Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880047664.01.T01 | XP_003610460.1 | 95.578 | 294 | 7 | 1 | 1 | 294 | 1 | 288 | 0 | 567 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880047664.01.T01 | Q5E930 | 53.957 | 278 | 117 | 4 | 26 | 295 | 11 | 285 | 3.76E-89 | 276 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880047664.01.T01 | G7JJA0 | 95.578 | 294 | 7 | 1 | 1 | 294 | 1 | 288 | 0.0 | 567 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047967.01 | MsG0880047664.01 | -0.852179 | 5.470393e-61 | 1.133711e-57 |
| MsG0080048036.01 | MsG0880047664.01 | 0.807707 | 4.431980e-50 | 2.485836e-47 |
| MsG0080048059.01 | MsG0880047664.01 | -0.806805 | 6.881149e-50 | 3.770281e-47 |
| MsG0080048694.01 | MsG0880047664.01 | -0.819179 | 1.330387e-52 | 1.016417e-49 |
| MsG0080048695.01 | MsG0880047664.01 | -0.819928 | 8.976097e-53 | 7.002735e-50 |
| MsG0080048697.01 | MsG0880047664.01 | -0.814350 | 1.611555e-51 | 1.078754e-48 |
| MsG0080048813.01 | MsG0880047664.01 | -0.800935 | 1.140891e-48 | 5.379973e-46 |
| MsG0080048887.01 | MsG0880047664.01 | -0.826491 | 2.634286e-54 | 2.474100e-51 |
| MsG0080048889.01 | MsG0880047664.01 | 0.832469 | 9.287851e-56 | 1.039049e-52 |
| MsG0080048917.01 | MsG0880047664.01 | -0.803786 | 2.951871e-49 | 1.496741e-46 |
| MsG0080048918.01 | MsG0880047664.01 | -0.838190 | 3.331472e-57 | 4.428220e-54 |
| MsG0080048919.01 | MsG0880047664.01 | -0.843008 | 1.825070e-58 | 2.816627e-55 |
| MsG0080048948.01 | MsG0880047664.01 | -0.815677 | 8.178009e-52 | 5.675605e-49 |
| MsG0080048992.01 | MsG0880047664.01 | -0.829360 | 5.377959e-55 | 5.492171e-52 |
| MsG0080049008.01 | MsG0880047664.01 | 0.805284 | 1.437534e-49 | 7.575178e-47 |
| MsG0080049015.01 | MsG0880047664.01 | -0.835307 | 1.810594e-56 | 2.205710e-53 |
| MsG0080049023.01 | MsG0880047664.01 | -0.848754 | 5.009810e-60 | 9.288858e-57 |
| MsG0080049024.01 | MsG0880047664.01 | -0.819993 | 8.673457e-53 | 6.778944e-50 |
| MsG0080049038.01 | MsG0880047664.01 | -0.904337 | 1.364481e-79 | 2.101808e-75 |
| MsG0080049066.01 | MsG0880047664.01 | -0.857856 | 1.227404e-62 | 3.072011e-59 |
| MsG0080049072.01 | MsG0880047664.01 | -0.805744 | 1.151486e-49 | 6.140393e-47 |
| MsG0080049133.01 | MsG0880047664.01 | -0.834524 | 2.851727e-56 | 3.393208e-53 |
| MsG0180000367.01 | MsG0880047664.01 | 0.897854 | 9.383370e-77 | 1.080357e-72 |
| MsG0180000399.01 | MsG0880047664.01 | 0.850730 | 1.405747e-60 | 2.779979e-57 |
| MsG0180000423.01 | MsG0880047664.01 | -0.826138 | 3.197156e-54 | 2.972885e-51 |
| MsG0180000466.01 | MsG0880047664.01 | 0.813616 | 2.339428e-51 | 1.535173e-48 |
| MsG0180000467.01 | MsG0880047664.01 | -0.844274 | 8.368236e-59 | 1.344027e-55 |
| MsG0180000497.01 | MsG0880047664.01 | 0.838453 | 2.849595e-57 | 3.818713e-54 |
| MsG0180000719.01 | MsG0880047664.01 | -0.819082 | 1.400028e-52 | 1.066766e-49 |
| MsG0180000723.01 | MsG0880047664.01 | 0.821262 | 4.433945e-53 | 3.589414e-50 |
| MsG0180000762.01 | MsG0880047664.01 | 0.823768 | 1.159170e-53 | 1.007588e-50 |
| MsG0180000929.01 | MsG0880047664.01 | 0.816565 | 5.178368e-52 | 3.682088e-49 |
| MsG0180001054.01 | MsG0880047664.01 | -0.846337 | 2.313511e-59 | 3.968864e-56 |
| MsG0180001072.01 | MsG0880047664.01 | -0.846775 | 1.757063e-59 | 3.057528e-56 |
| MsG0180001079.01 | MsG0880047664.01 | 0.831169 | 1.943467e-55 | 2.092233e-52 |
| MsG0180001084.01 | MsG0880047664.01 | 0.802313 | 5.952106e-49 | 2.906589e-46 |
| MsG0180001137.01 | MsG0880047664.01 | -0.849478 | 3.151736e-60 | 5.982028e-57 |
| MsG0180001264.01 | MsG0880047664.01 | 0.839564 | 1.469825e-57 | 2.037485e-54 |
| MsG0180001290.01 | MsG0880047664.01 | 0.800538 | 1.375392e-48 | 6.420320e-46 |
| MsG0180001484.01 | MsG0880047664.01 | -0.821940 | 3.089954e-53 | 2.549773e-50 |
| MsG0180001486.01 | MsG0880047664.01 | 0.834356 | 3.142067e-56 | 3.719771e-53 |
| MsG0180001497.01 | MsG0880047664.01 | 0.829891 | 3.994061e-55 | 4.142501e-52 |
| MsG0180001503.01 | MsG0880047664.01 | 0.838628 | 2.568081e-57 | 3.459969e-54 |
| MsG0180001513.01 | MsG0880047664.01 | 0.844000 | 9.909923e-59 | 1.578160e-55 |
| MsG0180001515.01 | MsG0880047664.01 | 0.837985 | 3.761049e-57 | 4.968876e-54 |
| MsG0180001533.01 | MsG0880047664.01 | 0.814983 | 1.166820e-51 | 7.945168e-49 |
| MsG0180001614.01 | MsG0880047664.01 | -0.832267 | 1.042081e-55 | 1.158705e-52 |
| MsG0180001925.01 | MsG0880047664.01 | -0.820376 | 7.085593e-53 | 5.597281e-50 |
| MsG0180002006.01 | MsG0880047664.01 | 0.823514 | 1.329237e-53 | 1.146998e-50 |
| MsG0180002099.01 | MsG0880047664.01 | -0.820492 | 6.666134e-53 | 5.282440e-50 |
| MsG0880044058.01 | MsG0880047664.01 | 0.808153 | 3.561551e-50 | 2.021305e-47 |
| MsG0880044312.01 | MsG0880047664.01 | -0.802282 | 6.040004e-49 | 2.947089e-46 |
| MsG0880044317.01 | MsG0880047664.01 | -0.854392 | 1.269507e-61 | 2.830772e-58 |
