Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880047436.01.T01 | XP_003610056.2 | 76.106 | 226 | 22 | 2 | 136 | 333 | 280 | 501 | 1.65E-97 | 310 |
| MsG0880047436.01.T01 | XP_003610056.2 | 56.25 | 128 | 39 | 3 | 1 | 127 | 1 | 112 | 3.61E-26 | 120 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880047436.01.T01 | Q8VYT2 | 46.964 | 247 | 72 | 10 | 136 | 332 | 286 | 523 | 6.25E-47 | 170 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880047436.01.T01 | G7JUA8 | 76.106 | 226 | 22 | 2 | 136 | 333 | 280 | 501 | 7.89e-98 | 310 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048919.01 | MsG0880047436.01 | 0.816444 | 5.513873e-52 | 3.907404e-49 |
| MsG0080049023.01 | MsG0880047436.01 | 0.804811 | 1.805920e-49 | 9.402077e-47 |
| MsG0080049038.01 | MsG0880047436.01 | 0.803439 | 3.484029e-49 | 1.750854e-46 |
| MsG0080049066.01 | MsG0880047436.01 | 0.814564 | 1.445194e-51 | 9.730337e-49 |
| MsG0080049133.01 | MsG0880047436.01 | 0.818180 | 2.242414e-52 | 1.666639e-49 |
| MsG0180001054.01 | MsG0880047436.01 | 0.802744 | 4.850994e-49 | 2.394923e-46 |
| MsG0880044545.01 | MsG0880047436.01 | 0.825993 | 3.461326e-54 | 3.205367e-51 |
| MsG0880044548.01 | MsG0880047436.01 | 0.822318 | 2.526442e-53 | 2.107419e-50 |
| MsG0880044968.01 | MsG0880047436.01 | 0.803268 | 3.781193e-49 | 1.891814e-46 |
| MsG0880045063.01 | MsG0880047436.01 | 0.821684 | 3.542133e-53 | 2.901770e-50 |
| MsG0880045369.01 | MsG0880047436.01 | 0.809535 | 1.803482e-50 | 1.061631e-47 |
| MsG0880045385.01 | MsG0880047436.01 | 0.809515 | 1.821576e-50 | 1.071686e-47 |
| MsG0880046105.01 | MsG0880047436.01 | 0.812170 | 4.851361e-51 | 3.062412e-48 |
| MsG0880046341.01 | MsG0880047436.01 | 0.816051 | 6.747455e-52 | 4.731204e-49 |
| MsG0880047436.01 | MsG0880047664.01 | -0.801293 | 9.642289e-49 | 4.588037e-46 |
| MsG0180002808.01 | MsG0880047436.01 | -0.800968 | 1.123560e-48 | 5.302686e-46 |
| MsG0180003758.01 | MsG0880047436.01 | 0.801781 | 7.659377e-49 | 3.689582e-46 |
| MsG0180004322.01 | MsG0880047436.01 | 0.806800 | 6.899166e-50 | 3.779580e-47 |
| MsG0180004502.01 | MsG0880047436.01 | 0.801274 | 9.728489e-49 | 4.626841e-46 |
| MsG0180004581.01 | MsG0880047436.01 | 0.804328 | 2.277772e-49 | 1.171085e-46 |
| MsG0180004787.01 | MsG0880047436.01 | 0.801204 | 1.005189e-48 | 4.772198e-46 |
| MsG0180005767.01 | MsG0880047436.01 | 0.811382 | 7.198152e-51 | 4.449087e-48 |
| MsG0180005848.01 | MsG0880047436.01 | 0.818998 | 1.463035e-52 | 1.112319e-49 |
| MsG0280006381.01 | MsG0880047436.01 | 0.805827 | 1.106334e-49 | 5.911915e-47 |
| MsG0780040321.01 | MsG0880047436.01 | 0.806459 | 8.143370e-50 | 4.422480e-47 |
| MsG0780040640.01 | MsG0880047436.01 | 0.804065 | 2.583100e-49 | 1.319226e-46 |
| MsG0780040685.01 | MsG0880047436.01 | 0.812977 | 3.230512e-51 | 2.083388e-48 |
| MsG0780041492.01 | MsG0880047436.01 | 0.816890 | 4.378532e-52 | 3.141185e-49 |
| MsG0780041531.01 | MsG0880047436.01 | 0.803446 | 3.473136e-49 | 1.745675e-46 |
| MsG0780041625.01 | MsG0880047436.01 | 0.812903 | 3.354184e-51 | 2.158942e-48 |
| MsG0780041783.01 | MsG0880047436.01 | 0.812913 | 3.336653e-51 | 2.148159e-48 |
| MsG0280011281.01 | MsG0880047436.01 | 0.827534 | 1.483691e-54 | 1.436305e-51 |
| MsG0280011475.01 | MsG0880047436.01 | 0.806777 | 6.977165e-50 | 3.819998e-47 |
| MsG0380012148.01 | MsG0880047436.01 | 0.801246 | 9.856598e-49 | 4.684512e-46 |
| MsG0380012157.01 | MsG0880047436.01 | 0.806368 | 8.510595e-50 | 4.610986e-47 |
| MsG0380014231.01 | MsG0880047436.01 | 0.835675 | 1.461357e-56 | 1.799809e-53 |
| MsG0380014642.01 | MsG0880047436.01 | 0.809813 | 1.572071e-50 | 9.322402e-48 |
| MsG0380014735.01 | MsG0880047436.01 | 0.823135 | 1.630397e-53 | 1.391957e-50 |
| MsG0680030875.01 | MsG0880047436.01 | 0.814777 | 1.296290e-51 | 8.777660e-49 |
| MsG0680031204.01 | MsG0880047436.01 | 0.807226 | 5.605713e-50 | 3.105133e-47 |
| MsG0680035584.01 | MsG0880047436.01 | 0.816198 | 6.258864e-52 | 4.406008e-49 |
| MsG0480019183.01 | MsG0880047436.01 | 0.809314 | 2.011415e-50 | 1.177068e-47 |
| MsG0480019376.01 | MsG0880047436.01 | 0.819424 | 1.169890e-52 | 8.999266e-50 |
| MsG0480019861.01 | MsG0880047436.01 | 0.822290 | 2.564207e-53 | 2.137284e-50 |
| MsG0480022591.01 | MsG0880047436.01 | 0.815902 | 7.285061e-52 | 5.086732e-49 |
| MsG0480023103.01 | MsG0880047436.01 | 0.802512 | 5.417212e-49 | 2.658552e-46 |
| MsG0480023152.01 | MsG0880047436.01 | 0.815981 | 6.998002e-52 | 4.897039e-49 |
| MsG0480023386.01 | MsG0880047436.01 | 0.803328 | 3.673557e-49 | 1.840783e-46 |
| MsG0480023695.01 | MsG0880047436.01 | 0.800996 | 1.108719e-48 | 5.236575e-46 |
| MsG0580024309.01 | MsG0880047436.01 | 0.801661 | 8.103380e-49 | 3.891654e-46 |
| MsG0580024493.01 | MsG0880047436.01 | 0.829621 | 4.645883e-55 | 4.780470e-52 |
| MsG0580024688.01 | MsG0880047436.01 | 0.808026 | 3.791058e-50 | 2.144221e-47 |
| MsG0380015271.01 | MsG0880047436.01 | 0.802362 | 5.817228e-49 | 2.844197e-46 |
| MsG0380015619.01 | MsG0880047436.01 | 0.801690 | 7.993043e-49 | 3.841473e-46 |
| MsG0380015752.01 | MsG0880047436.01 | 0.800205 | 1.607468e-48 | 7.440649e-46 |
| MsG0380016166.01 | MsG0880047436.01 | 0.819111 | 1.378549e-52 | 1.051265e-49 |
| MsG0380016456.01 | MsG0880047436.01 | 0.826004 | 3.440973e-54 | 3.187474e-51 |
