AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0680030895.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680030895.01.T01 MTR_6g011340 82.692 156 27 0 1 156 310 465 2.37e-89 270
MsG0680030895.01.T01 MTR_6g014050 80.769 156 30 0 1 156 311 466 9.02e-89 268
MsG0680030895.01.T01 MTR_6g014270 80.128 156 31 0 1 156 309 464 1.65e-88 267
MsG0680030895.01.T01 MTR_6g013990 80.128 156 31 0 1 156 308 463 2.92e-86 261
MsG0680030895.01.T01 MTR_6g014170 79.487 156 32 0 1 156 292 447 3.69e-86 261
MsG0680030895.01.T01 MTR_6g014187 77.564 156 35 0 1 156 310 465 3.25e-85 259
MsG0680030895.01.T01 MTR_6g013450 76.282 156 37 0 1 156 311 466 8.18e-85 258
MsG0680030895.01.T01 MTR_6g014220 76.923 156 36 0 1 156 308 463 9.69e-85 258
MsG0680030895.01.T01 MTR_6g014250 76.923 156 36 0 1 156 308 463 1.18e-84 258
MsG0680030895.01.T01 MTR_6g014200 76.923 156 36 0 1 156 307 462 1.26e-84 257
MsG0680030895.01.T01 MTR_6g014040 77.564 156 35 0 1 156 311 466 1.55e-84 257
MsG0680030895.01.T01 MTR_8g059425 77.273 154 35 0 1 154 308 461 3.39e-84 256
MsG0680030895.01.T01 MTR_6g014190 73.718 156 41 0 1 156 117 272 4.00e-84 250
MsG0680030895.01.T01 MTR_5g058320 75.000 156 39 0 1 156 295 450 6.92e-84 255
MsG0680030895.01.T01 MTR_8g007585 76.282 156 37 0 1 156 222 377 3.35e-83 251
MsG0680030895.01.T01 MTR_6g014150 75.000 156 39 0 1 156 307 462 5.18e-83 253
MsG0680030895.01.T01 MTR_6g013900 73.418 158 42 0 1 158 309 466 2.61e-82 251
MsG0680030895.01.T01 MTR_6g013960 75.641 156 38 0 1 156 310 465 2.77e-82 251
MsG0680030895.01.T01 MTR_3g008010 74.359 156 40 0 1 156 308 463 3.23e-82 251
MsG0680030895.01.T01 MTR_6g014240 75.641 156 38 0 1 156 277 432 4.70e-82 250
MsG0680030895.01.T01 MTR_7g011470 73.077 156 42 0 1 156 292 447 7.58e-82 250
MsG0680030895.01.T01 MTR_7g011470 73.077 156 42 0 1 156 296 451 1.28e-81 249
MsG0680030895.01.T01 MTR_6g014290 73.718 156 41 0 1 156 308 463 1.33e-81 249
MsG0680030895.01.T01 MTR_6g014300 73.077 156 42 0 1 156 296 451 8.05e-81 247
MsG0680030895.01.T01 MTR_6g013440 73.856 153 40 0 1 153 311 463 4.53e-80 246
MsG0680030895.01.T01 MTR_0288s0020 72.436 156 43 0 1 156 291 446 1.23e-79 244
MsG0680030895.01.T01 MTR_6g014020 73.077 156 42 0 1 156 310 465 2.06e-79 244
MsG0680030895.01.T01 MTR_6g014310 73.718 156 41 0 1 156 311 466 5.46e-79 243
MsG0680030895.01.T01 MTR_6g013920 71.519 158 45 0 1 158 309 466 1.25e-78 242
MsG0680030895.01.T01 MTR_8g043470 70.513 156 46 0 1 156 208 363 3.08e-77 235
MsG0680030895.01.T01 MTR_0477s0010 71.154 156 45 0 1 156 147 302 8.07e-77 232
MsG0680030895.01.T01 MTR_5g066390 74.825 143 36 0 14 156 58 200 6.07e-75 224
MsG0680030895.01.T01 MTR_6g014185 74.615 130 32 1 28 156 201 330 6.36e-66 206
MsG0680030895.01.T01 MTR_2086s0010 51.592 157 75 1 1 156 1 157 6.36e-60 184
MsG0680030895.01.T01 MTR_1996s0010 51.592 157 75 1 1 156 1 157 6.36e-60 184
MsG0680030895.01.T01 MTR_3g079480 54.140 157 71 1 1 156 318 474 3.91e-58 189
MsG0680030895.01.T01 MTR_3g479610 52.866 157 73 1 1 156 142 298 6.82e-58 184
MsG0680030895.01.T01 MTR_3g479490 51.592 157 75 1 1 156 303 459 1.12e-57 187
MsG0680030895.01.T01 MTR_5g464760 54.902 153 68 1 1 153 310 461 1.03e-56 185
MsG0680030895.01.T01 MTR_0891s0010 50.318 157 77 1 1 156 119 275 2.27e-56 179
MsG0680030895.01.T01 MTR_3g479520 52.229 157 74 1 1 156 312 468 5.31e-56 184
MsG0680030895.01.T01 MTR_0036s0220 54.667 150 67 1 1 150 308 456 1.86e-55 182
MsG0680030895.01.T01 MTR_5g464810 54.667 150 67 1 1 150 308 456 6.57e-55 181
MsG0680030895.01.T01 MTR_5g064240 54.667 150 67 1 1 150 308 456 6.57e-55 181
MsG0680030895.01.T01 MTR_6g014000 70.536 112 33 0 42 153 27 138 3.55e-53 176
MsG0680030895.01.T01 MTR_4g094220 52.866 157 73 1 1 156 308 464 1.31e-52 174
MsG0680030895.01.T01 MTR_2g008210 51.899 158 73 2 1 155 304 461 2.48e-51 171
MsG0680030895.01.T01 MTR_6g014186 54.487 156 33 1 1 156 307 424 3.46e-48 162
MsG0680030895.01.T01 MTR_3g479470 52.564 156 74 0 1 156 310 465 7.97e-46 157
MsG0680030895.01.T01 MTR_6g014160 50.993 151 21 2 6 156 281 378 6.29e-40 139
MsG0680030895.01.T01 MTR_3g069710 42.384 151 85 1 1 149 280 430 4.48e-38 136
MsG0680030895.01.T01 MTR_6g013890 58.537 123 16 3 18 140 157 244 1.33e-36 127
MsG0680030895.01.T01 MTR_6g013680 49.359 156 27 3 1 156 257 360 4.06e-36 129
MsG0680030895.01.T01 MTR_1g107380 36.875 160 97 1 1 156 299 458 1.80e-33 124
MsG0680030895.01.T01 MTR_5g031840 40.299 134 79 1 1 134 294 426 5.23e-33 122
MsG0680030895.01.T01 MTR_5g031860 37.821 156 95 2 1 156 302 455 2.26e-32 120
MsG0680030895.01.T01 MTR_6g013435 45.513 156 35 2 1 153 181 289 3.00e-32 117
MsG0680030895.01.T01 MTR_3g069690 34.807 181 107 3 1 170 277 457 6.60e-32 119
MsG0680030895.01.T01 MTR_1g107350 35.366 164 98 2 1 156 291 454 1.17e-31 119
MsG0680030895.01.T01 MTR_5g031830 38.462 156 94 2 1 156 303 456 3.39e-31 117
MsG0680030895.01.T01 MTR_3g049970 36.585 164 96 2 1 156 292 455 4.00e-31 117
