943 | 247 | 67 | 3 | 7 | 253 | 13 | 232 | 1.06E-101 | 306 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180005999.01.T01 | F4I9E1 | 29.73 | 148 | 98 | 3 | 25 | 168 | 43 | 188 | 2.93E-11 | 66.6 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180005999.01.T01 | A0A833XH87 | 61.943 | 247 | 67 | 3 | 7 | 253 | 13 | 232 | 5.06e-102 | 306 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048178.01 | MsG0180005999.01 | 0.818477 | 1.920401e-52 | 1.439105e-49 |
| MsG0080048809.01 | MsG0180005999.01 | -0.832286 | 1.030781e-55 | 1.146806e-52 |
| MsG0080048982.01 | MsG0180005999.01 | 0.831444 | 1.663519e-55 | 1.805558e-52 |
| MsG0180000271.01 | MsG0180005999.01 | 0.818037 | 2.415996e-52 | 1.788497e-49 |
| MsG0180000797.01 | MsG0180005999.01 | 0.813608 | 2.348195e-51 | 1.540617e-48 |
| MsG0180001312.01 | MsG0180005999.01 | 0.811211 | 7.843836e-51 | 4.826380e-48 |
| MsG0180001712.01 | MsG0180005999.01 | 0.820290 | 7.416283e-53 | 5.844006e-50 |
| MsG0180001922.01 | MsG0180005999.01 | 0.817481 | 3.224084e-52 | 2.350821e-49 |
| MsG0180002140.01 | MsG0180005999.01 | 0.841907 | 3.573492e-58 | 5.328182e-55 |
| MsG0180002300.01 | MsG0180005999.01 | 0.804376 | 2.225743e-49 | 1.145780e-46 |
| MsG0180003118.01 | MsG0180005999.01 | -0.808811 | 2.578071e-50 | 1.488489e-47 |
| MsG0180003190.01 | MsG0180005999.01 | 0.801216 | 9.995813e-49 | 4.747062e-46 |
| MsG0180004599.01 | MsG0180005999.01 | 0.828735 | 7.621899e-55 | 7.640798e-52 |
| MsG0180004600.01 | MsG0180005999.01 | 0.808040 | 3.765768e-50 | 2.130638e-47 |
| MsG0180004602.01 | MsG0180005999.01 | 0.832124 | 1.130317e-55 | 1.251634e-52 |
| MsG0180004603.01 | MsG0180005999.01 | 0.819264 | 1.272395e-52 | 9.744047e-50 |
| MsG0180004684.01 | MsG0180005999.01 | 0.807113 | 5.922000e-50 | 3.270616e-47 |
| MsG0180005160.01 | MsG0180005999.01 | 0.819287 | 1.257388e-52 | 9.634725e-50 |
| MsG0180005354.01 | MsG0180005999.01 | 0.831522 | 1.591985e-55 | 1.731939e-52 |
| MsG0180005999.01 | MsG0180006050.01 | 0.827475 | 1.532788e-54 | 1.481406e-51 |
| MsG0180005999.01 | MsG0280006411.01 | 0.800826 | 1.201057e-48 | 5.647697e-46 |
| MsG0180005999.01 | MsG0280006583.01 | 0.824312 | 8.639317e-54 | 7.624264e-51 |
| MsG0180005999.01 | MsG0280006906.01 | 0.805242 | 1.467188e-49 | 7.723089e-47 |
| MsG0180005999.01 | MsG0280006935.01 | 0.830994 | 2.146365e-55 | 2.298726e-52 |
| MsG0180005999.01 | MsG0280007048.01 | 0.823760 | 1.164480e-53 | 1.011940e-50 |
| MsG0180005999.01 | MsG0280007775.01 | 0.801829 | 7.486024e-49 | 3.610648e-46 |
| MsG0180005999.01 | MsG0280010784.01 | 0.819722 | 1.000609e-52 | 7.761302e-50 |
| MsG0180005999.01 | MsG0280010816.01 | 0.812771 | 3.585817e-51 | 2.299879e-48 |
| MsG0180005999.01 | MsG0280010901.01 | 0.829864 | 4.055000e-55 | 4.202787e-52 |
| MsG0180005999.01 | MsG0280010976.01 | 0.827287 | 1.700246e-54 | 1.634310e-51 |
| MsG0180005999.01 | MsG0280011043.01 | 0.811763 | 5.950762e-51 | 3.715257e-48 |
| MsG0180005999.01 | MsG0280011235.01 | 0.810213 | 1.288737e-50 | 7.722135e-48 |
| MsG0180005999.01 | MsG0280011410.01 | 0.847661 | 1.003959e-59 | 1.797371e-56 |
| MsG0180005999.01 | MsG0380012458.01 | 0.818353 | 2.049486e-52 | 1.530618e-49 |
| MsG0180005999.01 | MsG0380014551.01 | -0.809294 | 2.031287e-50 | 1.188097e-47 |
| MsG0180005999.01 | MsG0380014913.01 | 0.803917 | 2.773370e-49 | 1.411029e-46 |
| MsG0180005999.01 | MsG0380015607.01 | 0.807626 | 4.611042e-50 | 2.580835e-47 |
| MsG0180005999.01 | MsG0380015893.01 | 0.811137 | 8.135485e-51 | 4.996225e-48 |
| MsG0180005999.01 | MsG0380016117.01 | 0.808830 | 2.553386e-50 | 1.474988e-47 |
| MsG0180005999.01 | MsG0380016223.01 | 0.807590 | 4.691707e-50 | 2.623433e-47 |
| MsG0180005999.01 | MsG0380016753.01 | 0.802876 | 4.556366e-49 | 2.256964e-46 |
| MsG0180005999.01 | MsG0380017055.01 | 0.808464 | 3.057371e-50 | 1.749378e-47 |
| MsG0180005999.01 | MsG0380017210.01 | 0.811004 | 8.693715e-51 | 5.320885e-48 |
| MsG0180005999.01 | MsG0380017229.01 | 0.838922 | 2.156364e-57 | 2.931061e-54 |
| MsG0180005999.01 | MsG0380017512.01 | 0.830558 | 2.744991e-55 | 2.902110e-52 |