| MsG0380017405.01 | MsG0880047436.01 | 0.800122 | 1.671403e-48 | 7.720314e-46 |
| MsG0380017812.01 | MsG0880047436.01 | 0.810950 | 8.934501e-51 | 5.460238e-48 |
| MsG0380017962.01 | MsG0880047436.01 | 0.812921 | 3.324421e-51 | 2.140683e-48 |
| MsG0580026362.01 | MsG0880047436.01 | 0.824438 | 8.070810e-54 | 7.148619e-51 |
| MsG0580027276.01 | MsG0880047436.01 | 0.825988 | 3.470898e-54 | 3.213775e-51 |
| MsG0580028159.01 | MsG0880047436.01 | 0.812353 | 4.425163e-51 | 2.807279e-48 |
| MsG0580029177.01 | MsG0880047436.01 | 0.813085 | 3.060027e-51 | 1.979099e-48 |
| MsG0580029792.01 | MsG0880047436.01 | 0.803733 | 3.027608e-49 | 1.533045e-46 |
| MsG0680030658.01 | MsG0880047436.01 | 0.806977 | 6.327935e-50 | 3.482587e-47 |
| MsG0280006534.01 | MsG0880047436.01 | 0.812968 | 3.246263e-51 | 2.092960e-48 |
| MsG0280006973.01 | MsG0880047436.01 | 0.820135 | 8.050462e-53 | 6.317208e-50 |
| MsG0280007017.01 | MsG0880047436.01 | 0.806416 | 8.314788e-50 | 4.510385e-47 |
| MsG0280007288.01 | MsG0880047436.01 | 0.826697 | 2.352681e-54 | 2.222718e-51 |
| MsG0280007291.01 | MsG0880047436.01 | 0.808373 | 3.197618e-50 | 1.825262e-47 |
| MsG0280008328.01 | MsG0880047436.01 | -0.807949 | 3.936768e-50 | 2.222105e-47 |
| MsG0280009079.01 | MsG0880047436.01 | 0.806531 | 7.862456e-50 | 4.277634e-47 |
| MsG0280009094.01 | MsG0880047436.01 | 0.815371 | 9.567127e-52 | 6.583978e-49 |
| MsG0280009742.01 | MsG0880047436.01 | 0.804902 | 1.728683e-49 | 9.021390e-47 |
| MsG0280009864.01 | MsG0880047436.01 | 0.821673 | 3.563613e-53 | 2.918421e-50 |
| MsG0680035870.01 | MsG0880047436.01 | 0.836620 | 8.408387e-57 | 1.065354e-53 |
| MsG0780035994.01 | MsG0880047436.01 | 0.820291 | 7.412639e-53 | 5.841310e-50 |
| MsG0780037458.01 | MsG0880047436.01 | 0.801122 | 1.044781e-48 | 4.950093e-46 |
| MsG0780037698.01 | MsG0880047436.01 | 0.808831 | 2.553022e-50 | 1.474784e-47 |
| MsG0780038573.01 | MsG0880047436.01 | 0.811966 | 5.374462e-51 | 3.373712e-48 |
| MsG0780039704.01 | MsG0880047436.01 | 0.820987 | 5.130037e-53 | 4.121955e-50 |
| MsG0780039836.01 | MsG0880047436.01 | 0.809984 | 1.444301e-50 | 8.603413e-48 |
| MsG0780039839.01 | MsG0880047436.01 | 0.803917 | 2.772266e-49 | 1.410493e-46 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880047436.01.T01 | MTR_4g127440 | 76.106 | 226 | 22 | 2 | 136 | 333 | 280 | 501 | 2.00e-101 | 310 |
| MsG0880047436.01.T01 | MTR_4g127440 | 56.250 | 128 | 39 | 3 | 1 | 127 | 1 | 112 | 4.38e-30 | 120 |
| MsG0880047436.01.T01 | MTR_2g037980 | 58.974 | 234 | 54 | 4 | 136 | 332 | 279 | 507 | 8.00e-67 | 221 |
| MsG0880047436.01.T01 | MTR_2g037980 | 45.395 | 152 | 36 | 3 | 1 | 136 | 1 | 121 | 4.60e-26 | 109 |
| MsG0880047436.01.T01 | MTR_4g115420 | 34.529 | 223 | 102 | 8 | 141 | 332 | 269 | 478 | 1.56e-18 | 87.0 |
| MsG0880047436.01.T01 | MTR_4g115420 | 37.956 | 137 | 48 | 4 | 2 | 127 | 4 | 114 | 1.65e-14 | 74.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880047436.01.T01 | AT4G25940 | 46.964 | 247 | 72 | 10 | 136 | 332 | 286 | 523 | 6.38e-48 | 170 |
| MsG0880047436.01.T01 | AT4G25940 | 40.945 | 127 | 60 | 2 | 1 | 127 | 1 | 112 | 5.86e-18 | 85.5 |
| MsG0880047436.01.T01 | AT5G57200 | 44.980 | 249 | 76 | 8 | 136 | 332 | 278 | 517 | 3.30e-45 | 163 |
| MsG0880047436.01.T01 | AT5G57200 | 46.457 | 127 | 53 | 2 | 1 | 127 | 1 | 112 | 1.82e-22 | 98.6 |
| MsG0880047436.01.T01 | AT5G35200 | 37.327 | 217 | 109 | 9 | 134 | 332 | 270 | 477 | 9.35e-27 | 111 |
| MsG0880047436.01.T01 | AT5G35200 | 34.559 | 136 | 42 | 3 | 8 | 127 | 12 | 116 | 2.16e-12 | 68.6 |
| MsG0880047436.01.T01 | AT5G35200 | 37.327 | 217 | 109 | 9 | 134 | 332 | 270 | 477 | 9.35e-27 | 111 |
| MsG0880047436.01.T01 | AT5G35200 | 34.559 | 136 | 42 | 3 | 8 | 127 | 12 | 116 | 2.16e-12 | 68.6 |
| MsG0880047436.01.T01 | AT2G01600 | 40.789 | 152 | 43 | 3 | 1 | 136 | 1 | 121 | 1.25e-23 | 102 |
| MsG0880047436.01.T01 | AT2G01600 | 36.404 | 228 | 100 | 9 | 136 | 332 | 279 | 492 | 2.31e-23 | 101 |
| MsG0880047436.01.T01 | AT1G14910 | 33.761 | 234 | 104 | 9 | 134 | 332 | 277 | 494 | 3.27e-23 | 101 |
| MsG0880047436.01.T01 | AT1G14910 | 38.158 | 152 | 47 | 3 | 1 | 136 | 1 | 121 | 7.80e-23 | 100 |
| MsG0880047436.01.T01 | AT1G14910 | 33.761 | 234 | 104 | 9 | 134 | 332 | 272 | 489 | 3.42e-23 | 100 |
| MsG0880047436.01.T01 | AT1G14910 | 38.158 | 152 | 47 | 3 | 1 | 136 | 1 | 121 | 7.69e-23 | 100 |
Find 102 sgRNAs with CRISPR-Local
Find 228 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCTCTAGTTCTTGAGCTTT+TGG | 0.164263 | 8:-86293442 | None:intergenic |
| CATATCCATAACCTGCATTT+TGG | 0.171662 | 8:-86294201 | None:intergenic |
| GGACCACAATCATGTCTTTA+TGG | 0.216412 | 8:-86291572 | None:intergenic |
| CAAAATGCAGGTTATGGATA+TGG | 0.219437 | 8:+86294202 | MsG0880047436.01.T01:CDS |
| AATCCCATTTGTACGTTAGA+TGG | 0.251492 | 8:-86294300 | None:intergenic |
| ATATGCTGGTTCACCTTTGC+AGG | 0.260042 | 8:+86293402 | MsG0880047436.01.T01:CDS |
| CGTAGGCCTTTCTCCATGTT+TGG | 0.285097 | 8:-86290572 | None:intergenic |
| CTTGCTTTGACTGATATAAC+TGG | 0.327035 | 8:+86293752 | MsG0880047436.01.T01:CDS |
| CAAAGAACCTGTCTCAAAAC+TGG | 0.336881 | 8:-86292754 | None:intergenic |
| GGAACATCATTTGCTGTTGC+TGG | 0.351614 | 8:-86294346 | None:intergenic |
