AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280007017.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280007017.01.T01 MTR_2g019140 83.276 293 26 5 1 273 1 290 4.85e-153 431
MsG0280007017.01.T01 MTR_2g019140 78.629 248 33 4 1 231 1 245 1.46e-116 335
MsG0280007017.01.T01 MTR_6g011810 44.390 205 88 5 85 271 126 322 7.39e-43 152
MsG0280007017.01.T01 MTR_6g007030 46.231 199 91 6 80 271 106 295 9.40e-43 152
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280007017.01.T01 AT4G18370 62.150 214 61 5 89 286 92 301 1.66e-84 256
MsG0280007017.01.T01 AT4G18370 63.842 177 44 5 89 249 92 264 2.05e-69 216
MsG0280007017.01.T01 AT4G18370 62.585 147 38 4 89 222 92 234 1.06e-55 180
MsG0280007017.01.T01 AT5G39830 42.857 224 99 6 85 289 116 329 9.43e-44 154
MsG0280007017.01.T01 AT5G39830 44.175 206 87 5 85 271 116 312 1.28e-42 152
MsG0280007017.01.T01 AT3G27925 46.231 199 91 6 80 271 113 302 1.53e-42 151
MsG0280007017.01.T01 AT3G27925 46.231 199 91 6 80 271 113 302 1.53e-42 151

Find 28 sgRNAs with CRISPR-Local

Find 402 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCACCTTGTGCATTTGTTTC+AGG 0.129362 2:-9475420 MsG0280007016.01.T01:intron
TTTCAGATTCTAATTGCTTA+TGG 0.218025 2:+9475713 None:intergenic
CAGGCCTTGTAGTTGCTTCA+TGG 0.296229 2:-9475523 MsG0280007016.01.T01:intron
GAGAGGGAAAGAGGTTCATT+TGG 0.325824 2:+9475639 None:intergenic
AGAGCCATTGTCTTCAGTTC+AGG 0.390484 2:-9475542 MsG0280007016.01.T01:intron
TAACAGTGGCGGTGGTGGGA+AGG 0.413117 2:+9475585 None:intergenic
AGCTGTAACAGTGGCGGTGG+TGG 0.424772 2:+9475580 None:intergenic
AGAGAAAACATTGTGATGAT+TGG 0.430574 2:+9475662 None:intergenic
AGAATATGAGAGAACAGAAA+AGG 0.442429 2:-9475755 MsG0280007016.01.T01:intron
AACAGTGGCGGTGGTGGGAA+GGG 0.496948 2:+9475586 None:intergenic
ATGAGTAGTTAGCGTTGGAG+AGG 0.508532 2:+9475622 None:intergenic
TTAGCGTTGGAGAGGGAAAG+AGG 0.508546 2:+9475630 None:intergenic
TATCTCATTTATGTAGTGCA+TGG 0.519833 2:-9475863 MsG0280007016.01.T01:intron
GAGGAATGAGTAGTTAGCGT+TGG 0.524538 2:+9475617 None:intergenic
GGTGGGAAGGGTCTTTGTTG+AGG 0.528531 2:+9475598 None:intergenic
GCTGTAACAGTGGCGGTGGT+GGG 0.529747 2:+9475581 None:intergenic
CTGAAAGAGAAAGTGTTGTA+TGG 0.530063 2:-9475696 MsG0280007016.01.T01:intron
GTTGTGTTGAATTGAAATGA+AGG 0.536228 2:+9475492 None:intergenic
AGCTGTTGTGAAAGTGAAAG+TGG 0.549859 2:+9475470 None:intergenic
TGAGTAGTTAGCGTTGGAGA+GGG 0.552406 2:+9475623 None:intergenic
ATGAGAGAACAGAAAAGGAA+TGG 0.563912 2:-9475750 MsG0280007016.01.T01:intron
TAAGCCATGAAGCAACTACA+AGG 0.597230 2:+9475519 None:intergenic
AGTAGCTGTAACAGTGGCGG+TGG 0.634563 2:+9475577 None:intergenic
AGTGACAGTAGCTGTAACAG+TGG 0.649696 2:+9475571 None:intergenic
AAGGCCTGAACTGAAGACAA+TGG 0.665657 2:+9475538 None:intergenic
GACAGTAGCTGTAACAGTGG+CGG 0.665732 2:+9475574 None:intergenic
AAACCTGAAACAAATGCACA+AGG 0.703790 2:+9475417 None:intergenic
CCTGAAACAAATGCACAAGG+TGG 0.756569 2:+9475420 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAAACTGATATTAA+CGG - Chr2:9469759-9469778 MsG0280007016.01.T01:three_prime_UTR 10.0%
!! ATTATAAAAAAATAGTGAAA+AGG + Chr2:9470175-9470194 None:intergenic 10.0%
!! TTATAAAAAAATAGTGAAAA+GGG + Chr2:9470174-9470193 None:intergenic 10.0%
!! AAAAATAATAATCATATGTC+AGG + Chr2:9473641-9473660 None:intergenic 15.0%
!! ATTAGTAGATAAGTATAAAA+TGG - Chr2:9474720-9474739 MsG0280007016.01.T01:intron 15.0%
!! ATTTCTTAATATGTGTAAAA+TGG + Chr2:9474502-9474521 None:intergenic 15.0%
!! CAATAGTTAGTTATAAAAAT+TGG + Chr2:9473708-9473727 None:intergenic 15.0%
!!! ATTTTTTTATAATGTAGTGT+TGG - Chr2:9470182-9470201 MsG0280007016.01.T01:intron 15.0%
!!! ATTTTTTTCAAATGTGATAT+AGG - Chr2:9475163-9475182 MsG0280007016.01.T01:intron 15.0%
!!! TATTATATTTCTATAGTTCA+TGG - Chr2:9470570-9470589 MsG0280007016.01.T01:intron 15.0%