| MsG0180005999.01 | MsG0380017604.01 | 0.804459 | 2.138864e-49 | 1.103380e-46 |
| MsG0180005999.01 | MsG0480018635.01 | 0.801810 | 7.553414e-49 | 3.641382e-46 |
| MsG0180005999.01 | MsG0480018847.01 | 0.811469 | 6.892725e-51 | 4.270206e-48 |
| MsG0180005999.01 | MsG0480019289.01 | 0.837601 | 4.722349e-57 | 6.165217e-54 |
| MsG0180005999.01 | MsG0480020327.01 | -0.834045 | 3.761271e-56 | 4.411187e-53 |
| MsG0180005999.01 | MsG0480020487.01 | 0.821637 | 3.632551e-53 | 2.971738e-50 |
| MsG0180005999.01 | MsG0480020719.01 | 0.815635 | 8.357884e-52 | 5.793904e-49 |
| MsG0180005999.01 | MsG0480021592.01 | 0.801484 | 8.809879e-49 | 4.212204e-46 |
| MsG0180005999.01 | MsG0480021900.01 | 0.823767 | 1.160133e-53 | 1.008375e-50 |
| MsG0180005999.01 | MsG0480022392.01 | -0.801933 | 7.126511e-49 | 3.446258e-46 |
| MsG0180005999.01 | MsG0480022451.01 | 0.802788 | 4.751599e-49 | 2.348495e-46 |
| MsG0180005999.01 | MsG0480022552.01 | 0.803822 | 2.902030e-49 | 1.472805e-46 |
| MsG0180005999.01 | MsG0480023136.01 | -0.829567 | 4.789017e-55 | 4.919731e-52 |
| MsG0180005999.01 | MsG0580024581.01 | 0.851798 | 7.018739e-61 | 1.437048e-57 |
| MsG0180005999.01 | MsG0580025009.01 | 0.825313 | 5.018755e-54 | 4.558300e-51 |
| MsG0180005999.01 | MsG0580025026.01 | 0.821352 | 4.225928e-53 | 3.429799e-50 |
| MsG0180005999.01 | MsG0580025278.01 | 0.812127 | 4.956787e-51 | 3.125310e-48 |
| MsG0180005999.01 | MsG0580025328.01 | 0.805187 | 1.506406e-49 | 7.918518e-47 |
| MsG0180005999.01 | MsG0580025520.01 | 0.814868 | 1.237127e-51 | 8.397581e-49 |
| MsG0180005999.01 | MsG0580025907.01 | 0.800090 | 1.696501e-48 | 7.829874e-46 |
| MsG0180005999.01 | MsG0580026067.01 | 0.809494 | 1.840343e-50 | 1.082115e-47 |
| MsG0180005999.01 | MsG0580026068.01 | 0.803441 | 3.481502e-49 | 1.749648e-46 |
| MsG0180005999.01 | MsG0580029639.01 | 0.806607 | 7.578438e-50 | 4.131056e-47 |
| MsG0180005999.01 | MsG0680031538.01 | 0.809061 | 2.279727e-50 | 1.325059e-47 |
| MsG0180005999.01 | MsG0680033391.01 | 0.823007 | 1.746197e-53 | 1.485425e-50 |
| MsG0180005999.01 | MsG0680034476.01 | 0.816841 | 4.491477e-52 | 3.217968e-49 |
| MsG0180005999.01 | MsG0680035582.01 | 0.808861 | 2.514843e-50 | 1.453946e-47 |
| MsG0180005999.01 | MsG0680035601.01 | 0.803822 | 2.901686e-49 | 1.472647e-46 |
| MsG0180005999.01 | MsG0780035958.01 | 0.816582 | 5.133461e-52 | 3.651784e-49 |
| MsG0180005999.01 | MsG0780036117.01 | 0.800574 | 1.352076e-48 | 6.317449e-46 |
| MsG0180005999.01 | MsG0780036630.01 | 0.800335 | 1.512679e-48 | 7.025187e-46 |
| MsG0180005999.01 | MsG0780036633.01 | 0.804249 | 2.365247e-49 | 1.213558e-46 |
| MsG0180005999.01 | MsG0780036635.01 | 0.817852 | 2.659338e-52 | 1.958827e-49 |
| MsG0180005999.01 | MsG0780036845.01 | 0.808305 | 3.306449e-50 | 1.883960e-47 |
| MsG0180005999.01 | MsG0780037975.01 | 0.802674 | 5.014869e-49 | 2.471304e-46 |
| MsG0180005999.01 | MsG0780038092.01 | 0.834126 | 3.588944e-56 | 4.219231e-53 |
| MsG0180005999.01 | MsG0780038644.01 | 0.801264 | 9.772721e-49 | 4.646740e-46 |
| MsG0180005999.01 | MsG0780038833.01 | 0.807730 | 4.382267e-50 | 2.459513e-47 |
| MsG0180005999.01 | MsG0780039405.01 | 0.802622 | 5.141833e-49 | 2.530517e-46 |
| MsG0180005999.01 | MsG0780039875.01 | 0.834585 | 2.753058e-56 | 3.281646e-53 |
| MsG0180005999.01 | MsG0780040375.01 | -0.808124 | 3.613999e-50 | 2.049379e-47 |
| MsG0180005999.01 | MsG0780040389.01 | 0.805092 | 1.577200e-49 | 8.270366e-47 |
| MsG0180005999.01 | MsG0780040679.01 | 0.817575 | 3.070741e-52 | 2.244664e-49 |
| MsG0180005999.01 | MsG0780040712.01 | 0.805345 | 1.395828e-49 | 7.367114e-47 |
| MsG0180005999.01 | MsG0780040742.01 | 0.825615 | 4.256125e-54 | 3.899061e-51 |
| MsG0180005999.01 | MsG0780040758.01 | 0.846981 | 1.543123e-59 | 2.702773e-56 |
| MsG0180005999.01 | MsG0880042223.01 | 0.817713 | 2.858310e-52 | 2.097342e-49 |
| MsG0180005999.01 | MsG0880042743.01 | 0.804766 | 1.845034e-49 | 9.594321e-47 |
| MsG0180005999.01 | MsG0880042965.01 | 0.823627 | 1.251086e-53 | 1.083053e-50 |