| MsG0880044339.01 | MsG0880047664.01 | -0.817589 | 3.049347e-52 | 2.229832e-49 |
| MsG0880044352.01 | MsG0880047664.01 | -0.815407 | 9.390803e-52 | 6.468947e-49 |
| MsG0880044387.01 | MsG0880047664.01 | -0.829568 | 4.785647e-55 | 4.916424e-52 |
| MsG0880044545.01 | MsG0880047664.01 | -0.882310 | 1.159953e-70 | 7.031369e-67 |
| MsG0880044548.01 | MsG0880047664.01 | -0.869763 | 2.426603e-66 | 9.210845e-63 |
| MsG0880044688.01 | MsG0880047664.01 | 0.838406 | 2.931043e-57 | 3.921962e-54 |
| MsG0880044715.01 | MsG0880047664.01 | -0.801371 | 9.293609e-49 | 4.430822e-46 |
| MsG0880044968.01 | MsG0880047664.01 | -0.850148 | 2.047854e-60 | 3.973421e-57 |
| MsG0880045063.01 | MsG0880047664.01 | -0.846152 | 2.599124e-59 | 4.431931e-56 |
| MsG0880045188.01 | MsG0880047664.01 | -0.819198 | 1.316914e-52 | 1.006642e-49 |
| MsG0880045274.01 | MsG0880047664.01 | -0.821972 | 3.038121e-53 | 2.509228e-50 |
| MsG0880045321.01 | MsG0880047664.01 | -0.848738 | 5.061584e-60 | 9.380250e-57 |
| MsG0880045356.01 | MsG0880047664.01 | 0.809622 | 1.727570e-50 | 1.019362e-47 |
| MsG0880045369.01 | MsG0880047664.01 | -0.849466 | 3.175451e-60 | 6.025004e-57 |
| MsG0880045385.01 | MsG0880047664.01 | -0.863911 | 1.775199e-64 | 5.471360e-61 |
| MsG0880045413.01 | MsG0880047664.01 | -0.873772 | 1.135021e-67 | 4.984970e-64 |
| MsG0880045414.01 | MsG0880047664.01 | -0.862309 | 5.552604e-64 | 1.618730e-60 |
| MsG0880045628.01 | MsG0880047664.01 | 0.813735 | 2.202164e-51 | 1.449746e-48 |
| MsG0880045677.01 | MsG0880047664.01 | 0.811245 | 7.708719e-51 | 4.747526e-48 |
| MsG0880045698.01 | MsG0880047664.01 | -0.801825 | 7.498829e-49 | 3.616460e-46 |
| MsG0880045703.01 | MsG0880047664.01 | -0.885511 | 7.633839e-72 | 5.255014e-68 |
| MsG0880045778.01 | MsG0880047664.01 | -0.827357 | 1.636029e-54 | 1.575921e-51 |
| MsG0880045854.01 | MsG0880047664.01 | 0.809879 | 1.521240e-50 | 9.036595e-48 |
| MsG0880045968.01 | MsG0880047664.01 | -0.855473 | 6.161780e-62 | 1.424332e-58 |
| MsG0880045991.01 | MsG0880047664.01 | 0.850201 | 1.979360e-60 | 3.847134e-57 |
| MsG0880046010.01 | MsG0880047664.01 | -0.880171 | 6.838552e-70 | 3.814062e-66 |
| MsG0880046038.01 | MsG0880047664.01 | 0.819263 | 1.273334e-52 | 9.750886e-50 |
| MsG0880046040.01 | MsG0880047664.01 | -0.866478 | 2.769773e-65 | 9.348327e-62 |
| MsG0880046092.01 | MsG0880047664.01 | 0.820373 | 7.099417e-53 | 5.607524e-50 |
| MsG0880046105.01 | MsG0880047664.01 | -0.827816 | 1.269055e-54 | 1.238627e-51 |
| MsG0880046151.01 | MsG0880047664.01 | -0.848654 | 5.341016e-60 | 9.870439e-57 |
| MsG0880046158.01 | MsG0880047664.01 | 0.820129 | 8.074256e-53 | 6.334943e-50 |
| MsG0880046174.01 | MsG0880047664.01 | -0.831169 | 1.943920e-55 | 2.092688e-52 |
| MsG0880046189.01 | MsG0880047664.01 | -0.815595 | 8.531534e-52 | 5.907584e-49 |
| MsG0880046212.01 | MsG0880047664.01 | 0.827012 | 1.978930e-54 | 1.886738e-51 |
| MsG0880046219.01 | MsG0880047664.01 | -0.850150 | 2.044503e-60 | 3.967304e-57 |
| MsG0880046341.01 | MsG0880047664.01 | -0.864479 | 1.180404e-64 | 3.711432e-61 |
| MsG0880046402.01 | MsG0880047664.01 | 0.864539 | 1.130766e-64 | 3.562775e-61 |
| MsG0880046403.01 | MsG0880047664.01 | 0.820570 | 6.398491e-53 | 5.081066e-50 |
| MsG0880046429.01 | MsG0880047664.01 | 0.810675 | 1.024211e-50 | 6.213174e-48 |
| MsG0880046469.01 | MsG0880047664.01 | -0.867385 | 1.422757e-65 | 4.958776e-62 |
| MsG0880046838.01 | MsG0880047664.01 | -0.888774 | 4.382446e-73 | 3.441262e-69 |
| MsG0880046863.01 | MsG0880047664.01 | 0.815285 | 9.998594e-52 | 6.864765e-49 |
| MsG0880046876.01 | MsG0880047664.01 | -0.854954 | 8.726276e-62 | 1.982430e-58 |
| MsG0880046932.01 | MsG0880047664.01 | 0.820358 | 7.154436e-53 | 5.648336e-50 |
| MsG0880047057.01 | MsG0880047664.01 | 0.836198 | 1.077047e-56 | 1.347830e-53 |
| MsG0880047207.01 | MsG0880047664.01 | -0.816757 | 4.689889e-52 | 3.352399e-49 |
| MsG0880047299.01 | MsG0880047664.01 | 0.814988 | 1.163557e-51 | 7.924202e-49 |
| MsG0880047318.01 | MsG0880047664.01 | -0.866175 | 3.454329e-65 | 1.153492e-61 |
| MsG0880047406.01 | MsG0880047664.01 | -0.844315 | 8.157856e-59 | 1.311893e-55 |
| MsG0880047436.01 | MsG0880047664.01 | -0.801293 | 9.642289e-49 | 4.588037e-46 |
| MsG0880047450.01 | MsG0880047664.01 | 0.854459 | 1.213594e-61 | 2.712101e-58 |
| MsG0880047493.01 | MsG0880047664.01 | 0.843727 | 1.173054e-58 | 1.852072e-55 |
| MsG0880047542.01 | MsG0880047664.01 | 0.805993 | 1.020803e-49 | 5.478319e-47 |
| MsG0880047568.01 | MsG0880047664.01 | 0.803439 | 3.484757e-49 | 1.751189e-46 |
| MsG0880047628.01 | MsG0880047664.01 | -0.834565 | 2.785624e-56 | 3.318521e-53 |
| MsG0880047664.01 | MsG0880047697.01 | 0.840987 | 6.242864e-58 | 9.045103e-55 |
| MsG0880047664.01 | MsG0880047714.01 | 0.898948 | 3.214502e-77 | 3.887824e-73 |
| MsG0880047664.01 | MsG0880047720.01 | 0.829568 | 4.786265e-55 | 4.917030e-52 |
