AlfalfaGEDB | MsG0180004600.01

M. sativa cultivar ZhongmuNo.1 / MsG0180004600.01

KEGG: -
GO: -
PFAM: PF00838

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180004600.01.T02	XP_024638482.1	97.619	84	2	0	1	84	1	84	7.55E-51	166
MsG0180004600.01.T01	XP_024638482.1	97.619	84	2	0	1	84	1	84	7.55E-51	166

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180004600.01.T01	P43349	95.238	84	4	0	1	84	1	84	6.88E-52	162
MsG0180004600.01.T02	P43349	95.238	84	4	0	1	84	1	84	6.88E-52	162

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180004600.01.T01	G7I8Q1	96.429	84	3	0	1	84	1	84	2.54e-50	165
MsG0180004600.01.T02	G7I8Q1	96.429	84	3	0	1	84	1	84	2.54e-50	165

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080047957.01	MsG0180004600.01	0.816836	4.503848e-52	3.226324e-49
MsG0080047959.01	MsG0180004600.01	0.830533	2.784398e-55	2.941568e-52
MsG0080048764.01	MsG0180004600.01	0.811758	5.963981e-51	3.723052e-48
MsG0080048809.01	MsG0180004600.01	-0.861725	8.383896e-64	2.394650e-60
MsG0080048982.01	MsG0180004600.01	0.827289	1.698601e-54	1.632805e-51
MsG0180000240.01	MsG0180004600.01	-0.841004	6.180810e-58	8.959186e-55
MsG0180000271.01	MsG0180004600.01	0.842288	2.833763e-58	4.276398e-55
MsG0180000470.01	MsG0180004600.01	0.807488	4.932285e-50	2.750810e-47
MsG0180000546.01	MsG0180004600.01	0.812290	4.567288e-51	2.892521e-48
MsG0180001312.01	MsG0180004600.01	0.831566	1.552018e-55	1.690750e-52
MsG0180001381.01	MsG0180004600.01	0.819478	1.137065e-52	8.760233e-50
MsG0180001663.01	MsG0180004600.01	0.851154	1.067640e-60	2.141130e-57
MsG0180001712.01	MsG0180004600.01	0.814136	1.796910e-51	1.195876e-48
MsG0180001904.01	MsG0180004600.01	0.802573	5.261203e-49	2.586020e-46
MsG0180002282.01	MsG0180004600.01	0.811133	8.152462e-51	5.006104e-48
MsG0180002709.01	MsG0180004600.01	0.817636	2.976370e-52	2.179257e-49
MsG0180002955.01	MsG0180004600.01	0.838234	3.245854e-57	4.319991e-54
MsG0180004085.01	MsG0180004600.01	0.860298	2.277244e-63	6.194538e-60
MsG0180004116.01	MsG0180004600.01	0.801288	9.665275e-49	4.598363e-46
MsG0180004599.01	MsG0180004600.01	0.905872	2.711021e-80	4.476625e-76
MsG0180004600.01	MsG0180004602.01	0.896028	5.460544e-76	5.802078e-72
MsG0180004600.01	MsG0180004603.01	0.858188	9.779843e-63	2.475171e-59
MsG0180004600.01	MsG0180005050.01	0.805732	1.158061e-49	6.173745e-47
MsG0180004600.01	MsG0180005160.01	0.837359	5.444162e-57	7.054279e-54
MsG0180004600.01	MsG0180005185.01	0.802645	5.084221e-49	2.503624e-46
MsG0180004600.01	MsG0180005354.01	0.810537	1.097449e-50	6.632512e-48
MsG0180004600.01	MsG0180005881.01	-0.824832	6.519677e-54	5.841077e-51
MsG0180004600.01	MsG0180005960.01	0.818584	1.816741e-52	1.365325e-49
MsG0180004600.01	MsG0180005999.01	0.808040	3.765768e-50	2.130638e-47
MsG0180004600.01	MsG0180006138.01	0.824559	7.558177e-54	6.718466e-51
MsG0180004600.01	MsG0180006210.01	-0.803741	3.015962e-49	1.527456e-46
MsG0180004600.01	MsG0280006356.01	0.804888	1.740301e-49	9.078844e-47
MsG0180004600.01	MsG0280006411.01	0.810131	1.342557e-50	8.027736e-48
MsG0180004600.01	MsG0280006456.01	0.821877	3.195915e-53	2.632615e-50
MsG0180004600.01	MsG0280007064.01	0.805782	1.130222e-49	6.032823e-47
MsG0180004600.01	MsG0280007547.01	0.808604	2.854141e-50	1.638967e-47
MsG0180004600.01	MsG0280007636.01	0.808002	3.835244e-50	2.167925e-47
MsG0180004600.01	MsG0280007864.01	-0.855639	5.513387e-62	1.281406e-58
MsG0180004600.01	MsG0280008112.01	0.800352	1.500259e-48	6.970614e-46
MsG0180004600.01	MsG0280008894.01	0.851821	6.911139e-61	1.416037e-57
MsG0180004600.01	MsG0280008907.01	0.804597	2.001383e-49	1.036143e-46
MsG0180004600.01	MsG0280009024.01	0.810515	1.109242e-50	6.699946e-48
MsG0180004600.01	MsG0280009395.01	-0.804856	1.766964e-49	9.210034e-47
MsG0180004600.01	MsG0280009637.01	-0.805981	1.026540e-49	5.507490e-47
MsG0180004600.01	MsG0280009754.01	0.840236	9.816198e-58	1.389592e-54
MsG0180004600.01	MsG0280010204.01	0.804596	2.002818e-49	1.036851e-46
MsG0180004600.01	MsG0280010416.01	0.811514	6.740472e-51	4.180912e-48
MsG0180004600.01	MsG0280010443.01	0.818388	2.011578e-52	1.503772e-49
MsG0180004600.01	MsG0280010531.01	0.806660	7.385100e-50	4.031035e-47
MsG0180004600.01	MsG0280010551.01	0.828165	1.046250e-54	1.031726e-51
MsG0180004600.01	MsG0280010702.01	0.831709	1.431173e-55	1.565825e-52
MsG0180004600.01	MsG0280010784.01	0.822329	2.511152e-53	2.095334e-50
MsG0180004600.01	MsG0280011032.01	0.806600	7.602882e-50	4.143683e-47
MsG0180004600.01	MsG0280011131.01	0.830335	3.111553e-55	3.268624e-52
MsG0180004600.01	MsG0280011235.01	0.805416	1.349073e-49	7.133243e-47
MsG0180004600.01	MsG0280011334.01	0.811682	6.197611e-51	3.860828e-48
MsG0180004600.01	MsG0280011376.01	0.869616	2.710387e-66	1.023596e-62
MsG0180004600.01	MsG0280011410.01	0.853138	2.912136e-61	6.228470e-58
MsG0180004600.01	MsG0380011537.01	0.846300	2.368491e-59	4.058204e-56