!!! TCTTGAACTAATTTTTTTTT+GGG - Chr2:9470314-9470333 MsG0280007016.01.T01:intron 15.0%
!!! TTCTTGAACTAATTTTTTTT+TGG - Chr2:9470313-9470332 MsG0280007016.01.T01:intron 15.0%
!!! TTTAATCAAATTTTGCAATT+GGG - Chr2:9470255-9470274 MsG0280007016.01.T01:intron 15.0%
!!! TTTTTTTATAATGTAGTGTT+GGG - Chr2:9470183-9470202 MsG0280007016.01.T01:intron 15.0%
!!! TTTTTTTCAAATGTGATATA+GGG - Chr2:9475164-9475183 MsG0280007016.01.T01:intron 15.0%
!! AAAATGACTTTCACATATTT+GGG + Chr2:9472244-9472263 None:intergenic 20.0%
!! AAAGTAAAATTCACAAAAGT+AGG + Chr2:9473856-9473875 None:intergenic 20.0%
!! AATAATTAGTGCATGATAAT+AGG - Chr2:9473568-9473587 MsG0280007016.01.T01:intron 20.0%
!! ACAAAAACAAACCATTAATT+TGG + Chr2:9470628-9470647 None:intergenic 20.0%
!! ACCAAAACAAAACAAAAAAA+AGG + Chr2:9472735-9472754 None:intergenic 20.0%
!! ATAAGATAATTACTCTACTA+TGG + Chr2:9471598-9471617 None:intergenic 20.0%
!! ATAATTAGTGCATGATAATA+GGG - Chr2:9473569-9473588 MsG0280007016.01.T01:intron 20.0%
!! ATACAAAGCTGATAAAAAAA+TGG + Chr2:9472475-9472494 None:intergenic 20.0%
!! ATTAATGAATAGAAAAGAAG+AGG + Chr2:9472123-9472142 None:intergenic 20.0%
!! GACTTATTTGTAAAGAAATT+AGG - Chr2:9473438-9473457 MsG0280007016.01.T01:intron 20.0%
!! GATTAAAAAAAGAAAGAGAA+TGG - Chr2:9474524-9474543 MsG0280007016.01.T01:intron 20.0%
!! TGTAACTAACTATTGATATA+TGG - Chr2:9473775-9473794 MsG0280007016.01.T01:intron 20.0%
!! TTAAATGTAATCATATGTGT+CGG - Chr2:9470844-9470863 MsG0280007016.01.T01:intron 20.0%
!! TTTCAAAACCTATTAGTATA+AGG + Chr2:9475752-9475771 None:intergenic 20.0%
!!! ACATAAGAAAATTCACTTTT+TGG - Chr2:9474948-9474967 MsG0280007016.01.T01:intron 20.0%
!!! ATCAAACTTCTTATTTTAGA+TGG - Chr2:9471950-9471969 MsG0280007016.01.T01:intron 20.0%
!!! ATCTAAAATAAGAAGTTTGA+TGG + Chr2:9471951-9471970 None:intergenic 20.0%
!!! ATTTTCATTCTTTTGATATG+TGG - Chr2:9470666-9470685 MsG0280007016.01.T01:intron 20.0%
!!! GTTTAATCAAATTTTGCAAT+TGG - Chr2:9470254-9470273 MsG0280007016.01.T01:intron 20.0%
!!! TAATAATATATGGTTCTGTT+TGG + Chr2:9475076-9475095 None:intergenic 20.0%
!!! TCCTTTTTTTTGTTTTGTTT+TGG - Chr2:9472731-9472750 MsG0280007016.01.T01:intron 20.0%
!!! TGAAGCTTATATTTTAAACA+GGG - Chr2:9475030-9475049 MsG0280007016.01.T01:intron 20.0%
!!! TTCCTTAATTTTAATCCATA+GGG + Chr2:9474440-9474459 None:intergenic 20.0%
!!! TTTCCTTAATTTTAATCCAT+AGG + Chr2:9474441-9474460 None:intergenic 20.0%
!!! TTTTCTCATTAAGTTTAGAA+GGG - Chr2:9474771-9474790 MsG0280007016.01.T01:intron 20.0%
!!! TTTTTCTCATTAAGTTTAGA+AGG - Chr2:9474770-9474789 MsG0280007016.01.T01:intron 20.0%
! AAAGACTATATCTATGTCAT+GGG + Chr2:9471775-9471794 None:intergenic 25.0%
! AAAGTGAAAAACAATAGGTT+AGG - Chr2:9474602-9474621 MsG0280007016.01.T01:intron 25.0%
! AACAAGCAGAATCAAATTAA+AGG + Chr2:9471362-9471381 None:intergenic 25.0%
! AACAGAGAAATCAAAATGTT+CGG + Chr2:9472152-9472171 None:intergenic 25.0%
! AACATAAAGAACCACAAATA+AGG + Chr2:9474383-9474402 None:intergenic 25.0%
! AATGAAATAAGATGTAACAC+CGG - Chr2:9473204-9473223 MsG0280007016.01.T01:intron 25.0%
! AATGCAAAGTGAAAAACAAT+AGG - Chr2:9474597-9474616 MsG0280007016.01.T01:intron 25.0%
! ACAAGCAGAATCAAATTAAA+GGG + Chr2:9471361-9471380 None:intergenic 25.0%
! ACATAAAGAACCACAAATAA+GGG + Chr2:9474382-9474401 None:intergenic 25.0%
! ACCTTGAAAGTTTGAAAAAA+TGG + Chr2:9471812-9471831 None:intergenic 25.0%
! ACGCAAATGAAGTATAAATA+TGG + Chr2:9475489-9475508 None:intergenic 25.0%
! AGTCAATTCAATGTCTTTAA+TGG + Chr2:9471190-9471209 None:intergenic 25.0%
! ATAAAGAAACCAACTTACTA+GGG + Chr2:9472845-9472864 None:intergenic 25.0%
! ATAAGATGAAGAATACAGAA+TGG + Chr2:9473295-9473314 None:intergenic 25.0%
! ATAATTTGACAAACTATCTC+AGG - Chr2:9471736-9471755 MsG0280007016.01.T01:intron 25.0%
! ATATTATTAGAGAGTTCGAT+TGG - Chr2:9475087-9475106 MsG0280007016.01.T01:intron 25.0%