| CAACTCCAAAATGCAGGTTA+TGG | 0.355009 | 8:+86294196 | MsG0880047436.01.T01:CDS |
| CTTCGAACGTGACGTTCCTT+AGG | 0.359965 | 8:-86290851 | None:intergenic |
| CGCTCCATCTAACGTACAAA+TGG | 0.366100 | 8:+86294296 | MsG0880047436.01.T01:CDS |
| CCATCATTGTGTTGTGTTGT+TGG | 0.367456 | 8:-86294367 | None:intergenic |
| CCTGTACCTAGCTATTCTTA+TGG | 0.378000 | 8:+86294476 | MsG0880047436.01.T01:three_prime_UTR |
| TATTGTTTGTTATTTGAAGC+AGG | 0.396281 | 8:+86294558 | MsG0880047436.01.T01:three_prime_UTR |
| CTTGGCTAGGCCAACCTTTG+TGG | 0.410064 | 8:-86290610 | None:intergenic |
| AAAATGCAGGTTATGGATAT+GGG | 0.415543 | 8:+86294203 | MsG0880047436.01.T01:CDS |
| TGTTGAGGGTAATGAGTATA+TGG | 0.423576 | 8:-86294410 | None:intergenic |
| ATTATATTGTAGCTCCTTGG+TGG | 0.437626 | 8:-86294508 | None:intergenic |
| TCCATTGTGGCAACAAAAGA+AGG | 0.438298 | 8:-86292853 | None:intergenic |
| GCTTGGCGGGTGTGGTTGCT+TGG | 0.456794 | 8:-86293809 | None:intergenic |
| TACATTAATGTAACATCGAC+AGG | 0.456970 | 8:-86294597 | None:intergenic |
| CACCTCTTCTCAATATCCTA+TGG | 0.458524 | 8:-86291593 | None:intergenic |
| TACATTATATTGTAGCTCCT+TGG | 0.463879 | 8:-86294511 | None:intergenic |
| TGTAGCTCCTTGGTGGGGCA+TGG | 0.467583 | 8:-86294501 | None:intergenic |
| TTGTTAGAAAATAAATATGC+TGG | 0.468104 | 8:+86293388 | MsG0880047436.01.T01:intron |
| GGAGGAAGAACCTGTTGAAA+AGG | 0.487082 | 8:+86293246 | MsG0880047436.01.T01:intron |
| TATGGCTGCTGCTGCTGGTA+AGG | 0.487312 | 8:-86294392 | None:intergenic |
| GAGTATATGGCTGCTGCTGC+TGG | 0.488868 | 8:-86294397 | None:intergenic |
| TACCAAGCTCTTAACACTGC+CGG | 0.491863 | 8:-86292905 | None:intergenic |
| ACGTTATTCGATACTGCAAA+TGG | 0.496974 | 8:-86294271 | None:intergenic |
| AACAAGTGCAAGTTCCCAAC+CGG | 0.499520 | 8:-86293780 | None:intergenic |
| CTTAAAGATTCCACAAAGGT+TGG | 0.501161 | 8:+86290600 | MsG0880047436.01.T01:CDS |
| ACAGGTAAAGGATCTGCAAA+TGG | 0.505096 | 8:-86294458 | None:intergenic |
| GATCTGACGCTTGGCGGGTG+TGG | 0.507629 | 8:-86293817 | None:intergenic |
| ATCCGGCAGTGTTAAGAGCT+TGG | 0.509275 | 8:+86292903 | MsG0880047436.01.T01:CDS |
| CTTGTATTCGCTATTGACCT+TGG | 0.509420 | 8:-86290628 | None:intergenic |
| TAGATTTCAGTCTCTAAGAA+AGG | 0.510328 | 8:+86294532 | MsG0880047436.01.T01:three_prime_UTR |
| ACTAGAGGATAGCAATGCTT+TGG | 0.510779 | 8:+86293456 | MsG0880047436.01.T01:CDS |
| ATTGTTTGTTATTTGAAGCA+GGG | 0.513226 | 8:+86294559 | MsG0880047436.01.T01:three_prime_UTR |
| CCATAAGAATAGCTAGGTAC+AGG | 0.520449 | 8:-86294476 | None:intergenic |
| CGAACGTGACGTTCCTTAGG+TGG | 0.523533 | 8:-86290848 | None:intergenic |
| GCGGGTGTGGTTGCTTGGCG+TGG | 0.527690 | 8:-86293804 | None:intergenic |
| TTATATTGTAGCTCCTTGGT+GGG | 0.531489 | 8:-86294507 | None:intergenic |
| GAATAGCTAGGTACAGGTAA+AGG | 0.532228 | 8:-86294470 | None:intergenic |
| TAACATCGACAGGCAAGACT+TGG | 0.533929 | 8:-86294587 | None:intergenic |
| CAATTTCAACTCCAAAATGC+AGG | 0.534331 | 8:+86294190 | MsG0880047436.01.T01:CDS |
| ATTCGCTATTGACCTTGGCT+AGG | 0.534898 | 8:-86290623 | None:intergenic |
| CAAGGTCAATAGCGAATACA+AGG | 0.535569 | 8:+86290629 | MsG0880047436.01.T01:CDS |
| CCTCCTTTGATATTGACTGA+TGG | 0.535897 | 8:+86293292 | MsG0880047436.01.T01:CDS |
| AAAGAATTAGCACCTACATC+CGG | 0.539766 | 8:+86292886 | MsG0880047436.01.T01:CDS |
| CTCTTAACACTGCCGGATGT+AGG | 0.539870 | 8:-86292898 | None:intergenic |
| AACGTTCCAAACATGGAGAA+AGG | 0.540341 | 8:+86290566 | MsG0880047436.01.T01:CDS |
| AAGATACATCTGTCCTTGGT+TGG | 0.540758 | 8:-86291153 | None:intergenic |
| GAATGGGAACGTTCCAAACA+TGG | 0.543086 | 8:+86290559 | None:intergenic |
| CAGTAAGATACATCTGTCCT+TGG | 0.544316 | 8:-86291157 | None:intergenic |
| CGCATAACTGACATCTGTTG+AGG | 0.547138 | 8:-86294425 | None:intergenic |
| AAGACATGATTGTGGTCCAT+AGG | 0.548537 | 8:+86291577 | MsG0880047436.01.T01:CDS |
| TATAACTGGAACTACCGGTT+GGG | 0.551154 | 8:+86293766 | MsG0880047436.01.T01:CDS |
| ACTGATATAACTGGAACTAC+CGG | 0.551332 | 8:+86293761 | MsG0880047436.01.T01:CDS |
| GCTCCATCTAACGTACAAAT+GGG | 0.552466 | 8:+86294297 | MsG0880047436.01.T01:CDS |
| CCAACAACACAACACAATGA+TGG | 0.562567 | 8:+86294367 | MsG0880047436.01.T01:three_prime_UTR |
| ATATAACTGGAACTACCGGT+TGG | 0.562685 | 8:+86293765 | MsG0880047436.01.T01:CDS |
| GGAAATTGAAAATTTCTGCA+AGG | 0.566283 | 8:-86292733 | None:intergenic |
| TTTAATGTATTCTTCCATTG+TGG | 0.566798 | 8:-86292866 | None:intergenic |
| CTGATTTCTATGATACTGCA+AGG | 0.568538 | 8:+86292703 | MsG0880047436.01.T01:CDS |
| TAACCATCAGTCAATATCAA+AGG | 0.572753 | 8:-86293295 | None:intergenic |
| GCATAACTGACATCTGTTGA+GGG | 0.576695 | 8:-86294424 | None:intergenic |
| CTTATGTTGAGTCAGGCTGG+TGG | 0.578694 | 8:+86294115 | MsG0880047436.01.T01:intron |
| TCCAAAAGCTCAAGAACTAG+AGG | 0.581217 | 8:+86293441 | MsG0880047436.01.T01:CDS |
| TATGCTGGTTCACCTTTGCA+GGG | 0.582001 | 8:+86293403 | MsG0880047436.01.T01:CDS |
| TGTGGCAACAAAAGAAGGTG+GGG | 0.587591 | 8:-86292848 | None:intergenic |
| AAATGCAGGTTATGGATATG+GGG | 0.588854 | 8:+86294204 | MsG0880047436.01.T01:CDS |
| TGATTTCTATGATACTGCAA+GGG | 0.593160 | 8:+86292704 | MsG0880047436.01.T01:CDS |
| TCACGTAGAATATCCACCTA+AGG | 0.594813 | 8:+86290835 | MsG0880047436.01.T01:CDS |
| CACAAAGGTTGGCCTAGCCA+AGG | 0.595430 | 8:+86290611 | MsG0880047436.01.T01:CDS |