MsG0680030895.01.T01 MTR_8g064870 36.310 168 95 3 1 156 292 459 4.36e-31 117
MsG0680030895.01.T01 MTR_1g107360 37.267 161 85 3 4 156 295 447 4.85e-31 117
MsG0680030895.01.T01 MTR_5g016480 40.397 151 77 4 13 152 307 455 3.17e-30 115
MsG0680030895.01.T01 MTR_4g064987 38.095 147 88 1 5 148 277 423 3.57e-30 114
MsG0680030895.01.T01 MTR_4g064987 38.095 147 88 1 5 148 283 429 4.07e-30 114
MsG0680030895.01.T01 MTR_1g107365 34.591 159 93 2 2 156 326 477 9.07e-30 114
MsG0680030895.01.T01 MTR_1g107375 35.185 162 91 3 1 156 286 439 1.13e-29 113
MsG0680030895.01.T01 MTR_1g107285 36.646 161 89 2 3 156 295 449 3.38e-28 109
MsG0680030895.01.T01 MTR_4g094920 33.908 174 102 3 1 161 301 474 8.88e-28 108
MsG0680030895.01.T01 MTR_7g013240 33.533 167 101 3 1 163 272 432 9.14e-28 108
MsG0680030895.01.T01 MTR_8g008990 36.686 169 87 5 1 149 279 447 1.08e-27 108
MsG0680030895.01.T01 MTR_8g009050 34.302 172 95 3 1 154 279 450 2.26e-27 107
MsG0680030895.01.T01 MTR_8g064880 34.615 156 90 2 1 144 294 449 2.47e-27 107
MsG0680030895.01.T01 MTR_8g009055 33.721 172 96 4 1 154 279 450 2.69e-27 107
MsG0680030895.01.T01 MTR_6g033725 33.544 158 97 3 2 151 285 442 3.38e-27 106
MsG0680030895.01.T01 MTR_7g013200 33.333 156 94 3 1 152 272 421 4.14e-27 106
MsG0680030895.01.T01 MTR_8g008970 33.939 165 93 4 1 149 279 443 8.26e-27 106
MsG0680030895.01.T01 MTR_8g008970 41.176 119 65 3 36 149 649 767 1.12e-21 91.7
MsG0680030895.01.T01 MTR_7g013260 33.533 167 101 3 1 163 273 433 1.09e-26 105
MsG0680030895.01.T01 MTR_7g080950 35.625 160 94 3 1 156 279 433 1.91e-26 104
MsG0680030895.01.T01 MTR_8g009067 33.939 165 93 4 1 149 161 325 6.88e-26 102
MsG0680030895.01.T01 MTR_8g009073 33.939 165 93 4 1 149 150 314 7.17e-26 101
MsG0680030895.01.T01 MTR_1g107325 38.333 120 68 1 43 156 219 338 1.34e-25 101
MsG0680030895.01.T01 MTR_8g009067 33.939 165 93 4 1 149 279 443 1.86e-25 102
MsG0680030895.01.T01 MTR_8g009073 33.939 165 93 4 1 149 279 443 2.19e-25 101
MsG0680030895.01.T01 MTR_1g032490 35.976 164 97 2 1 156 293 456 2.77e-25 101
MsG0680030895.01.T01 MTR_0475s0030 66.154 65 22 0 63 127 11 75 3.77e-25 93.6
MsG0680030895.01.T01 MTR_4g095008 32.121 165 103 2 1 156 286 450 6.08e-25 100
MsG0680030895.01.T01 MTR_6g038230 33.125 160 98 3 1 156 286 440 6.78e-25 100
MsG0680030895.01.T01 MTR_8g012650 34.320 169 91 4 1 149 282 450 7.11e-25 100
MsG0680030895.01.T01 MTR_6g033660 31.638 177 102 4 2 159 287 463 7.66e-25 100
MsG0680030895.01.T01 MTR_6g038200 32.500 160 99 3 1 156 286 440 7.79e-25 100
MsG0680030895.01.T01 MTR_3g009490 32.738 168 91 5 5 151 3 169 9.19e-25 95.5
MsG0680030895.01.T01 MTR_8g009063 32.934 167 94 4 1 149 286 452 1.04e-24 100
MsG0680030895.01.T01 MTR_8g083280 35.583 163 91 3 1 156 292 447 1.31e-24 99.8
MsG0680030895.01.T01 MTR_8g012730 33.136 169 93 4 1 149 119 287 1.36e-24 97.8
MsG0680030895.01.T01 MTR_1g019520 35.542 166 90 5 1 149 26 191 1.39e-24 95.9
MsG0680030895.01.T01 MTR_6g033625 34.356 163 99 3 2 156 288 450 1.40e-24 99.4
MsG0680030895.01.T01 MTR_7g013220 33.784 148 87 3 1 140 283 427 1.88e-24 99.0
MsG0680030895.01.T01 MTR_0184s0040 31.395 172 102 4 1 156 295 466 2.73e-24 99.0
MsG0680030895.01.T01 MTR_0078s0190 31.395 172 102 4 1 156 295 466 2.73e-24 99.0
MsG0680030895.01.T01 MTR_3g084530 35.632 174 101 3 1 163 292 465 2.77e-24 98.6
MsG0680030895.01.T01 MTR_3g009510 32.759 174 89 5 2 151 288 457 3.00e-24 98.6
MsG0680030895.01.T01 MTR_7g013180 36.054 147 85 3 18 160 297 438 3.01e-24 98.6
MsG0680030895.01.T01 MTR_6g005600 33.333 165 91 5 4 149 282 446 3.47e-24 98.6
MsG0680030895.01.T01 MTR_8g083290 36.552 145 83 4 19 156 307 449 5.09e-24 97.8
MsG0680030895.01.T01 MTR_7g117170 31.953 169 97 4 1 151 288 456 6.18e-24 97.8
MsG0680030895.01.T01 MTR_8g012635 40.870 115 63 2 40 149 336 450 9.07e-24 97.4
MsG0680030895.01.T01 MTR_1g107315 34.756 164 99 2 1 156 291 454 1.05e-23 97.1
MsG0680030895.01.T01 MTR_1g019510 32.530 166 95 4 1 149 277 442 1.10e-23 97.1
MsG0680030895.01.T01 MTR_3g084540 34.857 175 102 3 1 163 292 466 1.22e-23 97.1
MsG0680030895.01.T01 MTR_6g033675 33.129 163 91 5 2 151 288 445 1.47e-23 96.7
MsG0680030895.01.T01 MTR_7g080940 33.987 153 92 3 1 149 284 431 1.47e-23 96.7
MsG0680030895.01.T01 MTR_6g038240 32.500 160 99 3 1 156 286 440 1.79e-23 96.3
MsG0680030895.01.T01 MTR_6g033615 33.129 163 101 3 2 156 274 436 3.27e-23 95.5
MsG0680030895.01.T01 MTR_6g038220 31.288 163 97 3 1 156 285 439 3.40e-23 95.5
MsG0680030895.01.T01 MTR_0184s0030 31.325 166 97 4 1 149 281 446 5.87e-23 95.1
MsG0680030895.01.T01 MTR_6g488280 31.325 166 97 3 1 149 278 443 6.17e-23 94.7
MsG0680030895.01.T01 MTR_0428s0010 31.325 166 97 3 1 149 278 443 6.17e-23 94.7
MsG0680030895.01.T01 MTR_7g080935 33.987 153 92 3 1 149 284 431 6.36e-23 94.7
MsG0680030895.01.T01 MTR_6g038300 32.026 153 96 2 1 149 286 434 8.04e-23 94.4