MsG0180004600.01	MsG0380011870.01	0.805224	1.480398e-49	7.788865e-47
MsG0180004600.01	MsG0380011895.01	0.862926	3.585147e-64	1.067962e-60
MsG0180004600.01	MsG0380012279.01	-0.822851	1.898793e-53	1.608101e-50
MsG0180004600.01	MsG0380012458.01	0.800924	1.147213e-48	5.408126e-46
MsG0180004600.01	MsG0380012650.01	0.805638	1.211948e-49	6.444987e-47
MsG0180004600.01	MsG0380014147.01	0.826229	3.042654e-54	2.836526e-51
MsG0180004600.01	MsG0380014551.01	-0.830182	3.391055e-55	3.546595e-52
MsG0180004600.01	MsG0380014706.01	0.801866	7.354464e-49	3.550658e-46
MsG0180004600.01	MsG0380014770.01	0.852664	3.978593e-61	8.374509e-58
MsG0180004600.01	MsG0380015166.01	0.810925	9.044632e-51	5.523725e-48
MsG0180004600.01	MsG0380015374.01	0.802895	4.516109e-49	2.238118e-46
MsG0180004600.01	MsG0380015497.01	0.826718	2.326544e-54	2.199270e-51
MsG0180004600.01	MsG0380016064.01	0.802059	6.713795e-49	3.257167e-46
MsG0180004600.01	MsG0380016182.01	0.858410	8.397994e-63	2.141384e-59
MsG0180004600.01	MsG0380016187.01	0.807494	4.917818e-50	2.743221e-47
MsG0180004600.01	MsG0380016475.01	0.825236	5.232387e-54	4.741949e-51
MsG0180004600.01	MsG0380016581.01	0.850718	1.416499e-60	2.800192e-57
MsG0180004600.01	MsG0380016624.01	0.863050	3.282093e-64	9.816524e-61
MsG0180004600.01	MsG0380017140.01	0.803525	3.344037e-49	1.684318e-46
MsG0180004600.01	MsG0380017178.01	-0.815322	9.808716e-52	6.741147e-49
MsG0180004600.01	MsG0380017220.01	0.813986	1.938475e-51	1.284801e-48
MsG0180004600.01	MsG0380017232.01	0.802988	4.319873e-49	2.145840e-46
MsG0180004600.01	MsG0380017263.01	-0.804941	1.696398e-49	8.861516e-47
MsG0180004600.01	MsG0380017266.01	-0.811842	5.717538e-51	3.577210e-48
MsG0180004600.01	MsG0380017286.01	0.806352	8.574468e-50	4.643768e-47
MsG0180004600.01	MsG0380017543.01	0.802078	6.654546e-49	3.229937e-46
MsG0180004600.01	MsG0380017551.01	-0.874574	6.072666e-68	2.747115e-64
MsG0180004600.01	MsG0380017680.01	0.812391	4.340871e-51	2.756624e-48
MsG0180004600.01	MsG0380017941.01	0.811902	5.549737e-51	3.477669e-48
MsG0180004600.01	MsG0480018236.01	0.825978	3.491121e-54	3.231550e-51
MsG0180004600.01	MsG0480018473.01	0.809026	2.319322e-50	1.346786e-47
MsG0180004600.01	MsG0480018635.01	0.807021	6.193639e-50	3.412584e-47
MsG0180004600.01	MsG0480018847.01	0.805454	1.324312e-49	7.009421e-47
MsG0180004600.01	MsG0480018883.01	0.828817	7.279208e-55	7.315229e-52
MsG0180004600.01	MsG0480018964.01	0.801622	8.256529e-49	3.961157e-46
MsG0180004600.01	MsG0480019970.01	0.804592	2.006250e-49	1.038541e-46
MsG0180004600.01	MsG0480020327.01	-0.821722	3.471068e-53	2.846557e-50
MsG0180004600.01	MsG0480021274.01	0.806942	6.437764e-50	3.539791e-47
MsG0180004600.01	MsG0480022198.01	0.852222	5.318944e-61	1.103806e-57
MsG0180004600.01	MsG0480022392.01	-0.809174	2.155571e-50	1.256744e-47
MsG0180004600.01	MsG0480022482.01	0.829061	6.354878e-55	6.431877e-52
MsG0180004600.01	MsG0480022615.01	-0.840057	1.093457e-57	1.539486e-54
MsG0180004600.01	MsG0480022933.01	0.846942	1.581585e-59	2.766747e-56
MsG0180004600.01	MsG0480023079.01	0.801441	8.992482e-49	4.294798e-46
MsG0180004600.01	MsG0480023248.01	0.850723	1.412170e-60	2.791935e-57
MsG0180004600.01	MsG0480023251.01	0.805076	1.589435e-49	8.331095e-47
MsG0180004600.01	MsG0480023270.01	0.812183	4.819798e-51	3.043519e-48
MsG0180004600.01	MsG0480023654.01	0.826930	2.070484e-54	1.969494e-51
MsG0180004600.01	MsG0480023670.01	0.808299	3.315288e-50	1.888735e-47
MsG0180004600.01	MsG0480023937.01	0.810821	9.525610e-51	5.801072e-48
MsG0180004600.01	MsG0580024114.01	0.823046	1.710446e-53	1.456642e-50
MsG0180004600.01	MsG0580024160.01	0.820105	8.174941e-53	6.410041e-50
MsG0180004600.01	MsG0580024304.01	0.806609	7.570532e-50	4.126932e-47
MsG0180004600.01	MsG0580024363.01	-0.835006	2.157070e-56	2.603794e-53
MsG0180004600.01	MsG0580024472.01	0.805703	1.174455e-49	6.256445e-47
MsG0180004600.01	MsG0580024581.01	0.825571	4.359752e-54	3.988850e-51
MsG0180004600.01	MsG0580025009.01	0.811430	7.027371e-51	4.349223e-48
MsG0180004600.01	MsG0580025026.01	0.805402	1.358157e-49	7.178825e-47
MsG0180004600.01	MsG0580025328.01	0.836751	7.790248e-57	9.910541e-54
MsG0180004600.01	MsG0580025329.01	0.819572	1.082462e-52	8.361452e-50
MsG0180004600.01	MsG0580025448.01	0.818775	1.644119e-52	1.242210e-49
MsG0180004600.01	MsG0580025758.01	0.807284	5.448377e-50	3.022649e-47
MsG0180004600.01	MsG0580026023.01	0.807136	5.856626e-50	3.236451e-47
MsG0180004600.01	MsG0580026340.01	0.804348	2.255507e-49	1.160250e-46
MsG0180004600.01	MsG0580026777.01	0.810573	1.077649e-50	6.519262e-48
MsG0180004600.01	MsG0580027152.01	0.811236	7.744915e-51	4.768625e-48
MsG0180004600.01	MsG0580027228.01	0.804616	1.983185e-49	1.027217e-46
MsG0180004600.01	MsG0580027833.01	0.810603	1.061954e-50	6.429549e-48
MsG0180004600.01	MsG0580027926.01	0.802851	4.610765e-49	2.282545e-46