| MsG0180005999.01 | MsG0880043162.01 | 0.808564 | 2.911321e-50 | 1.670078e-47 |
| MsG0180005999.01 | MsG0880043341.01 | 0.832008 | 1.208024e-55 | 1.333259e-52 |
| MsG0180005999.01 | MsG0880044062.01 | -0.810396 | 1.177246e-50 | 7.087978e-48 |
| MsG0180005999.01 | MsG0880044409.01 | 0.803163 | 3.973715e-49 | 1.982876e-46 |
| MsG0180005999.01 | MsG0880044638.01 | 0.819705 | 1.009628e-52 | 7.827444e-50 |
| MsG0180005999.01 | MsG0880045756.01 | 0.809869 | 1.528532e-50 | 9.077591e-48 |
| MsG0180005999.01 | MsG0880046244.01 | 0.801828 | 7.488033e-49 | 3.611574e-46 |
| MsG0180005999.01 | MsG0880046560.01 | 0.813748 | 2.187420e-51 | 1.440509e-48 |
| MsG0180005999.01 | MsG0880047019.01 | 0.815785 | 7.738844e-52 | 5.386868e-49 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180005999.01.T01 | MTR_1g111550 | 93.939 | 165 | 10 | 0 | 1 | 165 | 1 | 165 | 1.65e-105 | 318 |
| MsG0180005999.01.T01 | MTR_1g111550 | 55.794 | 233 | 84 | 7 | 50 | 266 | 366 | 595 | 3.82e-61 | 203 |
| MsG0180005999.01.T01 | MTR_1g111540 | 76.129 | 155 | 37 | 0 | 11 | 165 | 12 | 166 | 1.74e-81 | 256 |
| MsG0180005999.01.T01 | MTR_1g111540 | 62.376 | 101 | 30 | 1 | 162 | 262 | 492 | 584 | 3.98e-33 | 127 |
| MsG0180005999.01.T01 | MTR_1g111510 | 76.129 | 155 | 37 | 0 | 11 | 165 | 12 | 166 | 1.19e-80 | 254 |
| MsG0180005999.01.T01 | MTR_1g111510 | 66.667 | 99 | 31 | 1 | 162 | 260 | 492 | 588 | 2.83e-35 | 133 |
| MsG0180005999.01.T01 | MTR_1g111530 | 75.817 | 153 | 37 | 0 | 13 | 165 | 10 | 162 | 2.33e-80 | 253 |
| MsG0180005999.01.T01 | MTR_1g111530 | 39.407 | 236 | 101 | 9 | 50 | 262 | 364 | 580 | 5.09e-32 | 124 |
| MsG0180005999.01.T01 | MTR_7g102880 | 75.000 | 152 | 38 | 0 | 14 | 165 | 18 | 169 | 8.56e-77 | 244 |
| MsG0180005999.01.T01 | MTR_7g102880 | 56.000 | 100 | 40 | 2 | 162 | 260 | 504 | 600 | 6.44e-28 | 112 |
| MsG0180005999.01.T01 | MTR_1g050550 | 72.603 | 146 | 40 | 0 | 13 | 158 | 12 | 157 | 1.74e-71 | 230 |
| MsG0180005999.01.T01 | MTR_1g050550 | 57.609 | 92 | 36 | 1 | 162 | 253 | 499 | 587 | 3.10e-28 | 113 |
| MsG0180005999.01.T01 | MTR_1g059080 | 65.068 | 146 | 51 | 0 | 13 | 158 | 12 | 157 | 3.87e-65 | 213 |
| MsG0180005999.01.T01 | MTR_1g059080 | 57.609 | 92 | 36 | 1 | 162 | 253 | 490 | 578 | 2.94e-28 | 113 |
| MsG0180005999.01.T01 | MTR_5g095240 | 84.507 | 71 | 11 | 0 | 163 | 233 | 2 | 72 | 1.23e-36 | 125 |
| MsG0180005999.01.T01 | MTR_7g029015 | 43.226 | 155 | 88 | 0 | 11 | 165 | 1 | 155 | 9.74e-35 | 131 |
| MsG0180005999.01.T01 | MTR_3g099150 | 41.844 | 141 | 82 | 0 | 25 | 165 | 15 | 155 | 2.97e-33 | 127 |
| MsG0180005999.01.T01 | MTR_5g090570 | 42.177 | 147 | 79 | 1 | 25 | 165 | 11 | 157 | 6.27e-28 | 112 |
| MsG0180005999.01.T01 | MTR_5g022380 | 36.879 | 141 | 89 | 0 | 25 | 165 | 13 | 153 | 3.28e-27 | 110 |
| MsG0180005999.01.T01 | MTR_4g073690 | 39.007 | 141 | 86 | 0 | 25 | 165 | 15 | 155 | 1.61e-26 | 107 |
| MsG0180005999.01.T01 | MTR_4g073690 | 39.007 | 141 | 86 | 0 | 25 | 165 | 15 | 155 | 7.74e-26 | 106 |
| MsG0180005999.01.T01 | MTR_2g100400 | 36.196 | 163 | 85 | 2 | 22 | 165 | 4 | 166 | 5.42e-25 | 103 |
| MsG0180005999.01.T01 | MTR_4g116210 | 33.793 | 145 | 88 | 2 | 26 | 165 | 12 | 153 | 5.89e-20 | 89.4 |
| MsG0180005999.01.T01 | MTR_2g450710 | 33.571 | 140 | 93 | 0 | 26 | 165 | 13 | 152 | 6.44e-20 | 89.4 |
| MsG0180005999.01.T01 | MTR_3g466040 | 27.854 | 219 | 134 | 3 | 22 | 216 | 4 | 222 | 8.87e-14 | 71.2 |
| MsG0180005999.01.T01 | MTR_3g466110 | 33.824 | 136 | 90 | 0 | 23 | 158 | 5 | 140 | 1.06e-13 | 70.9 |
| MsG0180005999.01.T01 | MTR_7g083660 | 30.405 | 148 | 97 | 3 | 25 | 168 | 7 | 152 | 6.19e-12 | 65.9 |
| MsG0180005999.01.T01 | MTR_8g071920 | 27.647 | 170 | 116 | 3 | 10 | 173 | 30 | 198 | 3.65e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180005999.01.T01 | AT2G39210 | 72.185 | 151 | 42 | 0 | 15 | 165 | 11 | 161 | 4.20e-77 | 245 |
| MsG0180005999.01.T01 | AT2G39210 | 60.526 | 76 | 30 | 0 | 162 | 237 | 491 | 566 | 8.97e-24 | 100 |
| MsG0180005999.01.T01 | AT2G28120 | 67.532 | 154 | 50 | 0 | 12 | 165 | 4 | 157 | 1.48e-70 | 227 |