! ATCCTTCATCTATAACTATT+TGG + Chr2:9474117-9474136 None:intergenic 25.0%
! ATGAAGTATAAATATGGGAA+AGG + Chr2:9475483-9475502 None:intergenic 25.0%
! ATTAAGCATTTGATTATCAC+AGG - Chr2:9471143-9471162 MsG0280007016.01.T01:intron 25.0%
! CAATTCACAATTCAGAAAAT+AGG - Chr2:9472653-9472672 MsG0280007016.01.T01:intron 25.0%
! CGCAAATGAAGTATAAATAT+GGG + Chr2:9475488-9475507 None:intergenic 25.0%
! CTCAAAATAATACAAGAATC+AGG + Chr2:9472533-9472552 None:intergenic 25.0%
! GAAAAACTGTTTGAAAACAT+TGG - Chr2:9471681-9471700 MsG0280007016.01.T01:intron 25.0%
! GAAAATGACTTTCACATATT+TGG + Chr2:9472245-9472264 None:intergenic 25.0%
! GAATCTAAGAATTTACATGT+TGG - Chr2:9473949-9473968 MsG0280007016.01.T01:intron 25.0%
! GCGATAATGAAAATACATAA+TGG + Chr2:9474576-9474595 None:intergenic 25.0%
! GGAAGAAACATATGTAATAT+TGG - Chr2:9471971-9471990 MsG0280007016.01.T01:intron 25.0%
! GTCTTATCATATTAAGTGTT+TGG - Chr2:9472937-9472956 MsG0280007016.01.T01:intron 25.0%
! TAAAGACTATATCTATGTCA+TGG + Chr2:9471776-9471795 None:intergenic 25.0%
! TACACGATAAAATACAATGA+AGG + Chr2:9475442-9475461 None:intergenic 25.0%
! TAGAACCTTACACTAATATT+GGG + Chr2:9472783-9472802 None:intergenic 25.0%
! TAGTTCATGAACTAAATTGA+CGG - Chr2:9470523-9470542 MsG0280007016.01.T01:intron 25.0%
! TATAAGCTCATATGACAAAA+AGG + Chr2:9474905-9474924 None:intergenic 25.0%
! TCGAACTCTCTAATAATATA+TGG + Chr2:9475086-9475105 None:intergenic 25.0%
! TGATATTAAGCAACAAACTA+TGG - Chr2:9472299-9472318 MsG0280007016.01.T01:intron 25.0%
! TGTATCATTTGATTCACAAT+AGG - Chr2:9472625-9472644 MsG0280007016.01.T01:intron 25.0%
! TTAGAACCTTACACTAATAT+TGG + Chr2:9472784-9472803 None:intergenic 25.0%
! TTCATCATTTAATGAGTATG+TGG - Chr2:9474971-9474990 MsG0280007016.01.T01:intron 25.0%
! TTGTAATACATGTTGTCATT+TGG + Chr2:9473413-9473432 None:intergenic 25.0%
! TTTATATTCAAGTCGTGAAT+CGG + Chr2:9472683-9472702 None:intergenic 25.0%
! TTTCAGATTCTAATTGCTTA+TGG + Chr2:9469837-9469856 None:intergenic 25.0%
!! GTTACATCTTATTTCATTCT+TGG + Chr2:9473202-9473221 None:intergenic 25.0%
!! TACTGAAATCTAAAACAAGA+TGG + Chr2:9475261-9475280 None:intergenic 25.0%
!! TTCTTTTGGCATTTGATAAA+TGG - Chr2:9472507-9472526 MsG0280007016.01.T01:intron 25.0%
!! TTTTGCTTTCAATCTAATTC+AGG - Chr2:9475641-9475660 MsG0280007016.01.T01:intron 25.0%
!!! ACAAAGTATTTTTACAGCTA+AGG + Chr2:9473818-9473837 None:intergenic 25.0%
!!! ATTTCTAGACTTCAATTTTG+TGG + Chr2:9475575-9475594 None:intergenic 25.0%
!!! CAAAGTATTTTTACAGCTAA+GGG + Chr2:9473817-9473836 None:intergenic 25.0%
!!! CATGTAATCAACTTTTTTTG+TGG - Chr2:9475775-9475794 MsG0280007016.01.T01:intron 25.0%
!!! CTGATTCTTGTATTATTTTG+AGG - Chr2:9472531-9472550 MsG0280007016.01.T01:intron 25.0%
!!! GTCATTTGTTTTTTTTCTTC+TGG - Chr2:9471833-9471852 MsG0280007016.01.T01:intron 25.0%
!!! GTGAAGCTTATATTTTAAAC+AGG - Chr2:9475029-9475048 MsG0280007016.01.T01:intron 25.0%
!!! TATTGTTTTTCACTTTGCAT+TGG + Chr2:9474598-9474617 None:intergenic 25.0%
!!! TTGTTTTTCATCTTACTATG+TGG + Chr2:9471311-9471330 None:intergenic 25.0%
AAACTGTACAATGTAACCAA+CGG - Chr2:9475198-9475217 MsG0280007016.01.T01:intron 30.0%
AAAGCTGATAAAAAAATGGC+CGG + Chr2:9472471-9472490 None:intergenic 30.0%
AACAGGGATAAACTAGAAAA+TGG - Chr2:9475046-9475065 MsG0280007016.01.T01:intron 30.0%
AATGAAGCACAGATACTATT+CGG + Chr2:9470915-9470934 None:intergenic 30.0%
ACACTAATATTGGGAATCAA+AGG + Chr2:9472774-9472793 None:intergenic 30.0%
ACAGAGAAATCAAAATGTTC+GGG + Chr2:9472151-9472170 None:intergenic 30.0%
ACTGTGAATACCTAAATGTA+AGG - Chr2:9471704-9471723 MsG0280007016.01.T01:intron 30.0%
AGAATATGAGAGAACAGAAA+AGG - Chr2:9469792-9469811 MsG0280007016.01.T01:exon 30.0%
AGAGAAAACATTGTGATGAT+TGG + Chr2:9469888-9469907 None:intergenic 30.0%
AGGTGTTCCATATACAATAA+GGG + Chr2:9475732-9475751 None:intergenic 30.0%