| TTGTGGCAACAAAAGAAGGT+GGG | 0.596753 | 8:-86292849 | None:intergenic |
| GCACTTGCAATCATACCACC+TGG | 0.601842 | 8:+86293478 | MsG0880047436.01.T01:CDS |
| TATATTGTAGCTCCTTGGTG+GGG | 0.602349 | 8:-86294506 | None:intergenic |
| TGCTGATTATAACTATTGAA+CGG | 0.604102 | 8:-86294244 | None:intergenic |
| GGAATCTTTAAGAGCTCCGT+AGG | 0.604329 | 8:-86290589 | None:intergenic |
| ATGGAGCCATAAGAATAGCT+AGG | 0.606959 | 8:-86294482 | None:intergenic |
| ATTTCACTTAGACCCTGCAA+AGG | 0.611020 | 8:-86293415 | None:intergenic |
| CCATCAGTCAATATCAAAGG+AGG | 0.615938 | 8:-86293292 | None:intergenic |
| TGTATGAAGATGAAAATGCA+AGG | 0.616696 | 8:+86294164 | MsG0880047436.01.T01:CDS |
| ATTGTGGCAACAAAAGAAGG+TGG | 0.618199 | 8:-86292850 | None:intergenic |
| TAATGTAGGTTTATGTACAC+CGG | 0.621747 | 8:+86291244 | MsG0880047436.01.T01:intron |
| AATTATGTCAAATTCACCGC+CGG | 0.625927 | 8:-86291263 | None:intergenic |
| CTACATCAGCTCACCAACCA+AGG | 0.628734 | 8:+86291140 | MsG0880047436.01.T01:CDS |
| TATGGCTCCATGCCCCACCA+AGG | 0.636441 | 8:+86294494 | MsG0880047436.01.T01:three_prime_UTR |
| TGAAAAGGAACAAACAGAGA+AGG | 0.638172 | 8:+86293261 | MsG0880047436.01.T01:CDS |
| GTCCATAGGATATTGAGAAG+AGG | 0.638710 | 8:+86291591 | MsG0880047436.01.T01:CDS |
| CCAAGCGTCAGATCAAAACA+TGG | 0.646274 | 8:+86293826 | MsG0880047436.01.T01:CDS |
| GTGGCAACAAAAGAAGGTGG+GGG | 0.646684 | 8:-86292847 | None:intergenic |
| AATGCAGGTTATGGATATGG+GGG | 0.651296 | 8:+86294205 | MsG0880047436.01.T01:CDS |
| CAAACATGGAGAAAGGCCTA+CGG | 0.670628 | 8:+86290573 | MsG0880047436.01.T01:CDS |
| TTGCCATAAAGACATGATTG+TGG | 0.684013 | 8:+86291569 | MsG0880047436.01.T01:CDS |
| TGTAGGTTTATGTACACCGG+CGG | 0.690341 | 8:+86291247 | MsG0880047436.01.T01:intron |
| ATCTAGGCCTTACCACCAGG+TGG | 0.699605 | 8:-86293493 | None:intergenic |
| AGCTCTTAAAGATTCCACAA+AGG | 0.721390 | 8:+86290596 | MsG0880047436.01.T01:CDS |
| CTTGCAATCATACCACCTGG+TGG | 0.732489 | 8:+86293481 | MsG0880047436.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATAAAAATGTGAATATT+GGG | - | Chr8:86290729-86290748 | None:intergenic | 10.0% |
| !! | CAATTAATTAAATGTTAATA+TGG | - | Chr8:86292176-86292195 | None:intergenic | 10.0% |
| !! | AGAAATAATTAACACAATAT+TGG | - | Chr8:86291087-86291106 | None:intergenic | 15.0% |
| !! | ATAAGTTTAATATTCCAATT+TGG | - | Chr8:86291056-86291075 | None:intergenic | 15.0% |
| !! | ATATTTGAAAAATTTCTTGA+TGG | + | Chr8:86290939-86290958 | MsG0880047436.01.T01:intron | 15.0% |
| !! | GAAAATAAAAATGTGAATAT+TGG | - | Chr8:86290730-86290749 | None:intergenic | 15.0% |
| !! | TAAGCATAAATATAATCAAT+TGG | - | Chr8:86292638-86292657 | None:intergenic | 15.0% |
| !! | TTATAAGAAAAAGTTAGATT+TGG | + | Chr8:86292108-86292127 | MsG0880047436.01.T01:intron | 15.0% |
| !!! | TCAAGAAATTTTTCAAATAT+TGG | - | Chr8:86290939-86290958 | None:intergenic | 15.0% |
| !!! | TTTTTTCATTTTGTTATCAT+AGG | + | Chr8:86290781-86290800 | MsG0880047436.01.T01:intron | 15.0% |
| !! | AAGTAAGAAAATCTTAGAAT+TGG | - | Chr8:86293708-86293727 | None:intergenic | 20.0% |
| !! | AATCAACTATCATATAATCT+AGG | - | Chr8:86293512-86293531 | None:intergenic | 20.0% |
| !! | AATGAATGACAATACAATAT+AGG | + | Chr8:86291029-86291048 | MsG0880047436.01.T01:intron | 20.0% |
| !! | AATGTACATGTATGTTAATA+AGG | + | Chr8:86293120-86293139 | MsG0880047436.01.T01:intron | 20.0% |
| !! | AATTACAAAATATGCTTGTT+TGG | + | Chr8:86293635-86293654 | MsG0880047436.01.T01:intron | 20.0% |
| !! | ACTTTGGTTATAAACTTATA+TGG | + | Chr8:86293336-86293355 | MsG0880047436.01.T01:intron | 20.0% |
| !! | ATGAATGACAATACAATATA+GGG | + | Chr8:86291030-86291049 | MsG0880047436.01.T01:intron | 20.0% |
| !! | ATTTCAAACATATACTAGTT+TGG | + | Chr8:86291355-86291374 | MsG0880047436.01.T01:intron | 20.0% |
| !! | GGAAAATTAACAAACATAAT+AGG | - | Chr8:86290981-86291000 | None:intergenic | 20.0% |
| !! | GTTATAAACTTATATGGTAA+TGG | + | Chr8:86293342-86293361 | MsG0880047436.01.T01:intron | 20.0% |
| !! | TATTAACATACATGTACATT+GGG | - | Chr8:86293120-86293139 | None:intergenic | 20.0% |
| !! | TTAACTGAATAATGAAATAC+AGG | + | Chr8:86291546-86291565 | MsG0880047436.01.T01:intron | 20.0% |
| !! | TTATTAACATACATGTACAT+TGG | - | Chr8:86293121-86293140 | None:intergenic | 20.0% |
| !! | TTCATTTGAATGAATAAAGA+AGG | - | Chr8:86290752-86290771 | None:intergenic | 20.0% |
| !! | TTGTTAGAAAATAAATATGC+TGG | + | Chr8:86293388-86293407 | MsG0880047436.01.T01:intron | 20.0% |
| !! | TTTGCATATATATAAAAAGC+TGG | + | Chr8:86292566-86292585 | MsG0880047436.01.T01:intron | 20.0% |
| !!! | AAATTTTGTCAAAATTACAG+TGG | - | Chr8:86291297-86291316 | None:intergenic | 20.0% |
| !!! | AAGATTTTCTTACTTTATGT+AGG | + | Chr8:86293713-86293732 | MsG0880047436.01.T01:intron | 20.0% |
| !!! | ATATATATGCAAAGCATTTA+TGG | - | Chr8:86292559-86292578 | None:intergenic | 20.0% |
| !!! | TAACAATACTTTTTCTTGTA+TGG | + | Chr8:86292351-86292370 | MsG0880047436.01.T01:intron | 20.0% |
| ! | AAACTACAATATTCATACCA+AGG | - | Chr8:86292260-86292279 | None:intergenic | 25.0% |
| ! | AACCTACATTAAGTATGAAA+AGG | - | Chr8:86291235-86291254 | None:intergenic | 25.0% |
| ! | AAGCATGGTTAAATAAATGA+TGG | - | Chr8:86293665-86293684 | None:intergenic | 25.0% |
| ! | ATTATCTAATCAGTATGCAT+TGG | + | Chr8:86292234-86292253 | MsG0880047436.01.T01:intron | 25.0% |