MsG0180004600.01	MsG0580028289.01	0.816930	4.288610e-52	3.080162e-49
MsG0180004600.01	MsG0580029554.01	0.802979	4.338050e-49	2.154384e-46
MsG0180004600.01	MsG0580029999.01	-0.859162	5.006562e-63	1.309666e-59
MsG0180004600.01	MsG0680030316.01	0.811845	5.710296e-51	3.572880e-48
MsG0180004600.01	MsG0680030415.01	0.803475	3.425730e-49	1.723121e-46
MsG0180004600.01	MsG0680030636.01	0.805876	1.080081e-49	5.778972e-47
MsG0180004600.01	MsG0680030839.01	0.815056	1.124037e-51	7.668793e-49
MsG0180004600.01	MsG0680031114.01	0.821960	3.058175e-53	2.524889e-50
MsG0180004600.01	MsG0680031334.01	0.821691	3.529468e-53	2.891955e-50
MsG0180004600.01	MsG0680031377.01	-0.848166	7.288919e-60	1.325776e-56
MsG0180004600.01	MsG0680031446.01	-0.803834	2.885787e-49	1.465020e-46
MsG0180004600.01	MsG0680032058.01	0.823219	1.558484e-53	1.333589e-50
MsG0180004600.01	MsG0680032157.01	0.801925	7.152929e-49	3.458342e-46
MsG0180004600.01	MsG0680033391.01	0.825010	5.916331e-54	5.327843e-51
MsG0180004600.01	MsG0680034914.01	0.836768	7.711017e-57	9.814760e-54
MsG0180004600.01	MsG0680035278.01	0.805253	1.459488e-49	7.684536e-47
MsG0180004600.01	MsG0680035844.01	0.808136	3.591428e-50	2.037280e-47
MsG0180004600.01	MsG0780035957.01	0.813996	1.928546e-51	1.278606e-48
MsG0180004600.01	MsG0780035958.01	0.819981	8.729946e-53	6.820860e-50
MsG0180004600.01	MsG0780036128.01	0.804715	1.891456e-49	9.822540e-47
MsG0180004600.01	MsG0780036289.01	0.817277	3.585464e-52	2.599466e-49
MsG0180004600.01	MsG0780036548.01	0.805302	1.425197e-49	7.513739e-47
MsG0180004600.01	MsG0780037082.01	0.825745	3.963716e-54	3.644820e-51
MsG0180004600.01	MsG0780037284.01	-0.813862	2.064281e-51	1.363667e-48
MsG0180004600.01	MsG0780037512.01	0.810668	1.027956e-50	6.234701e-48
MsG0180004600.01	MsG0780038092.01	0.837274	5.727104e-57	7.401195e-54
MsG0180004600.01	MsG0780038231.01	0.832530	8.971315e-56	1.005461e-52
MsG0180004600.01	MsG0780038636.01	0.838335	3.057164e-57	4.081731e-54
MsG0180004600.01	MsG0780038644.01	0.836097	1.142649e-56	1.425327e-53
MsG0180004600.01	MsG0780038827.01	0.822799	1.952586e-53	1.651155e-50
MsG0180004600.01	MsG0780038833.01	0.815206	1.040975e-51	7.130997e-49
MsG0180004600.01	MsG0780039143.01	0.821017	5.048975e-53	4.060209e-50
MsG0180004600.01	MsG0780039405.01	0.800284	1.548910e-48	7.184301e-46
MsG0180004600.01	MsG0780039515.01	-0.810571	1.078974e-50	6.526820e-48
MsG0180004600.01	MsG0780039867.01	-0.815401	9.422893e-52	6.489982e-49
MsG0180004600.01	MsG0780039896.01	0.820593	6.318353e-53	5.020536e-50
MsG0180004600.01	MsG0780039952.01	0.809865	1.531887e-50	9.096476e-48
MsG0180004600.01	MsG0780040576.01	-0.833677	4.647505e-56	5.390436e-53
MsG0180004600.01	MsG0780040712.01	0.814096	1.833156e-51	1.218662e-48
MsG0180004600.01	MsG0780040788.01	0.802362	5.817335e-49	2.844248e-46
MsG0180004600.01	MsG0780040872.01	0.805891	1.072370e-49	5.739872e-47
MsG0180004600.01	MsG0780040947.01	0.808892	2.476657e-50	1.432981e-47
MsG0180004600.01	MsG0780041015.01	-0.833570	4.943691e-56	5.715569e-53
MsG0180004600.01	MsG0780041080.01	0.809109	2.226139e-50	1.295635e-47
MsG0180004600.01	MsG0880042055.01	0.819182	1.328385e-52	1.014960e-49
MsG0180004600.01	MsG0880042161.01	0.805986	1.024081e-49	5.495020e-47
MsG0180004600.01	MsG0880042247.01	0.813733	2.204100e-51	1.450963e-48
MsG0180004600.01	MsG0880042404.01	0.801076	1.067818e-48	5.053391e-46
MsG0180004600.01	MsG0880042616.01	0.804158	2.470238e-49	1.264560e-46
MsG0180004600.01	MsG0880042698.01	0.801519	8.667776e-49	4.147893e-46
MsG0180004600.01	MsG0880042743.01	0.824257	8.904881e-54	7.846302e-51
MsG0180004600.01	MsG0880043059.01	0.810647	1.039010e-50	6.298029e-48
MsG0180004600.01	MsG0880043172.01	0.826254	3.001270e-54	2.799911e-51
MsG0180004600.01	MsG0880043287.01	0.812620	3.868053e-51	2.471218e-48
MsG0180004600.01	MsG0880043292.01	0.819259	1.275911e-52	9.769559e-50
MsG0180004600.01	MsG0880043509.01	0.801741	7.801944e-49	3.754485e-46
MsG0180004600.01	MsG0880043804.01	0.824011	1.016740e-53	8.896850e-51
MsG0180004600.01	MsG0880044062.01	-0.825091	5.663161e-54	5.111406e-51
MsG0180004600.01	MsG0880044455.01	-0.818782	1.637776e-52	1.237657e-49
MsG0180004600.01	MsG0880044573.01	0.837051	6.529454e-57	8.381645e-54
MsG0180004600.01	MsG0880044574.01	0.810754	9.847627e-51	5.986610e-48
MsG0180004600.01	MsG0880044638.01	0.823595	1.272943e-53	1.100928e-50
MsG0180004600.01	MsG0880045450.01	0.806083	9.772146e-50	5.256245e-47
MsG0180004600.01	MsG0880045707.01	-0.814872	1.234588e-51	8.381098e-49
MsG0180004600.01	MsG0880045926.01	0.803892	2.806287e-49	1.426863e-46
MsG0180004600.01	MsG0880046244.01	0.821142	4.725023e-53	3.812664e-50
MsG0180004600.01	MsG0880047019.01	0.808475	3.041198e-50	1.740623e-47
MsG0180004600.01	MsG0880047425.01	0.844382	7.827895e-59	1.261433e-55
MsG0180004600.01	MsG0880047689.01	-0.836786	7.631290e-57	9.718649e-54

