AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880047135.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880047135.01.T01 MTR_4g121460 94.690 339 9 3 1 330 1 339 0.0 651
MsG0880047135.01.T01 MTR_2g034790 50.862 348 112 13 1 318 1 319 1.53e-95 286
MsG0880047135.01.T01 MTR_7g109320 55.556 207 79 3 1 194 1 207 1.34e-65 211
MsG0880047135.01.T01 MTR_7g117730 71.552 116 33 0 1 116 1 116 3.65e-63 201
MsG0880047135.01.T01 MTR_8g027345 72.414 116 32 0 1 116 1 116 4.61e-62 200
MsG0880047135.01.T01 MTR_1g076150 73.276 116 31 0 1 116 1 116 2.09e-60 194
MsG0880047135.01.T01 MTR_4g073420 62.069 145 49 1 1 145 1 139 5.29e-60 194
MsG0880047135.01.T01 MTR_4g478180 71.552 116 33 0 1 116 2 117 6.34e-60 196
MsG0880047135.01.T01 MTR_4g125520 71.552 116 33 0 1 116 1 116 6.68e-60 194
MsG0880047135.01.T01 MTR_1g043050 70.690 116 34 0 1 116 1 116 1.17e-59 192
MsG0880047135.01.T01 MTR_3g097450 61.905 147 50 1 1 141 1 147 4.13e-59 192
MsG0880047135.01.T01 MTR_1g100653 69.828 116 35 0 1 116 1 116 6.61e-59 191
MsG0880047135.01.T01 MTR_7g076740 69.231 117 35 1 1 116 1 117 9.40e-59 191
MsG0880047135.01.T01 MTR_1g043080 70.690 116 34 0 1 116 1 116 1.54e-58 189
MsG0880047135.01.T01 MTR_7g011170 70.690 116 34 0 1 116 1 116 2.37e-58 191
MsG0880047135.01.T01 MTR_3g083540 69.643 112 34 0 5 116 34 145 1.34e-57 188
MsG0880047135.01.T01 MTR_2g011660 70.085 117 34 1 1 116 1 117 1.51e-57 189
MsG0880047135.01.T01 MTR_8g031360 66.116 121 39 2 1 119 1 121 3.07e-57 187
MsG0880047135.01.T01 MTR_6g012690 68.966 116 36 0 1 116 1 116 4.91e-57 189
MsG0880047135.01.T01 MTR_4g082290 69.828 116 35 0 1 116 1 116 5.30e-57 190
MsG0880047135.01.T01 MTR_3g074520 67.241 116 38 0 1 116 1 116 8.03e-57 187
MsG0880047135.01.T01 MTR_4g091490 70.085 117 34 1 1 116 1 117 1.01e-56 188
MsG0880047135.01.T01 MTR_7g096930 67.241 116 38 0 1 116 1 116 1.13e-56 185
MsG0880047135.01.T01 MTR_2g089620 68.966 116 36 0 1 116 1 116 1.50e-56 186
MsG0880047135.01.T01 MTR_7g087130 63.281 128 47 0 1 128 1 128 1.67e-56 187
MsG0880047135.01.T01 MTR_0140s0030 68.103 116 37 0 1 116 2 117 1.96e-56 186
MsG0880047135.01.T01 MTR_0489s0020 68.103 116 37 0 1 116 2 117 1.96e-56 186
MsG0880047135.01.T01 MTR_7g115650 64.655 116 41 0 1 116 1 116 2.32e-56 182
MsG0880047135.01.T01 MTR_8g095390 68.376 117 37 0 1 117 1 117 4.18e-55 182
MsG0880047135.01.T01 MTR_5g029840 67.241 116 38 0 1 116 1 116 1.04e-54 182
MsG0880047135.01.T01 MTR_3g039990 66.379 116 39 0 1 116 2 117 2.99e-54 180
MsG0880047135.01.T01 MTR_4g082230 67.241 116 38 0 1 116 1 116 3.10e-54 182
MsG0880047135.01.T01 MTR_5g079670 67.544 114 37 0 3 116 2 115 5.92e-54 176
MsG0880047135.01.T01 MTR_3g065440 66.379 116 39 0 1 116 1 116 1.57e-53 178
MsG0880047135.01.T01 MTR_5g078140 65.517 116 40 0 1 116 1 116 2.45e-53 178
MsG0880047135.01.T01 MTR_7g010210 64.655 116 41 0 1 116 1 116 5.78e-53 177
MsG0880047135.01.T01 MTR_5g007370 65.517 116 40 0 1 116 1 116 5.83e-53 176
MsG0880047135.01.T01 MTR_7g010210 64.655 116 41 0 1 116 1 116 9.36e-53 175
MsG0880047135.01.T01 MTR_4g102380 64.103 117 42 0 1 117 1 117 3.00e-51 171
MsG0880047135.01.T01 MTR_6g012180 65.766 111 38 0 1 111 1 111 8.23e-51 171
MsG0880047135.01.T01 MTR_3g461490 62.931 116 43 0 1 116 1 116 9.98e-51 171
MsG0880047135.01.T01 MTR_4g485530 64.348 115 40 1 3 116 2 116 1.69e-49 164
MsG0880047135.01.T01 MTR_1g085040 65.517 116 40 0 1 116 1 116 1.78e-49 169
MsG0880047135.01.T01 MTR_2g099740 55.224 134 54 1 1 134 1 128 3.19e-49 169
MsG0880047135.01.T01 MTR_0063s0090 65.487 113 39 0 1 113 1 113 7.86e-49 163
MsG0880047135.01.T01 MTR_8g098860 61.207 116 45 0 1 116 1 116 1.74e-48 165
MsG0880047135.01.T01 MTR_0251s0050 59.829 117 46 1 1 116 1 117 4.18e-48 163
MsG0880047135.01.T01 MTR_3g103570 61.017 118 45 1 1 117 1 118 4.44e-48 165
MsG0880047135.01.T01 MTR_1g085640 63.793 116 42 0 1 116 1 116 8.45e-48 165
MsG0880047135.01.T01 MTR_4g105130 62.931 116 43 0 1 116 1 116 9.46e-48 164
MsG0880047135.01.T01 MTR_6g009430 58.621 116 48 0 1 116 1 116 9.91e-48 164
MsG0880047135.01.T01 MTR_7g110830 62.931 116 43 0 1 116 1 116 1.04e-47 164
MsG0880047135.01.T01 MTR_2g067420 64.545 110 39 0 2 111 4 113 1.13e-47 163
MsG0880047135.01.T01 MTR_8g017540 61.017 118 46 0 1 118 47 164 1.74e-47 164
MsG0880047135.01.T01 MTR_2g089450 60.345 116 46 0 1 116 1 116 4.11e-47 159
MsG0880047135.01.T01 MTR_0008s0470 58.621 116 47 1 1 115 1 116 4.18e-47 161
MsG0880047135.01.T01 MTR_8g017440 60.345 116 46 0 1 116 1 116 5.66e-47 162
MsG0880047135.01.T01 MTR_0008s0390 59.483 116 46 1 1 115 1 116 6.92e-47 160
MsG0880047135.01.T01 MTR_1g017000 55.645 124 54 1 1 123 1 124 8.71e-47 159
MsG0880047135.01.T01 MTR_5g010020 62.727 110 41 0 1 110 1 110 9.87e-47 161
MsG0880047135.01.T01 MTR_4g057635 58.974 117 47 1 1 116 1 117 1.09e-46 160
MsG0880047135.01.T01 MTR_7g111290 66.972 109 36 0 1 109 1 109 2.81e-46 161
MsG0880047135.01.T01 MTR_2g064160 61.261 111 43 0 6 116 5 115 4.39e-46 159
MsG0880047135.01.T01 MTR_3g077110 62.069 116 44 0 1 116 1 116 6.12e-46 159
MsG0880047135.01.T01 MTR_7g035075 66.667 105 35 0 12 116 14 118 1.20e-45 154
MsG0880047135.01.T01 MTR_2g089420 60.656 122 47 1 1 122 1 121 1.90e-45 160
MsG0880047135.01.T01 MTR_6g006030 61.017 118 44 1 1 116 1 118 2.59e-45 154
MsG0880047135.01.T01 MTR_7g102110 54.839 124 55 1 1 123 1 124 2.62e-45 155
MsG0880047135.01.T01 MTR_6g090405 59.483 116 46 1 1 115 1 116 2.88e-45 155
MsG0880047135.01.T01 MTR_0008s0280 59.322 118 48 0 1 118 1 118 3.08e-45 154