| MsG0180002808.01 | MsG0880047664.01 | 0.856683 | 2.726355e-62 | 6.559124e-59 |
| MsG0180002809.01 | MsG0880047664.01 | -0.842481 | 2.519263e-58 | 3.825285e-55 |
| MsG0180002935.01 | MsG0880047664.01 | 0.857324 | 1.764350e-62 | 4.337863e-59 |
| MsG0180003114.01 | MsG0880047664.01 | -0.835292 | 1.826703e-56 | 2.224326e-53 |
| MsG0180003235.01 | MsG0880047664.01 | 0.828698 | 7.778752e-55 | 7.790274e-52 |
| MsG0180003351.01 | MsG0880047664.01 | -0.840985 | 6.249820e-58 | 9.054698e-55 |
| MsG0180003372.01 | MsG0880047664.01 | 0.828014 | 1.137772e-54 | 1.117088e-51 |
| MsG0180003375.01 | MsG0880047664.01 | 0.872186 | 3.859619e-67 | 1.599895e-63 |
| MsG0180003405.01 | MsG0880047664.01 | -0.829390 | 5.286431e-55 | 5.403393e-52 |
| MsG0180003484.01 | MsG0880047664.01 | 0.903834 | 2.301230e-79 | 3.464215e-75 |
| MsG0180003504.01 | MsG0880047664.01 | 0.815001 | 1.156177e-51 | 7.876722e-49 |
| MsG0180003617.01 | MsG0880047664.01 | -0.850368 | 1.777148e-60 | 3.473044e-57 |
| MsG0180003757.01 | MsG0880047664.01 | -0.860737 | 1.676091e-63 | 4.628930e-60 |
| MsG0180003758.01 | MsG0880047664.01 | -0.865432 | 5.932947e-65 | 1.929699e-61 |
| MsG0180003759.01 | MsG0880047664.01 | -0.824511 | 7.758752e-54 | 6.886862e-51 |
| MsG0180003779.01 | MsG0880047664.01 | -0.860972 | 1.422425e-63 | 3.960093e-60 |
| MsG0180003880.01 | MsG0880047664.01 | -0.811523 | 6.710416e-51 | 4.163192e-48 |
| MsG0180003904.01 | MsG0880047664.01 | -0.835229 | 1.895364e-56 | 2.303471e-53 |
| MsG0180003905.01 | MsG0880047664.01 | 0.809368 | 1.958403e-50 | 1.147742e-47 |
| MsG0180003908.01 | MsG0880047664.01 | -0.870340 | 1.570780e-66 | 6.088965e-63 |
| MsG0180003985.01 | MsG0880047664.01 | -0.838295 | 3.129635e-57 | 4.173131e-54 |
| MsG0180004121.01 | MsG0880047664.01 | 0.837868 | 4.032532e-57 | 5.308069e-54 |
| MsG0180004124.01 | MsG0880047664.01 | -0.823719 | 1.190609e-53 | 1.033464e-50 |
| MsG0180004125.01 | MsG0880047664.01 | -0.825111 | 5.600086e-54 | 5.057222e-51 |
| MsG0180004177.01 | MsG0880047664.01 | -0.804132 | 2.501768e-49 | 1.279806e-46 |
| MsG0180004226.01 | MsG0880047664.01 | -0.824017 | 1.013536e-53 | 8.870136e-51 |
| MsG0180004322.01 | MsG0880047664.01 | -0.874678 | 5.599762e-68 | 2.542814e-64 |
| MsG0180004386.01 | MsG0880047664.01 | -0.807466 | 4.984882e-50 | 2.778676e-47 |
| MsG0180004502.01 | MsG0880047664.01 | -0.803685 | 3.098133e-49 | 1.566777e-46 |
| MsG0180004553.01 | MsG0880047664.01 | -0.844321 | 8.126009e-59 | 1.307050e-55 |
| MsG0180004580.01 | MsG0880047664.01 | -0.834387 | 3.086988e-56 | 3.657839e-53 |
| MsG0180004581.01 | MsG0880047664.01 | -0.853654 | 2.071369e-61 | 4.507858e-58 |
| MsG0180004634.01 | MsG0880047664.01 | -0.806983 | 6.310805e-50 | 3.473675e-47 |
| MsG0180004705.01 | MsG0880047664.01 | 0.809639 | 1.712789e-50 | 1.011104e-47 |
| MsG0180004714.01 | MsG0880047664.01 | -0.845837 | 3.165380e-59 | 5.344202e-56 |
| MsG0180004737.01 | MsG0880047664.01 | -0.837432 | 5.215471e-57 | 6.773483e-54 |
| MsG0180004787.01 | MsG0880047664.01 | -0.863619 | 2.187638e-64 | 6.673889e-61 |
| MsG0180005127.01 | MsG0880047664.01 | 0.849404 | 3.305619e-60 | 6.259403e-57 |
| MsG0180005146.01 | MsG0880047664.01 | 0.840538 | 8.185852e-58 | 1.169637e-54 |
| MsG0180005242.01 | MsG0880047664.01 | -0.811346 | 7.330857e-51 | 4.526529e-48 |
| MsG0180005291.01 | MsG0880047664.01 | -0.830552 | 2.753971e-55 | 2.911056e-52 |
| MsG0180005353.01 | MsG0880047664.01 | 0.852045 | 5.971616e-61 | 1.232283e-57 |
| MsG0180005369.01 | MsG0880047664.01 | -0.860209 | 2.422178e-63 | 6.569519e-60 |
| MsG0180005516.01 | MsG0880047664.01 | -0.814404 | 1.567601e-51 | 1.050924e-48 |
| MsG0180005672.01 | MsG0880047664.01 | -0.819304 | 1.246126e-52 | 9.552733e-50 |
| MsG0180005681.01 | MsG0880047664.01 | 0.803994 | 2.672614e-49 | 1.362434e-46 |
| MsG0180005757.01 | MsG0880047664.01 | 0.807709 | 4.427681e-50 | 2.483557e-47 |
| MsG0180005762.01 | MsG0880047664.01 | 0.893878 | 4.171025e-75 | 4.050536e-71 |
| MsG0180005767.01 | MsG0880047664.01 | -0.812374 | 4.377964e-51 | 2.778778e-48 |
| MsG0180005817.01 | MsG0880047664.01 | -0.810943 | 8.961888e-51 | 5.476009e-48 |
| MsG0180005819.01 | MsG0880047664.01 | 0.818335 | 2.068047e-52 | 1.543671e-49 |
| MsG0180005822.01 | MsG0880047664.01 | -0.806898 | 6.577677e-50 | 3.612576e-47 |
| MsG0180005833.01 | MsG0880047664.01 | -0.835216 | 1.909399e-56 | 2.319575e-53 |
| MsG0180005848.01 | MsG0880047664.01 | -0.851410 | 9.039718e-61 | 1.828186e-57 |
| MsG0180005898.01 | MsG0880047664.01 | -0.828902 | 6.944438e-55 | 6.995720e-52 |
| MsG0180006010.01 | MsG0880047664.01 | 0.825215 | 5.291723e-54 | 4.793116e-51 |
| MsG0180006063.01 | MsG0880047664.01 | -0.856848 | 2.437531e-62 | 5.896043e-59 |
| MsG0180006110.01 | MsG0880047664.01 | 0.835459 | 1.657488e-56 | 2.028117e-53 |