| ! | TGGAAAGATGAAATTGAAAT+AGG | - | Chr8:86290919-86290938 | None:intergenic | 25.0% |
| ! | TTTAATGTATTCTTCCATTG+TGG | - | Chr8:86292869-86292888 | None:intergenic | 25.0% |
| !! | AATGATGGAATCATAAAACT+TGG | + | Chr8:86292422-86292441 | MsG0880047436.01.T01:intron | 25.0% |
| !! | ATAGAATATTTCTGCAAAGA+AGG | - | Chr8:86291119-86291138 | None:intergenic | 25.0% |
| !! | ATGATGGAATCATAAAACTT+GGG | + | Chr8:86292423-86292442 | MsG0880047436.01.T01:intron | 25.0% |
| !! | CAAGTCTTTCTTCTAAAAAA+TGG | - | Chr8:86291821-86291840 | None:intergenic | 25.0% |
| !! | CTAGTATATGTTTGAAATCA+CGG | - | Chr8:86291353-86291372 | None:intergenic | 25.0% |
| !! | TAGAATATTTCTGCAAAGAA+GGG | - | Chr8:86291118-86291137 | None:intergenic | 25.0% |
| !! | TGCTGATTATAACTATTGAA+CGG | - | Chr8:86294247-86294266 | None:intergenic | 25.0% |
| !! | TTGGGCTAGAAAATAAAAAT+TGG | - | Chr8:86290711-86290730 | None:intergenic | 25.0% |
| !! | TTTTATGATTCCATCATTGA+GGG | - | Chr8:86292420-86292439 | None:intergenic | 25.0% |
| !! | TTTTCGTATTAAGTTCAATG+AGG | + | Chr8:86294037-86294056 | MsG0880047436.01.T01:intron | 25.0% |
| !! | TTTTGTAATTATTGAGCATC+CGG | - | Chr8:86293625-86293644 | None:intergenic | 25.0% |
| !!! | AGGTAAATTACTTGGTTTTA+TGG | + | Chr8:86291702-86291721 | MsG0880047436.01.T01:intron | 25.0% |
| !!! | ATAAGGTCATTTTTAACATC+AGG | + | Chr8:86293137-86293156 | MsG0880047436.01.T01:intron | 25.0% |
| !!! | ATTATTTTTGCTATGTATGC+AGG | + | Chr8:86292668-86292687 | MsG0880047436.01.T01:intron | 25.0% |
| !!! | ATTGTTTGTTATTTGAAGCA+GGG | + | Chr8:86294559-86294578 | MsG0880047436.01.T01:three_prime_UTR | 25.0% |
| !!! | CATTTTGTTATCATAGGAAT+TGG | + | Chr8:86290787-86290806 | MsG0880047436.01.T01:intron | 25.0% |
| !!! | TATTGTTTGTTATTTGAAGC+AGG | + | Chr8:86294558-86294577 | MsG0880047436.01.T01:three_prime_UTR | 25.0% |
| AAAATGCAGGTTATGGATAT+GGG | + | Chr8:86294203-86294222 | MsG0880047436.01.T01:CDS | 30.0% | |
| AAAATTTCTTGATGGAGCAT+TGG | + | Chr8:86290947-86290966 | MsG0880047436.01.T01:intron | 30.0% | |
| AAACATCATTATGAACCTGT+TGG | - | Chr8:86292592-86292611 | None:intergenic | 30.0% | |
| AAACCAAGTAATTTACCTAG+AGG | - | Chr8:86291700-86291719 | None:intergenic | 30.0% | |
| AAATATTACACGAAGAATGC+AGG | - | Chr8:86291501-86291520 | None:intergenic | 30.0% | |
| AACATCAATGTTCTCATTAC+AGG | - | Chr8:86294082-86294101 | None:intergenic | 30.0% | |
| AACCAAGTAATTTACCTAGA+GGG | - | Chr8:86291699-86291718 | None:intergenic | 30.0% | |
| AAGGACTTACTATCCAATTT+CGG | - | Chr8:86291216-86291235 | None:intergenic | 30.0% | |
| AATACAATATAGGGCCAAAT+TGG | + | Chr8:86291039-86291058 | MsG0880047436.01.T01:intron | 30.0% | |
| AATATAGTTTCCCTCAATGA+TGG | + | Chr8:86292407-86292426 | MsG0880047436.01.T01:intron | 30.0% | |
| AATTGTAATCTCAATCACAC+AGG | - | Chr8:86293564-86293583 | None:intergenic | 30.0% | |
| ATAGCGTGTGATTAAAATTG+AGG | - | Chr8:86291927-86291946 | None:intergenic | 30.0% | |
| ATTGTAATCTCAATCACACA+GGG | - | Chr8:86293563-86293582 | None:intergenic | 30.0% | |
| GAAATTCATTATCTAGTCTC+CGG | + | Chr8:86293603-86293622 | MsG0880047436.01.T01:intron | 30.0% | |
| GCTTTCATGTTTGTGAAATT+TGG | + | Chr8:86293364-86293383 | MsG0880047436.01.T01:intron | 30.0% | |
| GGAAATTGAAAATTTCTGCA+AGG | - | Chr8:86292736-86292755 | None:intergenic | 30.0% | |
| TAACCATCAGTCAATATCAA+AGG | - | Chr8:86293298-86293317 | None:intergenic | 30.0% | |
| TAATGTAGGTTTATGTACAC+CGG | + | Chr8:86291244-86291263 | MsG0880047436.01.T01:intron | 30.0% | |
| TACATTATATTGTAGCTCCT+TGG | - | Chr8:86294514-86294533 | None:intergenic | 30.0% | |
| TAGCGTGTGATTAAAATTGA+GGG | - | Chr8:86291926-86291945 | None:intergenic | 30.0% | |
| TGAAATGCAGTTCTTTGATA+TGG | + | Chr8:86292521-86292540 | MsG0880047436.01.T01:intron | 30.0% | |
| TGATTTCTATGATACTGCAA+GGG | + | Chr8:86292704-86292723 | MsG0880047436.01.T01:CDS | 30.0% | |
| TGTATGAAGATGAAAATGCA+AGG | + | Chr8:86294164-86294183 | MsG0880047436.01.T01:CDS | 30.0% | |
| TGTTCTCATTACAGGTTTAA+AGG | - | Chr8:86294074-86294093 | None:intergenic | 30.0% | |
| TTTAATATATTGCAGCCTGA+AGG | + | Chr8:86292197-86292216 | MsG0880047436.01.T01:intron | 30.0% | |
| ! | CTCTTAGTTTCTTTTTCTTC+TGG | - | Chr8:86293193-86293212 | None:intergenic | 30.0% |
| ! | CTTTAAAAGTCTCTTGGAAA+GGG | - | Chr8:86291191-86291210 | None:intergenic | 30.0% |
| ! | GTCCTTTTCATACTTAATGT+AGG | + | Chr8:86291230-86291249 | MsG0880047436.01.T01:intron | 30.0% |
| ! | GTTTTATGATTCCATCATTG+AGG | - | Chr8:86292421-86292440 | None:intergenic | 30.0% |
| ! | TAGATTTCAGTCTCTAAGAA+AGG | + | Chr8:86294532-86294551 | MsG0880047436.01.T01:three_prime_UTR | 30.0% |
| ! | TCTTCTAAAAAATGGTGCAT+AGG | - | Chr8:86291813-86291832 | None:intergenic | 30.0% |
| ! | TCTTTAAAAGTCTCTTGGAA+AGG | - | Chr8:86291192-86291211 | None:intergenic | 30.0% |
| !! | AGAAGTATACGCTTTTATAG+CGG | + | Chr8:86293533-86293552 | MsG0880047436.01.T01:intron | 30.0% |
| !! | TGTGATTTTCTGGTATACTT+TGG | + | Chr8:86293320-86293339 | MsG0880047436.01.T01:intron | 30.0% |
| !!! | TTTTCTTCTGGTTCTTCTTT+CGG | - | Chr8:86293181-86293200 | None:intergenic | 30.0% |
| AAAGAATTAGCACCTACATC+CGG | + | Chr8:86292886-86292905 | MsG0880047436.01.T01:CDS | 35.0% | |
| AAATGCAGGTTATGGATATG+GGG | + | Chr8:86294204-86294223 | MsG0880047436.01.T01:CDS | 35.0% | |