| MsG0180005999.01.T01 | AT2G28120 | 47.917 | 96 | 49 | 1 | 162 | 256 | 482 | 577 | 2.84e-21 | 93.2 |
| MsG0180005999.01.T01 | AT5G14120 | 42.208 | 154 | 89 | 0 | 12 | 165 | 3 | 156 | 1.68e-33 | 128 |
| MsG0180005999.01.T01 | AT3G01930 | 41.447 | 152 | 89 | 0 | 14 | 165 | 5 | 156 | 2.84e-33 | 125 |
| MsG0180005999.01.T01 | AT1G74780 | 41.104 | 163 | 80 | 1 | 19 | 165 | 1 | 163 | 4.72e-33 | 126 |
| MsG0180005999.01.T01 | AT3G01930 | 41.447 | 152 | 89 | 0 | 14 | 165 | 5 | 156 | 1.68e-32 | 125 |
| MsG0180005999.01.T01 | AT5G50520 | 41.096 | 146 | 85 | 1 | 21 | 165 | 12 | 157 | 3.06e-32 | 124 |
| MsG0180005999.01.T01 | AT5G50630 | 41.096 | 146 | 85 | 1 | 21 | 165 | 12 | 157 | 3.06e-32 | 124 |
| MsG0180005999.01.T01 | AT1G18940 | 38.750 | 160 | 84 | 1 | 20 | 165 | 4 | 163 | 1.37e-31 | 122 |
| MsG0180005999.01.T01 | AT2G34350 | 39.216 | 153 | 81 | 1 | 25 | 165 | 7 | 159 | 5.54e-28 | 112 |
| MsG0180005999.01.T01 | AT2G34350 | 39.216 | 153 | 81 | 1 | 25 | 165 | 7 | 159 | 5.54e-28 | 112 |
| MsG0180005999.01.T01 | AT2G34355 | 40.690 | 145 | 78 | 2 | 22 | 158 | 4 | 148 | 3.13e-26 | 107 |
| MsG0180005999.01.T01 | AT4G34950 | 38.298 | 141 | 87 | 0 | 25 | 165 | 16 | 156 | 2.87e-25 | 104 |
| MsG0180005999.01.T01 | AT2G16660 | 38.298 | 141 | 87 | 0 | 25 | 165 | 14 | 154 | 4.16e-23 | 97.4 |
| MsG0180005999.01.T01 | AT2G16660 | 38.298 | 141 | 87 | 0 | 25 | 165 | 14 | 154 | 1.07e-22 | 97.4 |
| MsG0180005999.01.T01 | AT1G80530 | 32.143 | 140 | 95 | 0 | 26 | 165 | 14 | 153 | 2.26e-17 | 82.0 |
| MsG0180005999.01.T01 | AT5G45275 | 31.081 | 148 | 96 | 3 | 25 | 168 | 7 | 152 | 2.22e-13 | 70.1 |
| MsG0180005999.01.T01 | AT4G19450 | 31.757 | 148 | 95 | 3 | 25 | 168 | 7 | 152 | 3.43e-13 | 69.3 |
| MsG0180005999.01.T01 | AT4G19450 | 31.757 | 148 | 95 | 3 | 25 | 168 | 7 | 152 | 3.81e-13 | 69.3 |
| MsG0180005999.01.T01 | AT1G31470 | 29.730 | 148 | 98 | 3 | 25 | 168 | 43 | 188 | 2.99e-12 | 66.6 |
Find 62 sgRNAs with CRISPR-Local
Find 133 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTCCTCTCTTGCCGTCATTT+TGG | 0.200061 | 1:-98638476 | None:intergenic |
| GGTTCCCTTCTTAATTTCTT+TGG | 0.239197 | 1:+98637017 | MsG0180005999.01.T01:CDS |
| AAAAGGAGTACAAAGAAAAT+TGG | 0.243039 | 1:+98638257 | MsG0180005999.01.T01:CDS |
| TCTTTGGTTACTTCATGATA+TGG | 0.251877 | 1:+98637033 | MsG0180005999.01.T01:CDS |
| ACAACAACACCACGAGTTTC+GGG | 0.268783 | 1:-98637179 | None:intergenic |
| ATCACTGCAGCTACTTTGTT+TGG | 0.283099 | 1:+98638333 | MsG0180005999.01.T01:CDS |
| AAGAGGCAATTGATTGAAAA+AGG | 0.294262 | 1:+98638240 | MsG0180005999.01.T01:CDS |
| AACAACAACACCACGAGTTT+CGG | 0.304226 | 1:-98637180 | None:intergenic |
| TTTCTAATCATGTCAGCTTC+AGG | 0.321020 | 1:+98636828 | MsG0180005999.01.T01:CDS |
| CCTTATGTTGTTCTTGCAAT+TGG | 0.327850 | 1:+98636996 | MsG0180005999.01.T01:CDS |
| AGACACATTTGCCAAACTTT+TGG | 0.333591 | 1:-98637083 | None:intergenic |
| ATGTGTCTTTACATTTGTAT+AGG | 0.337463 | 1:+98637098 | MsG0180005999.01.T01:CDS |
| GTTAAGAGTTGTTTGGTCAT+AGG | 0.356138 | 1:-98636901 | None:intergenic |
| CACTAAAATAAGTGAAATAA+TGG | 0.361527 | 1:-98638358 | None:intergenic |
| AAATACCAAAACCAAAAGTT+TGG | 0.367844 | 1:+98637072 | MsG0180005999.01.T01:CDS |
| AAACTCGTGGTGTTGTTGTT+GGG | 0.376869 | 1:+98637183 | MsG0180005999.01.T01:CDS |
| TCAGGAGCCACCTACATGTT+TGG | 0.407429 | 1:+98636846 | MsG0180005999.01.T01:CDS |
| TTTCTTAATGTTAGGGTCGC+TGG | 0.409012 | 1:+98638195 | MsG0180005999.01.T01:intron |
| CTTAGTTTCTTCAAAGACTT+AGG | 0.418305 | 1:+98636927 | MsG0180005999.01.T01:CDS |
| ACCATCGTCCTGTGATAACT+TGG | 0.430124 | 1:-98636788 | None:intergenic |
| GAAACTCGTGGTGTTGTTGT+TGG | 0.437247 | 1:+98637182 | MsG0180005999.01.T01:CDS |
| TAAGGAGGTTAAGAGTTGTT+TGG | 0.437311 | 1:-98636908 | None:intergenic |
| GGACAGGAAGCAAAAGCTAC+AGG | 0.443209 | 1:+98638495 | MsG0180005999.01.T01:CDS |
| AAAGGAGTACAAAGAAAATT+GGG | 0.445150 | 1:+98638258 | MsG0180005999.01.T01:CDS |
| CTAAGTCTTTGAAGAAACTA+AGG | 0.454900 | 1:-98636926 | None:intergenic |
| CTGTGATAACTTGGACTATG+AGG | 0.462020 | 1:-98636779 | None:intergenic |