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180004600.01.T02	MTR_1g083380	96.429	84	3	0	1	84	1	84	6.44e-54	165
MsG0180004600.01.T02	MTR_1g083350	96.429	84	3	0	1	84	1	84	6.51e-54	165
MsG0180004600.01.T02	MTR_1g083340	87.234	94	2	1	1	84	1	94	1.56e-51	159
MsG0180004600.01.T02	MTR_2g436620	84.524	84	12	1	1	84	1	83	1.20e-44	141
MsG0180004600.01.T02	MTR_6g071090	79.762	84	16	1	1	84	1	83	6.97e-40	129
MsG0180004600.01.T02	MTR_2g436620	82.759	58	9	1	27	84	1	57	3.02e-27	97.1
MsG0180004600.01.T01	MTR_1g083380	96.429	84	3	0	1	84	1	84	6.44e-54	165
MsG0180004600.01.T01	MTR_1g083350	96.429	84	3	0	1	84	1	84	6.51e-54	165
MsG0180004600.01.T01	MTR_1g083340	87.234	94	2	1	1	84	1	94	1.56e-51	159
MsG0180004600.01.T01	MTR_2g436620	84.524	84	12	1	1	84	1	83	1.20e-44	141
MsG0180004600.01.T01	MTR_6g071090	79.762	84	16	1	1	84	1	83	6.97e-40	129
MsG0180004600.01.T01	MTR_2g436620	82.759	58	9	1	27	84	1	57	3.02e-27	97.1