MsG0880047135.01.T01 MTR_2g095520 61.261 111 42 1 1 110 1 111 3.91e-45 156
MsG0880047135.01.T01 MTR_1g045610 66.990 103 34 0 13 115 22 124 4.40e-45 154
MsG0880047135.01.T01 MTR_8g017500 58.974 117 48 0 1 117 1 117 4.45e-45 157
MsG0880047135.01.T01 MTR_1g017140 57.265 117 49 1 1 116 1 117 5.25e-45 157
MsG0880047135.01.T01 MTR_1g112760 61.404 114 44 0 3 116 4 117 9.69e-45 153
MsG0880047135.01.T01 MTR_5g014990 56.410 117 50 1 1 116 1 117 1.20e-44 155
MsG0880047135.01.T01 MTR_4g100720 62.617 107 40 0 9 115 10 116 3.52e-44 149
MsG0880047135.01.T01 MTR_8g017390 42.157 204 111 5 1 199 1 202 3.56e-44 157
MsG0880047135.01.T01 MTR_0197s0010 50.714 140 64 1 17 151 6 145 4.98e-44 151
MsG0880047135.01.T01 MTR_1g110460 62.500 104 39 0 12 115 26 129 1.53e-43 152
MsG0880047135.01.T01 MTR_1g100667 46.821 173 89 2 1 172 1 171 1.77e-43 151
MsG0880047135.01.T01 MTR_4g065017 61.905 105 40 0 12 116 17 121 2.45e-43 152
MsG0880047135.01.T01 MTR_2g097910 57.627 118 46 1 12 129 20 133 2.93e-43 152
MsG0880047135.01.T01 MTR_1g073170 65.049 103 36 0 13 115 21 123 3.55e-43 149
MsG0880047135.01.T01 MTR_3g028740 61.111 108 42 0 9 116 19 126 3.70e-43 152
MsG0880047135.01.T01 MTR_4g097570 60.000 110 43 1 1 109 1 110 4.84e-43 150
MsG0880047135.01.T01 MTR_1g086510 64.423 104 37 0 9 112 18 121 5.56e-42 147
MsG0880047135.01.T01 MTR_8g020490 61.165 103 40 0 14 116 10 112 6.36e-42 146
MsG0880047135.01.T01 MTR_4g128670 58.559 111 45 1 1 110 1 111 6.68e-42 149
MsG0880047135.01.T01 MTR_8g017340 51.908 131 60 2 1 130 1 129 1.15e-41 151
MsG0880047135.01.T01 MTR_4g097570 59.459 111 43 2 1 109 1 111 1.91e-41 146
MsG0880047135.01.T01 MTR_8g017350 51.908 131 60 2 1 130 1 129 1.94e-41 152
MsG0880047135.01.T01 MTR_3g011610 49.275 138 62 1 10 147 35 164 2.02e-41 151
MsG0880047135.01.T01 MTR_8g042410 58.491 106 44 0 10 115 35 140 5.43e-41 150
MsG0880047135.01.T01 MTR_5g079120 53.719 121 56 0 9 129 58 178 6.98e-41 145
MsG0880047135.01.T01 MTR_5g042030 57.944 107 45 0 10 116 5 111 2.81e-40 143
MsG0880047135.01.T01 MTR_3g052450 58.333 108 45 0 8 115 36 143 3.22e-40 148
MsG0880047135.01.T01 MTR_3g052430 59.615 104 42 0 12 115 41 144 8.86e-40 147
MsG0880047135.01.T01 MTR_6g055910 57.143 112 48 0 4 115 6 117 2.00e-39 140
MsG0880047135.01.T01 MTR_5g079290 55.660 106 47 0 11 116 16 121 7.84e-39 138
MsG0880047135.01.T01 MTR_5g079220 53.636 110 51 0 7 116 16 125 8.75e-39 139
MsG0880047135.01.T01 MTR_1g086530 48.252 143 65 2 8 141 29 171 9.69e-39 139
MsG0880047135.01.T01 MTR_7g017260 56.881 109 45 1 10 116 23 131 1.00e-38 139
MsG0880047135.01.T01 MTR_5g078800 56.604 106 46 0 11 116 6 111 2.22e-38 137
MsG0880047135.01.T01 MTR_2g088170 58.879 107 44 0 9 115 26 132 4.54e-38 141
MsG0880047135.01.T01 MTR_0247s0040 57.282 103 44 0 11 113 6 108 6.00e-38 134
MsG0880047135.01.T01 MTR_5g078910 54.717 106 48 0 11 116 6 111 2.95e-37 135
MsG0880047135.01.T01 MTR_0001s0360 54.717 106 48 0 11 116 6 111 4.41e-37 134
MsG0880047135.01.T01 MTR_1g021230 56.731 104 45 0 12 115 57 160 5.57e-37 138
MsG0880047135.01.T01 MTR_5g078930 49.219 128 64 1 6 132 2 129 2.42e-36 130
MsG0880047135.01.T01 MTR_4g063100 56.311 103 45 0 13 115 8 110 2.91e-36 131
MsG0880047135.01.T01 MTR_0193s0090 45.113 133 73 0 11 143 6 138 3.16e-36 130
MsG0880047135.01.T01 MTR_2g033170 57.944 107 45 0 8 114 20 126 7.62e-36 132
MsG0880047135.01.T01 MTR_1g062940 39.791 191 103 3 12 190 6 196 8.64e-36 129
MsG0880047135.01.T01 MTR_1g083630 48.387 124 64 0 8 131 8 131 1.11e-35 136
MsG0880047135.01.T01 MTR_8g060940 53.922 102 47 0 11 112 6 107 3.70e-35 128
MsG0880047135.01.T01 MTR_5g078860 52.830 106 50 0 11 116 6 111 3.96e-35 130
MsG0880047135.01.T01 MTR_5g078950 53.398 103 48 0 11 113 6 108 5.20e-35 128
MsG0880047135.01.T01 MTR_4g123040 57.009 107 46 0 8 114 20 126 3.10e-34 127
MsG0880047135.01.T01 MTR_2g096380 52.885 104 49 0 12 115 6 109 1.23e-33 124
MsG0880047135.01.T01 MTR_3g045430 48.718 117 59 1 1 116 1 117 5.38e-33 124
MsG0880047135.01.T01 MTR_5g007300 61.364 88 34 0 1 88 53 140 1.86e-32 118
MsG0880047135.01.T01 MTR_5g062790 49.057 106 53 1 10 114 7 112 4.85e-31 119
MsG0880047135.01.T01 MTR_5g088080 49.515 103 51 1 13 114 13 115 4.89e-31 118
MsG0880047135.01.T01 MTR_5g088150 49.515 103 51 1 13 114 13 115 4.89e-31 118
MsG0880047135.01.T01 MTR_5g488210 49.515 103 51 1 13 114 13 115 4.89e-31 118
MsG0880047135.01.T01 MTR_5g088640 49.515 103 51 1 13 114 13 115 4.95e-31 118
MsG0880047135.01.T01 MTR_5g488170 49.515 103 51 1 13 114 13 115 8.34e-31 117
MsG0880047135.01.T01 MTR_4g063100 66.667 72 24 0 44 115 10 81 1.15e-29 113
MsG0880047135.01.T01 MTR_5g088610 46.364 110 58 1 10 118 7 116 1.23e-28 114
MsG0880047135.01.T01 MTR_7g111290 74.242 66 17 0 44 109 2 67 7.25e-28 111
MsG0880047135.01.T01 MTR_3g101290 50.000 110 54 1 9 118 32 140 7.62e-28 108
MsG0880047135.01.T01 MTR_4g094982 47.414 116 60 1 14 129 5 119 1.53e-27 108
MsG0880047135.01.T01 MTR_8g006470 45.192 104 56 1 12 114 10 113 1.79e-27 109
MsG0880047135.01.T01 MTR_1g085880 37.297 185 105 4 12 194 11 186 2.91e-27 106
MsG0880047135.01.T01 MTR_6g055910 66.197 71 24 0 45 115 18 88 8.30e-27 106
MsG0880047135.01.T01 MTR_1g085770 36.548 197 110 6 12 203 11 197 1.15e-26 107
MsG0880047135.01.T01 MTR_5g016510 44.094 127 68 2 14 140 5 128 1.21e-26 107
MsG0880047135.01.T01 MTR_2g096380 62.500 72 27 0 44 115 19 90 1.47e-26 105
MsG0880047135.01.T01 MTR_4g029540 43.269 104 58 1 12 114 10 113 1.78e-26 106