MsG0680030895.01.T01 MTR_8g077590 32.298 161 94 4 1 146 282 442 8.52e-23 94.4
MsG0680030895.01.T01 MTR_7g046490 30.769 169 99 3 1 151 276 444 1.01e-22 94.4
MsG0680030895.01.T01 MTR_5g019580 29.480 173 100 4 1 151 287 459 1.03e-22 94.4
MsG0680030895.01.T01 MTR_8g012630 31.361 169 96 4 1 149 226 394 1.22e-22 93.6
MsG0680030895.01.T01 MTR_5g019580 29.480 173 100 4 1 151 311 483 1.30e-22 94.4
MsG0680030895.01.T01 MTR_8g006710 31.176 170 100 4 1 153 279 448 1.34e-22 94.0
MsG0680030895.01.T01 MTR_7g047030 32.335 167 93 5 1 149 280 444 1.61e-22 93.6
MsG0680030895.01.T01 MTR_7g047270 32.335 167 93 5 1 149 280 444 1.61e-22 93.6
MsG0680030895.01.T01 MTR_4g128690 37.879 132 77 2 19 149 304 431 1.76e-22 93.6
MsG0680030895.01.T01 MTR_5g035560 34.839 155 93 3 1 151 282 432 2.26e-22 93.6
MsG0680030895.01.T01 MTR_7g071040 33.136 169 96 3 5 156 308 476 2.61e-22 93.2
MsG0680030895.01.T01 MTR_6g023665 31.325 166 97 3 1 149 285 450 3.31e-22 92.8
MsG0680030895.01.T01 MTR_7g070610 32.353 170 97 3 5 156 303 472 3.40e-22 92.8
MsG0680030895.01.T01 MTR_0078s0010 30.909 165 98 4 1 149 280 444 3.53e-22 92.8
MsG0680030895.01.T01 MTR_5g004940 31.646 158 93 2 1 156 219 363 4.18e-22 92.0
MsG0680030895.01.T01 MTR_7g117405 32.164 171 95 4 4 156 299 466 5.28e-22 92.4
MsG0680030895.01.T01 MTR_5g075440 40.741 108 56 2 48 147 325 432 5.41e-22 92.0
MsG0680030895.01.T01 MTR_4g024020 34.682 173 83 5 5 151 304 472 6.84e-22 92.0
MsG0680030895.01.T01 MTR_7g070780 30.636 173 103 4 1 156 297 469 7.23e-22 92.0
MsG0680030895.01.T01 MTR_3g084520 33.908 174 104 4 1 163 292 465 7.54e-22 92.0
MsG0680030895.01.T01 MTR_4g008630 40.777 103 55 1 50 146 336 438 8.15e-22 91.7
MsG0680030895.01.T01 MTR_5g035580 32.258 155 97 2 1 151 284 434 1.04e-21 91.3
MsG0680030895.01.T01 MTR_4g128720 34.091 132 82 2 19 149 307 434 1.30e-21 91.3
MsG0680030895.01.T01 MTR_1g029540 30.625 160 97 3 1 146 276 435 1.99e-21 90.5
MsG0680030895.01.T01 MTR_8g009840 33.136 169 91 5 1 149 338 504 2.53e-21 90.5
MsG0680030895.01.T01 MTR_0078s0060 29.697 165 100 4 1 149 279 443 2.94e-21 90.1
MsG0680030895.01.T01 MTR_5g072810 40.541 111 56 2 46 146 319 429 3.15e-21 90.1
MsG0680030895.01.T01 MTR_7g070860 30.588 170 93 3 1 156 290 448 3.72e-21 90.1
MsG0680030895.01.T01 MTR_7g102550 35.088 171 89 6 4 152 300 470 4.63e-21 89.7
MsG0680030895.01.T01 MTR_8g090095 29.697 165 99 3 1 148 293 457 6.49e-21 89.4
MsG0680030895.01.T01 MTR_8g006260 32.530 166 95 4 1 149 283 448 6.63e-21 89.4
MsG0680030895.01.T01 MTR_8g088560 34.615 156 92 4 2 151 287 438 7.33e-21 89.0
MsG0680030895.01.T01 MTR_7g070800 30.636 173 103 4 1 156 289 461 9.27e-21 89.0
MsG0680030895.01.T01 MTR_8g012745 32.335 167 94 5 1 149 282 447 9.58e-21 88.6
MsG0680030895.01.T01 MTR_4g031800 31.325 166 97 3 1 149 286 451 1.13e-20 88.6
MsG0680030895.01.T01 MTR_4g485630 30.233 172 103 4 1 156 289 459 1.37e-20 88.2
MsG0680030895.01.T01 MTR_5g098930 29.825 171 94 4 3 147 278 448 2.18e-20 87.8
MsG0680030895.01.T01 MTR_8g006730 30.000 170 102 4 1 153 280 449 2.37e-20 87.8
MsG0680030895.01.T01 MTR_7g070940 32.000 175 98 6 1 156 286 458 3.63e-20 87.0
MsG0680030895.01.T01 MTR_7g102490 31.977 172 88 4 5 151 304 471 3.69e-20 87.0
MsG0680030895.01.T01 MTR_8g027870 30.625 160 93 4 8 149 292 451 3.89e-20 87.0
MsG0680030895.01.T01 MTR_8g027885 31.250 160 92 4 8 149 292 451 4.16e-20 87.0
MsG0680030895.01.T01 MTR_7g055710 30.636 173 103 4 1 156 297 469 4.59e-20 87.0
MsG0680030895.01.T01 MTR_7g080900 34.815 135 78 4 20 149 305 434 5.92e-20 86.3
MsG0680030895.01.T01 MTR_4g117890 35.537 121 64 2 50 156 340 460 6.40e-20 86.3
MsG0680030895.01.T01 MTR_8g066610 33.333 162 93 4 5 152 303 463 7.78e-20 86.3
MsG0680030895.01.T01 MTR_7g102450 31.214 173 99 4 4 156 285 457 1.23e-19 85.5
MsG0680030895.01.T01 MTR_7g102460 33.333 168 91 4 5 151 302 469 1.28e-19 85.5
MsG0680030895.01.T01 MTR_4g117950 34.884 129 69 3 43 156 320 448 2.40e-19 84.7
MsG0680030895.01.T01 MTR_5g072830 37.838 111 59 2 46 146 314 424 4.64e-19 84.0
MsG0680030895.01.T01 MTR_7g070660 30.588 170 100 4 5 156 296 465 4.77e-19 84.0
MsG0680030895.01.T01 MTR_7g102560 32.353 170 92 4 5 151 299 468 5.53e-19 84.0
MsG0680030895.01.T01 MTR_1g062380 32.903 155 85 4 5 140 308 462 6.31e-19 83.6
MsG0680030895.01.T01 MTR_5g098960 30.714 140 91 2 1 138 283 418 7.48e-19 83.2
MsG0680030895.01.T01 MTR_2g098430 30.601 183 97 6 1 157 289 467 7.63e-19 83.6
MsG0680030895.01.T01 MTR_3g031400 31.169 154 89 3 1 146 281 425 8.97e-19 83.2
MsG0680030895.01.T01 MTR_5g087620 30.120 166 103 4 1 153 307 472 9.43e-19 83.2
MsG0680030895.01.T01 MTR_5g072840 37.838 111 59 2 46 146 314 424 9.46e-19 83.2
MsG0680030895.01.T01 MTR_5g090580 29.825 171 94 3 3 147 285 455 1.06e-18 82.8
MsG0680030895.01.T01 MTR_5g072860 30.968 155 90 3 1 147 297 442 1.41e-18 82.4
MsG0680030895.01.T01 MTR_2g034990 35.537 121 64 2 50 156 347 467 1.50e-18 82.4