| TTGTTTGAGATAACCTCAAC+GGG | 0.472230 | 1:-98636752 | None:intergenic |
| TCAGAGCAGGTTGAAGTTGA+AGG | 0.480550 | 1:+98638429 | MsG0180005999.01.T01:CDS |
| TGACACCAAATGGCGGTTGA+AGG | 0.504392 | 1:+98636723 | None:intergenic |
| TATATGACAAAGAAGCTAAG+AGG | 0.509800 | 1:+98638223 | MsG0180005999.01.T01:CDS |
| AGTTGTTTGGTCATAGGCTA+AGG | 0.514651 | 1:-98636895 | None:intergenic |
| AACTCGTGGTGTTGTTGTTG+GGG | 0.514754 | 1:+98637184 | MsG0180005999.01.T01:CDS |
| AGTACAAAGAAAATTGGGTC+AGG | 0.524550 | 1:+98638263 | MsG0180005999.01.T01:CDS |
| CCAATTGCAAGAACAACATA+AGG | 0.528707 | 1:-98636996 | None:intergenic |
| AGTAACCAAAGAAATTAAGA+AGG | 0.528849 | 1:-98637022 | None:intergenic |
| TACATGTTTGGTCTTTACTC+CGG | 0.541203 | 1:+98636858 | MsG0180005999.01.T01:CDS |
| AAAGACTTAGGTGGCAACCT+TGG | 0.554717 | 1:+98636939 | MsG0180005999.01.T01:CDS |
| AAATGACGGCAAGAGAGGAC+AGG | 0.559480 | 1:+98638479 | MsG0180005999.01.T01:CDS |
| TATCACAGGACGATGGTTCG+TGG | 0.571165 | 1:+98636794 | MsG0180005999.01.T01:CDS |
| GTCCAAAATGACGGCAAGAG+AGG | 0.575323 | 1:+98638474 | MsG0180005999.01.T01:CDS |
| CAAGAGGTACCGATCAGAGC+AGG | 0.579521 | 1:+98638416 | MsG0180005999.01.T01:CDS |
| AGGAGCTACGGCTGAGATGA+CGG | 0.582623 | 1:+98638449 | MsG0180005999.01.T01:CDS |
| AGTTTCTTCAAAGACTTAGG+TGG | 0.582691 | 1:+98636930 | MsG0180005999.01.T01:CDS |
| AAGAATTTCCCCGAAACTCG+TGG | 0.589952 | 1:+98637170 | MsG0180005999.01.T01:CDS |
| CTCATAGTCCAAGTTATCAC+AGG | 0.590987 | 1:+98636780 | MsG0180005999.01.T01:CDS |
| CAACTTCAACCTGCTCTGAT+CGG | 0.592162 | 1:-98638425 | None:intergenic |
| ATGACGGTGGTCCAAAATGA+CGG | 0.592384 | 1:+98638465 | MsG0180005999.01.T01:CDS |
| GGTTGAAGTTGAAGGAGCTA+CGG | 0.593890 | 1:+98638437 | MsG0180005999.01.T01:CDS |
| GGTCAGGAATTGAATTGTGT+AGG | 0.604873 | 1:+98638279 | MsG0180005999.01.T01:CDS |
| GACAGGAAGCAAAAGCTACA+GGG | 0.610641 | 1:+98638496 | MsG0180005999.01.T01:CDS |
| TTTGTTTGAGATAACCTCAA+CGG | 0.614309 | 1:-98636753 | None:intergenic |
| GTAACCAAAGAAATTAAGAA+GGG | 0.616373 | 1:-98637021 | None:intergenic |
| TTGAAGGTGTAAGCCCGTTG+AGG | 0.620655 | 1:+98636739 | MsG0180005999.01.T01:CDS |
| AGTCTTTGAAGAAACTAAGG+AGG | 0.622224 | 1:-98636923 | None:intergenic |
| GGAGTAAAGACCAAACATGT+AGG | 0.637378 | 1:-98636856 | None:intergenic |
| ATAAAGGTGATATATACAAG+AGG | 0.658630 | 1:+98638400 | MsG0180005999.01.T01:CDS |
| CAACAACACCACGAGTTTCG+GGG | 0.667346 | 1:-98637178 | None:intergenic |
| GTAAAGACCAAACATGTAGG+TGG | 0.688543 | 1:-98636853 | None:intergenic |
| ATTGCAAGAACAACATAAGG+CGG | 0.705972 | 1:-98636993 | None:intergenic |
| TCCAAGTTATCACAGGACGA+TGG | 0.708132 | 1:+98636787 | MsG0180005999.01.T01:CDS |
| AGCTACGGCTGAGATGACGG+TGG | 0.773314 | 1:+98638452 | MsG0180005999.01.T01:CDS |
| TTAAGCCAGAGAAAACACCA+AGG | 0.797705 | 1:-98636956 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAAGAAATATAATCCAAT+TGG | - | Chr1:98638184-98638203 | None:intergenic | 15.0% |
| !! | GATTATATTTCTTAATGTTA+GGG | + | Chr1:98638188-98638207 | MsG0180005999.01.T01:intron | 15.0% |
| !!! | AGAACAATTAAGTTTTATAA+AGG | + | Chr1:98638384-98638403 | MsG0180005999.01.T01:CDS | 15.0% |
| !! | CACTAAAATAAGTGAAATAA+TGG | - | Chr1:98638361-98638380 | None:intergenic | 20.0% |
| !! | GGATTATATTTCTTAATGTT+AGG | + | Chr1:98638187-98638206 | MsG0180005999.01.T01:intron | 20.0% |
| !!! | AAGTTTTTGTATATTTCACT+TGG | + | Chr1:98637396-98637415 | MsG0180005999.01.T01:intron | 20.0% |
| !!! | ATTGATAATTTAGGTCAAAT+TGG | + | Chr1:98637824-98637843 | MsG0180005999.01.T01:intron | 20.0% |
| !!! | CATTATTTCACTTATTTTAG+TGG | + | Chr1:98638359-98638378 | MsG0180005999.01.T01:CDS | 20.0% |
| !!! | TTAACAGCAATTGATAATTT+AGG | + | Chr1:98637815-98637834 | MsG0180005999.01.T01:intron | 20.0% |
| ! | AAATACCAAAACCAAAAGTT+TGG | + | Chr1:98637072-98637091 | MsG0180005999.01.T01:CDS | 25.0% |
| ! | AAATTGTGATACTAATGCAA+TGG | + | Chr1:98637644-98637663 | MsG0180005999.01.T01:intron | 25.0% |
| ! | AATGGTTCGAATAAAAAGAA+AGG | - | Chr1:98637328-98637347 | None:intergenic | 25.0% |
| ! | AGTAACCAAAGAAATTAAGA+AGG | - | Chr1:98637025-98637044 | None:intergenic | 25.0% |