MsG0880047135.01.T01 MTR_4g019370 52.427 103 46 2 14 115 38 138 1.87e-26 107
MsG0880047135.01.T01 MTR_4g128190 45.714 105 43 2 11 114 10 101 8.65e-26 103
MsG0880047135.01.T01 MTR_3g077650 44.444 108 59 1 8 115 175 281 4.99e-25 105
MsG0880047135.01.T01 MTR_5g070020 47.619 105 52 2 12 115 120 222 9.59e-25 103
MsG0880047135.01.T01 MTR_5g049190 41.026 117 60 2 7 115 4 119 1.22e-24 100
MsG0880047135.01.T01 MTR_6g015455 45.614 114 59 2 14 127 5 115 5.03e-24 103
MsG0880047135.01.T01 MTR_3g463400 41.880 117 64 3 1 115 119 233 1.19e-23 101
MsG0880047135.01.T01 MTR_4g105660 43.119 109 59 2 8 115 174 280 1.21e-23 100
MsG0880047135.01.T01 MTR_5g082910 49.495 99 49 1 14 112 19 116 3.13e-23 97.8
MsG0880047135.01.T01 MTR_6g074860 42.056 107 58 2 14 117 4 109 8.77e-23 95.5
MsG0880047135.01.T01 MTR_7g451170 42.308 104 55 2 14 115 191 291 2.21e-22 97.1
MsG0880047135.01.T01 MTR_7g037260 40.566 106 62 1 10 115 141 245 8.53e-22 94.7
MsG0880047135.01.T01 MTR_7g061330 41.739 115 58 2 12 122 111 220 2.27e-21 95.1
MsG0880047135.01.T01 MTR_7g461410 41.739 115 58 2 12 122 111 220 2.27e-21 95.1
MsG0880047135.01.T01 MTR_7g061330 41.739 115 58 2 12 122 75 184 3.13e-21 94.7
MsG0880047135.01.T01 MTR_4g088015 41.584 101 58 1 14 114 221 320 3.81e-21 94.0
MsG0880047135.01.T01 MTR_3g110028 37.838 111 68 1 12 122 83 192 4.72e-21 94.7
MsG0880047135.01.T01 MTR_6g027340 33.333 138 78 2 14 138 16 152 1.90e-20 88.2
MsG0880047135.01.T01 MTR_1g057980 42.157 102 58 1 12 113 78 178 1.92e-20 90.1
MsG0880047135.01.T01 MTR_1g026870 36.036 111 70 1 12 122 83 192 2.59e-20 92.4
MsG0880047135.01.T01 MTR_7g450950 41.176 102 55 2 14 113 157 255 4.95e-20 89.7
MsG0880047135.01.T01 MTR_6g027360 34.752 141 76 3 12 138 76 214 8.36e-20 88.6
MsG0880047135.01.T01 MTR_7g035350 40.000 100 59 1 14 113 225 323 4.73e-19 87.8
MsG0880047135.01.T01 MTR_7g061550 34.167 120 77 1 14 131 7 126 4.83e-19 87.0
MsG0880047135.01.T01 MTR_7g037130 39.423 104 62 1 10 113 141 243 5.38e-19 87.0
MsG0880047135.01.T01 MTR_0023s0210 46.154 78 42 0 11 88 6 83 7.63e-19 80.1
MsG0880047135.01.T01 MTR_5g041570 39.216 102 61 1 14 115 134 234 2.29e-18 85.9
MsG0880047135.01.T01 MTR_4g082040 39.806 103 59 2 14 115 105 205 8.08e-18 84.0
MsG0880047135.01.T01 MTR_3g089045 38.333 120 68 2 14 128 16 134 8.26e-18 82.8
MsG0880047135.01.T01 MTR_5g010650 42.857 98 55 1 12 109 108 204 1.79e-17 83.2
MsG0880047135.01.T01 MTR_6g027370 36.364 110 69 1 14 123 99 207 1.76e-16 79.7
MsG0880047135.01.T01 MTR_5g038910 37.374 99 61 1 17 115 29 126 5.27e-16 78.6
MsG0880047135.01.T01 MTR_5g038910 37.374 99 61 1 17 115 29 126 5.46e-16 79.0
MsG0880047135.01.T01 MTR_4g063100 65.217 46 16 0 70 115 1 46 2.44e-15 73.6
MsG0880047135.01.T01 MTR_7g086960 37.255 102 63 1 14 115 89 189 2.65e-15 76.3
MsG0880047135.01.T01 MTR_8g468380 37.374 99 60 2 17 114 25 122 2.41e-14 73.9
MsG0880047135.01.T01 MTR_2g096380 60.870 46 18 0 70 115 1 46 7.39e-14 69.3
MsG0880047135.01.T01 MTR_6g055910 60.870 46 18 0 70 115 2 47 3.53e-13 68.2
MsG0880047135.01.T01 MTR_1g087540 32.836 134 72 4 91 210 1 130 2.90e-12 66.6
MsG0880047135.01.T01 MTR_8g017480 51.923 52 25 0 1 52 1 52 5.54e-11 57.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880047135.01.T01 AT5G49330 55.157 223 84 2 1 215 1 215 1.46e-75 236
MsG0880047135.01.T01 AT2G47460 70.968 155 34 2 1 147 1 152 3.79e-73 231
MsG0880047135.01.T01 AT3G62610 79.339 121 25 0 1 121 1 121 3.63e-69 219
MsG0880047135.01.T01 AT1G35515 74.138 116 30 0 1 116 1 116 5.21e-61 194
MsG0880047135.01.T01 AT4G09460 73.276 116 31 0 1 116 1 116 1.41e-60 194
MsG0880047135.01.T01 AT4G38620 62.676 142 47 1 1 142 1 136 2.17e-60 195
MsG0880047135.01.T01 AT1G22640 70.690 116 34 0 1 116 1 116 1.04e-59 192
MsG0880047135.01.T01 AT1G06180 70.940 117 34 0 1 117 1 117 1.55e-59 191
MsG0880047135.01.T01 AT2G31180 63.235 136 47 1 1 136 1 133 1.81e-59 191
MsG0880047135.01.T01 AT5G16770 71.552 116 33 0 1 116 1 116 2.59e-59 194
MsG0880047135.01.T01 AT5G16770 71.552 116 33 0 1 116 1 116 2.59e-59 194
MsG0880047135.01.T01 AT5G16770 71.552 116 33 0 1 116 1 116 4.68e-59 193
MsG0880047135.01.T01 AT5G16770 71.552 116 33 0 1 116 1 116 4.68e-59 193
MsG0880047135.01.T01 AT5G15310 38.356 292 161 7 1 276 1 289 4.94e-59 192
MsG0880047135.01.T01 AT3G02940 69.828 116 35 0 1 116 1 116 5.44e-59 192
MsG0880047135.01.T01 AT4G21440 69.828 116 35 0 1 116 1 116 5.68e-59 193
MsG0880047135.01.T01 AT5G15310 70.690 116 34 0 1 116 1 116 6.79e-59 190
MsG0880047135.01.T01 AT3G02940 69.828 116 35 0 1 116 1 116 1.09e-58 192
MsG0880047135.01.T01 AT3G02940 69.828 116 35 0 1 116 1 116 1.09e-58 192
MsG0880047135.01.T01 AT5G15310 70.690 116 34 0 1 116 1 116 1.28e-58 192
MsG0880047135.01.T01 AT3G01140 71.552 116 33 0 1 116 1 116 1.47e-58 192
MsG0880047135.01.T01 AT2G16720 61.702 141 48 1 1 141 1 135 1.52e-58 190
MsG0880047135.01.T01 AT4G28110 68.103 116 37 0 1 116 1 116 2.63e-58 189
MsG0880047135.01.T01 AT3G23250 46.766 201 77 3 1 198 1 174 3.30e-58 189
MsG0880047135.01.T01 AT3G61250 65.546 119 41 0 1 119 1 119 1.52e-57 188
MsG0880047135.01.T01 AT3G13540 69.912 113 34 0 4 116 15 127 9.07e-57 184
MsG0880047135.01.T01 AT1G08810 68.103 116 37 0 1 116 1 116 1.26e-56 185
MsG0880047135.01.T01 AT4G05100 68.376 117 36 1 1 116 1 117 1.96e-56 186
MsG0880047135.01.T01 AT5G16600 46.262 214 97 4 1 210 1 200 1.64e-55 184
MsG0880047135.01.T01 AT5G62470 65.873 126 39 1 1 126 1 122 1.67e-55 184