MsG0680030895.01.T01 MTR_7g070995 34.646 127 68 3 45 156 4 130 1.55e-18 78.6
MsG0680030895.01.T01 MTR_7g070810 30.120 166 97 4 5 151 291 456 2.22e-18 82.0
MsG0680030895.01.T01 MTR_2g008226 34.416 154 92 4 1 148 298 448 2.70e-18 81.6
MsG0680030895.01.T01 MTR_4g108250 29.586 169 102 3 5 156 305 473 3.18e-18 81.6
MsG0680030895.01.T01 MTR_4g117980 31.818 132 76 2 50 167 347 478 3.88e-18 81.3
MsG0680030895.01.T01 MTR_5g045970 31.613 155 87 3 5 140 307 461 4.28e-18 81.3
MsG0680030895.01.T01 MTR_6g035185 31.298 131 77 2 50 167 349 479 4.58e-18 81.3
MsG0680030895.01.T01 MTR_5g090670 29.268 164 99 3 4 151 288 450 4.67e-18 81.3
MsG0680030895.01.T01 MTR_2g035020 34.711 121 65 2 50 156 347 467 5.03e-18 80.9
MsG0680030895.01.T01 MTR_7g071050 30.357 168 97 4 5 152 257 424 5.59e-18 80.9
MsG0680030895.01.T01 MTR_7g012120 28.191 188 113 5 2 167 293 480 5.72e-18 80.9
MsG0680030895.01.T01 MTR_5g090660 28.313 166 98 4 4 151 284 446 6.32e-18 80.9
MsG0680030895.01.T01 MTR_5g040030 30.178 169 101 4 5 156 305 473 6.62e-18 80.9
MsG0680030895.01.T01 MTR_5g072820 37.273 110 59 2 47 146 315 424 6.89e-18 80.5
MsG0680030895.01.T01 MTR_7g070910 29.586 169 102 4 5 156 302 470 8.31e-18 80.5
MsG0680030895.01.T01 MTR_5g045960 31.579 171 92 5 1 149 296 463 8.77e-18 80.5
MsG0680030895.01.T01 MTR_4g485620 30.723 166 98 4 4 156 279 440 1.19e-17 80.1
MsG0680030895.01.T01 MTR_7g039550 30.539 167 101 3 5 156 81 247 1.68e-17 78.2
MsG0680030895.01.T01 MTR_0536s0010 33.333 129 71 3 43 156 334 462 2.13e-17 79.3
MsG0680030895.01.T01 MTR_5g067170 35.537 121 64 2 50 156 345 465 2.40e-17 79.0
MsG0680030895.01.T01 MTR_8g465670 29.412 170 98 4 1 151 278 444 2.68e-17 79.0
MsG0680030895.01.T01 MTR_4g118000 35.833 120 59 2 50 151 332 451 2.70e-17 79.0
MsG0680030895.01.T01 MTR_5g090610 28.485 165 101 4 3 151 271 434 3.07e-17 78.6
MsG0680030895.01.T01 MTR_5g090620 27.273 165 102 3 4 151 286 449 3.42e-17 78.6
MsG0680030895.01.T01 MTR_3g031450 29.870 154 91 3 1 146 283 427 3.53e-17 78.6
MsG0680030895.01.T01 MTR_5g090630 26.984 189 108 4 3 161 276 464 3.64e-17 78.6
MsG0680030895.01.T01 MTR_7g067330 30.065 153 92 5 1 147 263 406 4.05e-17 78.2
MsG0680030895.01.T01 MTR_8g044140 30.000 170 100 5 5 156 266 434 6.33e-17 77.8
MsG0680030895.01.T01 MTR_2g035040 33.058 121 67 2 50 156 252 372 7.18e-17 77.4
MsG0680030895.01.T01 MTR_0536s0020 31.061 132 77 2 50 167 345 476 7.71e-17 77.8
MsG0680030895.01.T01 MTR_5g090700 30.233 129 76 2 35 151 331 457 1.11e-16 77.0
MsG0680030895.01.T01 MTR_5g070090 33.621 116 62 2 43 143 329 444 1.33e-16 77.0
MsG0680030895.01.T01 MTR_5g090600 30.303 132 86 2 3 134 281 406 1.65e-16 76.6
MsG0680030895.01.T01 MTR_4g117960 29.545 132 79 2 50 167 346 477 1.68e-16 76.6
MsG0680030895.01.T01 MTR_1g040310 28.144 167 105 4 5 156 303 469 2.11e-16 76.3
MsG0680030895.01.T01 MTR_5g029800 31.818 132 76 2 50 167 343 474 3.11e-16 75.9
MsG0680030895.01.T01 MTR_8g006220 34.746 118 68 3 40 151 337 451 3.49e-16 75.9
MsG0680030895.01.T01 MTR_2g059240 32.090 134 84 3 39 167 334 465 3.63e-16 75.5
MsG0680030895.01.T01 MTR_7g067120 30.065 153 92 5 1 147 263 406 4.94e-16 75.1
MsG0680030895.01.T01 MTR_8g032950 30.303 132 78 2 50 167 346 477 5.55e-16 75.1
MsG0680030895.01.T01 MTR_7g070740 30.178 169 101 5 5 156 301 469 5.92e-16 75.1
MsG0680030895.01.T01 MTR_7g070930 34.821 112 70 2 5 113 305 416 6.48e-16 75.1
MsG0680030895.01.T01 MTR_8g074550 32.710 107 64 3 53 151 363 469 7.19e-16 74.7
MsG0680030895.01.T01 MTR_8g006270 25.862 174 109 4 1 155 276 448 1.02e-15 74.3
MsG0680030895.01.T01 MTR_5g039900 27.545 167 106 3 5 156 303 469 1.02e-15 74.3
MsG0680030895.01.T01 MTR_7g470610 31.148 122 81 2 1 119 154 275 1.06e-15 73.6
MsG0680030895.01.T01 MTR_7g070583 31.148 122 81 2 1 119 154 275 1.06e-15 73.6
MsG0680030895.01.T01 MTR_0009s0240 27.451 153 102 3 1 144 282 434 3.15e-15 72.8
MsG0680030895.01.T01 MTR_5g066410 30.345 145 94 4 1 139 267 410 3.29e-15 72.8
MsG0680030895.01.T01 MTR_5g016660 26.190 168 108 3 5 156 302 469 3.95e-15 72.8
MsG0680030895.01.T01 MTR_2g046750 31.081 148 77 3 20 151 301 439 4.17e-15 72.8
MsG0680030895.01.T01 MTR_2g040530 32.394 142 75 3 20 140 300 441 5.77e-15 72.0
MsG0680030895.01.T01 MTR_5g070040 35.088 114 61 2 43 143 336 449 6.20e-15 72.0
MsG0680030895.01.T01 MTR_0536s0030 33.043 115 63 2 50 150 217 331 8.70e-15 71.2
MsG0680030895.01.T01 MTR_4g082810 31.193 109 69 2 1 103 287 395 1.41e-14 70.9
MsG0680030895.01.T01 MTR_6g035265 26.718 131 83 2 50 167 340 470 2.10e-14 70.5
MsG0680030895.01.T01 MTR_6g035295 27.381 168 106 3 5 156 303 470 2.12e-14 70.5
MsG0680030895.01.T01 MTR_7g102520 29.545 176 94 5 5 156 305 474 2.12e-14 70.5
MsG0680030895.01.T01 MTR_8g071070 24.183 153 107 3 1 144 292 444 2.58e-14 70.5
MsG0680030895.01.T01 MTR_8g007650 29.655 145 95 4 1 139 291 434 2.83e-14 70.1
MsG0680030895.01.T01 MTR_8g007565 29.655 145 95 4 1 139 291 434 2.91e-14 70.1