| MsG0180006116.01 | MsG0880047664.01 | 0.805260 | 1.454353e-49 | 7.658889e-47 |
| MsG0180006183.01 | MsG0880047664.01 | 0.807412 | 5.119920e-50 | 2.849848e-47 |
| MsG0180006191.01 | MsG0880047664.01 | 0.809098 | 2.238133e-50 | 1.302234e-47 |
| MsG0180006212.01 | MsG0880047664.01 | -0.855151 | 7.648254e-62 | 1.748804e-58 |
| MsG0180006227.01 | MsG0880047664.01 | -0.813098 | 3.040162e-51 | 1.966895e-48 |
| MsG0280006307.01 | MsG0880047664.01 | -0.827101 | 1.884533e-54 | 1.801443e-51 |
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| MsG0580029172.01 | MsG0880047664.01 | -0.853050 | 3.087346e-61 | 6.583883e-58 |
| MsG0580029177.01 | MsG0880047664.01 | -0.881225 | 2.864024e-70 | 1.664167e-66 |
| MsG0580029240.01 | MsG0880047664.01 | 0.802271 | 6.073461e-49 | 2.962454e-46 |
| MsG0580029296.01 | MsG0880047664.01 | 0.872185 | 3.862430e-67 | 1.601001e-63 |
| MsG0580029518.01 | MsG0880047664.01 | 0.835546 | 1.576004e-56 | 1.933340e-53 |
| MsG0580029696.01 | MsG0880047664.01 | 0.830283 | 3.203806e-55 | 3.360341e-52 |
| MsG0580029751.01 | MsG0880047664.01 | -0.845613 | 3.640364e-59 | 6.100482e-56 |
| MsG0580029792.01 | MsG0880047664.01 | -0.839218 | 1.806822e-57 | 2.478495e-54 |
| MsG0580029991.01 | MsG0880047664.01 | -0.845815 | 3.208385e-59 | 5.413045e-56 |
| MsG0580030014.01 | MsG0880047664.01 | -0.824645 | 7.212846e-54 | 6.427866e-51 |
| MsG0580030067.01 | MsG0880047664.01 | -0.814993 | 1.160856e-51 | 7.906989e-49 |
| MsG0580030179.01 | MsG0880047664.01 | 0.820886 | 5.412250e-53 | 4.336231e-50 |
| MsG0580030197.01 | MsG0880047664.01 | -0.852099 | 5.764395e-61 | 1.191623e-57 |
| MsG0580030237.01 | MsG0880047664.01 | -0.815608 | 8.475062e-52 | 5.870747e-49 |
| MsG0680030296.01 | MsG0880047664.01 | 0.829756 | 4.308339e-55 | 4.451122e-52 |
| MsG0680030439.01 | MsG0880047664.01 | -0.826765 | 2.266199e-54 | 2.145183e-51 |
| MsG0680030628.01 | MsG0880047664.01 | 0.803808 | 2.921387e-49 | 1.482072e-46 |
| MsG0680030635.01 | MsG0880047664.01 | -0.866546 | 2.634318e-65 | 8.913053e-62 |
| MsG0680030658.01 | MsG0880047664.01 | -0.834667 | 2.624540e-56 | 3.135798e-53 |
| MsG0280006534.01 | MsG0880047664.01 | -0.823337 | 1.462396e-53 | 1.255514e-50 |
| MsG0280006559.01 | MsG0880047664.01 | 0.817598 | 3.034571e-52 | 2.219628e-49 |
| MsG0280006575.01 | MsG0880047664.01 | 0.801027 | 1.092813e-48 | 5.165392e-46 |
| MsG0280006579.01 | MsG0880047664.01 | 0.821936 | 3.096795e-53 | 2.555077e-50 |
| MsG0280006898.01 | MsG0880047664.01 | 0.850293 | 1.864321e-60 | 3.634629e-57 |
| MsG0280006973.01 | MsG0880047664.01 | -0.820889 | 5.402224e-53 | 4.328602e-50 |
| MsG0280007016.01 | MsG0880047664.01 | -0.829364 | 5.365399e-55 | 5.480046e-52 |
| MsG0280007017.01 | MsG0880047664.01 | -0.849221 | 3.715728e-60 | 6.996043e-57 |
| MsG0280007163.01 | MsG0880047664.01 | 0.844055 | 9.577928e-59 | 1.528060e-55 |
| MsG0280007199.01 | MsG0880047664.01 | 0.855546 | 5.868561e-62 | 1.359683e-58 |
| MsG0280007201.01 | MsG0880047664.01 | 0.829326 | 5.481081e-55 | 5.592209e-52 |
| MsG0280007216.01 | MsG0880047664.01 | 0.840234 | 9.831759e-58 | 1.391676e-54 |
| MsG0280007233.01 | MsG0880047664.01 | -0.829941 | 3.884055e-55 | 4.033920e-52 |
| MsG0280007247.01 | MsG0880047664.01 | -0.802642 | 5.093359e-49 | 2.507889e-46 |
| MsG0280007288.01 | MsG0880047664.01 | -0.869306 | 3.418267e-66 | 1.276683e-62 |
| MsG0280007291.01 | MsG0880047664.01 | -0.856107 | 4.023961e-62 | 9.498972e-59 |
| MsG0280007338.01 | MsG0880047664.01 | 0.809382 | 1.944866e-50 | 1.140236e-47 |
| MsG0280007423.01 | MsG0880047664.01 | -0.812438 | 4.240403e-51 | 2.696299e-48 |
| MsG0280007426.01 | MsG0880047664.01 | 0.840001 | 1.130912e-57 | 1.589414e-54 |
| MsG0280007649.01 | MsG0880047664.01 | -0.842300 | 2.812270e-58 | 4.245763e-55 |
| MsG0280007650.01 | MsG0880047664.01 | -0.823662 | 1.227849e-53 | 1.064003e-50 |
| MsG0280007653.01 | MsG0880047664.01 | -0.848277 | 6.788746e-60 | 1.239419e-56 |
| MsG0280007678.01 | MsG0880047664.01 | 0.816114 | 6.535089e-52 | 4.589857e-49 |
| MsG0280007689.01 | MsG0880047664.01 | 0.800784 | 1.225296e-48 | 5.755330e-46 |
| MsG0280007783.01 | MsG0880047664.01 | -0.809545 | 1.794762e-50 | 1.056771e-47 |
| MsG0280007786.01 | MsG0880047664.01 | 0.897553 | 1.257007e-76 | 1.427816e-72 |
| MsG0280008226.01 | MsG0880047664.01 | 0.868797 | 4.997692e-66 | 1.831672e-62 |
| MsG0280008328.01 | MsG0880047664.01 | 0.806216 | 9.160533e-50 | 4.944299e-47 |
| MsG0280008659.01 | MsG0880047664.01 | 0.817328 | 3.490982e-52 | 2.534628e-49 |
| MsG0280009008.01 | MsG0880047664.01 | -0.820963 | 5.195523e-53 | 4.171766e-50 |
| MsG0280009079.01 | MsG0880047664.01 | -0.855673 | 5.386681e-62 | 1.253458e-58 |
| MsG0280009094.01 | MsG0880047664.01 | -0.869975 | 2.069373e-66 | 7.916273e-63 |
| MsG0280009101.01 | MsG0880047664.01 | -0.801846 | 7.427070e-49 | 3.583760e-46 |