MsG0880047135.01.T01 AT4G34990 68.966 116 36 0 1 116 1 116 1.90e-55 182
MsG0880047135.01.T01 AT3G01140 69.828 116 35 0 1 116 44 159 1.93e-55 185
MsG0880047135.01.T01 AT1G74650 65.546 119 41 0 1 119 1 119 6.21e-55 182
MsG0880047135.01.T01 AT1G34670 66.379 116 39 0 1 116 1 116 1.10e-54 182
MsG0880047135.01.T01 AT3G47600 50.292 171 79 1 1 165 1 171 1.67e-54 181
MsG0880047135.01.T01 AT5G62470 65.873 126 38 2 1 126 1 121 4.39e-54 181
MsG0880047135.01.T01 AT5G07690 68.421 114 36 0 1 114 1 114 8.95e-54 179
MsG0880047135.01.T01 AT5G10280 46.154 195 93 2 1 189 1 189 1.27e-53 179
MsG0880047135.01.T01 AT4G17785 59.184 147 53 2 1 140 1 147 2.09e-53 179
MsG0880047135.01.T01 AT4G17785 59.184 147 53 2 1 140 1 147 2.40e-53 179
MsG0880047135.01.T01 AT5G65230 65.517 116 40 0 1 116 1 116 2.95e-53 177
MsG0880047135.01.T01 AT5G61420 64.655 116 41 0 1 116 1 116 4.94e-53 178
MsG0880047135.01.T01 AT3G28910 66.379 116 39 0 1 116 1 116 6.39e-53 177
MsG0880047135.01.T01 AT1G66230 63.793 116 42 0 1 116 1 116 3.32e-52 174
MsG0880047135.01.T01 AT1G79180 56.028 141 62 0 2 142 4 144 9.57e-52 173
MsG0880047135.01.T01 AT4G12350 63.793 116 42 0 1 116 1 116 4.30e-51 171
MsG0880047135.01.T01 AT1G56160 64.348 115 41 0 2 116 4 118 6.42e-51 171
MsG0880047135.01.T01 AT5G54230 65.517 116 40 0 1 116 1 116 7.00e-51 171
MsG0880047135.01.T01 AT5G60890 61.207 116 45 0 1 116 1 116 1.11e-50 170
MsG0880047135.01.T01 AT5G56110 64.655 116 41 0 1 116 1 116 1.38e-50 171
MsG0880047135.01.T01 AT5G07700 62.931 116 43 0 1 116 1 116 1.78e-50 171
MsG0880047135.01.T01 AT5G07700 62.931 116 43 0 1 116 1 116 1.78e-50 171
MsG0880047135.01.T01 AT1G16490 62.609 115 43 0 2 116 4 118 1.88e-50 169
MsG0880047135.01.T01 AT4G22680 62.931 116 43 0 1 116 1 116 3.62e-50 168
MsG0880047135.01.T01 AT3G13890 60.345 116 46 0 1 116 1 116 1.53e-49 169
MsG0880047135.01.T01 AT1G18570 63.248 117 42 1 1 116 1 117 2.11e-49 169
MsG0880047135.01.T01 AT1G09540 65.517 116 40 0 1 116 1 116 2.71e-49 169
MsG0880047135.01.T01 AT1G74080 49.112 169 71 4 1 162 1 161 7.38e-49 167
MsG0880047135.01.T01 AT5G26660 64.655 116 41 0 1 116 1 116 1.57e-48 166
MsG0880047135.01.T01 AT5G14340 63.793 116 42 0 1 116 13 128 3.27e-48 163
MsG0880047135.01.T01 AT1G57560 63.793 116 42 0 1 116 1 116 5.21e-48 164
MsG0880047135.01.T01 AT4G01680 64.655 116 41 0 1 116 1 116 5.72e-48 162
MsG0880047135.01.T01 AT1G57560 63.793 116 42 0 1 116 1 116 7.06e-48 162
MsG0880047135.01.T01 AT4G37780 54.135 133 55 2 1 127 1 133 8.43e-48 163
MsG0880047135.01.T01 AT1G74430 63.793 116 42 0 1 116 1 116 1.01e-47 162
MsG0880047135.01.T01 AT4G01680 64.655 116 41 0 1 116 1 116 1.28e-47 164
MsG0880047135.01.T01 AT1G63910 60.345 116 46 0 1 116 1 116 1.30e-47 164
MsG0880047135.01.T01 AT5G23000 59.829 117 46 1 1 116 1 117 1.52e-47 163
MsG0880047135.01.T01 AT5G35550 68.571 105 33 0 12 116 14 118 1.91e-47 160
MsG0880047135.01.T01 AT5G14750 64.423 104 37 0 13 116 17 120 4.41e-47 158
MsG0880047135.01.T01 AT3G13890 56.000 125 46 1 1 116 1 125 1.85e-46 161
MsG0880047135.01.T01 AT5G40330 63.462 104 38 0 13 116 13 116 2.61e-46 157
MsG0880047135.01.T01 AT5G57620 53.788 132 60 1 1 131 1 132 4.29e-46 159
MsG0880047135.01.T01 AT2G36890 57.851 121 50 1 1 120 1 121 7.74e-46 158
MsG0880047135.01.T01 AT3G24310 67.619 105 34 0 11 115 17 121 1.14e-45 156
MsG0880047135.01.T01 AT2G36890 57.851 121 50 1 1 120 42 162 1.21e-45 158
MsG0880047135.01.T01 AT5G62320 58.197 122 44 1 2 116 3 124 1.21e-45 155
MsG0880047135.01.T01 AT2G32460 61.818 110 42 0 6 115 12 121 2.43e-45 161
MsG0880047135.01.T01 AT1G18710 61.207 116 45 0 1 116 1 116 2.76e-45 155
MsG0880047135.01.T01 AT2G32460 63.810 105 38 0 11 115 5 109 2.94e-45 160
MsG0880047135.01.T01 AT3G12820 59.649 114 46 0 3 116 5 118 3.16e-45 154
MsG0880047135.01.T01 AT1G79180 47.024 168 56 1 2 136 4 171 3.29e-45 157
MsG0880047135.01.T01 AT3G27810 65.714 105 36 0 12 116 20 124 4.11e-45 154
MsG0880047135.01.T01 AT3G12720 52.174 138 57 2 6 143 16 144 7.39e-45 155
MsG0880047135.01.T01 AT5G40350 65.714 105 36 0 12 116 17 121 8.85e-45 152
MsG0880047135.01.T01 AT3G49690 57.265 117 49 1 1 116 1 117 1.49e-44 155
MsG0880047135.01.T01 AT4G01680 58.594 128 41 1 1 116 1 128 3.32e-44 155
MsG0880047135.01.T01 AT4G13480 66.990 103 34 0 13 115 7 109 3.86e-44 152
MsG0880047135.01.T01 AT5G12870 60.952 105 41 0 12 116 18 122 7.25e-44 152
MsG0880047135.01.T01 AT5G52600 59.615 104 42 0 12 115 12 115 1.01e-43 149
MsG0880047135.01.T01 AT3G01530 63.810 105 38 0 12 116 25 129 1.18e-43 149
MsG0880047135.01.T01 AT3G27920 60.577 104 41 0 13 116 15 118 1.19e-43 150
MsG0880047135.01.T01 AT3G30210 63.462 104 38 0 11 114 26 129 2.95e-43 150
MsG0880047135.01.T01 AT3G08500 61.111 108 42 0 9 116 27 134 3.45e-43 152
MsG0880047135.01.T01 AT3G28470 58.182 110 46 0 1 110 1 110 9.34e-43 150
MsG0880047135.01.T01 AT5G06100 58.095 105 44 0 11 115 31 135 1.92e-41 150
MsG0880047135.01.T01 AT5G55020 59.813 107 43 0 10 116 24 130 3.42e-41 150
MsG0880047135.01.T01 AT5G06100 58.095 105 44 0 11 115 31 135 7.90e-41 149
MsG0880047135.01.T01 AT5G06100 58.095 105 44 0 11 115 31 135 7.90e-41 149
MsG0880047135.01.T01 AT5G06100 58.095 105 44 0 11 115 31 135 7.90e-41 149
MsG0880047135.01.T01 AT5G06100 58.095 105 44 0 11 115 31 135 7.90e-41 149
MsG0880047135.01.T01 AT3G11440 57.692 104 44 0 12 115 41 144 1.69e-40 148
MsG0880047135.01.T01 AT1G68320 59.615 104 42 0 12 115 19 122 3.41e-40 142