| ! | ATAAAGGTGATATATACAAG+AGG | + | Chr1:98638400-98638419 | MsG0180005999.01.T01:CDS | 25.0% |
| ! | ATAACATATCTATGCTGAAA+AGG | - | Chr1:98637757-98637776 | None:intergenic | 25.0% |
| ! | ATGTGTCTTTACATTTGTAT+AGG | + | Chr1:98637098-98637117 | MsG0180005999.01.T01:CDS | 25.0% |
| ! | GTAACCAAAGAAATTAAGAA+GGG | - | Chr1:98637024-98637043 | None:intergenic | 25.0% |
| ! | TAACATATCTATGCTGAAAA+GGG | - | Chr1:98637756-98637775 | None:intergenic | 25.0% |
| ! | TATTCAACTTTGATGAACTT+TGG | + | Chr1:98638145-98638164 | MsG0180005999.01.T01:intron | 25.0% |
| ! | TTGAACAAAAAGAAACTAGA+TGG | + | Chr1:98637676-98637695 | MsG0180005999.01.T01:intron | 25.0% |
| ! | TTGTTTCATTAGTGAGTATT+TGG | + | Chr1:98637885-98637904 | MsG0180005999.01.T01:intron | 25.0% |
| ! | TTTAAACAGAGTGAGTATAT+TGG | + | Chr1:98637468-98637487 | MsG0180005999.01.T01:intron | 25.0% |
| !! | AAAAGGAGTACAAAGAAAAT+TGG | + | Chr1:98638257-98638276 | MsG0180005999.01.T01:CDS | 25.0% |
| !! | AAAGGAGTACAAAGAAAATT+GGG | + | Chr1:98638258-98638277 | MsG0180005999.01.T01:CDS | 25.0% |
| !! | ATAAGCAAAATCAAAGCTTT+TGG | - | Chr1:98637282-98637301 | None:intergenic | 25.0% |
| !! | TATTTTGCTTCAGTAATCAT+TGG | + | Chr1:98638055-98638074 | MsG0180005999.01.T01:intron | 25.0% |
| !!! | ATTATGTTTTTATCCTGTGT+CGG | + | Chr1:98637995-98638014 | MsG0180005999.01.T01:intron | 25.0% |
| !!! | ATTGGTTTTTGCCATAATTT+CGG | + | Chr1:98638102-98638121 | MsG0180005999.01.T01:intron | 25.0% |
| !!! | GTAATCATTGGATTTTGTTT+TGG | + | Chr1:98638067-98638086 | MsG0180005999.01.T01:intron | 25.0% |
| !!! | GTTACTATTTTAACCGAAAA+TGG | - | Chr1:98637594-98637613 | None:intergenic | 25.0% |
| AACAAAAAGAAACTAGATGG+TGG | + | Chr1:98637679-98637698 | MsG0180005999.01.T01:intron | 30.0% | |
| AAGAGGCAATTGATTGAAAA+AGG | + | Chr1:98638240-98638259 | MsG0180005999.01.T01:CDS | 30.0% | |
| ATAATCAATGTGAACATGAG+TGG | - | Chr1:98637980-98637999 | None:intergenic | 30.0% | |
| CTTAGTTTCTTCAAAGACTT+AGG | + | Chr1:98636927-98636946 | MsG0180005999.01.T01:CDS | 30.0% | |
| GAAATTATGGCAAAAACCAA+TGG | - | Chr1:98638103-98638122 | None:intergenic | 30.0% | |
| TATATGACAAAGAAGCTAAG+AGG | + | Chr1:98638223-98638242 | MsG0180005999.01.T01:CDS | 30.0% | |
| TCTTTGGTTACTTCATGATA+TGG | + | Chr1:98637033-98637052 | MsG0180005999.01.T01:CDS | 30.0% | |
| TGATTACTGAAGCAAAATAG+AGG | - | Chr1:98638054-98638073 | None:intergenic | 30.0% | |
| ! | ATGTTATTGCTATTCTTTGC+TGG | + | Chr1:98637770-98637789 | MsG0180005999.01.T01:intron | 30.0% |
| ! | CTAAGTCTTTGAAGAAACTA+AGG | - | Chr1:98636929-98636948 | None:intergenic | 30.0% |
| ! | TTTGTTTGAGATAACCTCAA+CGG | - | Chr1:98636756-98636775 | None:intergenic | 30.0% |
| !! | AATGTGCTTATGCTTGTTTT+TGG | - | Chr1:98637866-98637885 | None:intergenic | 30.0% |
| !! | ATAGGCTAAGGATGTTTTTA+TGG | - | Chr1:98636886-98636905 | None:intergenic | 30.0% |
| !! | ATGTGCTTATGCTTGTTTTT+GGG | - | Chr1:98637865-98637884 | None:intergenic | 30.0% |
| !! | CTTTGATTTTGCTTATTGCT+TGG | + | Chr1:98637286-98637305 | MsG0180005999.01.T01:intron | 30.0% |
| !! | GGGATTTTAAAAGGTTATGT+TGG | + | Chr1:98637204-98637223 | MsG0180005999.01.T01:intron | 30.0% |
| !! | TAAGGATGTTTTTATGGTAC+CGG | - | Chr1:98636880-98636899 | None:intergenic | 30.0% |
| !! | TTGTTGTTGGGGATTTTAAA+AGG | + | Chr1:98637195-98637214 | MsG0180005999.01.T01:CDS | 30.0% |
| !!! | ATTTGCCAAACTTTTGGTTT+TGG | - | Chr1:98637080-98637099 | None:intergenic | 30.0% |
| AAAAGAAAGGAAATTGCTGC+TGG | - | Chr1:98637315-98637334 | None:intergenic | 35.0% | |
| AAAGAAAGGAAATTGCTGCT+GGG | - | Chr1:98637314-98637333 | None:intergenic | 35.0% | |
| AACCAGAAAAAACTCTTCCT+AGG | - | Chr1:98637916-98637935 | None:intergenic | 35.0% | |
| AACCATTCGATACATGAAAC+CGG | + | Chr1:98637341-98637360 | MsG0180005999.01.T01:intron | 35.0% | |
| AACTTTGATGAACTTTGGTG+GGG | + | Chr1:98638150-98638169 | MsG0180005999.01.T01:intron | 35.0% | |
| ACCAAACAACTCCGAAATTA+TGG | - | Chr1:98638116-98638135 | None:intergenic | 35.0% | |