| MsG0280009167.01 | MsG0880047664.01 | 0.874640 | 5.767741e-68 | 2.615877e-64 |
| MsG0280009287.01 | MsG0880047664.01 | -0.836103 | 1.138340e-56 | 1.420259e-53 |
| MsG0280009432.01 | MsG0880047664.01 | 0.801149 | 1.031701e-48 | 4.891419e-46 |
| MsG0280009526.01 | MsG0880047664.01 | 0.864321 | 1.322746e-64 | 4.135572e-61 |
| MsG0280009579.01 | MsG0880047664.01 | -0.800087 | 1.698469e-48 | 7.838494e-46 |
| MsG0280009742.01 | MsG0880047664.01 | -0.866005 | 3.909570e-65 | 1.297821e-61 |
| MsG0280009776.01 | MsG0880047664.01 | -0.817038 | 4.056853e-52 | 2.922280e-49 |
| MsG0280009864.01 | MsG0880047664.01 | -0.867189 | 1.644486e-65 | 5.690209e-62 |
| MsG0280010142.01 | MsG0880047664.01 | -0.830637 | 2.624678e-55 | 2.781541e-52 |
| MsG0280010143.01 | MsG0880047664.01 | -0.823347 | 1.454702e-53 | 1.249234e-50 |
| MsG0280010149.01 | MsG0880047664.01 | -0.844073 | 9.475476e-59 | 1.512389e-55 |
| MsG0280010240.01 | MsG0880047664.01 | 0.808486 | 3.025005e-50 | 1.731825e-47 |
| MsG0280010356.01 | MsG0880047664.01 | -0.803638 | 3.168655e-49 | 1.600529e-46 |
| MsG0280010410.01 | MsG0880047664.01 | 0.843027 | 1.803087e-58 | 2.784446e-55 |
| MsG0280010425.01 | MsG0880047664.01 | 0.836585 | 8.582515e-57 | 1.086307e-53 |
| MsG0680035841.01 | MsG0880047664.01 | 0.823859 | 1.104037e-53 | 9.620451e-51 |
| MsG0680035870.01 | MsG0880047664.01 | -0.855201 | 7.392595e-62 | 1.693155e-58 |
| MsG0780035993.01 | MsG0880047664.01 | 0.816568 | 5.170812e-52 | 3.677001e-49 |
| MsG0780035994.01 | MsG0880047664.01 | -0.857838 | 1.242399e-62 | 3.107871e-59 |
| MsG0780036054.01 | MsG0880047664.01 | 0.846553 | 2.020674e-59 | 3.490995e-56 |
| MsG0780036064.01 | MsG0880047664.01 | -0.827696 | 1.356799e-54 | 1.319628e-51 |
| MsG0780036068.01 | MsG0880047664.01 | -0.813610 | 2.346508e-51 | 1.539564e-48 |
| MsG0780036199.01 | MsG0880047664.01 | 0.811674 | 6.220651e-51 | 3.874374e-48 |
| MsG0780036208.01 | MsG0880047664.01 | 0.805019 | 1.633604e-49 | 8.550016e-47 |
| MsG0780036236.01 | MsG0880047664.01 | -0.833189 | 6.153434e-56 | 7.034034e-53 |
| MsG0780036370.01 | MsG0880047664.01 | 0.800605 | 1.332271e-48 | 6.229851e-46 |
| MsG0780036480.01 | MsG0880047664.01 | 0.818861 | 1.571642e-52 | 1.190330e-49 |
| MsG0780036661.01 | MsG0880047664.01 | 0.801731 | 7.839281e-49 | 3.771510e-46 |
| MsG0780036839.01 | MsG0880047664.01 | 0.810853 | 9.373524e-51 | 5.713494e-48 |
| MsG0780036909.01 | MsG0880047664.01 | -0.826030 | 3.392298e-54 | 3.144634e-51 |
| MsG0780036960.01 | MsG0880047664.01 | 0.805559 | 1.259212e-49 | 6.682426e-47 |
| MsG0780037458.01 | MsG0880047664.01 | -0.838312 | 3.099137e-57 | 4.134596e-54 |
| MsG0780037698.01 | MsG0880047664.01 | -0.840322 | 9.321237e-58 | 1.322891e-54 |
| MsG0780037734.01 | MsG0880047664.01 | -0.800810 | 1.210343e-48 | 5.688905e-46 |
| MsG0780037751.01 | MsG0880047664.01 | 0.808414 | 3.134489e-50 | 1.791084e-47 |
| MsG0780038047.01 | MsG0880047664.01 | -0.852873 | 3.468909e-61 | 7.353086e-58 |
| MsG0780038305.01 | MsG0880047664.01 | 0.848852 | 4.705144e-60 | 8.751967e-57 |
| MsG0780038307.01 | MsG0880047664.01 | 0.886399 | 3.537131e-72 | 2.522728e-68 |
| MsG0780038399.01 | MsG0880047664.01 | 0.818166 | 2.258262e-52 | 1.677741e-49 |
| MsG0780038496.01 | MsG0880047664.01 | -0.801339 | 9.433723e-49 | 4.493986e-46 |
| MsG0780038519.01 | MsG0880047664.01 | 0.835512 | 1.607293e-56 | 1.969819e-53 |
| MsG0780038573.01 | MsG0880047664.01 | -0.855681 | 5.357754e-62 | 1.247059e-58 |
| MsG0780038810.01 | MsG0880047664.01 | 0.823705 | 1.199245e-53 | 1.040610e-50 |
| MsG0780038834.01 | MsG0880047664.01 | -0.812067 | 5.108634e-51 | 3.215648e-48 |
| MsG0780038914.01 | MsG0880047664.01 | 0.845164 | 4.816967e-59 | 7.956698e-56 |
| MsG0780038919.01 | MsG0880047664.01 | 0.844254 | 8.471314e-59 | 1.359660e-55 |
| MsG0780039237.01 | MsG0880047664.01 | 0.844212 | 8.697185e-59 | 1.394228e-55 |
| MsG0780039287.01 | MsG0880047664.01 | -0.837562 | 4.832025e-57 | 6.300696e-54 |
| MsG0780039431.01 | MsG0880047664.01 | 0.885197 | 1.000561e-71 | 6.804336e-68 |
| MsG0780039576.01 | MsG0880047664.01 | 0.803517 | 3.356911e-49 | 1.690393e-46 |
| MsG0780039619.01 | MsG0880047664.01 | 0.842860 | 1.997387e-58 | 3.068583e-55 |
| MsG0780039704.01 | MsG0880047664.01 | -0.827549 | 1.471182e-54 | 1.424825e-51 |
| MsG0780039821.01 | MsG0880047664.01 | -0.862318 | 5.517813e-64 | 1.609167e-60 |
| MsG0780039836.01 | MsG0880047664.01 | -0.851276 | 9.860973e-61 | 1.985482e-57 |
| MsG0780039838.01 | MsG0880047664.01 | -0.837563 | 4.828152e-57 | 6.295876e-54 |
| MsG0780039839.01 | MsG0880047664.01 | -0.848632 | 5.415070e-60 | 9.999629e-57 |
| MsG0780039860.01 | MsG0880047664.01 | -0.813593 | 2.365979e-51 | 1.551662e-48 |
| MsG0780039883.01 | MsG0880047664.01 | 0.862965 | 3.486021e-64 | 1.039737e-60 |
| MsG0780039912.01 | MsG0880047664.01 | 0.844568 | 6.976919e-59 | 1.131047e-55 |