MsG0880047135.01.T01 AT1G25340 59.223 103 42 0 13 115 19 121 4.35e-40 142
MsG0880047135.01.T01 AT4G26930 57.143 105 45 0 10 114 17 121 5.12e-40 145
MsG0880047135.01.T01 AT1G48000 60.952 105 41 0 10 114 30 134 6.03e-40 141
MsG0880047135.01.T01 AT1G66370 37.991 229 122 6 1 224 1 214 6.13e-40 141
MsG0880047135.01.T01 AT3G11440 57.692 104 44 0 12 115 41 144 7.44e-40 147
MsG0880047135.01.T01 AT3G11440 57.692 104 44 0 12 115 41 144 7.44e-40 147
MsG0880047135.01.T01 AT3G11440 57.692 104 44 0 12 115 41 144 7.44e-40 147
MsG0880047135.01.T01 AT2G47190 55.556 108 48 0 8 115 16 123 6.07e-39 139
MsG0880047135.01.T01 AT2G26960 54.717 106 48 0 9 114 17 122 1.07e-37 139
MsG0880047135.01.T01 AT4G25560 36.889 225 109 5 13 210 11 229 3.55e-37 135
MsG0880047135.01.T01 AT3G46130 56.190 105 46 0 11 115 8 112 1.26e-36 132
MsG0880047135.01.T01 AT5G59780 56.311 103 45 0 13 115 9 111 1.49e-36 132
MsG0880047135.01.T01 AT3G06490 60.748 107 42 0 8 114 15 121 5.89e-36 132
MsG0880047135.01.T01 AT1G25340 56.311 103 40 1 13 115 19 116 8.36e-36 131
MsG0880047135.01.T01 AT1G56650 52.459 122 56 1 11 130 7 128 1.05e-35 130
MsG0880047135.01.T01 AT1G66380 58.095 105 44 0 11 115 7 111 1.38e-35 126
MsG0880047135.01.T01 AT3G48920 53.846 104 48 0 13 116 19 122 1.52e-35 130
MsG0880047135.01.T01 AT1G25340 56.311 103 40 1 13 115 19 116 1.78e-35 131
MsG0880047135.01.T01 AT5G49620 46.309 149 63 1 8 139 22 170 5.79e-35 129
MsG0880047135.01.T01 AT1G66390 58.095 105 44 0 11 115 7 111 1.10e-34 127
MsG0880047135.01.T01 AT5G52260 48.855 131 67 0 13 143 13 143 1.37e-34 127
MsG0880047135.01.T01 AT3G53200 56.731 104 45 0 12 115 9 112 3.78e-33 123
MsG0880047135.01.T01 AT5G14750 66.234 77 23 1 40 116 13 86 8.06e-32 117
MsG0880047135.01.T01 AT5G35550 72.222 72 20 0 45 116 50 121 1.47e-31 119
MsG0880047135.01.T01 AT2G26950 48.113 106 55 0 9 114 13 118 1.69e-31 122
MsG0880047135.01.T01 AT5G49620 42.331 163 63 2 8 139 22 184 2.59e-31 120
MsG0880047135.01.T01 AT3G27810 44.366 142 69 2 45 186 4 135 1.02e-30 114
MsG0880047135.01.T01 AT5G40350 67.568 74 24 0 43 116 3 76 2.74e-30 113
MsG0880047135.01.T01 AT5G26660 70.833 72 21 0 45 116 14 85 4.97e-30 117
MsG0880047135.01.T01 AT3G46130 65.753 73 25 0 43 115 8 80 1.19e-28 110
MsG0880047135.01.T01 AT3G47600 60.976 82 28 1 45 126 39 116 1.73e-28 112
MsG0880047135.01.T01 AT5G59780 67.606 71 23 0 45 115 20 90 1.75e-28 110
MsG0880047135.01.T01 AT3G46130 67.606 71 23 0 45 115 20 90 3.36e-28 110
MsG0880047135.01.T01 AT3G12820 64.286 70 25 0 47 116 1 70 8.17e-28 107
MsG0880047135.01.T01 AT3G60460 44.037 109 60 1 7 114 6 114 2.43e-27 109
MsG0880047135.01.T01 AT3G09230 46.957 115 52 2 14 124 55 164 3.07e-26 107
MsG0880047135.01.T01 AT3G53200 64.789 71 25 0 45 115 9 79 4.01e-26 103
MsG0880047135.01.T01 AT3G27785 45.946 111 55 2 7 115 182 289 6.14e-25 104
MsG0880047135.01.T01 AT4G18770 37.580 157 87 5 8 158 211 362 7.25e-25 104
MsG0880047135.01.T01 AT1G22640 69.492 59 18 0 58 116 1 59 1.03e-24 99.8
MsG0880047135.01.T01 AT2G39880 50.943 106 43 2 14 115 50 150 2.22e-24 102
MsG0880047135.01.T01 AT3G55730 50.980 102 49 1 14 115 56 156 2.29e-24 102
MsG0880047135.01.T01 AT2G23290 49.020 102 51 1 14 115 13 113 9.17e-24 99.8
MsG0880047135.01.T01 AT5G58850 45.192 104 56 1 12 115 103 205 1.04e-23 101
MsG0880047135.01.T01 AT5G40360 36.441 118 73 2 12 129 156 271 1.47e-23 99.8
MsG0880047135.01.T01 AT4G37260 48.039 102 52 1 14 115 13 113 2.09e-23 99.0
MsG0880047135.01.T01 AT3G50060 46.078 102 54 1 14 115 6 106 9.28e-23 96.7
MsG0880047135.01.T01 AT5G11050 44.660 103 54 2 14 115 105 205 3.42e-22 96.7
MsG0880047135.01.T01 AT5G14750 62.712 59 22 0 58 116 1 59 3.63e-22 91.3
MsG0880047135.01.T01 AT5G14750 62.712 59 22 0 58 116 1 59 3.63e-22 91.3
MsG0880047135.01.T01 AT1G66380 59.722 72 29 0 44 115 7 78 4.53e-22 89.7
MsG0880047135.01.T01 AT3G23250 36.111 144 62 3 58 198 1 117 6.67e-22 92.8
MsG0880047135.01.T01 AT1G18960 40.777 103 58 2 14 116 10 109 7.10e-22 94.4
MsG0880047135.01.T01 AT5G11510 38.938 113 64 2 12 122 79 188 3.90e-21 94.7
MsG0880047135.01.T01 AT5G11510 38.938 113 64 2 12 122 79 188 3.90e-21 94.7
MsG0880047135.01.T01 AT5G11510 38.938 113 64 2 12 122 79 188 3.90e-21 94.7
MsG0880047135.01.T01 AT1G71030 57.576 66 28 0 51 116 5 70 4.98e-21 89.4
MsG0880047135.01.T01 AT1G71030 57.576 66 28 0 51 116 19 84 5.32e-21 89.4
MsG0880047135.01.T01 AT5G11510 38.938 113 64 2 12 122 79 188 5.58e-21 94.4
MsG0880047135.01.T01 AT5G11510 38.938 113 64 2 12 122 79 188 5.76e-21 94.4
MsG0880047135.01.T01 AT5G67300 45.098 102 55 1 14 115 6 106 6.74e-21 91.7
MsG0880047135.01.T01 AT5G02320 40.171 117 61 2 12 124 125 236 6.79e-21 93.6
MsG0880047135.01.T01 AT5G02320 40.171 117 61 2 12 124 125 236 6.79e-21 93.6
MsG0880047135.01.T01 AT5G02320 39.823 113 67 1 12 124 65 176 7.79e-21 93.2
MsG0880047135.01.T01 AT1G17950 41.176 102 59 1 14 115 5 105 1.32e-20 89.7
MsG0880047135.01.T01 AT1G66380 51.220 82 40 0 11 92 7 88 1.34e-20 85.9
MsG0880047135.01.T01 AT3G09370 41.593 113 57 2 12 120 128 235 1.88e-20 92.4
MsG0880047135.01.T01 AT3G09370 41.593 113 57 2 12 120 133 240 1.90e-20 92.4
MsG0880047135.01.T01 AT3G09370 41.593 113 57 2 12 120 141 248 2.35e-20 92.0
MsG0880047135.01.T01 AT4G32730 35.606 132 82 2 12 141 85 215 2.96e-20 92.0
MsG0880047135.01.T01 AT4G32730 35.606 132 82 2 12 141 85 215 4.06e-20 92.0
MsG0880047135.01.T01 AT4G32730 35.606 132 82 2 12 141 85 215 4.06e-20 92.0
MsG0880047135.01.T01 AT4G32730 35.606 132 82 2 12 141 85 215 4.06e-20 92.0