MsG0680030895.01.T01 MTR_2g046820 33.071 127 76 2 35 152 322 448 3.01e-14 70.1
MsG0680030895.01.T01 MTR_4g082820 28.070 171 103 5 1 156 284 449 4.93e-14 69.7
MsG0680030895.01.T01 MTR_4g485640 28.488 172 101 5 5 156 483 652 5.03e-14 69.7
MsG0680030895.01.T01 MTR_5g027210 33.684 95 59 1 50 140 362 456 8.22e-14 68.9
MsG0680030895.01.T01 MTR_7g070870 29.114 158 99 5 1 152 294 444 6.36e-13 66.2
MsG0680030895.01.T01 MTR_8g466240 31.405 121 77 4 34 149 313 432 7.64e-13 66.2
MsG0680030895.01.T01 MTR_3g435310 27.451 153 102 4 1 147 248 397 2.93e-12 64.3
MsG0680030895.01.T01 MTR_6g015160 50.943 53 25 1 65 116 30 82 3.09e-12 60.1
MsG0680030895.01.T01 MTR_6g078320 26.708 161 102 4 3 149 303 461 5.22e-12 63.5
MsG0680030895.01.T01 MTR_8g068330 25.490 153 105 4 2 146 289 440 1.53e-11 62.4
MsG0680030895.01.T01 MTR_4g485590 30.973 113 76 2 4 115 272 383 1.77e-11 62.0
MsG0680030895.01.T01 MTR_8g068340 28.105 153 101 4 2 146 293 444 1.85e-11 62.0
MsG0680030895.01.T01 MTR_8g068360 26.144 153 104 4 2 146 292 443 2.22e-11 62.0
MsG0680030895.01.T01 MTR_4g123553 26.797 153 103 4 1 147 289 438 3.07e-11 61.2
MsG0680030895.01.T01 MTR_5g072850 31.200 125 76 2 2 126 233 347 4.92e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680030895.01.T01 AT1G22400 57.143 154 66 0 1 154 311 464 7.38e-61 196
MsG0680030895.01.T01 AT1G22380 55.484 155 69 0 1 155 310 464 1.05e-59 193
MsG0680030895.01.T01 AT1G22340 58.065 155 64 1 1 154 310 464 1.40e-59 193
MsG0680030895.01.T01 AT1G22360 54.902 153 69 0 1 153 307 459 3.83e-56 184
MsG0680030895.01.T01 AT1G22370 58.442 154 64 0 1 154 135 288 3.98e-54 174
MsG0680030895.01.T01 AT1G78270 51.974 152 72 1 1 151 309 460 1.20e-52 175
MsG0680030895.01.T01 AT1G22370 58.442 154 64 0 1 154 305 458 1.72e-52 174
MsG0680030895.01.T01 AT1G22360 49.673 153 65 1 1 153 307 447 5.40e-47 159
MsG0680030895.01.T01 AT5G59590 40.506 158 92 1 1 156 278 435 1.33e-37 134
MsG0680030895.01.T01 AT5G59580 38.462 156 94 1 1 154 276 431 1.82e-34 126
MsG0680030895.01.T01 AT3G11340 37.342 158 97 1 1 156 273 430 4.54e-34 125
MsG0680030895.01.T01 AT3G46660 37.975 158 96 1 1 156 284 441 2.13e-32 120
MsG0680030895.01.T01 AT3G46680 37.975 158 96 1 1 156 278 435 4.42e-32 119
MsG0680030895.01.T01 AT5G05900 37.931 145 85 1 5 149 287 426 9.07e-32 119
MsG0680030895.01.T01 AT3G46650 36.970 165 102 1 1 163 261 425 1.51e-31 118
MsG0680030895.01.T01 AT3G46720 37.821 156 92 1 1 156 276 426 1.91e-31 118
MsG0680030895.01.T01 AT3G46670 38.000 150 91 1 1 148 277 426 3.96e-31 117
MsG0680030895.01.T01 AT1G05680 38.125 160 91 2 1 156 283 438 5.78e-31 117
MsG0680030895.01.T01 AT5G05860 35.443 158 100 1 1 156 276 433 6.67e-31 116
MsG0680030895.01.T01 AT3G55700 38.926 149 87 3 5 150 283 430 6.94e-31 116
MsG0680030895.01.T01 AT5G38040 34.969 163 102 3 1 161 279 439 8.69e-31 116
MsG0680030895.01.T01 AT3G46690 39.241 158 94 1 1 156 278 435 9.34e-31 116
MsG0680030895.01.T01 AT3G46700 35.443 158 100 1 1 156 273 430 2.05e-30 115
MsG0680030895.01.T01 AT5G38010 37.333 150 91 2 1 148 283 431 3.55e-30 114
MsG0680030895.01.T01 AT5G05880 35.099 151 96 1 1 149 277 427 5.97e-30 114
MsG0680030895.01.T01 AT1G05675 35.625 160 95 2 1 156 283 438 9.08e-29 110
MsG0680030895.01.T01 AT3G55710 36.184 152 93 3 1 149 283 433 1.79e-28 110
MsG0680030895.01.T01 AT5G66690 33.529 170 93 4 1 150 276 445 3.34e-28 109
MsG0680030895.01.T01 AT2G36970 32.258 155 100 3 1 151 298 451 5.30e-28 109
MsG0680030895.01.T01 AT4G36770 33.136 169 95 3 8 158 283 451 7.78e-28 108
MsG0680030895.01.T01 AT5G26310 32.353 170 95 4 1 150 276 445 2.43e-27 107
MsG0680030895.01.T01 AT5G05890 34.437 151 97 1 1 149 281 431 1.38e-26 105
MsG0680030895.01.T01 AT2G31750 33.758 157 94 3 1 151 283 435 3.17e-26 103
MsG0680030895.01.T01 AT2G31750 33.758 157 94 3 1 151 283 435 3.79e-26 103
MsG0680030895.01.T01 AT3G50740 32.203 177 90 5 1 151 281 453 4.78e-26 103
MsG0680030895.01.T01 AT2G26480 35.032 157 92 3 1 150 272 425 7.45e-26 102
MsG0680030895.01.T01 AT4G01070 34.969 163 89 3 4 149 284 446 8.70e-26 102
MsG0680030895.01.T01 AT5G17050 36.486 148 89 2 5 151 294 437 1.70e-25 102
MsG0680030895.01.T01 AT5G17040 34.459 148 92 2 5 151 175 318 1.74e-25 100
MsG0680030895.01.T01 AT2G28080 34.667 150 94 2 1 146 301 450 2.82e-25 101
MsG0680030895.01.T01 AT2G31790 35.802 162 94 3 1 156 285 442 3.78e-25 100
MsG0680030895.01.T01 AT4G15480 33.333 165 101 2 1 156 300 464 4.19e-25 101
MsG0680030895.01.T01 AT5G05870 32.911 158 104 1 1 156 283 440 4.32e-25 100
MsG0680030895.01.T01 AT2G16890 33.544 158 93 3 1 150 293 446 6.88e-25 100
MsG0680030895.01.T01 AT5G17040 33.784 148 93 2 5 151 277 420 7.12e-25 100
MsG0680030895.01.T01 AT3G21560 32.099 162 102 2 1 156 299 458 1.25e-24 99.8
MsG0680030895.01.T01 AT5G14860 34.337 166 94 4 1 156 300 460 1.61e-24 99.4
MsG0680030895.01.T01 AT4G15500 32.716 162 101 2 1 156 289 448 4.55e-24 98.2