| AGTACAAAGAAAATTGGGTC+AGG | + | Chr1:98638263-98638282 | MsG0180005999.01.T01:CDS | 35.0% | |
| AGTTCGTTGTTCTGTTTAAC+CGG | - | Chr1:98637363-98637382 | None:intergenic | 35.0% | |
| AGTTTCTTCAAAGACTTAGG+TGG | + | Chr1:98636930-98636949 | MsG0180005999.01.T01:CDS | 35.0% | |
| ATAGCCTTTGATGTGCAAAA+TGG | + | Chr1:98638028-98638047 | MsG0180005999.01.T01:intron | 35.0% | |
| ATTGCAAGAACAACATAAGG+CGG | - | Chr1:98636996-98637015 | None:intergenic | 35.0% | |
| CAACTTTGATGAACTTTGGT+GGG | + | Chr1:98638149-98638168 | MsG0180005999.01.T01:intron | 35.0% | |
| CCAATTGCAAGAACAACATA+AGG | - | Chr1:98636999-98637018 | None:intergenic | 35.0% | |
| CCTTATGTTGTTCTTGCAAT+TGG | + | Chr1:98636996-98637015 | MsG0180005999.01.T01:CDS | 35.0% | |
| GGTTCCCTTCTTAATTTCTT+TGG | + | Chr1:98637017-98637036 | MsG0180005999.01.T01:CDS | 35.0% | |
| GTAAAATCTTCACCTTGTTC+AGG | - | Chr1:98637722-98637741 | None:intergenic | 35.0% | |
| GTTAAACAGAACAACGAACT+TGG | + | Chr1:98637363-98637382 | MsG0180005999.01.T01:intron | 35.0% | |
| GTTAAGAGTTGTTTGGTCAT+AGG | - | Chr1:98636904-98636923 | None:intergenic | 35.0% | |
| TAAGGAGGTTAAGAGTTGTT+TGG | - | Chr1:98636911-98636930 | None:intergenic | 35.0% | |
| TATATTTCACTTGGTCTAGC+TGG | + | Chr1:98637405-98637424 | MsG0180005999.01.T01:intron | 35.0% | |
| TCAACTTTGATGAACTTTGG+TGG | + | Chr1:98638148-98638167 | MsG0180005999.01.T01:intron | 35.0% | |
| TTTCTAATCATGTCAGCTTC+AGG | + | Chr1:98636828-98636847 | MsG0180005999.01.T01:CDS | 35.0% | |
| ! | AGACACATTTGCCAAACTTT+TGG | - | Chr1:98637086-98637105 | None:intergenic | 35.0% |
| ! | AGTCTTTGAAGAAACTAAGG+AGG | - | Chr1:98636926-98636945 | None:intergenic | 35.0% |
| ! | GTGAGTATTTGGAATTACCT+AGG | + | Chr1:98637896-98637915 | MsG0180005999.01.T01:intron | 35.0% |
| ! | TACATGTTTGGTCTTTACTC+CGG | + | Chr1:98636858-98636877 | MsG0180005999.01.T01:CDS | 35.0% |
| ! | TGCATTTGTCGATCCATTTT+CGG | + | Chr1:98637578-98637597 | MsG0180005999.01.T01:intron | 35.0% |
| ! | TTGTTTGAGATAACCTCAAC+GGG | - | Chr1:98636755-98636774 | None:intergenic | 35.0% |
| !! | AAAGGTTATGTTGGTCTTAG+TGG | + | Chr1:98637213-98637232 | MsG0180005999.01.T01:intron | 35.0% |
| !!! | ATTTTTAGTCCACCTGAACA+AGG | + | Chr1:98637707-98637726 | MsG0180005999.01.T01:intron | 35.0% |
| !!! | GATTTTGTTTTGGTGCACAA+TGG | + | Chr1:98638077-98638096 | MsG0180005999.01.T01:intron | 35.0% |
| !!! | TACCTAGGAAGAGTTTTTTC+TGG | + | Chr1:98637911-98637930 | MsG0180005999.01.T01:intron | 35.0% |
| !!! | TCTCAGTCTTTTTCAAACAC+TGG | + | Chr1:98637128-98637147 | MsG0180005999.01.T01:CDS | 35.0% |
| !!! | TGGTCTAGCTGGTTTTTTAA+TGG | + | Chr1:98637416-98637435 | MsG0180005999.01.T01:intron | 35.0% |
| AAATCTTCACCTTGTTCAGG+TGG | - | Chr1:98637719-98637738 | None:intergenic | 40.0% | |
| AACAACAACACCACGAGTTT+CGG | - | Chr1:98637183-98637202 | None:intergenic | 40.0% | |
| AGTTGTTTGGTCATAGGCTA+AGG | - | Chr1:98636898-98636917 | None:intergenic | 40.0% | |
| CTATTCTTTGCTGGTACATG+TGG | + | Chr1:98637779-98637798 | MsG0180005999.01.T01:intron | 40.0% | |
| CTCATAGTCCAAGTTATCAC+AGG | + | Chr1:98636780-98636799 | MsG0180005999.01.T01:CDS | 40.0% | |
| CTGTGATAACTTGGACTATG+AGG | - | Chr1:98636782-98636801 | None:intergenic | 40.0% | |
| GCCATAATTTCGGAGTTGTT+TGG | + | Chr1:98638112-98638131 | MsG0180005999.01.T01:intron | 40.0% | |
| GGAGTAAAGACCAAACATGT+AGG | - | Chr1:98636859-98636878 | None:intergenic | 40.0% | |
| GGTCAGGAATTGAATTGTGT+AGG | + | Chr1:98638279-98638298 | MsG0180005999.01.T01:CDS | 40.0% | |
| GTAAAGACCAAACATGTAGG+TGG | - | Chr1:98636856-98636875 | None:intergenic | 40.0% | |
| TATCAATAAGTGACCGACAC+AGG | - | Chr1:98638011-98638030 | None:intergenic | 40.0% | |
| TCAACAAAGACAACAGCAAG+AGG | - | Chr1:98637528-98637547 | None:intergenic | 40.0% | |
| TTAAGCCAGAGAAAACACCA+AGG | - | Chr1:98636959-98636978 | None:intergenic | 40.0% | |
| TTTCTTAATGTTAGGGTCGC+TGG | + | Chr1:98638195-98638214 | MsG0180005999.01.T01:intron | 40.0% | |
| ! | AACCGGTTTCATGTATCGAA+TGG | - | Chr1:98637346-98637365 | None:intergenic | 40.0% |
| ! | ATCACTGCAGCTACTTTGTT+TGG | + | Chr1:98638333-98638352 | MsG0180005999.01.T01:CDS | 40.0% |