MsG0880047135.01.T01 AT4G32730 35.606 132 82 2 12 141 85 215 4.06e-20 92.0
MsG0880047135.01.T01 AT1G69560 32.258 155 85 3 9 144 102 255 7.57e-20 89.0
MsG0880047135.01.T01 AT1G69560 33.333 156 82 4 9 144 118 271 1.08e-19 89.0
MsG0880047135.01.T01 AT1G73410 42.056 107 59 2 10 115 2 106 6.24e-19 85.1
MsG0880047135.01.T01 AT4G33450 35.714 126 74 3 3 127 13 132 6.97e-19 85.1
MsG0880047135.01.T01 AT1G73410 42.056 107 59 2 10 115 2 106 8.99e-19 83.6
MsG0880047135.01.T01 AT1G26780 39.423 104 62 1 12 115 96 198 3.58e-18 84.7
MsG0880047135.01.T01 AT1G26780 40.952 105 59 2 12 115 96 198 4.50e-18 83.2
MsG0880047135.01.T01 AT2G25230 37.963 108 66 1 7 114 19 125 9.77e-18 81.3
MsG0880047135.01.T01 AT5G17800 37.864 103 63 1 14 116 93 194 4.14e-17 81.3
MsG0880047135.01.T01 AT2G37630 34.167 120 76 2 14 131 4 122 4.59e-17 81.6
MsG0880047135.01.T01 AT3G29020 35.922 103 65 1 14 116 65 166 8.76e-17 79.0
MsG0880047135.01.T01 AT3G29020 35.922 103 65 1 14 116 67 168 1.30e-16 79.3
MsG0880047135.01.T01 AT4G00540 37.391 115 70 1 11 123 100 214 1.40e-16 80.5
MsG0880047135.01.T01 AT4G00540 37.391 115 70 1 11 123 98 212 2.40e-16 79.7
MsG0880047135.01.T01 AT5G59780 67.391 46 15 0 70 115 1 46 5.77e-16 75.1
MsG0880047135.01.T01 AT3G46130 67.391 46 15 0 70 115 1 46 1.04e-15 74.7
MsG0880047135.01.T01 AT1G14350 37.374 99 61 1 17 115 28 125 1.90e-15 77.0
MsG0880047135.01.T01 AT1G14350 37.374 99 61 1 17 115 28 125 1.90e-15 77.0
MsG0880047135.01.T01 AT4G25560 28.916 166 89 4 70 210 2 163 6.72e-15 73.2
MsG0880047135.01.T01 AT5G39700 36.275 102 64 1 15 116 57 157 8.22e-15 72.4
MsG0880047135.01.T01 AT5G40430 35.185 108 68 2 7 114 47 152 8.32e-15 73.6
MsG0880047135.01.T01 AT2G02820 35.354 99 63 1 17 115 33 130 2.90e-14 73.2
MsG0880047135.01.T01 AT2G02820 35.354 99 63 1 17 115 33 130 5.39e-14 72.8
MsG0880047135.01.T01 AT2G02820 35.354 99 63 1 17 115 33 130 5.41e-14 72.8
MsG0880047135.01.T01 AT1G74650 58.140 43 18 0 77 119 1 43 1.62e-12 67.0
MsG0880047135.01.T01 AT3G28910 65.000 40 14 0 77 116 1 40 2.05e-12 66.6
MsG0880047135.01.T01 AT5G61420 72.222 36 10 0 81 116 2 37 4.50e-12 66.2

Find 59 sgRNAs with CRISPR-Local

Find 93 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTATTGGAACTCTCATTTA+AGG 0.123429 8:-82514165 MsG0880047135.01.T01:CDS
TCAACTAATTCGTTCATATT+AGG 0.154511 8:+82513905 None:intergenic
AATATTCTAGATCCTGATTT+TGG 0.176502 8:-82513755 MsG0880047135.01.T01:CDS
GCCAAGATGTTAATTGCTTC+TGG 0.239272 8:-82513550 MsG0880047135.01.T01:CDS
AAGATCCTTCACCATGTTCT+TGG 0.254314 8:+82515333 None:intergenic
CAACTAATTCGTTCATATTA+GGG 0.276288 8:+82513906 None:intergenic
GCTCCTTGCTGTGAGAAAAT+TGG 0.276930 8:-82515410 MsG0880047135.01.T01:CDS
ATCAAGGGATCAATGATAAA+AGG 0.303189 8:+82513502 None:intergenic
GTCAAGTTGCATGCTGTTCT+TGG 0.310664 8:-82515073 MsG0880047135.01.T01:CDS
TGCATGCTGTTCTTGGTAAC+AGG 0.341708 8:-82515066 MsG0880047135.01.T01:intron
CTACCTTCTAAATGCATATC+AGG 0.360676 8:+82513620 None:intergenic
ATCTAGAATATTATCATCAT+TGG 0.375461 8:+82513766 None:intergenic
GAGAAAATTGGTTTGAAGAA+AGG 0.383715 8:-82515398 MsG0880047135.01.T01:CDS
AACGAATTAGTTGACACTTT+GGG 0.397718 8:-82513896 MsG0880047135.01.T01:CDS
AAGAACATGGTGAAGGATCT+TGG 0.398904 8:-82515331 MsG0880047135.01.T01:CDS
TCATCATCTAACCATTCATA+TGG 0.404686 8:+82513872 None:intergenic
CCCAGAAGCAATTAACATCT+TGG 0.415039 8:+82513549 None:intergenic
ATGGTGGTAGTGGTGGTGTT+TGG 0.417643 8:-82513712 MsG0880047135.01.T01:CDS
CCAAGATGTTAATTGCTTCT+GGG 0.418361 8:-82513549 MsG0880047135.01.T01:CDS
AAGGTCCCATTGTTGATTGT+AGG 0.425865 8:+82513586 None:intergenic
TCCTCTACCAGCTCTTCTCT+TGG 0.435104 8:+82514060 None:intergenic
GAACGAATTAGTTGACACTT+TGG 0.445667 8:-82513897 MsG0880047135.01.T01:CDS
CTAAGTTACATGTTTGAAAG+TGG 0.451255 8:-82513839 MsG0880047135.01.T01:CDS
CCCACTAGTACACCAAAATC+AGG 0.454662 8:+82513743 None:intergenic
TTGTTGTTCTGATCTTGCCT+TGG 0.454759 8:+82514031 None:intergenic
TGGCCTGATATGCATTTAGA+AGG 0.455814 8:-82513623 MsG0880047135.01.T01:CDS
GGAAATAATGATGGTGGTAG+TGG 0.470078 8:-82513722 MsG0880047135.01.T01:CDS
ACACTTTGGGACCATATGAA+TGG 0.470929 8:-82513883 MsG0880047135.01.T01:CDS
TTGGTTTGAAGAAAGGAAGA+TGG 0.472897 8:-82515391 MsG0880047135.01.T01:CDS
ATTCTGTTTATGAATATCAA+TGG 0.490117 8:-82513643 MsG0880047135.01.T01:CDS
TTAACAGCAGCTATGTCAAT+TGG 0.494545 8:+82514097 None:intergenic
ATCTCATTATCTGTACGTCC+TGG 0.494808 8:+82514193 None:intergenic
TCATCAAATGGTGCTGAAAG+TGG 0.502394 8:-82513686 MsG0880047135.01.T01:CDS
GAAAGAGTTGCAGACTAAGA+TGG 0.508370 8:-82515159 MsG0880047135.01.T01:CDS
GCTGCTTCCAAGAGAAGAGC+TGG 0.520358 8:-82514067 MsG0880047135.01.T01:CDS
CATCAAATGGTGCTGAAAGT+GGG 0.527690 8:-82513685 MsG0880047135.01.T01:CDS
GAGAGGTAACATCACTCCTC+AGG 0.534201 8:-82515110 MsG0880047135.01.T01:CDS
GGTGTTTGGAGTTCATCAAA+TGG 0.542452 8:-82513698 MsG0880047135.01.T01:CDS
TTCAATCCTACAATCAACAA+TGG 0.545566 8:-82513592 MsG0880047135.01.T01:CDS
TCCAAGAGAAGAGCTGGTAG+AGG 0.545939 8:-82514061 MsG0880047135.01.T01:CDS
TCAATCCTACAATCAACAAT+GGG 0.548140 8:-82513591 MsG0880047135.01.T01:CDS
TTCTCTTGGAAGCAGCTGCT+AGG 0.551219 8:+82514074 None:intergenic
ACAATGATTTCTTCCTCCTG+AGG 0.552629 8:+82515094 None:intergenic
GTACTAGTGGGAAATAATGA+TGG 0.558595 8:-82513731 MsG0880047135.01.T01:CDS
AGGAAGATGGACTGCTGAAG+AGG 0.567938 8:-82515378 MsG0880047135.01.T01:CDS
TGTAGGTGGTCTGTAATAGC+TGG 0.577208 8:-82514223 MsG0880047135.01.T01:intron