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180004600.01.T02	AT3G16640	84.524	84	13	0	1	84	1	84	8.80e-46	144
MsG0180004600.01.T02	AT3G05540	83.333	84	13	1	1	84	1	83	9.67e-38	124
MsG0180004600.01.T01	AT3G16640	84.524	84	13	0	1	84	1	84	8.80e-46	144
MsG0180004600.01.T01	AT3G05540	83.333	84	13	1	1	84	1	83	9.67e-38	124

Find 10 sgRNAs with CRISPR-Local

Find 99 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CGCAACCATGCTTGTTTACC+AGG	0.349778	1:-80205536	MsG0180004600.01.T01:exon
GAAAGAGTTCAAGTGATTGT+AGG	0.357231	1:+80205661	None:intergenic
GTTTACCAGGATCTTCTTAC+GGG	0.390880	1:-80205523	MsG0180004600.01.T01:intron
TGTTTACCAGGATCTTCTTA+CGG	0.395300	1:-80205524	MsG0180004600.01.T01:CDS
AATAAGAGAGAAGCAAAAGA+AGG	0.503108	1:+80205571	None:intergenic
AAAGTGAGATTGAGCAATAG+AGG	0.537193	1:+80205612	None:intergenic
GTTTACCCGTAAGAAGATCC+TGG	0.562606	1:+80205518	None:intergenic
GTGAGATTGAGCAATAGAGG+TGG	0.598021	1:+80205615	None:intergenic
CTGGTAAACAAGCATGGTTG+CGG	0.598178	1:+80205537	None:intergenic
AAGATCCTGGTAAACAAGCA+TGG	0.602746	1:+80205531	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ATTTATTATGATCATATATT+TGG	+	Chr1:80204965-80204984	None:intergenic	10.0%
!!!	ATTAAAATTTTGGATAATAA+TGG	+	Chr1:80204534-80204553	None:intergenic	10.0%
!!!	TTTAATTTAATAGAATTTGT+TGG	-	Chr1:80204548-80204567	MsG0180004600.01.T01:CDS	10.0%
!!	AAAACAAAAATTCATTCAAA+TGG	-	Chr1:80204764-80204783	MsG0180004600.01.T01:intron	15.0%
!!	ATTATAAAATTTCAGTAGTA+TGG	-	Chr1:80205691-80205710	MsG0180004600.01.T02:five_prime_UTR	15.0%
!!!	TTATATATTAACCTTTTGTA+AGG	-	Chr1:80204334-80204353	MsG0180004600.01.T01:three_prime_UTR	15.0%
!!!	TTTTTTTTTTTTTTGACACA+AGG	-	Chr1:80204386-80204405	MsG0180004600.01.T01:three_prime_UTR	15.0%
!!	AAAAGTAAAAGAAACCTAAT+TGG	+	Chr1:80204129-80204148	None:intergenic	20.0%
!!	AAAGTAAAAGAAACCTAATT+GGG	+	Chr1:80204128-80204147	None:intergenic	20.0%
!!	TAATCTTAAATATTAGTAGC+AGG	+	Chr1:80204715-80204734	None:intergenic	20.0%
!!	TTATCATTCATCGTAATATT+TGG	+	Chr1:80204207-80204226	None:intergenic	20.0%
!!!	ACAAGGTTAAAATACTTTTT+TGG	-	Chr1:80204403-80204422	MsG0180004600.01.T01:intron	20.0%
!!!	ATTAAGTTTTCTCTTTTTTG+TGG	-	Chr1:80205343-80205362	MsG0180004600.01.T01:intron	20.0%
!!!	ATTATCTTTCATCTCTTTTT+TGG	-	Chr1:80205316-80205335	MsG0180004600.01.T01:intron	20.0%
!!!	TTTTTCATAAACTTCACTTT+TGG	-	Chr1:80204282-80204301	MsG0180004600.01.T01:intron	20.0%
!	AAAATCCACAATCAAGTATT+AGG	+	Chr1:80204675-80204694	None:intergenic	25.0%
!	AAATATTACTTAGCAGTTTG+TGG	+	Chr1:80204626-80204645	None:intergenic	25.0%
!	AAATTCATTCACTAAACACA+GGG	+	Chr1:80204239-80204258	None:intergenic	25.0%
!	AAATTTCAGTAGTATGGTTA+TGG	-	Chr1:80205697-80205716	MsG0180004600.01.T02:five_prime_UTR	25.0%
!	AATCTTAACAACCTTACAAA+AGG	+	Chr1:80204348-80204367	None:intergenic	25.0%
!	ACACATTTAGTTATCATGTT+AGG	-	Chr1:80205518-80205537	MsG0180004600.01.T01:intron	25.0%
!	ACTATTATAGATCAAACTTG+TGG	-	Chr1:80204457-80204476	MsG0180004600.01.T01:CDS	25.0%
!	CAAAATCCTATGAAAAACAA+TGG	+	Chr1:80204154-80204173	None:intergenic	25.0%
!	GAGTTTACTATTCTCTAATT+AGG	-	Chr1:80205616-80205635	MsG0180004600.01.T01:intron	25.0%