ATCAAATGCCAAAAGAAAAG+TGG + Chr2:9472504-9472523 None:intergenic 30.0%
ATCAGCTAATATGGAATATC+CGG + Chr2:9473226-9473245 None:intergenic 30.0%
ATGACATTTGATCTATTTGC+AGG - Chr2:9473885-9473904 MsG0280007016.01.T01:intron 30.0%
ATGGAACACCTTATACTAAT+AGG - Chr2:9475741-9475760 MsG0280007016.01.T01:intron 30.0%
ATTGGTACCCAATATTAGTT+GGG + Chr2:9470343-9470362 None:intergenic 30.0%
CAAGCAGAATCAAATTAAAG+GGG + Chr2:9471360-9471379 None:intergenic 30.0%
CATAAAGAAACCAACTTACT+AGG + Chr2:9472846-9472865 None:intergenic 30.0%
CTTCTTCTCGTCATATAAAA+GGG + Chr2:9473123-9473142 None:intergenic 30.0%
GAAATAAAGCCTGTTGTTAT+TGG - Chr2:9473925-9473944 MsG0280007016.01.T01:intron 30.0%
GAGTTTATACTTCTATCTGT+AGG - Chr2:9471993-9472012 MsG0280007016.01.T01:intron 30.0%
GATGAAAAACAAATCAGAAG+AGG - Chr2:9471319-9471338 MsG0280007016.01.T01:intron 30.0%
GTGATTCGTTACAATGAATT+AGG + Chr2:9472430-9472449 None:intergenic 30.0%
GTTGTGTTGAATTGAAATGA+AGG + Chr2:9470058-9470077 None:intergenic 30.0%
TAGGTTAGAGACCAAATTAA+TGG - Chr2:9470614-9470633 MsG0280007016.01.T01:intron 30.0%
TCACAATAAGCATAAAGGAA+GGG - Chr2:9473507-9473526 MsG0280007016.01.T01:intron 30.0%
TCAGATAAAACAAAATCGCT+TGG - Chr2:9474203-9474222 MsG0280007016.01.T01:intron 30.0%
TCCTTTATGCTTATTGTGAA+AGG + Chr2:9473506-9473525 None:intergenic 30.0%
TCCTTTCACAATAAGCATAA+AGG - Chr2:9473502-9473521 MsG0280007016.01.T01:intron 30.0%
TCTAATGAAAGTTTACCATG+TGG + Chr2:9474056-9474075 None:intergenic 30.0%
TCTTCTTCTCGTCATATAAA+AGG + Chr2:9473124-9473143 None:intergenic 30.0%
TCTTTAATGGAAACAACAGA+TGG + Chr2:9471177-9471196 None:intergenic 30.0%
TGAAAGCAAAACATTCTTGA+AGG + Chr2:9475632-9475651 None:intergenic 30.0%
TGAATAGAAAAGAAGAGGAT+TGG + Chr2:9472118-9472137 None:intergenic 30.0%
TGACACTAATATCTAGATAC+TGG + Chr2:9471540-9471559 None:intergenic 30.0%
TGATTCCCAATATTAGTGTA+AGG - Chr2:9472775-9472794 MsG0280007016.01.T01:intron 30.0%
TGCCAAATAGTTATAGATGA+AGG - Chr2:9474112-9474131 MsG0280007016.01.T01:intron 30.0%
TTAGATTCACCAATAACAAC+AGG + Chr2:9473937-9473956 None:intergenic 30.0%
TTATGCGATGTAAATTATGC+AGG - Chr2:9474259-9474278 MsG0280007016.01.T01:CDS 30.0%
TTCACAATAAGCATAAAGGA+AGG - Chr2:9473506-9473525 MsG0280007016.01.T01:intron 30.0%
TTGCTTTCAAGATGTTGTAA+TGG - Chr2:9471629-9471648 MsG0280007016.01.T01:CDS 30.0%
TTTAGCATTCATTGTGTATG+TGG + Chr2:9475009-9475028 None:intergenic 30.0%
TTTAGCTACAACATGGTAAT+TGG + Chr2:9471870-9471889 None:intergenic 30.0%
TTTATATGACGAGAAGAAGA+GGG - Chr2:9473124-9473143 MsG0280007016.01.T01:intron 30.0%
TTTCAATCTAATTCAGGTAC+CGG - Chr2:9475647-9475666 MsG0280007016.01.T01:intron 30.0%
! AAGGTGTTCCATATACAATA+AGG + Chr2:9475733-9475752 None:intergenic 30.0%
! AAGTAACACTTTTGATGTTG+GGG - Chr2:9470701-9470720 MsG0280007016.01.T01:intron 30.0%
! AAGTTTAAAACCAATGCATG+TGG - Chr2:9471015-9471034 MsG0280007016.01.T01:intron 30.0%
! AATACATGTTGTCATTTGGA+AGG + Chr2:9473409-9473428 None:intergenic 30.0%
! AATACGACGCTTTAGATTAA+AGG - Chr2:9471420-9471439 MsG0280007016.01.T01:intron 30.0%
! ACTTCATTAGAAGAGGTTTT+GGG + Chr2:9471219-9471238 None:intergenic 30.0%
! AGAGTATTCTCATATCCATA+AGG + Chr2:9474000-9474019 None:intergenic 30.0%
! CATCTTATTTCATTCTTGGA+CGG + Chr2:9473198-9473217 None:intergenic 30.0%
! GAAGTAACACTTTTGATGTT+GGG - Chr2:9470700-9470719 MsG0280007016.01.T01:intron 30.0%
! GGGTCATGAACTTTAAAAAT+AGG - Chr2:9470275-9470294 MsG0280007016.01.T01:intron 30.0%
! TATGACAAAAAGGACTTGTT+TGG + Chr2:9474895-9474914 None:intergenic 30.0%
! TCTAAGACCTCAGATAATTT+AGG - Chr2:9472999-9473018 MsG0280007016.01.T01:intron 30.0%
! TGAAGTAACACTTTTGATGT+TGG - Chr2:9470699-9470718 MsG0280007016.01.T01:intron 30.0%
! TGCCCTATGGATTAAAATTA+AGG - Chr2:9474435-9474454 MsG0280007016.01.T01:intron 30.0%
! TTTTATATGACGAGAAGAAG+AGG - Chr2:9473123-9473142 MsG0280007016.01.T01:intron 30.0%