| AACCCTCTAGGTAAATTACT+TGG | + | Chr8:86291694-86291713 | MsG0880047436.01.T01:intron | 35.0% | |
| AAGTACACACTTAGTTGAAG+CGG | - | Chr8:86291901-86291920 | None:intergenic | 35.0% | |
| AATCCCATTTGTACGTTAGA+TGG | - | Chr8:86294303-86294322 | None:intergenic | 35.0% | |
| AATTATGTCAAATTCACCGC+CGG | - | Chr8:86291266-86291285 | None:intergenic | 35.0% | |
| ACGTTATTCGATACTGCAAA+TGG | - | Chr8:86294274-86294293 | None:intergenic | 35.0% | |
| ACTGATATAACTGGAACTAC+CGG | + | Chr8:86293761-86293780 | MsG0880047436.01.T01:CDS | 35.0% | |
| AGCTCTTAAAGATTCCACAA+AGG | + | Chr8:86290596-86290615 | MsG0880047436.01.T01:CDS | 35.0% | |
| AGGACTTACTATCCAATTTC+GGG | - | Chr8:86291215-86291234 | None:intergenic | 35.0% | |
| AGTACATTCAAAATTCAGCG+AGG | - | Chr8:86292495-86292514 | None:intergenic | 35.0% | |
| ATACTTGACAGCAAACAAGT+CGG | - | Chr8:86292082-86292101 | None:intergenic | 35.0% | |
| ATTATATTGTAGCTCCTTGG+TGG | - | Chr8:86294511-86294530 | None:intergenic | 35.0% | |
| CAAAATGCAGGTTATGGATA+TGG | + | Chr8:86294202-86294221 | MsG0880047436.01.T01:CDS | 35.0% | |
| CAATTTCAACTCCAAAATGC+AGG | + | Chr8:86294190-86294209 | MsG0880047436.01.T01:CDS | 35.0% | |
| CCAAACAGAACTCTTTATGT+TGG | - | Chr8:86293904-86293923 | None:intergenic | 35.0% | |
| CCAACATAAAGAGTTCTGTT+TGG | + | Chr8:86293901-86293920 | MsG0880047436.01.T01:intron | 35.0% | |
| CTGATTTCTATGATACTGCA+AGG | + | Chr8:86292703-86292722 | MsG0880047436.01.T01:CDS | 35.0% | |
| CTTAAAGATTCCACAAAGGT+TGG | + | Chr8:86290600-86290619 | MsG0880047436.01.T01:CDS | 35.0% | |
| CTTGCTTTGACTGATATAAC+TGG | + | Chr8:86293752-86293771 | MsG0880047436.01.T01:CDS | 35.0% | |
| GAATCATAAAACTTGGGATG+TGG | + | Chr8:86292429-86292448 | MsG0880047436.01.T01:intron | 35.0% | |
| GTATCGAACAACAAAAAGCA+TGG | - | Chr8:86293680-86293699 | None:intergenic | 35.0% | |
| TATATAAAAAGCTGGCCAAC+AGG | + | Chr8:86292574-86292593 | MsG0880047436.01.T01:intron | 35.0% | |
| TGAAAAGGAACAAACAGAGA+AGG | + | Chr8:86293261-86293280 | MsG0880047436.01.T01:CDS | 35.0% | |
| TGTTGAGGGTAATGAGTATA+TGG | - | Chr8:86294413-86294432 | None:intergenic | 35.0% | |
| TTATATTGTAGCTCCTTGGT+GGG | - | Chr8:86294510-86294529 | None:intergenic | 35.0% | |
| TTGCCATAAAGACATGATTG+TGG | + | Chr8:86291569-86291588 | MsG0880047436.01.T01:CDS | 35.0% | |
| TTGTAATCTCAATCACACAG+GGG | - | Chr8:86293562-86293581 | None:intergenic | 35.0% | |
| ! | ATGTCAGAAAAGTGTAGGTA+AGG | + | Chr8:86291464-86291483 | MsG0880047436.01.T01:intron | 35.0% |
| ! | CATATCCATAACCTGCATTT+TGG | - | Chr8:86294204-86294223 | None:intergenic | 35.0% |
| ! | CATTTCTTTTCTTCTAACGC+AGG | - | Chr8:86291013-86291032 | None:intergenic | 35.0% |
| ! | GATGGTTAGATGTGATTTTC+TGG | + | Chr8:86293310-86293329 | MsG0880047436.01.T01:intron | 35.0% |
| ! | TACCTACACTTTTCTGACAT+AGG | - | Chr8:86291464-86291483 | None:intergenic | 35.0% |
| ! | TCTGTTTGTTCCTTTTCAAC+AGG | - | Chr8:86293259-86293278 | None:intergenic | 35.0% |
| !! | GACTTTTAAAGACCCGAAAT+TGG | + | Chr8:86291200-86291219 | MsG0880047436.01.T01:intron | 35.0% |
| !!! | TCAATTTCCAGTTTTGAGAC+AGG | + | Chr8:86292747-86292766 | MsG0880047436.01.T01:CDS | 35.0% |
| !!! | TTTTGAGACAGGTTCTTTGT+TGG | + | Chr8:86292758-86292777 | MsG0880047436.01.T01:intron | 35.0% |
| AACGTTCCAAACATGGAGAA+AGG | + | Chr8:86290566-86290585 | MsG0880047436.01.T01:CDS | 40.0% | |
| AAGACATGATTGTGGTCCAT+AGG | + | Chr8:86291577-86291596 | MsG0880047436.01.T01:CDS | 40.0% | |
| AAGATACATCTGTCCTTGGT+TGG | - | Chr8:86291156-86291175 | None:intergenic | 40.0% | |
| AAGCTGATAGGAAGCTGATT+AGG | - | Chr8:86291766-86291785 | None:intergenic | 40.0% | |
| AATCAGCTTCCTATCAGCTT+GGG | + | Chr8:86291766-86291785 | MsG0880047436.01.T01:intron | 40.0% | |
| AATGCAGGTTATGGATATGG+GGG | + | Chr8:86294205-86294224 | MsG0880047436.01.T01:CDS | 40.0% | |
| ACAGGTAAAGGATCTGCAAA+TGG | - | Chr8:86294461-86294480 | None:intergenic | 40.0% | |
| ACTAGAGGATAGCAATGCTT+TGG | + | Chr8:86293456-86293475 | MsG0880047436.01.T01:CDS | 40.0% | |
| ATATAACTGGAACTACCGGT+TGG | + | Chr8:86293765-86293784 | MsG0880047436.01.T01:CDS | 40.0% | |
| ATGGAGCCATAAGAATAGCT+AGG | - | Chr8:86294485-86294504 | None:intergenic | 40.0% | |
| ATTGTGGCAACAAAAGAAGG+TGG | - | Chr8:86292853-86292872 | None:intergenic | 40.0% | |
| ATTTCACTTAGACCCTGCAA+AGG | - | Chr8:86293418-86293437 | None:intergenic | 40.0% | |
| CAAAGAACCTGTCTCAAAAC+TGG | - | Chr8:86292757-86292776 | None:intergenic | 40.0% | |
| CAACTCCAAAATGCAGGTTA+TGG | + | Chr8:86294196-86294215 | MsG0880047436.01.T01:CDS | 40.0% | |
| CAAGGTCAATAGCGAATACA+AGG | + | Chr8:86290629-86290648 | MsG0880047436.01.T01:CDS | 40.0% | |
| CACCTCTTCTCAATATCCTA+TGG | - | Chr8:86291596-86291615 | None:intergenic | 40.0% | |
| CAGTAAGATACATCTGTCCT+TGG | - | Chr8:86291160-86291179 | None:intergenic | 40.0% | |
| CCAACAACACAACACAATGA+TGG | + | Chr8:86294367-86294386 | MsG0880047436.01.T01:three_prime_UTR | 40.0% | |
| CCATAAGAATAGCTAGGTAC+AGG | - | Chr8:86294479-86294498 | None:intergenic | 40.0% | |
| CCATCAGTCAATATCAAAGG+AGG | - | Chr8:86293295-86293314 | None:intergenic | 40.0% | |
| CCATCATTGTGTTGTGTTGT+TGG | - | Chr8:86294370-86294389 | None:intergenic | 40.0% | |