| MsG0780039914.01 | MsG0880047664.01 | 0.805818 | 1.111026e-49 | 5.935708e-47 |
| MsG0780039916.01 | MsG0880047664.01 | 0.831961 | 1.240459e-55 | 1.367217e-52 |
| MsG0780039917.01 | MsG0880047664.01 | 0.806058 | 9.889983e-50 | 5.316405e-47 |
| MsG0780039923.01 | MsG0880047664.01 | 0.862373 | 5.304514e-64 | 1.550061e-60 |
| MsG0780039925.01 | MsG0880047664.01 | 0.855868 | 4.724012e-62 | 1.106358e-58 |
| MsG0780040034.01 | MsG0880047664.01 | 0.806916 | 6.519855e-50 | 3.582515e-47 |
| MsG0780040072.01 | MsG0880047664.01 | -0.861199 | 1.212934e-63 | 3.403849e-60 |
| MsG0780040081.01 | MsG0880047664.01 | 0.820423 | 6.912802e-53 | 5.467799e-50 |
| MsG0780040121.01 | MsG0880047664.01 | -0.857848 | 1.233808e-62 | 3.087392e-59 |
| MsG0780040154.01 | MsG0880047664.01 | -0.826160 | 3.160168e-54 | 2.940192e-51 |
| MsG0780040158.01 | MsG0880047664.01 | -0.814446 | 1.534481e-51 | 1.029848e-48 |
| MsG0780040167.01 | MsG0880047664.01 | -0.802850 | 4.613514e-49 | 2.283857e-46 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880047664.01.T01 | MTR_4g132400 | 95.578 | 294 | 7 | 1 | 1 | 294 | 1 | 288 | 0.0 | 567 |
| MsG0880047664.01.T01 | MTR_4g049640 | 50.709 | 282 | 138 | 1 | 1 | 282 | 1 | 281 | 1.60e-83 | 258 |
| MsG0880047664.01.T01 | MTR_3g112530 | 52.941 | 238 | 110 | 2 | 45 | 281 | 43 | 279 | 9.51e-77 | 241 |
| MsG0880047664.01.T01 | MTR_4g101880 | 39.922 | 258 | 147 | 4 | 39 | 295 | 177 | 427 | 8.27e-54 | 186 |
| MsG0880047664.01.T01 | MTR_6g034030 | 37.269 | 271 | 161 | 5 | 25 | 295 | 215 | 476 | 4.87e-53 | 182 |
| MsG0880047664.01.T01 | MTR_6g034030 | 37.175 | 269 | 160 | 5 | 25 | 293 | 215 | 474 | 5.29e-52 | 182 |
| MsG0880047664.01.T01 | MTR_0549s0020 | 36.803 | 269 | 161 | 6 | 25 | 293 | 143 | 402 | 8.25e-51 | 177 |
| MsG0880047664.01.T01 | MTR_6g045200 | 36.431 | 269 | 162 | 6 | 25 | 293 | 206 | 465 | 9.58e-50 | 176 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880047664.01.T01 | AT1G62280 | 53.957 | 278 | 117 | 4 | 26 | 295 | 11 | 285 | 3.83e-90 | 276 |
| MsG0880047664.01.T01 | AT1G62262 | 52.128 | 282 | 113 | 4 | 19 | 295 | 13 | 277 | 1.44e-86 | 266 |
| MsG0880047664.01.T01 | AT5G24030 | 39.044 | 251 | 145 | 3 | 43 | 293 | 253 | 495 | 7.32e-53 | 182 |
| MsG0880047664.01.T01 | AT5G24030 | 39.044 | 251 | 145 | 3 | 43 | 293 | 253 | 495 | 8.71e-52 | 182 |
| MsG0880047664.01.T01 | AT4G27970 | 37.109 | 256 | 147 | 4 | 43 | 295 | 138 | 382 | 2.54e-48 | 167 |
| MsG0880047664.01.T01 | AT4G27970 | 37.109 | 256 | 147 | 4 | 43 | 295 | 138 | 382 | 2.54e-48 | 167 |
| MsG0880047664.01.T01 | AT1G12480 | 36.765 | 272 | 164 | 3 | 26 | 296 | 167 | 431 | 3.17e-48 | 171 |
| MsG0880047664.01.T01 | AT4G27970 | 37.109 | 256 | 147 | 4 | 43 | 295 | 138 | 382 | 2.75e-47 | 167 |
| MsG0880047664.01.T01 | AT4G27970 | 37.109 | 256 | 147 | 4 | 43 | 295 | 138 | 382 | 2.75e-47 | 167 |
| MsG0880047664.01.T01 | AT4G27970 | 37.705 | 244 | 138 | 4 | 55 | 295 | 1 | 233 | 1.40e-46 | 162 |
| MsG0880047664.01.T01 | AT4G27970 | 37.705 | 244 | 138 | 4 | 55 | 295 | 1 | 233 | 1.40e-46 | 162 |
Find 60 sgRNAs with CRISPR-Local
Find 67 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAATATATATAGGGTAATTT+TGG | 0.163030 | 8:+89371400 | None:intergenic |
| GTCAACCTGGTTTCTGTTAT+AGG | 0.207016 | 8:-89371706 | MsG0880047664.01.T01:CDS |
| CTTATATAATGCAGGCTTGC+AGG | 0.280775 | 8:-89371335 | MsG0880047664.01.T01:CDS |
| GCTAAGCCAAGGAATGTTAA+AGG | 0.296789 | 8:+89371252 | None:intergenic |
| TCAACCTGGTTTCTGTTATA+GGG | 0.297612 | 8:-89371705 | MsG0880047664.01.T01:CDS |
| GACCTACCTGAGAAATAAAA+AGG | 0.303132 | 8:+89371422 | None:intergenic |
| GAATGTGATGGCTTGGTGAT+TGG | 0.310351 | 8:+89372195 | None:intergenic |
| GCAATTTCAATGTATTCATT+AGG | 0.313578 | 8:-89371634 | MsG0880047664.01.T01:CDS |
| ATAAGCAACTAAATATATAT+AGG | 0.322188 | 8:+89371390 | None:intergenic |
| CTGTTGCTTATCTATTACTT+TGG | 0.340533 | 8:-89372026 | MsG0880047664.01.T01:CDS |
| GATGAATTTGCACATCATAT+TGG | 0.345252 | 8:-89371925 | MsG0880047664.01.T01:CDS |
| TCATTCCCTTTAACATTCCT+TGG | 0.356219 | 8:-89371258 | MsG0880047664.01.T01:CDS |
| CAAGCTAGACTTGCCATACT+TGG | 0.362804 | 8:+89371505 | None:intergenic |
| CACACAATTATGTCAATTGT+TGG | 0.378332 | 8:+89372267 | None:intergenic |
| ACAATGAATCACAAACTCTT+TGG | 0.388818 | 8:-89372071 | MsG0880047664.01.T01:CDS |
| CCTTGATCATTACAATGAAA+TGG | 0.393096 | 8:+89371358 | None:intergenic |
| CCATTTCATTGTAATGATCA+AGG | 0.404012 | 8:-89371358 | MsG0880047664.01.T01:CDS |
| AATGTGATGGCTTGGTGATT+GGG | 0.406822 | 8:+89372196 | None:intergenic |
| TAAGCAACTAAATATATATA+GGG | 0.409041 | 8:+89371391 | None:intergenic |
| TGCTTCAAGCATCACCGCCT+TGG | 0.430111 | 8:-89371861 | MsG0880047664.01.T01:CDS |
| GCTCAAGTTATGACAGAAAT+CGG | 0.453671 | 8:-89371670 | MsG0880047664.01.T01:CDS |
| ATAACAGAAACCAGGTTGAC+AGG | 0.456215 | 8:+89371709 | None:intergenic |