!! AAGTGTTACTTCAACACATT+TGG + Chr2:9470692-9470711 None:intergenic 30.0%
!! AATGTGATATAGGGAGTATT+TGG - Chr2:9475173-9475192 MsG0280007016.01.T01:intron 30.0%
!! ATAACCAACCACTTTTCTTT+TGG - Chr2:9472493-9472512 MsG0280007016.01.T01:intron 30.0%
!! ATGAGTATGTGGTTCTAATA+TGG - Chr2:9474982-9475001 MsG0280007016.01.T01:intron 30.0%
!! ATGGTCAACAATTCTGAAAT+TGG - Chr2:9473541-9473560 MsG0280007016.01.T01:intron 30.0%
!! CTAGTAAGTTGGTTTCTTTA+TGG - Chr2:9472844-9472863 MsG0280007016.01.T01:intron 30.0%
!! GAAAGCGTTGTTAAAATTAG+TGG - Chr2:9474693-9474712 MsG0280007016.01.T01:intron 30.0%
!! GACGGATTGAAAATAGTTTA+GGG - Chr2:9470541-9470560 MsG0280007016.01.T01:intron 30.0%
!! TGACGGATTGAAAATAGTTT+AGG - Chr2:9470540-9470559 MsG0280007016.01.T01:intron 30.0%
!!! ACAGACAGTTTTTTCTTACA+GGG + Chr2:9472919-9472938 None:intergenic 30.0%
!!! GCCATTTTTTCAAACTTTCA+AGG - Chr2:9471808-9471827 MsG0280007016.01.T01:intron 30.0%
AAACCTGAAACAAATGCACA+AGG + Chr2:9470133-9470152 None:intergenic 35.0%
AAATGCAGGCATTTGCTTTA+TGG - Chr2:9472872-9472891 MsG0280007016.01.T01:intron 35.0%
AAGAATACAGAATGGCAGAT+CGG + Chr2:9473287-9473306 None:intergenic 35.0%
AAGACCTCAGATAATTTAGG+AGG - Chr2:9473002-9473021 MsG0280007016.01.T01:intron 35.0%
AATCACCATTTCGTATGTGT+TGG + Chr2:9471105-9471124 None:intergenic 35.0%
AATGCCAAAAGAAAAGTGGT+TGG + Chr2:9472500-9472519 None:intergenic 35.0%
AATGTAATCATATGTGTCGG+TGG - Chr2:9470847-9470866 MsG0280007016.01.T01:intron 35.0%
ACCATTACTTACAATACTCC+TGG - Chr2:9473335-9473354 MsG0280007016.01.T01:intron 35.0%
ACGTTGTAAACCACTAGTAT+CGG + Chr2:9471900-9471919 None:intergenic 35.0%
ACTTCTAATTACAGAGTCGA+TGG + Chr2:9475702-9475721 None:intergenic 35.0%
AGAACAGCTAGATCATATGA+TGG + Chr2:9472080-9472099 None:intergenic 35.0%
AGATACACGCTAACATCAAT+TGG + Chr2:9472381-9472400 None:intergenic 35.0%
AGATGAAGGATGAAAATCTG+TGG - Chr2:9474126-9474145 MsG0280007016.01.T01:intron 35.0%
AGCAAGTTCACAACATTGAA+AGG + Chr2:9473482-9473501 None:intergenic 35.0%
AGCATATAGAAGAATCCAAC+AGG + Chr2:9472178-9472197 None:intergenic 35.0%
AGTCCTATGATCAGAAGTAA+AGG + Chr2:9475292-9475311 None:intergenic 35.0%
AGTTCATGAACTAAACCCTA+GGG + Chr2:9470516-9470535 None:intergenic 35.0%
ATAGGTCACAACTACAATTG+TGG + Chr2:9470755-9470774 None:intergenic 35.0%
ATATCCATAAGGATTCCCAA+TGG + Chr2:9473989-9474008 None:intergenic 35.0%
ATATGATCTAGCTGTTCTGA+AGG - Chr2:9472082-9472101 MsG0280007016.01.T01:intron 35.0%
ATCATATTAAGTGTTTGGCC+AGG - Chr2:9472942-9472961 MsG0280007016.01.T01:intron 35.0%
ATCTGCCTTAATACTACACA+AGG - Chr2:9472967-9472986 MsG0280007016.01.T01:intron 35.0%
ATGAGAATACTCTCACAACA+GGG - Chr2:9474007-9474026 MsG0280007016.01.T01:intron 35.0%
ATGAGAGAACAGAAAAGGAA+TGG - Chr2:9469797-9469816 MsG0280007016.01.T01:exon 35.0%
ATGTTAACAGGAAATTCAGG+CGG - Chr2:9475342-9475361 MsG0280007016.01.T01:intron 35.0%
ATTTGGGCATGTTATGGTAA+TGG + Chr2:9472228-9472247 None:intergenic 35.0%
CAAATTGGAGAGACAATGAT+AGG - Chr2:9470595-9470614 MsG0280007016.01.T01:intron 35.0%
CATCCTTTACTTCTGATCAT+AGG - Chr2:9475286-9475305 MsG0280007016.01.T01:intron 35.0%
CTATAGTTCATGGACCAAAT+TGG - Chr2:9470580-9470599 MsG0280007016.01.T01:intron 35.0%
CTATCATTGTCTCTCCAATT+TGG + Chr2:9470597-9470616 None:intergenic 35.0%
CTATGATCAGAAGTAAAGGA+TGG + Chr2:9475288-9475307 None:intergenic 35.0%
CTTCTAATTACAGAGTCGAT+GGG + Chr2:9475701-9475720 None:intergenic 35.0%
GATACACGCTAACATCAATT+GGG + Chr2:9472380-9472399 None:intergenic 35.0%
GATTGGTACCCAATATTAGT+TGG + Chr2:9470344-9470363 None:intergenic 35.0%
GTACCATCCCTTATTGTATA+TGG - Chr2:9475722-9475741 MsG0280007016.01.T01:intron 35.0%
GTGCTTTCAATTCAATGAAG+TGG - Chr2:9471651-9471670 MsG0280007016.01.T01:intron 35.0%
GTTCCATATACAATAAGGGA+TGG + Chr2:9475728-9475747 None:intergenic 35.0%