MsG0680030895.01.T01 AT4G15490 32.692 156 97 2 1 150 293 446 6.36e-24 97.8
MsG0680030895.01.T01 AT5G17030 32.432 148 95 2 5 151 293 436 8.24e-24 97.4
MsG0680030895.01.T01 AT1G05560 32.143 168 101 3 1 156 271 437 9.76e-24 97.1
MsG0680030895.01.T01 AT1G05560 32.143 168 101 3 1 156 321 487 1.19e-23 97.1
MsG0680030895.01.T01 AT1G01420 32.530 166 90 5 1 147 281 443 2.25e-23 96.3
MsG0680030895.01.T01 AT1G01420 32.530 166 90 5 1 147 284 446 2.39e-23 96.3
MsG0680030895.01.T01 AT2G18560 31.667 180 96 7 1 161 190 361 3.21e-23 95.1
MsG0680030895.01.T01 AT1G05530 32.738 168 100 3 1 156 274 440 3.47e-23 95.5
MsG0680030895.01.T01 AT2G23260 36.620 142 82 3 13 149 294 432 3.52e-23 95.5
MsG0680030895.01.T01 AT4G14090 36.364 154 67 5 13 149 295 434 4.43e-23 95.1
MsG0680030895.01.T01 AT1G30530 32.000 150 97 2 4 152 287 432 1.10e-22 94.4
MsG0680030895.01.T01 AT3G16520 35.220 159 90 6 2 150 284 439 2.45e-22 93.2
MsG0680030895.01.T01 AT1G10400 32.716 162 96 3 1 156 293 447 2.45e-22 93.2
MsG0680030895.01.T01 AT3G16520 35.220 159 90 6 2 150 284 439 2.58e-22 93.2
MsG0680030895.01.T01 AT3G16520 35.220 159 90 6 2 150 284 439 2.75e-22 93.2
MsG0680030895.01.T01 AT2G43840 35.135 148 84 4 1 142 277 418 6.58e-22 92.0
MsG0680030895.01.T01 AT4G15550 32.955 176 102 4 1 161 291 465 6.72e-22 92.0
MsG0680030895.01.T01 AT2G43840 35.135 148 84 4 1 142 277 418 6.77e-22 92.0
MsG0680030895.01.T01 AT2G43820 37.984 129 70 3 20 142 294 418 1.80e-21 90.9
MsG0680030895.01.T01 AT2G23250 35.915 142 83 3 13 149 276 414 1.91e-21 90.5
MsG0680030895.01.T01 AT2G15480 30.723 166 105 3 1 156 301 466 2.25e-21 90.5
MsG0680030895.01.T01 AT2G36790 34.568 162 82 5 16 156 315 473 2.79e-21 90.5
MsG0680030895.01.T01 AT3G53160 34.682 173 89 5 5 156 299 468 3.35e-21 90.1
MsG0680030895.01.T01 AT2G36800 32.948 173 92 5 5 156 304 473 6.58e-21 89.4
MsG0680030895.01.T01 AT2G36760 30.460 174 95 5 5 156 305 474 8.01e-21 89.0
MsG0680030895.01.T01 AT2G18570 30.769 169 96 6 1 150 280 446 1.14e-20 88.6
MsG0680030895.01.T01 AT1G24100 35.333 150 88 2 5 149 292 437 1.33e-20 88.2
MsG0680030895.01.T01 AT2G15480 29.940 167 100 4 1 150 301 467 1.99e-20 87.8
MsG0680030895.01.T01 AT3G02100 34.437 151 82 3 1 147 299 436 4.44e-20 87.0
MsG0680030895.01.T01 AT3G21750 32.164 171 90 3 2 148 278 446 4.51e-20 87.0
MsG0680030895.01.T01 AT2G30140 36.029 136 71 4 20 147 301 428 5.00e-20 86.7
MsG0680030895.01.T01 AT2G30140 36.029 136 71 4 20 147 300 427 5.19e-20 86.7
MsG0680030895.01.T01 AT2G15490 29.518 166 107 3 1 156 298 463 7.78e-20 86.3
MsG0680030895.01.T01 AT2G15490 28.994 169 107 3 1 156 298 466 1.79e-19 85.1
MsG0680030895.01.T01 AT1G01390 35.032 157 85 4 8 147 305 461 2.98e-19 84.7
MsG0680030895.01.T01 AT1G01390 35.032 157 85 4 8 147 288 444 3.09e-19 84.7
MsG0680030895.01.T01 AT4G15280 33.553 152 86 3 9 148 303 451 4.81e-19 84.0
MsG0680030895.01.T01 AT4G15280 33.553 152 86 3 9 148 335 483 5.91e-19 84.0
MsG0680030895.01.T01 AT2G36780 30.114 176 93 5 5 156 305 474 1.09e-18 83.2
MsG0680030895.01.T01 AT4G34131 27.545 167 111 2 4 160 304 470 1.63e-18 82.4
MsG0680030895.01.T01 AT2G36770 29.480 173 98 5 5 156 305 474 1.92e-18 82.4
MsG0680030895.01.T01 AT2G30150 35.294 136 72 4 20 147 286 413 2.96e-18 81.6
MsG0680030895.01.T01 AT2G30150 35.294 136 72 4 20 147 302 429 3.50e-18 81.6
MsG0680030895.01.T01 AT3G21790 31.928 166 90 2 4 146 291 456 3.74e-18 81.6
MsG0680030895.01.T01 AT2G36750 30.814 172 92 5 5 152 300 468 4.06e-18 81.3
MsG0680030895.01.T01 AT1G07250 33.571 140 81 3 20 147 314 453 6.29e-18 80.9
MsG0680030895.01.T01 AT2G29740 34.677 124 71 2 20 133 316 439 7.64e-18 80.5
MsG0680030895.01.T01 AT4G34138 30.435 161 93 4 4 149 304 460 8.11e-18 80.5
MsG0680030895.01.T01 AT4G15260 33.113 151 87 2 9 146 183 332 9.43e-18 79.7
MsG0680030895.01.T01 AT1G07260 33.582 134 79 2 20 143 313 446 9.49e-18 80.1
MsG0680030895.01.T01 AT2G29710 28.966 145 93 3 20 156 306 448 1.38e-17 79.7
MsG0680030895.01.T01 AT3G22250 35.338 133 74 4 18 143 314 441 1.72e-17 79.3
MsG0680030895.01.T01 AT5G65550 34.965 143 84 4 19 155 308 447 2.04e-17 79.3
MsG0680030895.01.T01 AT2G16890 30.147 136 83 3 1 128 293 424 2.06e-17 79.3
MsG0680030895.01.T01 AT5G03490 28.387 155 98 4 1 150 295 441 4.17e-17 78.6
MsG0680030895.01.T01 AT3G53150 34.746 118 73 2 4 117 314 431 5.58e-17 78.2
MsG0680030895.01.T01 AT2G29730 28.276 145 93 3 20 156 307 448 6.28e-17 77.8
MsG0680030895.01.T01 AT3G21760 34.921 126 80 2 9 134 310 433 6.63e-17 77.8
MsG0680030895.01.T01 AT3G21800 33.858 127 69 2 35 148 329 453 7.40e-17 77.8
MsG0680030895.01.T01 AT3G21780 29.940 167 95 2 2 146 280 446 9.67e-16 74.3
MsG0680030895.01.T01 AT1G07240 29.167 144 95 3 20 157 313 455 6.25e-15 72.0
MsG0680030895.01.T01 AT1G51210 26.667 150 97 4 1 145 291 432 6.69e-15 72.0
MsG0680030895.01.T01 AT1G73880 32.174 115 71 3 40 149 333 445 7.10e-15 72.0