| CCTGTACCTAGCTATTCTTA+TGG | + | Chr8:86294476-86294495 | MsG0880047436.01.T01:three_prime_UTR | 40.0% | |
| CTAAGAGCCTGAAGTAATTG+AGG | + | Chr8:86293206-86293225 | MsG0880047436.01.T01:intron | 40.0% | |
| CTTCCTTCTTATGTTGAGTC+AGG | + | Chr8:86294108-86294127 | MsG0880047436.01.T01:intron | 40.0% | |
| CTTGTATTCGCTATTGACCT+TGG | - | Chr8:86290631-86290650 | None:intergenic | 40.0% | |
| GAACAAGCTGAAAATCAAGG+AGG | + | Chr8:86293228-86293247 | MsG0880047436.01.T01:intron | 40.0% | |
| GAATAGCTAGGTACAGGTAA+AGG | - | Chr8:86294473-86294492 | None:intergenic | 40.0% | |
| GAGGAACAAGCTGAAAATCA+AGG | + | Chr8:86293225-86293244 | MsG0880047436.01.T01:intron | 40.0% | |
| GCATAACTGACATCTGTTGA+GGG | - | Chr8:86294427-86294446 | None:intergenic | 40.0% | |
| GCTCCATCTAACGTACAAAT+GGG | + | Chr8:86294297-86294316 | MsG0880047436.01.T01:CDS | 40.0% | |
| GCTTGTTCCTCAATTACTTC+AGG | - | Chr8:86293216-86293235 | None:intergenic | 40.0% | |
| GGACCACAATCATGTCTTTA+TGG | - | Chr8:86291575-86291594 | None:intergenic | 40.0% | |
| GTCCATAGGATATTGAGAAG+AGG | + | Chr8:86291591-86291610 | MsG0880047436.01.T01:CDS | 40.0% | |
| TAATCAGCTTCCTATCAGCT+TGG | + | Chr8:86291765-86291784 | MsG0880047436.01.T01:intron | 40.0% | |
| TATATTGTAGCTCCTTGGTG+GGG | - | Chr8:86294509-86294528 | None:intergenic | 40.0% | |
| TCACGTAGAATATCCACCTA+AGG | + | Chr8:86290835-86290854 | MsG0880047436.01.T01:CDS | 40.0% | |
| TCCAAAAGCTCAAGAACTAG+AGG | + | Chr8:86293441-86293460 | MsG0880047436.01.T01:CDS | 40.0% | |
| TCCATTGTGGCAACAAAAGA+AGG | - | Chr8:86292856-86292875 | None:intergenic | 40.0% | |
| TGCGAATTCCAACTTCAAAG+AGG | + | Chr8:86291666-86291685 | MsG0880047436.01.T01:intron | 40.0% | |
| TTGTGGCAACAAAAGAAGGT+GGG | - | Chr8:86292852-86292871 | None:intergenic | 40.0% | |
| ! | ACCTTCTTTTGTTGCCACAA+TGG | + | Chr8:86292852-86292871 | MsG0880047436.01.T01:CDS | 40.0% |
| ! | CCTCCTTTGATATTGACTGA+TGG | + | Chr8:86293292-86293311 | MsG0880047436.01.T01:CDS | 40.0% |
| ! | TAATCAGTATGCATTGGCCT+TGG | + | Chr8:86292240-86292259 | MsG0880047436.01.T01:intron | 40.0% |
| ! | TATAACTGGAACTACCGGTT+GGG | + | Chr8:86293766-86293785 | MsG0880047436.01.T01:CDS | 40.0% |
| ! | TCGGGTCTTTAAAAGTCTCT+TGG | - | Chr8:86291197-86291216 | None:intergenic | 40.0% |
| ! | TGCCTATGTCAGAAAAGTGT+AGG | + | Chr8:86291459-86291478 | MsG0880047436.01.T01:intron | 40.0% |
| !! | AGTGTTGACTATGTAGCTGT+TGG | + | Chr8:86292024-86292043 | MsG0880047436.01.T01:intron | 40.0% |
| !! | GTTTGAGTCCTCTTTGAAGT+TGG | - | Chr8:86291677-86291696 | None:intergenic | 40.0% |
| !!! | TCCTCTAGTTCTTGAGCTTT+TGG | - | Chr8:86293445-86293464 | None:intergenic | 40.0% |
| AAAGAGGACTCAAACCCTCT+AGG | + | Chr8:86291682-86291701 | MsG0880047436.01.T01:intron | 45.0% | |
| AACAAGTGCAAGTTCCCAAC+CGG | - | Chr8:86293783-86293802 | None:intergenic | 45.0% | |
| AATCATACCACCTGGTGGTA+AGG | + | Chr8:86293486-86293505 | MsG0880047436.01.T01:intron | 45.0% | |
| AGCTTGGGATTGTTCTGCAT+GGG | + | Chr8:86291781-86291800 | MsG0880047436.01.T01:intron | 45.0% | |
| AGGTTATGGATATGGGGGAA+CGG | + | Chr8:86294210-86294229 | MsG0880047436.01.T01:CDS | 45.0% | |
| ATAATCTAGGCCTTACCACC+AGG | - | Chr8:86293499-86293518 | None:intergenic | 45.0% | |
| ATTCGCTATTGACCTTGGCT+AGG | - | Chr8:86290626-86290645 | None:intergenic | 45.0% | |
| CAAACATGGAGAAAGGCCTA+CGG | + | Chr8:86290573-86290592 | MsG0880047436.01.T01:CDS | 45.0% | |
| CAGAACAATCCCAAGCTGAT+AGG | - | Chr8:86291778-86291797 | None:intergenic | 45.0% | |
| CAGCCTGACTCAACATAAGA+AGG | - | Chr8:86294114-86294133 | None:intergenic | 45.0% | |
| CCAAGCGTCAGATCAAAACA+TGG | + | Chr8:86293826-86293845 | MsG0880047436.01.T01:CDS | 45.0% | |
| CGCATAACTGACATCTGTTG+AGG | - | Chr8:86294428-86294447 | None:intergenic | 45.0% | |
| CGCTCCATCTAACGTACAAA+TGG | + | Chr8:86294296-86294315 | MsG0880047436.01.T01:CDS | 45.0% | |
| CTTCTTATGTTGAGTCAGGC+TGG | + | Chr8:86294112-86294131 | MsG0880047436.01.T01:intron | 45.0% | |
| GGAGGAAGAACCTGTTGAAA+AGG | + | Chr8:86293246-86293265 | MsG0880047436.01.T01:intron | 45.0% | |
| TAACATCGACAGGCAAGACT+TGG | - | Chr8:86294590-86294609 | None:intergenic | 45.0% | |
| TACCAAGCTCTTAACACTGC+CGG | - | Chr8:86292908-86292927 | None:intergenic | 45.0% | |
| TCGCAGAAACATCGTTCTGT+GGG | - | Chr8:86291651-86291670 | None:intergenic | 45.0% | |
| TGTAGGTTTATGTACACCGG+CGG | + | Chr8:86291247-86291266 | MsG0880047436.01.T01:intron | 45.0% | |
| TGTGGCAACAAAAGAAGGTG+GGG | - | Chr8:86292851-86292870 | None:intergenic | 45.0% | |
| TTCGCAGAAACATCGTTCTG+TGG | - | Chr8:86291652-86291671 | None:intergenic | 45.0% | |
| TTCTAACGCAGGCAATGTCA+TGG | - | Chr8:86291002-86291021 | None:intergenic | 45.0% | |
| TTGTTGAAAGCTGCTCCTTC+AGG | - | Chr8:86292215-86292234 | None:intergenic | 45.0% | |
| ! | GGAATCTTTAAGAGCTCCGT+AGG | - | Chr8:86290592-86290611 | None:intergenic | 45.0% |
| !! | ATATGCTGGTTCACCTTTGC+AGG | + | Chr8:86293402-86293421 | MsG0880047436.01.T01:CDS | 45.0% |
| !! | GGAACATCATTTGCTGTTGC+TGG | - | Chr8:86294349-86294368 | None:intergenic | 45.0% |
| !! | TATGCTGGTTCACCTTTGCA+GGG | + | Chr8:86293403-86293422 | MsG0880047436.01.T01:CDS | 45.0% |
| !!! | CCATGTTTTGATCTGACGCT+TGG | - | Chr8:86293829-86293848 | None:intergenic | 45.0% |
| !!! | TGTTTTGATCTGACGCTTGG+CGG | - | Chr8:86293826-86293845 | None:intergenic | 45.0% |