GTTTCCTCCTAAATTATCTG+AGG + Chr2:9473009-9473028 None:intergenic 35.0%
TAATGAAGTCATGCTAGATG+AGG - Chr2:9471230-9471249 MsG0280007016.01.T01:CDS 35.0%
TACAGTTGCATCAGCTAATA+TGG + Chr2:9473235-9473254 None:intergenic 35.0%
TAGCATGACTTCATTAGAAG+AGG + Chr2:9471226-9471245 None:intergenic 35.0%
TAGTGGTTTACAACGTTGTA+AGG - Chr2:9471904-9471923 MsG0280007016.01.T01:intron 35.0%
TAGTTCATGAACTAAACCCT+AGG + Chr2:9470517-9470536 None:intergenic 35.0%
TATGAGAATACTCTCACAAC+AGG - Chr2:9474006-9474025 MsG0280007016.01.T01:intron 35.0%
TCACATATTTGGGCATGTTA+TGG + Chr2:9472234-9472253 None:intergenic 35.0%
TCATATTACCTTTCCTGTGA+AGG + Chr2:9475415-9475434 None:intergenic 35.0%
TCTTTATGGCACAAAAATGC+AGG - Chr2:9472858-9472877 MsG0280007016.01.T01:intron 35.0%
TGACCCAATACAAGAATTGT+TGG - Chr2:9470416-9470435 MsG0280007016.01.T01:intron 35.0%
TGATGGAATTATCAGCACAA+GGG + Chr2:9471934-9471953 None:intergenic 35.0%
TGGGAAACCCAACTAATATT+GGG - Chr2:9470333-9470352 MsG0280007016.01.T01:intron 35.0%
TTATATGACGAGAAGAAGAG+GGG - Chr2:9473125-9473144 MsG0280007016.01.T01:intron 35.0%
TTGATGGAATTATCAGCACA+AGG + Chr2:9471935-9471954 None:intergenic 35.0%
TTGGGAAACCCAACTAATAT+TGG - Chr2:9470332-9470351 MsG0280007016.01.T01:intron 35.0%
TTGGTCCTTGTGTAGTATTA+AGG + Chr2:9472975-9472994 None:intergenic 35.0%
TTGTGTAGTATTAAGGCAGA+TGG + Chr2:9472968-9472987 None:intergenic 35.0%
! AGTAACACTTTTGATGTTGG+GGG - Chr2:9470702-9470721 MsG0280007016.01.T01:intron 35.0%
! ATCTGAGGTCTTAGAATACT+TGG + Chr2:9472994-9473013 None:intergenic 35.0%
! CAAAGGGAATAACTTTTCCA+GGG - Chr2:9472032-9472051 MsG0280007016.01.T01:intron 35.0%
! CACTTTAAAGGACTTTGCAA+CGG + Chr2:9470948-9470967 None:intergenic 35.0%
! CTTCATTAGAAGAGGTTTTG+GGG + Chr2:9471218-9471237 None:intergenic 35.0%
! CTTTAGATTAAAGGTTGGTC+CGG - Chr2:9471429-9471448 MsG0280007016.01.T01:intron 35.0%
! CTTTGTTTGGTAAAAGGTAG+CGG - Chr2:9474640-9474659 MsG0280007016.01.T01:intron 35.0%
! GACTTCATTAGAAGAGGTTT+TGG + Chr2:9471220-9471239 None:intergenic 35.0%
! GGAACTAAACATTTGTTGCA+AGG + Chr2:9472714-9472733 None:intergenic 35.0%
! GGCTTCATTTGGGATAAATT+TGG - Chr2:9471285-9471304 MsG0280007016.01.T01:intron 35.0%
! GTAAGCTATACCCTTATTTG+TGG - Chr2:9474369-9474388 MsG0280007016.01.T01:CDS 35.0%
! TAGCTAGTTTAGCTACAACA+TGG + Chr2:9471877-9471896 None:intergenic 35.0%
! TGGAGAATTCTAAGAAGCAT+TGG + Chr2:9475241-9475260 None:intergenic 35.0%
! TTTTCTTACAGGGACAGAAT+AGG + Chr2:9472909-9472928 None:intergenic 35.0%
!! ACCAGGAGTATTGTAAGTAA+TGG + Chr2:9473339-9473358 None:intergenic 35.0%
!! AGAATTCTAAGAAGCATTGG+GGG + Chr2:9475238-9475257 None:intergenic 35.0%
!! CTGAAAGAGAAAGTGTTGTA+TGG - Chr2:9469851-9469870 MsG0280007016.01.T01:CDS 35.0%
!! CTTGTTAAGTTGAATCCACA+TGG - Chr2:9474038-9474057 MsG0280007016.01.T01:intron 35.0%
!! GAGAATTCTAAGAAGCATTG+GGG + Chr2:9475239-9475258 None:intergenic 35.0%
!! GGAGAATTCTAAGAAGCATT+GGG + Chr2:9475240-9475259 None:intergenic 35.0%
!! GTTTAGAGTTCCTCTTTTCA+AGG - Chr2:9473078-9473097 MsG0280007016.01.T01:intron 35.0%
!! TATGGTAATGGATTGGAAAG+TGG + Chr2:9472216-9472235 None:intergenic 35.0%
!! TATTTGCAGGTTGATGTTGA+TGG - Chr2:9473898-9473917 MsG0280007016.01.T01:intron 35.0%
!! TTTTCCTAGTTGATGCCAAA+GGG - Chr2:9472016-9472035 MsG0280007016.01.T01:intron 35.0%
!!! GACAGACAGTTTTTTCTTAC+AGG + Chr2:9472920-9472939 None:intergenic 35.0%
!!! TTTTTTTTCTTCTGGTGCAC+AGG - Chr2:9471841-9471860 MsG0280007016.01.T01:intron 35.0%
AAACTAGCTACCGATACTAG+TGG - Chr2:9471887-9471906 MsG0280007016.01.T01:intron 40.0%
ACTGATGCAGCTATTAATGC+AGG - Chr2:9474347-9474366 MsG0280007016.01.T01:CDS 40.0%
AGAGTTCTTAGCAGATTCAG+AGG + Chr2:9474082-9474101 None:intergenic 40.0%
AGCTGTTGTGAAAGTGAAAG+TGG + Chr2:9470080-9470099 None:intergenic 40.0%