!	GATGAAATACATACAATTGT+AGG	+	Chr1:80205296-80205315	None:intergenic	25.0%
!	TGGAAAACCTTAAATTTCTT+GGG	-	Chr1:80204423-80204442	MsG0180004600.01.T01:CDS	25.0%
!	TTGGAAAACCTTAAATTTCT+TGG	-	Chr1:80204422-80204441	MsG0180004600.01.T01:CDS	25.0%
!	TTTACTATTCTCTAATTAGG+AGG	-	Chr1:80205619-80205638	MsG0180004600.01.T01:intron	25.0%
!!	GATAATAATGGAAAACCTAA+AGG	+	Chr1:80204522-80204541	None:intergenic	25.0%
!!!	TTTTCTCCATTGTTTTTCAT+AGG	-	Chr1:80204145-80204164	MsG0180004600.01.T01:three_prime_UTR	25.0%
	AAATTCAGAATGGAATGTTG+TGG	-	Chr1:80204863-80204882	MsG0180004600.01.T01:intron	30.0%
	AATAAGAGAGAAGCAAAAGA+AGG	+	Chr1:80204018-80204037	None:intergenic	30.0%
	AATTCAGAATGGAATGTTGT+GGG	-	Chr1:80204864-80204883	MsG0180004600.01.T01:intron	30.0%
	ACAAAAAACTCAAAGATGCA+AGG	+	Chr1:80204093-80204112	None:intergenic	30.0%
	AGTAACAACTTATCAAAAGC+TGG	+	Chr1:80205160-80205179	None:intergenic	30.0%
	ATTCTTAATCGATAGTACTC+TGG	-	Chr1:80205559-80205578	MsG0180004600.01.T01:five_prime_UTR	30.0%
	CACATCACACAATAAACTTT+AGG	+	Chr1:80204991-80205010	None:intergenic	30.0%
	GAAATTCATTCACTAAACAC+AGG	+	Chr1:80204240-80204259	None:intergenic	30.0%
	GATCTATAATAGTGTGTGTT+TGG	+	Chr1:80204450-80204469	None:intergenic	30.0%
!	CTTTGTTGATGAATTTGTCT+AGG	-	Chr1:80204805-80204824	MsG0180004600.01.T01:intron	30.0%
!	TTTTACTTTACCACCCAATT+AGG	-	Chr1:80204112-80204131	MsG0180004600.01.T01:three_prime_UTR	30.0%
!!	AATTGTAGGTCTTTGAGTTT+TGG	+	Chr1:80205282-80205301	None:intergenic	30.0%
!!	AGTTTTATGTTTGTGTTCTG+TGG	-	Chr1:80204491-80204510	MsG0180004600.01.T01:CDS	30.0%
!!	ATTGTAGGTCTTTGAGTTTT+GGG	+	Chr1:80205281-80205300	None:intergenic	30.0%
!!!	ATCAATGTTGCAGTTTTGTT+GGG	-	Chr1:80205387-80205406	MsG0180004600.01.T01:intron	30.0%
	AAAGTGAGATTGAGCAATAG+AGG	+	Chr1:80203977-80203996	None:intergenic	35.0%
	ATATTGTTCTCAGAGCAACA+TGG	-	Chr1:80205664-80205683	MsG0180004600.01.T02:five_prime_UTR	35.0%
	CATTCTGAATTTCCTTGTAG+AGG	+	Chr1:80204855-80204874	None:intergenic	35.0%
	CCACAATCAAGTATTAGGTT+AGG	+	Chr1:80204670-80204689	None:intergenic	35.0%
	CCTAACCTAATACTTGATTG+TGG	-	Chr1:80204667-80204686	MsG0180004600.01.T01:intron	35.0%
	CTCTACAAGGAAATTCAGAA+TGG	-	Chr1:80204853-80204872	MsG0180004600.01.T01:intron	35.0%
	GAAAGAGTTCAAGTGATTGT+AGG	+	Chr1:80203928-80203947	None:intergenic	35.0%
	GTAAAAGAAACCTAATTGGG+TGG	+	Chr1:80204125-80204144	None:intergenic	35.0%
	GTGATGTGATTATTTGCAGT+GGG	-	Chr1:80205003-80205022	MsG0180004600.01.T01:intron	35.0%
	GTTAGGCTAATCGTGTTTAA+GGG	+	Chr1:80204653-80204672	None:intergenic	35.0%
	GTTTGGTCCCAAGAAATTTA+AGG	+	Chr1:80204433-80204452	None:intergenic	35.0%
	TAGGCAAAGTAGAGAAAAGT+TGG	+	Chr1:80205473-80205492	None:intergenic	35.0%
	TGTGATGTGATTATTTGCAG+TGG	-	Chr1:80205002-80205021	MsG0180004600.01.T01:intron	35.0%
	TGTTCTGTGGTTTAACCTTT+AGG	-	Chr1:80204504-80204523	MsG0180004600.01.T01:CDS	35.0%
	TGTTTACCAGGATCTTCTTA+CGG	-	Chr1:80204062-80204081	MsG0180004600.01.T01:three_prime_UTR	35.0%
	TTGACATTGTTGACACTTTC+AGG	-	Chr1:80205122-80205141	MsG0180004600.01.T01:intron	35.0%
!	ACTTTTCTCTACTTTGCCTA+TGG	-	Chr1:80205473-80205492	MsG0180004600.01.T01:intron	35.0%