| AAAAGAAGTTGCTGCAGCGC+CGG | - | Chr8:86292057-86292076 | None:intergenic | 50.0% | |
| AGGTGGGGGCTGTTTATTGT+AGG | - | Chr8:86292836-86292855 | None:intergenic | 50.0% | |
| ATCCGGCAGTGTTAAGAGCT+TGG | + | Chr8:86292903-86292922 | MsG0880047436.01.T01:CDS | 50.0% | |
| CAGCTTGGGATTGTTCTGCA+TGG | + | Chr8:86291780-86291799 | MsG0880047436.01.T01:intron | 50.0% | |
| CGTAGGCCTTTCTCCATGTT+TGG | - | Chr8:86290575-86290594 | None:intergenic | 50.0% | |
| CTACATCAGCTCACCAACCA+AGG | + | Chr8:86291140-86291159 | MsG0880047436.01.T01:CDS | 50.0% | |
| CTCTTAACACTGCCGGATGT+AGG | - | Chr8:86292901-86292920 | None:intergenic | 50.0% | |
| CTTATGTTGAGTCAGGCTGG+TGG | + | Chr8:86294115-86294134 | MsG0880047436.01.T01:intron | 50.0% | |
| CTTCGAACGTGACGTTCCTT+AGG | - | Chr8:86290854-86290873 | None:intergenic | 50.0% | |
| CTTGCAATCATACCACCTGG+TGG | + | Chr8:86293481-86293500 | MsG0880047436.01.T01:CDS | 50.0% | |
| GCACTTGCAATCATACCACC+TGG | + | Chr8:86293478-86293497 | MsG0880047436.01.T01:CDS | 50.0% | |
| GTGGCAACAAAAGAAGGTGG+GGG | - | Chr8:86292850-86292869 | None:intergenic | 50.0% | |
| TGTAGCTGTTGGAGCAGTTC+CGG | + | Chr8:86292035-86292054 | MsG0880047436.01.T01:intron | 50.0% | |
| !! | GTTTTGATCTGACGCTTGGC+GGG | - | Chr8:86293825-86293844 | None:intergenic | 50.0% |
| ATCTAGGCCTTACCACCAGG+TGG | - | Chr8:86293496-86293515 | None:intergenic | 55.0% | |
| CGAACGTGACGTTCCTTAGG+TGG | - | Chr8:86290851-86290870 | None:intergenic | 55.0% | |
| CTTGGCTAGGCCAACCTTTG+TGG | - | Chr8:86290613-86290632 | None:intergenic | 55.0% | |
| GAGTATATGGCTGCTGCTGC+TGG | - | Chr8:86294400-86294419 | None:intergenic | 55.0% | |
| TATGGCTGCTGCTGCTGGTA+AGG | - | Chr8:86294395-86294414 | None:intergenic | 55.0% | |
| !! | CACAAAGGTTGGCCTAGCCA+AGG | + | Chr8:86290611-86290630 | MsG0880047436.01.T01:CDS | 55.0% |
| TATGGCTCCATGCCCCACCA+AGG | + | Chr8:86294494-86294513 | MsG0880047436.01.T01:three_prime_UTR | 60.0% | |
| TGTAGCTCCTTGGTGGGGCA+TGG | - | Chr8:86294504-86294523 | None:intergenic | 60.0% | |
| ! | GATCTGACGCTTGGCGGGTG+TGG | - | Chr8:86293820-86293839 | None:intergenic | 65.0% |
| ! | GCTTGGCGGGTGTGGTTGCT+TGG | - | Chr8:86293812-86293831 | None:intergenic | 65.0% |
| GCGGGTGTGGTTGCTTGGCG+TGG | - | Chr8:86293807-86293826 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr8 | gene | 86290561 | 86294610 | 86290561 | ID=MsG0880047436.01;Name=MsG0880047436.01 |
| Chr8 | mRNA | 86290561 | 86294610 | 86290561 | ID=MsG0880047436.01.T01;Parent=MsG0880047436.01;Name=MsG0880047436.01.T01;_AED=0.41;_eAED=0.46;_QI=0|0.2|0.18|1|0.5|0.54|11|286|340 |
| Chr8 | exon | 86290561 | 86290689 | 86290561 | ID=MsG0880047436.01.T01:exon:17806;Parent=MsG0880047436.01.T01 |
| Chr8 | exon | 86290803 | 86290889 | 86290803 | ID=MsG0880047436.01.T01:exon:17807;Parent=MsG0880047436.01.T01 |
| Chr8 | exon | 86291128 | 86291168 | 86291128 | ID=MsG0880047436.01.T01:exon:17808;Parent=MsG0880047436.01.T01 |
| Chr8 | exon | 86291252 | 86291298 | 86291252 | ID=MsG0880047436.01.T01:exon:17809;Parent=MsG0880047436.01.T01 |
| Chr8 | exon | 86291568 | 86291637 | 86291568 | ID=MsG0880047436.01.T01:exon:17810;Parent=MsG0880047436.01.T01 |
| Chr8 | exon | 86292690 | 86292768 | 86292690 | ID=MsG0880047436.01.T01:exon:17811;Parent=MsG0880047436.01.T01 |
| Chr8 | exon | 86292847 | 86292933 | 86292847 | ID=MsG0880047436.01.T01:exon:17812;Parent=MsG0880047436.01.T01 |
| Chr8 | exon | 86293247 | 86293313 | 86293247 | ID=MsG0880047436.01.T01:exon:17813;Parent=MsG0880047436.01.T01 |
| Chr8 | exon | 86293395 | 86293502 | 86293395 | ID=MsG0880047436.01.T01:exon:17814;Parent=MsG0880047436.01.T01 |
| Chr8 | exon | 86293735 | 86293847 | 86293735 | ID=MsG0880047436.01.T01:exon:17815;Parent=MsG0880047436.01.T01 |
| Chr8 | exon | 86294130 | 86294610 | 86294130 | ID=MsG0880047436.01.T01:exon:17816;Parent=MsG0880047436.01.T01 |
| Chr8 | CDS | 86290561 | 86290689 | 86290561 | ID=MsG0880047436.01.T01:cds;Parent=MsG0880047436.01.T01 |
| Chr8 | CDS | 86290803 | 86290889 | 86290803 | ID=MsG0880047436.01.T01:cds;Parent=MsG0880047436.01.T01 |
| Chr8 | CDS | 86291128 | 86291168 | 86291128 | ID=MsG0880047436.01.T01:cds;Parent=MsG0880047436.01.T01 |
| Chr8 | CDS | 86291252 | 86291298 | 86291252 | ID=MsG0880047436.01.T01:cds;Parent=MsG0880047436.01.T01 |
| Chr8 | CDS | 86291568 | 86291637 | 86291568 | ID=MsG0880047436.01.T01:cds;Parent=MsG0880047436.01.T01 |
| Chr8 | CDS | 86292690 | 86292768 | 86292690 | ID=MsG0880047436.01.T01:cds;Parent=MsG0880047436.01.T01 |
| Chr8 | CDS | 86292847 | 86292933 | 86292847 | ID=MsG0880047436.01.T01:cds;Parent=MsG0880047436.01.T01 |
| Chr8 | CDS | 86293247 | 86293313 | 86293247 | ID=MsG0880047436.01.T01:cds;Parent=MsG0880047436.01.T01 |
| Chr8 | CDS | 86293395 | 86293502 | 86293395 | ID=MsG0880047436.01.T01:cds;Parent=MsG0880047436.01.T01 |
| Chr8 | CDS | 86293735 | 86293847 | 86293735 | ID=MsG0880047436.01.T01:cds;Parent=MsG0880047436.01.T01 |
| Chr8 | CDS | 86294130 | 86294324 | 86294130 | ID=MsG0880047436.01.T01:cds;Parent=MsG0880047436.01.T01 |
| Chr8 | three_prime_UTR | 86294325 | 86294610 | 86294325 | ID=MsG0880047436.01.T01:three_prime_utr;Parent=MsG0880047436.01.T01 |
| Gene Sequence |
| Protein sequence |