ATATTAGGTTTGTTGAGATG+TGG 0.582195 8:-82515181 MsG0880047135.01.T01:intron
AATAATGATGGTGGTAGTGG+TGG 0.585866 8:-82513719 MsG0880047135.01.T01:CDS
GTAATAGCTGGACATTTACC+AGG 0.593050 8:-82514211 MsG0880047135.01.T01:CDS
ATCAAATGGTGCTGAAAGTG+GGG 0.604026 8:-82513684 MsG0880047135.01.T01:CDS
TATATCCAAGAACATGGTGA+AGG 0.631658 8:-82515338 MsG0880047135.01.T01:CDS
AGGTAACATCACTCCTCAGG+AGG 0.641469 8:-82515107 MsG0880047135.01.T01:CDS
CTTGGCCTTGTTGATCACAA+AGG 0.641564 8:+82513567 None:intergenic
CTGGTAGAGGAGCTGCACCA+AGG 0.656409 8:-82514048 MsG0880047135.01.T01:CDS
TTAAGATCAGATGTGAAGAG+AGG 0.661497 8:-82515127 MsG0880047135.01.T01:CDS
AAAGAAGAAGAGCTACAACA+AGG 0.666559 8:-82513956 MsG0880047135.01.T01:CDS
ACTGATTATATCCAAGAACA+TGG 0.678325 8:-82515344 MsG0880047135.01.T01:CDS
CTAGTGGGAAATAATGATGG+TGG 0.703436 8:-82513728 MsG0880047135.01.T01:CDS
TGGGACCTTTGTGATCAACA+AGG 0.735726 8:-82513572 MsG0880047135.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATATATATATATATAAA+TGG + Chr8:82514186-82514167 None:intergenic 0.0%
!! ATAATGAGATAAAAAATTAT+TGG - Chr8:82514750-82514769 MsG0880047135.01.T01:intron 10.0%
!! ATATACATAAATGAAATATT+AGG - Chr8:82513734-82513753 MsG0880047135.01.T01:CDS 10.0%
!! TCTATAACAAAAATAAAATA+AGG + Chr8:82514490-82514509 None:intergenic 10.0%
!!! TGTCTATTTTTATTTTTTTT+TGG + Chr8:82514318-82514337 None:intergenic 10.0%
!! CAATATTAATACATTGAAAT+TGG - Chr8:82514633-82514652 MsG0880047135.01.T01:intron 15.0%
!! ATTCTGTTTATGAATATCAA+TGG - Chr8:82515287-82515306 MsG0880047135.01.T01:intron 20.0%
!!! ATCTAGAATATTATCATCAT+TGG + Chr8:82515167-82515186 None:intergenic 20.0%
!!! ATGTAGATTAATTTGAAATG+AGG + Chr8:82513954-82513973 None:intergenic 20.0%
!!! ATTGAAATTGGTGTTTAATT+TGG - Chr8:82514645-82514664 MsG0880047135.01.T01:intron 20.0%
!!! CTACTTAAAAATTGTTGTTA+TGG - Chr8:82514683-82514702 MsG0880047135.01.T01:intron 20.0%
!!! TTATTTTTATTCTCATGATC+TGG + Chr8:82515130-82515149 None:intergenic 20.0%
! AATCTTACAATACATGTAGA+AGG + Chr8:82514057-82514076 None:intergenic 25.0%
! ATTATTGGAACTCTCATTTA+AGG - Chr8:82514765-82514784 MsG0880047135.01.T01:intron 25.0%
! CAACTAATTCGTTCATATTA+GGG + Chr8:82515027-82515046 None:intergenic 25.0%
! CAATTAAACAGCTAGTAAAT+TGG + Chr8:82513998-82514017 None:intergenic 25.0%
! CAATTTACTAGCTGTTTAAT+TGG - Chr8:82513996-82514015 MsG0880047135.01.T01:CDS 25.0%
! TACACACGTATAATTTGAAA+AGG + Chr8:82514106-82514125 None:intergenic 25.0%
! TCAACTAATTCGTTCATATT+AGG + Chr8:82515028-82515047 None:intergenic 25.0%
!! AAAATTGTTGTTATGGTTGT+AGG - Chr8:82514690-82514709 MsG0880047135.01.T01:intron 25.0%
!! AATATTCTAGATCCTGATTT+TGG - Chr8:82515175-82515194 MsG0880047135.01.T01:CDS 25.0%
!!! AATCATTTACCTGCATTTTT+TGG + Chr8:82513634-82513653 None:intergenic 25.0%
!!! AATGATAAAAGGCATTTTCT+TGG + Chr8:82515420-82515439 None:intergenic 25.0%
AACGAATTAGTTGACACTTT+GGG - Chr8:82515034-82515053 MsG0880047135.01.T01:intron 30.0%
ACTGATTATATCCAAGAACA+TGG - Chr8:82513586-82513605 MsG0880047135.01.T01:CDS 30.0%
CAACAAAAACAACAAGAAAG+AGG - Chr8:82514916-82514935 MsG0880047135.01.T01:intron 30.0%
CTAAGTTACATGTTTGAAAG+TGG - Chr8:82515091-82515110 MsG0880047135.01.T01:CDS 30.0%
TCAATCCTACAATCAACAAT+GGG - Chr8:82515339-82515358 MsG0880047135.01.T01:CDS 30.0%
TCATCATCTAACCATTCATA+TGG + Chr8:82515061-82515080 None:intergenic 30.0%
TGAGTTTATCTAGTGACATA+AGG - Chr8:82514355-82514374 MsG0880047135.01.T01:intron 30.0%
TGGTTTCAGAATGTTAACAA+AGG + Chr8:82514145-82514164 None:intergenic 30.0%
TTCAATCCTACAATCAACAA+TGG - Chr8:82515338-82515357 MsG0880047135.01.T01:CDS 30.0%
! AAAGTGTTTGAGAGATCTAA+TGG - Chr8:82514385-82514404 MsG0880047135.01.T01:intron 30.0%
! CTAGCTGTTTAATTGGTAAT+TGG - Chr8:82514003-82514022 MsG0880047135.01.T01:CDS 30.0%
! TCTTTTCTTGTATGTAGTGT+TGG + Chr8:82514959-82514978 None:intergenic 30.0%
! TTTTTGTGAGATGACATTGT+CGG + Chr8:82514225-82514244 None:intergenic 30.0%
!! ATATTAGGTTTGTTGAGATG+TGG - Chr8:82513749-82513768 MsG0880047135.01.T01:CDS 30.0%
!! GAGAAAATTGGTTTGAAGAA+AGG - Chr8:82513532-82513551 MsG0880047135.01.T01:CDS 30.0%
!! TTCTACAAGCTTTCTAAGAT+AGG - Chr8:82514447-82514466 MsG0880047135.01.T01:intron 30.0%
!!! AAAGGCATTTTCTTGGTAAT+TGG + Chr8:82515413-82515432 None:intergenic 30.0%
AAAGAAGAAGAGCTACAACA+AGG - Chr8:82514974-82514993 MsG0880047135.01.T01:intron 35.0%
AGATCTTTGCCAAAAAATGC+AGG - Chr8:82513622-82513641 MsG0880047135.01.T01:CDS 35.0%
CCAAGATGTTAATTGCTTCT+GGG - Chr8:82515381-82515400 MsG0880047135.01.T01:CDS 35.0%
CTACCTTCTAAATGCATATC+AGG + Chr8:82515313-82515332 None:intergenic 35.0%
GAACGAATTAGTTGACACTT+TGG - Chr8:82515033-82515052 MsG0880047135.01.T01:intron 35.0%
GACAATGTCATCTCACAAAA+AGG - Chr8:82514224-82514243 MsG0880047135.01.T01:intron 35.0%
GTACTAGTGGGAAATAATGA+TGG - Chr8:82515199-82515218 MsG0880047135.01.T01:intron 35.0%
TATATCCAAGAACATGGTGA+AGG - Chr8:82513592-82513611 MsG0880047135.01.T01:CDS 35.0%
TTAACAGCAGCTATGTCAAT+TGG + Chr8:82514836-82514855 None:intergenic 35.0%
TTAAGATCAGATGTGAAGAG+AGG - Chr8:82513803-82513822 MsG0880047135.01.T01:CDS 35.0%
! AAACCAATTTTCTCACAGCA+AGG + Chr8:82513526-82513545 None:intergenic 35.0%
! ATTGTTGTTATGGTTGTAGG+TGG - Chr8:82514693-82514712 MsG0880047135.01.T01:intron 35.0%
! TTGGTTTGAAGAAAGGAAGA+TGG - Chr8:82513539-82513558 MsG0880047135.01.T01:CDS 35.0%
AAGAACATGGTGAAGGATCT+TGG - Chr8:82513599-82513618 MsG0880047135.01.T01:CDS 40.0%
AAGATCCTTCACCATGTTCT+TGG + Chr8:82513600-82513619 None:intergenic 40.0%