MsG0680030895.01.T01 AT2G29750 30.081 123 76 2 20 132 316 438 1.05e-14 71.6
MsG0680030895.01.T01 AT4G34135 27.857 140 89 3 4 132 305 443 5.32e-14 69.3
MsG0680030895.01.T01 AT5G12890 31.250 160 88 6 6 147 301 456 1.56e-13 68.2
MsG0680030895.01.T01 AT5G37950 35.955 89 56 1 1 88 255 343 8.02e-13 65.9
MsG0680030895.01.T01 AT5G37950 35.955 89 56 1 1 88 249 337 8.25e-13 65.9
MsG0680030895.01.T01 AT4G09500 28.662 157 100 5 1 147 239 393 1.16e-11 62.8
MsG0680030895.01.T01 AT4G09500 28.662 157 100 5 1 147 264 418 1.18e-11 62.8
MsG0680030895.01.T01 AT2G22590 31.373 153 96 4 2 146 295 446 1.47e-11 62.4
MsG0680030895.01.T01 AT5G49690 26.316 152 99 4 1 146 287 431 1.91e-11 62.0
MsG0680030895.01.T01 AT1G64910 26.667 165 109 5 1 155 264 426 3.98e-11 61.2

Find 44 sgRNAs with CRISPR-Local

Find 57 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGTCCCTTTCCTGGGCTTA+TGG 0.154587 6:+11267394 MsG0680030895.01.T01:CDS
CCATCCCAATCTCCCATTCT+TGG 0.209670 6:-11267196 None:intergenic
TGTCCCTTTCCTGGGCTTAT+GGG 0.254832 6:+11267395 MsG0680030895.01.T01:CDS
TGGCAAATAATTCTACAGTT+AGG 0.366108 6:-11267176 None:intergenic
CCAAACATAACACAAAATAA+AGG 0.370006 6:-11267368 None:intergenic
ATTTGCCAAGAATGGGAGAT+TGG 0.371750 6:+11267191 MsG0680030895.01.T01:CDS
ATTAGGCCTGATCTTATCAT+TGG 0.383550 6:+11266954 MsG0680030895.01.T01:CDS
GTAGAATTATTTGCCAAGAA+TGG 0.396640 6:+11267183 MsG0680030895.01.T01:CDS
GTGAATGAAACTTCTGATAG+AGG 0.407616 6:+11267005 MsG0680030895.01.T01:CDS
TTAGGCCTGATCTTATCATT+GGG 0.413312 6:+11266955 MsG0680030895.01.T01:CDS
TAGAATTATTTGCCAAGAAT+GGG 0.414944 6:+11267184 MsG0680030895.01.T01:CDS
CAAACATAACACAAAATAAA+GGG 0.444240 6:-11267367 None:intergenic
TTTGCCAAGAATGGGAGATT+GGG 0.446650 6:+11267192 MsG0680030895.01.T01:CDS
TGCCTTCTTCTTCAACTGCA+TGG 0.455339 6:-11267309 None:intergenic
ATAAAGGGTGGTTCCACACT+TGG 0.476307 6:-11267352 None:intergenic
CTGATCAATGAATTGATGTC+GGG 0.483366 6:+11267257 MsG0680030895.01.T01:CDS
GAATTGATGTCGGGAGAGAA+AGG 0.483982 6:+11267266 MsG0680030895.01.T01:CDS
GTGTTGAACTACCCTTCAAT+TGG 0.501274 6:+11267059 MsG0680030895.01.T01:CDS
GTCAAGAATCGACCAATTGA+AGG 0.512813 6:-11267071 None:intergenic
ACCACTGAAAGTCTTCGTGC+TGG 0.540670 6:+11267113 MsG0680030895.01.T01:CDS
TGTCCCATAAGCCCAGGAAA+GGG 0.545808 6:-11267398 None:intergenic
GATTCTTGACTCATTGTGGA+TGG 0.549558 6:+11267084 MsG0680030895.01.T01:CDS
TGCCATGCAGTTGAAGAAGA+AGG 0.552603 6:+11267307 MsG0680030895.01.T01:CDS
TAATACTAATGTAAAGAGAG+AGG 0.556819 6:+11267223 MsG0680030895.01.T01:CDS
TTGTCCCATAAGCCCAGGAA+AGG 0.558814 6:-11267399 None:intergenic
TAGTTCAACACTTTCTCTAG+TGG 0.559164 6:-11267047 None:intergenic
ACTGATCAATGAATTGATGT+CGG 0.560665 6:+11267256 MsG0680030895.01.T01:CDS
TATATTTGTCCCATAAGCCC+AGG 0.565143 6:-11267404 None:intergenic
CCAAGAATGGGAGATTGGGA+TGG 0.569670 6:+11267196 MsG0680030895.01.T01:CDS
GCAGTTGAAGAAGAAGGCAG+AGG 0.587599 6:+11267313 MsG0680030895.01.T01:CDS
ACACAAGACTTGGCCAAGTG+TGG 0.592324 6:+11267339 MsG0680030895.01.T01:CDS
CTGGAGTGCCAATGTTGTGT+TGG 0.595250 6:+11267132 MsG0680030895.01.T01:CDS
GGTCGATTCTTGACTCATTG+TGG 0.596727 6:+11267080 MsG0680030895.01.T01:CDS
CAAATAATTCTACAGTTAGG+TGG 0.601515 6:-11267173 None:intergenic
TCCAGCACGAAGACTTTCAG+TGG 0.613070 6:-11267114 None:intergenic
TCAAGAATCGACCAATTGAA+GGG 0.617191 6:-11267070 None:intergenic
TAGGCCTGATCTTATCATTG+GGG 0.618186 6:+11266956 MsG0680030895.01.T01:CDS
GCAGAGGAAGACACAAGACT+TGG 0.619956 6:+11267329 MsG0680030895.01.T01:CDS
ATAGAGGACAAATAGCAAGC+TGG 0.620216 6:+11267021 MsG0680030895.01.T01:CDS
AGCACGAAGACTTTCAGTGG+TGG 0.620924 6:-11267111 None:intergenic
TACTAATGTAAAGAGAGAGG+AGG 0.625411 6:+11267226 MsG0680030895.01.T01:CDS
GAGAGAAAGGAAAGAAGATG+AGG 0.635833 6:+11267279 MsG0680030895.01.T01:CDS
AGGCCTGATCTTATCATTGG+GGG 0.641034 6:+11266957 MsG0680030895.01.T01:CDS
ACATAACACAAAATAAAGGG+TGG 0.670193 6:-11267364 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CAAACATAACACAAAATAAA+GGG - Chr6:11267370-11267389 None:intergenic 20.0%
! CCAAACATAACACAAAATAA+AGG - Chr6:11267371-11267390 None:intergenic 25.0%
! TAATACTAATGTAAAGAGAG+AGG + Chr6:11267223-11267242 MsG0680030895.01.T01:CDS 25.0%
! TAGAATTATTTGCCAAGAAT+GGG + Chr6:11267184-11267203 MsG0680030895.01.T01:CDS 25.0%
!!! AACCATTTTTGTGGATAATT+AGG + Chr6:11266937-11266956 MsG0680030895.01.T01:CDS 25.0%
!!! CCTTTATTTTGTGTTATGTT+TGG + Chr6:11267368-11267387 MsG0680030895.01.T01:CDS 25.0%
ACATAACACAAAATAAAGGG+TGG - Chr6:11267367-11267386 None:intergenic 30.0%
ACTGATCAATGAATTGATGT+CGG + Chr6:11267256-11267275 MsG0680030895.01.T01:CDS 30.0%
CAAAAATGGTTTCATGTTGT+TGG - Chr6:11266928-11266947 None:intergenic 30.0%
CAAATAATTCTACAGTTAGG+TGG - Chr6:11267176-11267195 None:intergenic 30.0%
GTAGAATTATTTGCCAAGAA+TGG + Chr6:11267183-11267202 MsG0680030895.01.T01:CDS 30.0%
TGGCAAATAATTCTACAGTT+AGG - Chr6:11267179-11267198 None:intergenic 30.0%