!	CGATAGTACTCTGGTAATTT+TGG	-	Chr1:80205568-80205587	MsG0180004600.01.T01:five_prime_UTR	35.0%
!!	CATCAATGTTGCAGTTTTGT+TGG	-	Chr1:80205386-80205405	MsG0180004600.01.T01:intron	35.0%
!!	TTGAACAACTCTTGCTTTTC+TGG	+	Chr1:80205225-80205244	None:intergenic	35.0%
!!!	TCAATGTTGCAGTTTTGTTG+GGG	-	Chr1:80205388-80205407	MsG0180004600.01.T01:intron	35.0%
	AAGATCCTGGTAAACAAGCA+TGG	+	Chr1:80204058-80204077	None:intergenic	40.0%
	AGTTGTTGTGTTTGTGACAG+AGG	-	Chr1:80204582-80204601	MsG0180004600.01.T01:intron	40.0%
	CCTTGTAGTAAGCAAACACA+AGG	+	Chr1:80205436-80205455	None:intergenic	40.0%
	CCTTGTGTTTGCTTACTACA+AGG	-	Chr1:80205433-80205452	MsG0180004600.01.T01:intron	40.0%
	CTTGATTTCCTTCAAGCCAT+AGG	+	Chr1:80205492-80205511	None:intergenic	40.0%
	GGTTAGGCTAATCGTGTTTA+AGG	+	Chr1:80204654-80204673	None:intergenic	40.0%
	GTAGAGAAAAGTTGGATCAG+TGG	+	Chr1:80205465-80205484	None:intergenic	40.0%
	GTGTTTGCTTACTACAAGGA+TGG	-	Chr1:80205437-80205456	MsG0180004600.01.T01:intron	40.0%
	GTTTACCAGGATCTTCTTAC+GGG	-	Chr1:80204063-80204082	MsG0180004600.01.T01:three_prime_UTR	40.0%
!!	TATTTGCAGTGGGTTGTTCA+AGG	-	Chr1:80205013-80205032	MsG0180004600.01.T01:intron	40.0%
	CTACTTTGCCTATGGCTTGA+AGG	-	Chr1:80205481-80205500	MsG0180004600.01.T01:intron	45.0%
	CTCTGACTCATTCCTCTACA+AGG	-	Chr1:80204840-80204859	MsG0180004600.01.T01:intron	45.0%
	CTGGTAAACAAGCATGGTTG+CGG	+	Chr1:80204052-80204071	None:intergenic	45.0%
	GAATGGAATGTTGTGGGAAG+TGG	-	Chr1:80204870-80204889	MsG0180004600.01.T01:intron	45.0%
	GGAGCAGTGGATGTGAATAT+TGG	-	Chr1:80205034-80205053	MsG0180004600.01.T01:intron	45.0%
	GTGAGATTGAGCAATAGAGG+TGG	+	Chr1:80203974-80203993	None:intergenic	45.0%
	GTTTACCCGTAAGAAGATCC+TGG	+	Chr1:80204071-80204090	None:intergenic	45.0%
	TGTTGACACTTTCAGGCTTC+AGG	-	Chr1:80205129-80205148	MsG0180004600.01.T01:intron	45.0%
!!!	GGTCTTTGAGTTTTGGGAGA+AGG	+	Chr1:80205275-80205294	None:intergenic	45.0%
!!!	ATTCTATTAAATTAAAATTT+TGG	+	Chr1:80204544-80204563	None:intergenic	5.0%
	CGCAACCATGCTTGTTTACC+AGG	-	Chr1:80204050-80204069	MsG0180004600.01.T01:three_prime_UTR	50.0%
	GGAATGTTGTGGGAAGTGGA+AGG	-	Chr1:80204874-80204893	MsG0180004600.01.T01:intron	50.0%
	GGGAAGTGGAAGGAAAGGTT+AGG	-	Chr1:80204884-80204903	MsG0180004600.01.T01:intron	50.0%
	GTTGTGGGAAGTGGAAGGAA+AGG	-	Chr1:80204879-80204898	MsG0180004600.01.T01:intron	50.0%
!	GGGGAGAGTATGCATGATGA+TGG	-	Chr1:80205407-80205426	MsG0180004600.01.T01:intron	50.0%
	GGTGCTAACCCTTCTGCTGA+GGG	-	Chr1:80205055-80205074	MsG0180004600.01.T01:intron	55.0%
!	GTGGGTTGTTCAAGGAGCAG+TGG	-	Chr1:80205021-80205040	MsG0180004600.01.T01:intron	55.0%
!	TGGTGCTAACCCTTCTGCTG+AGG	-	Chr1:80205054-80205073	MsG0180004600.01.T01:intron	55.0%
	CGTCACCACCCTCAGCAGAA+GGG	+	Chr1:80205066-80205085	None:intergenic	60.0%
	GCTAACCCTTCTGCTGAGGG+TGG	-	Chr1:80205058-80205077	MsG0180004600.01.T01:intron	60.0%
	TCGTCACCACCCTCAGCAGA+AGG	+	Chr1:80205067-80205086	None:intergenic	60.0%
!	GAGGGTGGTGACGAGGATGA+CGG	-	Chr1:80205073-80205092	MsG0180004600.01.T01:intron	60.0%
!	TTCTGCTGAGGGTGGTGACG+AGG	-	Chr1:80205066-80205085	MsG0180004600.01.T01:intron	60.0%