| GGTTTCTGTTATAGGGAACT+TGG | 0.463993 | 8:-89371698 | MsG0880047664.01.T01:CDS |
| TTGGTGCTCAAGCTTTGCTA+TGG | 0.471950 | 8:-89372113 | MsG0880047664.01.T01:CDS |
| TTAACTACATGTATACTCCT+TGG | 0.476184 | 8:-89371900 | MsG0880047664.01.T01:CDS |
| CTAAGCCAAGGAATGTTAAA+GGG | 0.477768 | 8:+89371253 | None:intergenic |
| TGACTCTGAATGTGATGGCT+TGG | 0.485943 | 8:+89372188 | None:intergenic |
| GAGCATATAAAGAAAGGATA+AGG | 0.489737 | 8:+89371978 | None:intergenic |
| GCATGGATCTTAGTTAAGAA+TGG | 0.489812 | 8:+89372162 | None:intergenic |
| TTCAATGTATTCATTAGGAA+TGG | 0.492135 | 8:-89371629 | MsG0880047664.01.T01:CDS |
| CAAGTATGGCAAGTCTAGCT+TGG | 0.498344 | 8:-89371504 | MsG0880047664.01.T01:CDS |
| CTAGCTTGGAAATCCATCTC+AGG | 0.499285 | 8:-89371490 | MsG0880047664.01.T01:CDS |
| GCACTTGAGCATATAAAGAA+AGG | 0.500953 | 8:+89371972 | None:intergenic |
| TGTTCAAGAAAACTATGAAA+AGG | 0.514872 | 8:-89371305 | MsG0880047664.01.T01:CDS |
| AGCACTAGTAGTATTGTTCG+TGG | 0.515674 | 8:+89372239 | None:intergenic |
| GTGATGGCTTGGTGATTGGG+TGG | 0.520148 | 8:+89372199 | None:intergenic |
| GATCAAGGCTTATATAATGC+AGG | 0.526452 | 8:-89371343 | MsG0880047664.01.T01:CDS |
| AGTAGCAAACCCTGTCAACC+TGG | 0.530614 | 8:-89371719 | MsG0880047664.01.T01:CDS |
| TTCTGTTATAGGGAACTTGG+TGG | 0.536173 | 8:-89371695 | MsG0880047664.01.T01:CDS |
| GAATCACAAACTCTTTGGCA+TGG | 0.539825 | 8:-89372066 | MsG0880047664.01.T01:CDS |
| AATGGTTCACTACTGAAAAG+AGG | 0.541292 | 8:-89371753 | MsG0880047664.01.T01:CDS |
| TAAGCTGGTCTTAGCACTAC+AGG | 0.541582 | 8:+89371547 | None:intergenic |
| ACTATAGAATAGAATGGGTG+AGG | 0.549206 | 8:-89372301 | None:intergenic |
| GACGAGAAAAGCACCTGAGA+TGG | 0.550784 | 8:+89371477 | None:intergenic |
| AAGTTATGACAGAAATCGGT+TGG | 0.554540 | 8:-89371666 | MsG0880047664.01.T01:CDS |
| TGATGGCTTGGTGATTGGGT+GGG | 0.556380 | 8:+89372200 | None:intergenic |
| CTTGCACTTTAATGCAGTGA+AGG | 0.559661 | 8:-89371947 | MsG0880047664.01.T01:CDS |
| TAGCAAAGCTTGAGCACCAA+AGG | 0.566448 | 8:+89372116 | None:intergenic |
| TTCTTAACTAAGATCCATGC+AGG | 0.573358 | 8:-89372159 | MsG0880047664.01.T01:CDS |
| TGAAAAGGCTAAACGTTACA+TGG | 0.577666 | 8:-89371290 | MsG0880047664.01.T01:CDS |
| TAACAGAAACCAGGTTGACA+GGG | 0.582523 | 8:+89371710 | None:intergenic |
| AGTAATAGATAAGCAACAGA+AGG | 0.591520 | 8:+89372030 | None:intergenic |
| ATGAGAAGATATGAAATCCA+AGG | 0.593130 | 8:+89371883 | None:intergenic |
| CATATAAAGAAAGGATAAGG+TGG | 0.598970 | 8:+89371981 | None:intergenic |
| GGTTGTGACTCTGAATGTGA+TGG | 0.605496 | 8:+89372183 | None:intergenic |
| ATTCAGCACAAGCTAAGCCA+AGG | 0.637854 | 8:+89371241 | None:intergenic |
| CAAGTTCTCGAAACAATCCA+AGG | 0.648724 | 8:+89371844 | None:intergenic |
| AAAGGCTAAACGTTACATGG+TGG | 0.692493 | 8:-89371287 | MsG0880047664.01.T01:CDS |
| AGTTCCCTATAACAGAAACC+AGG | 0.725065 | 8:+89371701 | None:intergenic |
| GTTCTCGAAACAATCCAAGG+CGG | 0.791324 | 8:+89371847 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAGCAACTAAATATATAT+AGG | + | Chr8:89372144-89372163 | None:intergenic | 15.0% |
| !! | TAAGCAACTAAATATATATA+GGG | + | Chr8:89372143-89372162 | None:intergenic | 15.0% |
| !!! | AAATATATATAGGGTAATTT+TGG | + | Chr8:89372134-89372153 | None:intergenic | 15.0% |
| ! | GCAATTTCAATGTATTCATT+AGG | - | Chr8:89371897-89371916 | MsG0880047664.01.T01:CDS | 25.0% |
| ! | TGTTCAAGAAAACTATGAAA+AGG | - | Chr8:89372226-89372245 | MsG0880047664.01.T01:CDS | 25.0% |
| ! | TTCAATGTATTCATTAGGAA+TGG | - | Chr8:89371902-89371921 | MsG0880047664.01.T01:CDS | 25.0% |
| !! | ATGTAAAACTTTTTGGACAA+TGG | - | Chr8:89371760-89371779 | MsG0880047664.01.T01:CDS | 25.0% |
| !! | TTTTTCATTTGTGTTTCCTT+TGG | - | Chr8:89371399-89371418 | MsG0880047664.01.T01:CDS | 25.0% |
| !!! | TTTGTTCCTTTTTATTTCTC+AGG | - | Chr8:89372103-89372122 | MsG0880047664.01.T01:CDS | 25.0% |
| ACAATGAATCACAAACTCTT+TGG | - | Chr8:89371460-89371479 | MsG0880047664.01.T01:CDS | 30.0% | |
| AGTAATAGATAAGCAACAGA+AGG | + | Chr8:89371504-89371523 | None:intergenic | 30.0% | |
| ATGAGAAGATATGAAATCCA+AGG | + | Chr8:89371651-89371670 | None:intergenic | 30.0% | |
| CACACAATTATGTCAATTGT+TGG | + | Chr8:89371267-89371286 | None:intergenic | 30.0% | |
| CATATAAAGAAAGGATAAGG+TGG | + | Chr8:89371553-89371572 | None:intergenic | 30.0% | |
| CCATTTCATTGTAATGATCA+AGG | - | Chr8:89372173-89372192 | MsG0880047664.01.T01:CDS | 30.0% | |
| CCTTGATCATTACAATGAAA+TGG | + | Chr8:89372176-89372195 | None:intergenic | 30.0% | |
| GAGCATATAAAGAAAGGATA+AGG | + | Chr8:89371556-89371575 | None:intergenic | 30.0% | |
| GATGAATTTGCACATCATAT+TGG | - | Chr8:89371606-89371625 | MsG0880047664.01.T01:CDS | 30.0% | |
| GCAAAAAACAAGAAATAAGC+TGG | + | Chr8:89372002-89372021 | None:intergenic | 30.0% | |
| TTAACTACATGTATACTCCT+TGG | - | Chr8:89371631-89371650 | MsG0880047664.01.T01:CDS | 30.0% | |
| ! | CTGCTTGATGTAAAACTTTT+TGG | - | Chr8:89371753-89371772 | MsG0880047664.01.T01:CDS | 30.0% |