ATACAAGAATTGTTGGCGCA+TGG - Chr2:9470423-9470442 MsG0280007016.01.T01:intron 40.0%
ATCAACTAGAGGCCTAATTG+AGG - Chr2:9470369-9470388 MsG0280007016.01.T01:intron 40.0%
ATCACAGACATGGAAAGACA+CGG - Chr2:9470783-9470802 MsG0280007016.01.T01:intron 40.0%
ATCGAAAGACCCTAGTAAGT+TGG - Chr2:9472833-9472852 MsG0280007016.01.T01:intron 40.0%
ATGAAACACGATCACAGACA+TGG - Chr2:9470773-9470792 MsG0280007016.01.T01:intron 40.0%
ATGAACTAAACCCTAGGGAT+TGG + Chr2:9470511-9470530 None:intergenic 40.0%
CAACGATATGTTTCGAACAC+CGG + Chr2:9471451-9471470 None:intergenic 40.0%
CAATTGTGGTCGCACTTTAA+AGG + Chr2:9470960-9470979 None:intergenic 40.0%
CCAACAAATGCTTGGTATTG+AGG + Chr2:9474410-9474429 None:intergenic 40.0%
CCAGGGAAGGGAAAATAATT+GGG - Chr2:9472049-9472068 MsG0280007016.01.T01:intron 40.0%
CCTCAATACCAAGCATTTGT+TGG - Chr2:9474407-9474426 MsG0280007016.01.T01:intron 40.0%
CCTGGAAAAGTTATTCCCTT+TGG + Chr2:9472034-9472053 None:intergenic 40.0%
CGGATGTTAACAGGAAATTC+AGG - Chr2:9475339-9475358 MsG0280007016.01.T01:intron 40.0%
CTATCTACACTTAGTGTAGC+CGG - Chr2:9472449-9472468 MsG0280007016.01.T01:intron 40.0%
CTGTGTTTACTCCAACAACA+TGG + Chr2:9475389-9475408 None:intergenic 40.0%
GATAATTTAGGAGGAAACCC+TGG - Chr2:9473011-9473030 MsG0280007016.01.T01:intron 40.0%
GATGAAGATGCAAAAGTGGA+AGG - Chr2:9471252-9471271 MsG0280007016.01.T01:CDS 40.0%
GATTTCTCTGTTACTCCTGT+TGG - Chr2:9472160-9472179 MsG0280007016.01.T01:intron 40.0%
GCACAGATACTATTCGGATT+AGG + Chr2:9470909-9470928 None:intergenic 40.0%
GCGCCAACAATTCTTGTATT+GGG + Chr2:9470422-9470441 None:intergenic 40.0%
GTTCTCCAACACATACGAAA+TGG - Chr2:9471097-9471116 MsG0280007016.01.T01:intron 40.0%
TAAATTATGCAGGTGGTCAG+TGG - Chr2:9474269-9474288 MsG0280007016.01.T01:CDS 40.0%
TAAGCCATGAAGCAACTACA+AGG + Chr2:9470031-9470050 None:intergenic 40.0%
TACAAGAATTGTTGGCGCAT+GGG - Chr2:9470424-9470443 MsG0280007016.01.T01:intron 40.0%
TAGCTGATGCAACTGTACTA+TGG - Chr2:9473238-9473257 MsG0280007016.01.T01:intron 40.0%
TATTACCTTTCCTGTGAAGG+TGG + Chr2:9475412-9475431 None:intergenic 40.0%
TATTCCCTTTGGCATCAACT+AGG + Chr2:9472023-9472042 None:intergenic 40.0%
TCAATTAGGCCTCTAGTTGA+TGG + Chr2:9470370-9470389 None:intergenic 40.0%
TCCAGGGAAGGGAAAATAAT+TGG - Chr2:9472048-9472067 MsG0280007016.01.T01:intron 40.0%
TGAGGATGAAGATGCAAAAG+TGG - Chr2:9471248-9471267 MsG0280007016.01.T01:CDS 40.0%
TGCATACGTGCCTTACATTT+AGG + Chr2:9471717-9471736 None:intergenic 40.0%
TGCGATGTAAATTATGCAGG+TGG - Chr2:9474262-9474281 MsG0280007016.01.T01:CDS 40.0%
TGCGCCAACAATTCTTGTAT+TGG + Chr2:9470423-9470442 None:intergenic 40.0%
TGTAAAATGGTCAAACGCGA+CGG + Chr2:9474489-9474508 None:intergenic 40.0%
TGTCTGTGATCGTGTTTCAT+AGG + Chr2:9470773-9470792 None:intergenic 40.0%
TGTTTGTTCTCGCCTCAATT+AGG + Chr2:9470384-9470403 None:intergenic 40.0%
TTAGACAGGTTAGAAGGACA+GGG + Chr2:9473673-9473692 None:intergenic 40.0%
TTGACTGTAACCACATGTGT+CGG + Chr2:9471492-9471511 None:intergenic 40.0%
TTGTCAATCTCCACATGCAT+TGG + Chr2:9471028-9471047 None:intergenic 40.0%
TTTGCCATTGGGAATCCTTA+TGG - Chr2:9473982-9474001 MsG0280007016.01.T01:intron 40.0%
! AGGAAGGGAACACATTTTCA+TGG - Chr2:9473522-9473541 MsG0280007016.01.T01:intron 40.0%
! CCAAAGGGAATAACTTTTCC+AGG - Chr2:9472031-9472050 MsG0280007016.01.T01:intron 40.0%
! CGACGCTTTAGATTAAAGGT+TGG - Chr2:9471424-9471443 MsG0280007016.01.T01:intron 40.0%
! GGAATAACTTTTCCAGGGAA+GGG - Chr2:9472037-9472056 MsG0280007016.01.T01:intron 40.0%
!! AAGGTAGCGGATAGTTAACA+AGG - Chr2:9474653-9474672 MsG0280007016.01.T01:intron 40.0%
!! CGCAAGCTTTGTTTGGTAAA+AGG - Chr2:9474634-9474653 MsG0280007016.01.T01:intron 40.0%
!! GGCATGTTATGGTAATGGAT+TGG + Chr2:9472223-9472242 None:intergenic 40.0%
!! GTTTTCCTAGTTGATGCCAA+AGG - Chr2:9472015-9472034 MsG0280007016.01.T01:intron 40.0%
AAGGCCTGAACTGAAGACAA+TGG + Chr2:9470012-9470031 None:intergenic 45.0%