ACAATGATTTCTTCCTCCTG+AGG + Chr8:82513839-82513858 None:intergenic 40.0%
ATCTCATTATCTGTACGTCC+TGG + Chr8:82514740-82514759 None:intergenic 40.0%
CCCAGAAGCAATTAACATCT+TGG + Chr8:82515384-82515403 None:intergenic 40.0%
CTAGTGGGAAATAATGATGG+TGG - Chr8:82515202-82515221 MsG0880047135.01.T01:intron 40.0%
GAAAGAGTTGCAGACTAAGA+TGG - Chr8:82513771-82513790 MsG0880047135.01.T01:CDS 40.0%
GCCAAGATGTTAATTGCTTC+TGG - Chr8:82515380-82515399 MsG0880047135.01.T01:CDS 40.0%
GTAATAGCTGGACATTTACC+AGG - Chr8:82514719-82514738 MsG0880047135.01.T01:intron 40.0%
TGGCCTGATATGCATTTAGA+AGG - Chr8:82515307-82515326 MsG0880047135.01.T01:intron 40.0%
! AAGGTCCCATTGTTGATTGT+AGG + Chr8:82515347-82515366 None:intergenic 40.0%
! ATCAAATGGTGCTGAAAGTG+GGG - Chr8:82515246-82515265 MsG0880047135.01.T01:intron 40.0%
! CATCAAATGGTGCTGAAAGT+GGG - Chr8:82515245-82515264 MsG0880047135.01.T01:intron 40.0%
! GGTGTTTGGAGTTCATCAAA+TGG - Chr8:82515232-82515251 MsG0880047135.01.T01:intron 40.0%
! TCATCAAATGGTGCTGAAAG+TGG - Chr8:82515244-82515263 MsG0880047135.01.T01:intron 40.0%
! TTGTTGTTCTGATCTTGCCT+TGG + Chr8:82514902-82514921 None:intergenic 40.0%
!! AATAATGATGGTGGTAGTGG+TGG - Chr8:82515211-82515230 MsG0880047135.01.T01:intron 40.0%
!! ACACTTTGGGACCATATGAA+TGG - Chr8:82515047-82515066 MsG0880047135.01.T01:intron 40.0%
!! CCTGATTTTGGTGTACTAGT+GGG - Chr8:82515187-82515206 MsG0880047135.01.T01:intron 40.0%
!! GGAAATAATGATGGTGGTAG+TGG - Chr8:82515208-82515227 MsG0880047135.01.T01:intron 40.0%
!! TCCTGATTTTGGTGTACTAG+TGG - Chr8:82515186-82515205 MsG0880047135.01.T01:intron 40.0%
CCCACTAGTACACCAAAATC+AGG + Chr8:82515190-82515209 None:intergenic 45.0%
GATGACATTGTCGGCAACAA+AGG + Chr8:82514216-82514235 None:intergenic 45.0%
TGGGACCTTTGTGATCAACA+AGG - Chr8:82515358-82515377 MsG0880047135.01.T01:CDS 45.0%
TGTAGGTGGTCTGTAATAGC+TGG - Chr8:82514707-82514726 MsG0880047135.01.T01:intron 45.0%
! GCTCCTTGCTGTGAGAAAAT+TGG - Chr8:82513520-82513539 MsG0880047135.01.T01:CDS 45.0%
! GTCAAGTTGCATGCTGTTCT+TGG - Chr8:82513857-82513876 MsG0880047135.01.T01:CDS 45.0%
! TGCATGCTGTTCTTGGTAAC+AGG - Chr8:82513864-82513883 MsG0880047135.01.T01:CDS 45.0%
! TGCTGTTCTTGGTAACAGGT+AGG - Chr8:82513868-82513887 MsG0880047135.01.T01:CDS 45.0%
!! CTTGGCCTTGTTGATCACAA+AGG + Chr8:82515366-82515385 None:intergenic 45.0%
!!! AATTTTTTTATATGATTAAT+TGG + Chr8:82514611-82514630 None:intergenic 5.0%
AGGTAACATCACTCCTCAGG+AGG - Chr8:82513823-82513842 MsG0880047135.01.T01:CDS 50.0%
GAGAGGTAACATCACTCCTC+AGG - Chr8:82513820-82513839 MsG0880047135.01.T01:CDS 50.0%
TCCAAGAGAAGAGCTGGTAG+AGG - Chr8:82514869-82514888 MsG0880047135.01.T01:intron 50.0%
TCCTCTACCAGCTCTTCTCT+TGG + Chr8:82514873-82514892 None:intergenic 50.0%
TTCTCTTGGAAGCAGCTGCT+AGG + Chr8:82514859-82514878 None:intergenic 50.0%
!! AGGAAGATGGACTGCTGAAG+AGG - Chr8:82513552-82513571 MsG0880047135.01.T01:CDS 50.0%
!! ATGGTGGTAGTGGTGGTGTT+TGG - Chr8:82515218-82515237 MsG0880047135.01.T01:intron 50.0%
GCTGCTTCCAAGAGAAGAGC+TGG - Chr8:82514863-82514882 MsG0880047135.01.T01:intron 55.0%
CTGGTAGAGGAGCTGCACCA+AGG - Chr8:82514882-82514901 MsG0880047135.01.T01:intron 60.0%
Chromosome Type Strat End Strand Name
Chr8 gene 82513511 82515441 82513511 ID=MsG0880047135.01;Name=MsG0880047135.01
Chr8 mRNA 82513511 82515441 82513511 ID=MsG0880047135.01.T01;Parent=MsG0880047135.01;Name=MsG0880047135.01.T01;_AED=0.50;_eAED=0.50;_QI=0|0|0|1|1|1|3|0|330
Chr8 exon 82515309 82515441 82515309 ID=MsG0880047135.01.T01:exon:35316;Parent=MsG0880047135.01.T01
Chr8 exon 82515067 82515196 82515067 ID=MsG0880047135.01.T01:exon:35315;Parent=MsG0880047135.01.T01
Chr8 exon 82513511 82514240 82513511 ID=MsG0880047135.01.T01:exon:35314;Parent=MsG0880047135.01.T01
Chr8 CDS 82515309 82515441 82515309 ID=MsG0880047135.01.T01:cds;Parent=MsG0880047135.01.T01
Chr8 CDS 82515067 82515196 82515067 ID=MsG0880047135.01.T01:cds;Parent=MsG0880047135.01.T01
Chr8 CDS 82513511 82514240 82513511 ID=MsG0880047135.01.T01:cds;Parent=MsG0880047135.01.T01
Gene Sequence

>MsG0880047135.01.T01

ATGGGAAGAGCTCCTTGCTGTGAGAAAATTGGTTTGAAGAAAGGAAGATGGACTGCTGAAGAGGATAAGATCTTAACTGATTATATCCAAGAACATGGTGAAGGATCTTGGAGATCTTTGCCAAAAAATGCAGGTTTGTTGAGATGTGGAAAGAGTTGCAGACTAAGATGGATAAACTACTTAAGATCAGATGTGAAGAGAGGTAACATCACTCCTCAGGAGGAAGAAATCATTGTCAAGTTGCATGCTGTTCTTGGTAACAGGTGGTCTGTAATAGCTGGACATTTACCAGGACGTACAGATAATGAGATAAAAAATTATTGGAACTCTCATTTAAGGAGAAAAATTTACTGTTTCATGAAGTCATTAAATGAGTCATTTTCACCAATTGACATAGCTGCTGTTAACCTAGCAGCTGCTTCCAAGAGAAGAGCTGGTAGAGGAGCTGCACCAAGGCAAGATCAGAACAACAAAAACAACAAGAAAGAGGTTCTTGAAGTTCAATTACCAACACTACATACAAGAAAAGAAGAAGAGCTACAACAAGGTTATAATAATACTAATAATTCATCATGCCCTAATATGAACGAATTAGTTGACACTTTGGGACCATATGAATGGTTAGATGATGAAATTATTAAACTAAGTTACATGTTTGAAAGTGGAGTACTTGTTAGTCCAGATCATGAGAATAAAAATAATAATTTTAATGTAACCAATGATGATAATATTCTAGATCCTGATTTTGGTGTACTAGTGGGAAATAATGATGGTGGTAGTGGTGGTGTTTGGAGTTCATCAAATGGTGCTGAAAGTGGGGAGTGTAATTCTTCTGTGAATTCTGTTTATGAATATCAATGGCCTGATATGCATTTAGAAGGTAGTTGTGTTCAATCCTACAATCAACAATGGGACCTTTGTGATCAACAAGGCCAAGATGTTAATTGCTTCTGGGATACTTCCAATTACCAAGAAAATGCCTTTTATCATTGA

Protein sequence

>MsG0880047135.01.T01

MGRAPCCEKIGLKKGRWTAEEDKILTDYIQEHGEGSWRSLPKNAGLLRCGKSCRLRWINYLRSDVKRGNITPQEEEIIVKLHAVLGNRWSVIAGHLPGRTDNEIKNYWNSHLRRKIYCFMKSLNESFSPIDIAAVNLAAASKRRAGRGAAPRQDQNNKNNKKEVLEVQLPTLHTRKEEELQQGYNNTNNSSCPNMNELVDTLGPYEWLDDEIIKLSYMFESGVLVSPDHENKNNNFNVTNDDNILDPDFGVLVGNNDGGSGGVWSSSNGAESGECNSSVNSVYEYQWPDMHLEGSCVQSYNQQWDLCDQQGQDVNCFWDTSNYQENAFYH*