| ! | CTGTTGCTTATCTATTACTT+TGG | - | Chr8:89371505-89371524 | MsG0880047664.01.T01:CDS | 30.0% |
| !! | TTCCTTTTTATTTCTCAGGT+AGG | - | Chr8:89372107-89372126 | MsG0880047664.01.T01:CDS | 30.0% |
| AAATGAAAAAGTAGCCTGCA+TGG | + | Chr8:89371389-89371408 | None:intergenic | 35.0% | |
| AAGTTATGACAGAAATCGGT+TGG | - | Chr8:89371865-89371884 | MsG0880047664.01.T01:CDS | 35.0% | |
| AATGGTTCACTACTGAAAAG+AGG | - | Chr8:89371778-89371797 | MsG0880047664.01.T01:CDS | 35.0% | |
| CTAAGCCAAGGAATGTTAAA+GGG | + | Chr8:89372281-89372300 | None:intergenic | 35.0% | |
| GACCTACCTGAGAAATAAAA+AGG | + | Chr8:89372112-89372131 | None:intergenic | 35.0% | |
| GATCAAGGCTTATATAATGC+AGG | - | Chr8:89372188-89372207 | MsG0880047664.01.T01:CDS | 35.0% | |
| GCACTTGAGCATATAAAGAA+AGG | + | Chr8:89371562-89371581 | None:intergenic | 35.0% | |
| GCATGGATCTTAGTTAAGAA+TGG | + | Chr8:89371372-89371391 | None:intergenic | 35.0% | |
| GCTCAAGTTATGACAGAAAT+CGG | - | Chr8:89371861-89371880 | MsG0880047664.01.T01:CDS | 35.0% | |
| TCAACCTGGTTTCTGTTATA+GGG | - | Chr8:89371826-89371845 | MsG0880047664.01.T01:CDS | 35.0% | |
| TCATTCCCTTTAACATTCCT+TGG | - | Chr8:89372273-89372292 | MsG0880047664.01.T01:CDS | 35.0% | |
| TGAAAAGGCTAAACGTTACA+TGG | - | Chr8:89372241-89372260 | MsG0880047664.01.T01:CDS | 35.0% | |
| TTCTTAACTAAGATCCATGC+AGG | - | Chr8:89371372-89371391 | MsG0880047664.01.T01:CDS | 35.0% | |
| ! | ATAGTTTTCTTGAACAGTGC+TGG | + | Chr8:89372222-89372241 | None:intergenic | 35.0% |
| AAAGGCTAAACGTTACATGG+TGG | - | Chr8:89372244-89372263 | MsG0880047664.01.T01:CDS | 40.0% | |
| AGCACTAGTAGTATTGTTCG+TGG | + | Chr8:89371295-89371314 | None:intergenic | 40.0% | |
| AGTTCCCTATAACAGAAACC+AGG | + | Chr8:89371833-89371852 | None:intergenic | 40.0% | |
| CAAGTTCTCGAAACAATCCA+AGG | + | Chr8:89371690-89371709 | None:intergenic | 40.0% | |
| CTTATATAATGCAGGCTTGC+AGG | - | Chr8:89372196-89372215 | MsG0880047664.01.T01:CDS | 40.0% | |
| CTTGCACTTTAATGCAGTGA+AGG | - | Chr8:89371584-89371603 | MsG0880047664.01.T01:CDS | 40.0% | |
| GAATCACAAACTCTTTGGCA+TGG | - | Chr8:89371465-89371484 | MsG0880047664.01.T01:CDS | 40.0% | |
| GCTAAGCCAAGGAATGTTAA+AGG | + | Chr8:89372282-89372301 | None:intergenic | 40.0% | |
| GGTTTCTGTTATAGGGAACT+TGG | - | Chr8:89371833-89371852 | MsG0880047664.01.T01:CDS | 40.0% | |
| GTCAACCTGGTTTCTGTTAT+AGG | - | Chr8:89371825-89371844 | MsG0880047664.01.T01:CDS | 40.0% | |
| TTCTGTTATAGGGAACTTGG+TGG | - | Chr8:89371836-89371855 | MsG0880047664.01.T01:CDS | 40.0% | |
| ! | ATAACAGAAACCAGGTTGAC+AGG | + | Chr8:89371825-89371844 | None:intergenic | 40.0% |
| ! | TAACAGAAACCAGGTTGACA+GGG | + | Chr8:89371824-89371843 | None:intergenic | 40.0% |
| !! | AATGTGATGGCTTGGTGATT+GGG | + | Chr8:89371338-89371357 | None:intergenic | 40.0% |
| !!! | GTTTTTTGCTGCACCAAGTA+TGG | - | Chr8:89372013-89372032 | MsG0880047664.01.T01:CDS | 40.0% |
| CAAGCTAGACTTGCCATACT+TGG | + | Chr8:89372029-89372048 | None:intergenic | 45.0% | |
| CAAGTATGGCAAGTCTAGCT+TGG | - | Chr8:89372027-89372046 | MsG0880047664.01.T01:CDS | 45.0% | |
| CTAGCTTGGAAATCCATCTC+AGG | - | Chr8:89372041-89372060 | MsG0880047664.01.T01:CDS | 45.0% | |
| GGTTGTGACTCTGAATGTGA+TGG | + | Chr8:89371351-89371370 | None:intergenic | 45.0% | |
| GTTCTCGAAACAATCCAAGG+CGG | + | Chr8:89371687-89371706 | None:intergenic | 45.0% | |
| TAGCAAAGCTTGAGCACCAA+AGG | + | Chr8:89371418-89371437 | None:intergenic | 45.0% | |
| TGACTCTGAATGTGATGGCT+TGG | + | Chr8:89371346-89371365 | None:intergenic | 45.0% | |
| ! | TTGGTGCTCAAGCTTTGCTA+TGG | - | Chr8:89371418-89371437 | MsG0880047664.01.T01:CDS | 45.0% |
| !! | GAATGTGATGGCTTGGTGAT+TGG | + | Chr8:89371339-89371358 | None:intergenic | 45.0% |
| !! | TAAGCTGGTCTTAGCACTAC+AGG | + | Chr8:89371987-89372006 | None:intergenic | 45.0% |
| AGTAGCAAACCCTGTCAACC+TGG | - | Chr8:89371812-89371831 | MsG0880047664.01.T01:CDS | 50.0% | |
| !! | GACGAGAAAAGCACCTGAGA+TGG | + | Chr8:89372057-89372076 | None:intergenic | 50.0% |
| !! | TGATGGCTTGGTGATTGGGT+GGG | + | Chr8:89371334-89371353 | None:intergenic | 50.0% |
| TGCTTCAAGCATCACCGCCT+TGG | - | Chr8:89371670-89371689 | MsG0880047664.01.T01:CDS | 55.0% | |
| !! | GTGATGGCTTGGTGATTGGG+TGG | + | Chr8:89371335-89371354 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr8 | gene | 89371243 | 89372310 | 89371243 | ID=MsG0880047664.01;Name=MsG0880047664.01 |
| Chr8 | mRNA | 89371243 | 89372310 | 89371243 | ID=MsG0880047664.01.T01;Parent=MsG0880047664.01;Name=MsG0880047664.01.T01;_AED=0.25;_eAED=0.25;_QI=0|-1|0|1|-1|1|1|0|355 |
| Chr8 | exon | 89371243 | 89372310 | 89371243 | ID=MsG0880047664.01.T01:exon:18139;Parent=MsG0880047664.01.T01 |
| Chr8 | CDS | 89371243 | 89372310 | 89371243 | ID=MsG0880047664.01.T01:cds;Parent=MsG0880047664.01.T01 |
| Gene Sequence |
| Protein sequence |