Chromosome	Type	Strat	End	Strand	Name
Chr1	gene	80203885	80205723	80203885	ID=MsG0180004600.01;Name=MsG0180004600.01
Chr1	mRNA	80203885	80205669	80203885	ID=MsG0180004600.01.T01;Parent=MsG0180004600.01;Name=MsG0180004600.01.T01;_AED=0.49;_eAED=0.49;_QI=96\|1\|1\|1\|0.75\|0.4\|5\|439\|88
Chr1	exon	80205524	80205614	80205524	ID=MsG0180004600.01.T01:exon:45856;Parent=MsG0180004600.01.T01
Chr1	exon	80205637	80205669	80205637	ID=MsG0180004600.01.T01:exon:45855;Parent=MsG0180004600.01.T01
Chr1	five_prime_UTR	80205637	80205669	80205637	ID=MsG0180004600.01.T01:five_prime_utr;Parent=MsG0180004600.01.T01
Chr1	five_prime_UTR	80205552	80205614	80205552	ID=MsG0180004600.01.T01:five_prime_utr;Parent=MsG0180004600.01.T01
Chr1	CDS	80205524	80205551	80205524	ID=MsG0180004600.01.T01:cds;Parent=MsG0180004600.01.T01
Chr1	CDS	80204708	80204781	80204708	ID=MsG0180004600.01.T01:cds;Parent=MsG0180004600.01.T01
Chr1	CDS	80204422	80204586	80204422	ID=MsG0180004600.01.T01:cds;Parent=MsG0180004600.01.T01
Chr1	three_prime_UTR	80204307	80204421	80204307	ID=MsG0180004600.01.T01:three_prime_utr;Parent=MsG0180004600.01.T01
Chr1	three_prime_UTR	80203885	80204208	80203885	ID=MsG0180004600.01.T01:three_prime_utr;Parent=MsG0180004600.01.T01
Chr1	mRNA	80203885	80205723	80203885	ID=MsG0180004600.01.T02;Parent=MsG0180004600.01;Name=MsG0180004600.01.T02;_AED=0.49;_eAED=0.49;_QI=172\|1\|1\|1\|1\|0.75\|4\|439\|88
Chr1	exon	80205524	80205723	80205524	ID=MsG0180004600.01.T02:exon:45860;Parent=MsG0180004600.01.T02
Chr1	five_prime_UTR	80205552	80205723	80205552	ID=MsG0180004600.01.T02:five_prime_utr;Parent=MsG0180004600.01.T02
Chr1	CDS	80205524	80205551	80205524	ID=MsG0180004600.01.T02:cds;Parent=MsG0180004600.01.T02
Chr1	CDS	80204708	80204781	80204708	ID=MsG0180004600.01.T02:cds;Parent=MsG0180004600.01.T02
Chr1	CDS	80204422	80204586	80204422	ID=MsG0180004600.01.T02:cds;Parent=MsG0180004600.01.T02
Chr1	three_prime_UTR	80204307	80204421	80204307	ID=MsG0180004600.01.T02:three_prime_utr;Parent=MsG0180004600.01.T02
Chr1	three_prime_UTR	80203885	80204208	80203885	ID=MsG0180004600.01.T02:three_prime_utr;Parent=MsG0180004600.01.T02

Gene Sequence

>MsG0180004600.01.T02

ATGCTTGTTTACCAGGATCTTCTTACGGGTGATGAGCTTCTCTCTGACTCATTCCTCTACAAGGAAATTCAGAATGGAATGTTGTGGGAAGTGGAAGGAAAGTGGGTTGTTCAAGGAGCAGTGGATGTGAATATTGGTGCTAACCCTTCTGCTGAGGGTGGTGACGAGGATGACGGTGTTGATGATCAAGCTGTCAAAGTTGTTGACATTGTTGACACTTTCAGGCTTCAGGAGCAACCAGCTTTTGATAAGTTGTTACTTATATGA

>MsG0180004600.01.T01

Protein sequence

>MsG0180004600.01.T02

MLVYQDLLTGDELLSDSFLYKEIQNGMLWEVEGKWVVQGAVDVNIGANPSAEGGDEDDGVDDQAVKVVDIVDTFRLQEQPAFDKLLLI*

>MsG0180004600.01.T01

MLVYQDLLTGDELLSDSFLYKEIQNGMLWEVEGKWVVQGAVDVNIGANPSAEGGDEDDGVDDQAVKVVDIVDTFRLQEQPAFDKLLLI*