| !! | AAACTCGTGGTGTTGTTGTT+GGG | + | Chr1:98637183-98637202 | MsG0180005999.01.T01:CDS | 40.0% |
| !!! | TGTTTTTGGGTATCCAAGTG+AGG | - | Chr1:98637852-98637871 | None:intergenic | 40.0% |
| AAAGACTTAGGTGGCAACCT+TGG | + | Chr1:98636939-98636958 | MsG0180005999.01.T01:CDS | 45.0% | |
| AAGAATTTCCCCGAAACTCG+TGG | + | Chr1:98637170-98637189 | MsG0180005999.01.T01:CDS | 45.0% | |
| AATGTGAACATGAGTGGTCG+TGG | - | Chr1:98637974-98637993 | None:intergenic | 45.0% | |
| ACAACAACACCACGAGTTTC+GGG | - | Chr1:98637182-98637201 | None:intergenic | 45.0% | |
| ACCATCGTCCTGTGATAACT+TGG | - | Chr1:98636791-98636810 | None:intergenic | 45.0% | |
| ATGACGGTGGTCCAAAATGA+CGG | + | Chr1:98638465-98638484 | MsG0180005999.01.T01:CDS | 45.0% | |
| CAAAGACAACAGCAAGAGGT+AGG | - | Chr1:98637524-98637543 | None:intergenic | 45.0% | |
| CAACTTCAACCTGCTCTGAT+CGG | - | Chr1:98638428-98638447 | None:intergenic | 45.0% | |
| GACAGGAAGCAAAAGCTACA+GGG | + | Chr1:98638496-98638515 | MsG0180005999.01.T01:CDS | 45.0% | |
| GGTCAAATTGGAACCTCACT+TGG | + | Chr1:98637836-98637855 | MsG0180005999.01.T01:intron | 45.0% | |
| GGTTGAAGTTGAAGGAGCTA+CGG | + | Chr1:98638437-98638456 | MsG0180005999.01.T01:CDS | 45.0% | |
| TCCAAGTTATCACAGGACGA+TGG | + | Chr1:98636787-98636806 | MsG0180005999.01.T01:CDS | 45.0% | |
| TTTGCTGGTACATGTGGTGT+TGG | + | Chr1:98637785-98637804 | MsG0180005999.01.T01:intron | 45.0% | |
| ! | TCAGAGCAGGTTGAAGTTGA+AGG | + | Chr1:98638429-98638448 | MsG0180005999.01.T01:CDS | 45.0% |
| !! | AACTCGTGGTGTTGTTGTTG+GGG | + | Chr1:98637184-98637203 | MsG0180005999.01.T01:CDS | 45.0% |
| !! | GAAACTCGTGGTGTTGTTGT+TGG | + | Chr1:98637182-98637201 | MsG0180005999.01.T01:CDS | 45.0% |
| !! | GAGGCCATTTTGCACATCAA+AGG | - | Chr1:98638035-98638054 | None:intergenic | 45.0% |
| !! | TTTTGGTGCACAATGGCCAT+TGG | + | Chr1:98638084-98638103 | MsG0180005999.01.T01:intron | 45.0% |
| AAATGACGGCAAGAGAGGAC+AGG | + | Chr1:98638479-98638498 | MsG0180005999.01.T01:CDS | 50.0% | |
| CAACAACACCACGAGTTTCG+GGG | - | Chr1:98637181-98637200 | None:intergenic | 50.0% | |
| GGACAGGAAGCAAAAGCTAC+AGG | + | Chr1:98638495-98638514 | MsG0180005999.01.T01:CDS | 50.0% | |
| GTCCAAAATGACGGCAAGAG+AGG | + | Chr1:98638474-98638493 | MsG0180005999.01.T01:CDS | 50.0% | |
| TATCACAGGACGATGGTTCG+TGG | + | Chr1:98636794-98636813 | MsG0180005999.01.T01:CDS | 50.0% | |
| TCAGGAGCCACCTACATGTT+TGG | + | Chr1:98636846-98636865 | MsG0180005999.01.T01:CDS | 50.0% | |
| ! | GTCCTCTCTTGCCGTCATTT+TGG | - | Chr1:98638479-98638498 | None:intergenic | 50.0% |
| ! | TTGAAGGTGTAAGCCCGTTG+AGG | + | Chr1:98636739-98636758 | MsG0180005999.01.T01:CDS | 50.0% |
| !!! | GGCAACCTTGGTGTTTTCTC+TGG | + | Chr1:98636951-98636970 | MsG0180005999.01.T01:CDS | 50.0% |
| AGGAGCTACGGCTGAGATGA+CGG | + | Chr1:98638449-98638468 | MsG0180005999.01.T01:CDS | 55.0% | |
| GGTGGGGTAGCTAGTCCAAT+TGG | + | Chr1:98638166-98638185 | MsG0180005999.01.T01:intron | 55.0% | |
| ! | GCTGGTACATGTGGTGTTGG+TGG | + | Chr1:98637788-98637807 | MsG0180005999.01.T01:intron | 55.0% |
| !! | CAAGAGGTACCGATCAGAGC+AGG | + | Chr1:98638416-98638435 | MsG0180005999.01.T01:CDS | 55.0% |
| ! | AGCTACGGCTGAGATGACGG+TGG | + | Chr1:98638452-98638471 | MsG0180005999.01.T01:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr1 | gene | 98636732 | 98638524 | 98636732 | ID=MsG0180005999.01;Name=MsG0180005999.01 |
| Chr1 | mRNA | 98636732 | 98638524 | 98636732 | ID=MsG0180005999.01.T01;Parent=MsG0180005999.01;Name=MsG0180005999.01.T01;_AED=0.47;_eAED=0.47;_QI=0|0|0|1|1|1|2|0|266 |
| Chr1 | exon | 98636732 | 98637216 | 98636732 | ID=MsG0180005999.01.T01:exon:19735;Parent=MsG0180005999.01.T01 |
| Chr1 | exon | 98638209 | 98638524 | 98638209 | ID=MsG0180005999.01.T01:exon:19736;Parent=MsG0180005999.01.T01 |
| Chr1 | CDS | 98636732 | 98637216 | 98636732 | ID=MsG0180005999.01.T01:cds;Parent=MsG0180005999.01.T01 |
| Chr1 | CDS | 98638209 | 98638524 | 98638209 | ID=MsG0180005999.01.T01:cds;Parent=MsG0180005999.01.T01 |
| Gene Sequence |
| Protein sequence |