! ATAAGCTCTTAGAGTTTTCT+TGG + Chr6:11266895-11266914 MsG0680030895.01.T01:CDS 30.0%
! TAAGCTCTTAGAGTTTTCTT+GGG + Chr6:11266896-11266915 MsG0680030895.01.T01:CDS 30.0%
!! ACAACATGAAACCATTTTTG+TGG + Chr6:11266928-11266947 MsG0680030895.01.T01:CDS 30.0%
AAAAATGGCCAACACAACAT+TGG - Chr6:11267143-11267162 None:intergenic 35.0%
ATTAGGCCTGATCTTATCAT+TGG + Chr6:11266954-11266973 MsG0680030895.01.T01:CDS 35.0%
CTGATCAATGAATTGATGTC+GGG + Chr6:11267257-11267276 MsG0680030895.01.T01:CDS 35.0%
GGCCTAATTATCCACAAAAA+TGG - Chr6:11266942-11266961 None:intergenic 35.0%
GTGAATGAAACTTCTGATAG+AGG + Chr6:11267005-11267024 MsG0680030895.01.T01:CDS 35.0%
TACTAATGTAAAGAGAGAGG+AGG + Chr6:11267226-11267245 MsG0680030895.01.T01:CDS 35.0%
TAGTTCAACACTTTCTCTAG+TGG - Chr6:11267050-11267069 None:intergenic 35.0%
TCAAGAATCGACCAATTGAA+GGG - Chr6:11267073-11267092 None:intergenic 35.0%
TTAGGCCTGATCTTATCATT+GGG + Chr6:11266955-11266974 MsG0680030895.01.T01:CDS 35.0%
! CTTAGAGTTTTCTTGGGATT+TGG + Chr6:11266902-11266921 MsG0680030895.01.T01:CDS 35.0%
ATAGAGGACAAATAGCAAGC+TGG + Chr6:11267021-11267040 MsG0680030895.01.T01:CDS 40.0%
ATTTGCCAAGAATGGGAGAT+TGG + Chr6:11267191-11267210 MsG0680030895.01.T01:CDS 40.0%
GAGAGAAAGGAAAGAAGATG+AGG + Chr6:11267279-11267298 MsG0680030895.01.T01:CDS 40.0%
GATTCTTGACTCATTGTGGA+TGG + Chr6:11267084-11267103 MsG0680030895.01.T01:CDS 40.0%
GTCAAGAATCGACCAATTGA+AGG - Chr6:11267074-11267093 None:intergenic 40.0%
GTGTTGAACTACCCTTCAAT+TGG + Chr6:11267059-11267078 MsG0680030895.01.T01:CDS 40.0%
TAGGCCTGATCTTATCATTG+GGG + Chr6:11266956-11266975 MsG0680030895.01.T01:CDS 40.0%
TATATTTGTCCCATAAGCCC+AGG - Chr6:11267407-11267426 None:intergenic 40.0%
TTTGCCAAGAATGGGAGATT+GGG + Chr6:11267192-11267211 MsG0680030895.01.T01:CDS 40.0%
! TTGGATTTTGTCCCTTTCCT+GGG + Chr6:11267387-11267406 MsG0680030895.01.T01:CDS 40.0%
! TTTGGATTTTGTCCCTTTCC+TGG + Chr6:11267386-11267405 MsG0680030895.01.T01:CDS 40.0%
AGGCCTGATCTTATCATTGG+GGG + Chr6:11266957-11266976 MsG0680030895.01.T01:CDS 45.0%
ATAAAGGGTGGTTCCACACT+TGG - Chr6:11267355-11267374 None:intergenic 45.0%
GAATTGATGTCGGGAGAGAA+AGG + Chr6:11267266-11267285 MsG0680030895.01.T01:CDS 45.0%
GGTGGCTGATCAGCAAAAAA+TGG - Chr6:11267158-11267177 None:intergenic 45.0%
TGCCATGCAGTTGAAGAAGA+AGG + Chr6:11267307-11267326 MsG0680030895.01.T01:CDS 45.0%
TGCCTTCTTCTTCAACTGCA+TGG - Chr6:11267312-11267331 None:intergenic 45.0%
! GGTCGATTCTTGACTCATTG+TGG + Chr6:11267080-11267099 MsG0680030895.01.T01:CDS 45.0%
ACACAAGACTTGGCCAAGTG+TGG + Chr6:11267339-11267358 MsG0680030895.01.T01:CDS 50.0%
ACCACTGAAAGTCTTCGTGC+TGG + Chr6:11267113-11267132 MsG0680030895.01.T01:CDS 50.0%
AGCACGAAGACTTTCAGTGG+TGG - Chr6:11267114-11267133 None:intergenic 50.0%
CCAAGAATGGGAGATTGGGA+TGG + Chr6:11267196-11267215 MsG0680030895.01.T01:CDS 50.0%
CCATCCCAATCTCCCATTCT+TGG - Chr6:11267199-11267218 None:intergenic 50.0%
GAGCCCCCAATGATAAGATC+AGG - Chr6:11266963-11266982 None:intergenic 50.0%
GCAGAGGAAGACACAAGACT+TGG + Chr6:11267329-11267348 MsG0680030895.01.T01:CDS 50.0%
GCAGTTGAAGAAGAAGGCAG+AGG + Chr6:11267313-11267332 MsG0680030895.01.T01:CDS 50.0%
TCCAGCACGAAGACTTTCAG+TGG - Chr6:11267117-11267136 None:intergenic 50.0%
TGTCCCATAAGCCCAGGAAA+GGG - Chr6:11267401-11267420 None:intergenic 50.0%
TGTCCCTTTCCTGGGCTTAT+GGG + Chr6:11267395-11267414 MsG0680030895.01.T01:CDS 50.0%
TTGTCCCATAAGCCCAGGAA+AGG - Chr6:11267402-11267421 None:intergenic 50.0%
TTGTCCCTTTCCTGGGCTTA+TGG + Chr6:11267394-11267413 MsG0680030895.01.T01:CDS 50.0%
! CTGGAGTGCCAATGTTGTGT+TGG + Chr6:11267132-11267151 MsG0680030895.01.T01:CDS 50.0%
Chromosome Type Strat End Strand Name
Chr6 gene 11266885 11267427 11266885 ID=MsG0680030895.01;Name=MsG0680030895.01
Chr6 mRNA 11266885 11267427 11266885 ID=MsG0680030895.01.T01;Parent=MsG0680030895.01;Name=MsG0680030895.01.T01;_AED=0.49;_eAED=0.49;_QI=0|-1|0|1|-1|1|1|0|180
Chr6 exon 11266885 11267427 11266885 ID=MsG0680030895.01.T01:exon:8419;Parent=MsG0680030895.01.T01
Chr6 CDS 11266885 11267427 11266885 ID=MsG0680030895.01.T01:cds;Parent=MsG0680030895.01.T01
Gene Sequence

>MsG0680030895.01.T01

ATGTCTCGAGATAAGCTCTTAGAGTTTTCTTGGGATTTGGCCAACAACATGAAACCATTTTTGTGGATAATTAGGCCTGATCTTATCATTGGGGGCTCAGTTGTTTTGTCAACTGATTTTGTGAATGAAACTTCTGATAGAGGACAAATAGCAAGCTGGTGTCCACTAGAGAAAGTGTTGAACTACCCTTCAATTGGTCGATTCTTGACTCATTGTGGATGGAAATCCACCACTGAAAGTCTTCGTGCTGGAGTGCCAATGTTGTGTTGGCCATTTTTTGCTGATCAGCCACCTAACTGTAGAATTATTTGCCAAGAATGGGAGATTGGGATGGAAATTAATACTAATGTAAAGAGAGAGGAGGTAGAGAAACTGATCAATGAATTGATGTCGGGAGAGAAAGGAAAGAAGATGAGGCAAAATGCCATGCAGTTGAAGAAGAAGGCAGAGGAAGACACAAGACTTGGCCAAGTGTGGAACCACCCTTTATTTTGTGTTATGTTTGGATTTTGTCCCTTTCCTGGGCTTATGGGACAAATATAA

Protein sequence

>MsG0680030895.01.T01

MSRDKLLEFSWDLANNMKPFLWIIRPDLIIGGSVVLSTDFVNETSDRGQIASWCPLEKVLNYPSIGRFLTHCGWKSTTESLRAGVPMLCWPFFADQPPNCRIICQEWEIGMEINTNVKREEVEKLINELMSGEKGKKMRQNAMQLKKKAEEDTRLGQVWNHPLFCVMFGFCPFPGLMGQI*