ACACGACCAAATGAGCTAAC+GGG - Chr2:9473054-9473073 MsG0280007016.01.T01:intron 45.0%
AGAGCCATTGTCTTCAGTTC+AGG - Chr2:9470005-9470024 MsG0280007016.01.T01:intron 45.0%
AGATACCTTCCCCAAATGGA+GGG - Chr2:9474303-9474322 MsG0280007016.01.T01:CDS 45.0%
AGTGACAGTAGCTGTAACAG+TGG + Chr2:9469979-9469998 None:intergenic 45.0%
ATCGACACATGTTCGACAGT+GGG - Chr2:9470878-9470897 MsG0280007016.01.T01:intron 45.0%
ATTCTTGGACGGAGCAAATG+AGG + Chr2:9473187-9473206 None:intergenic 45.0%
CCAATCTCACCATCAACTAG+AGG - Chr2:9470358-9470377 MsG0280007016.01.T01:intron 45.0%
CCACCTTGTGCATTTGTTTC+AGG - Chr2:9470127-9470146 MsG0280007016.01.T01:intron 45.0%
CCTGAAACAAATGCACAAGG+TGG + Chr2:9470130-9470149 None:intergenic 45.0%
CTTACAGGGACAGAATAGGA+GGG + Chr2:9472905-9472924 None:intergenic 45.0%
GACACGACCAAATGAGCTAA+CGG - Chr2:9473053-9473072 MsG0280007016.01.T01:intron 45.0%
GACGGTTATTGTGGGTCAAA+GGG + Chr2:9474471-9474490 None:intergenic 45.0%
GAGAGGGAAAGAGGTTCATT+TGG + Chr2:9469911-9469930 None:intergenic 45.0%
GAGGAATGAGTAGTTAGCGT+TGG + Chr2:9469933-9469952 None:intergenic 45.0%
GCAACAAGCCAACAAATGCT+TGG + Chr2:9474418-9474437 None:intergenic 45.0%
GGCAAAAGTAAAGTGACCGT+TGG + Chr2:9475217-9475236 None:intergenic 45.0%
GTTAACTCCTGATGAAGCTC+CGG + Chr2:9475669-9475688 None:intergenic 45.0%
GTTAGACAGGTTAGAAGGAC+AGG + Chr2:9473674-9473693 None:intergenic 45.0%
TAAACCCCCGTTAGCTCATT+TGG + Chr2:9473063-9473082 None:intergenic 45.0%
TAACACAACACCGACACATG+TGG - Chr2:9471479-9471498 MsG0280007016.01.T01:intron 45.0%
TAGTATTAAGGCAGATGGCC+TGG + Chr2:9472963-9472982 None:intergenic 45.0%
TCAAACGCGACGGTTATTGT+GGG + Chr2:9474479-9474498 None:intergenic 45.0%
TCTTACAGGGACAGAATAGG+AGG + Chr2:9472906-9472925 None:intergenic 45.0%
TGGCCATGAGAGTCAATCAA+TGG + Chr2:9475369-9475388 None:intergenic 45.0%
TTTGATCTTGTGTTCGCGCA+CGG - Chr2:9475319-9475338 MsG0280007016.01.T01:intron 45.0%
! AGCTTCTAGAAGAGTAGACC+AGG + Chr2:9473356-9473375 None:intergenic 45.0%
! ATGAGTAGTTAGCGTTGGAG+AGG + Chr2:9469928-9469947 None:intergenic 45.0%
! CCCAATTATTTTCCCTTCCC+TGG + Chr2:9472052-9472071 None:intergenic 45.0%
! CTTTGATAGCCCCTCCATTT+GGG + Chr2:9474316-9474335 None:intergenic 45.0%
! GACAGAGTTGCTTTGCCATT+GGG - Chr2:9473971-9473990 MsG0280007016.01.T01:intron 45.0%
! GGACCATTGATTGACTCTCA+TGG - Chr2:9475363-9475382 MsG0280007016.01.T01:intron 45.0%
! GGGAATAACTTTTCCAGGGA+AGG - Chr2:9472036-9472055 MsG0280007016.01.T01:intron 45.0%
! TGAGTAGTTAGCGTTGGAGA+GGG + Chr2:9469927-9469946 None:intergenic 45.0%
! TGGTCTACTCTTCTAGAAGC+TGG - Chr2:9473355-9473374 MsG0280007016.01.T01:intron 45.0%
! TGTCGAACATGTGTCGATGT+CGG + Chr2:9470876-9470895 None:intergenic 45.0%
! TTTGATAGCCCCTCCATTTG+GGG + Chr2:9474315-9474334 None:intergenic 45.0%
!! CACTGGTTCAGGCTTCATTT+GGG - Chr2:9471275-9471294 MsG0280007016.01.T01:intron 45.0%
!! CCTCTAGTTGATGGTGAGAT+TGG + Chr2:9470361-9470380 None:intergenic 45.0%
!! GTCGGTGTTGTGTTAATGTC+TGG + Chr2:9471474-9471493 None:intergenic 45.0%
!! TGGAGCACTGACACATATAC+AGG + Chr2:9471578-9471597 None:intergenic 45.0%
!! TTTGTTGGCTTGTTGCCCTA+TGG - Chr2:9474422-9474441 MsG0280007016.01.T01:intron 45.0%
!!! GTATTTTTTTTTTTAAATAA+TGG + Chr2:9471405-9471424 None:intergenic 5.0%
ACAGGTTAGAAGGACAGGGA+TGG + Chr2:9473669-9473688 None:intergenic 50.0%
ACGACCAAATGAGCTAACGG+GGG - Chr2:9473056-9473075 MsG0280007016.01.T01:intron 50.0%
AGGTGTAGCGTCAAGTGACA+TGG + Chr2:9473167-9473186 None:intergenic 50.0%
AGTGACATGGAAGCCACATG+TGG + Chr2:9473154-9473173 None:intergenic 50.0%
ATGCAGGTGGTCAGTGGTTT+AGG - Chr2:9474275-9474294 MsG0280007016.01.T01:CDS 50.0%
CAACTACAATTGTGGCCGAC+TGG + Chr2:9470747-9470766 None:intergenic 50.0%
CACGACCAAATGAGCTAACG+GGG - Chr2:9473055-9473074 MsG0280007016.01.T01:intron 50.0%
CATATAAAAGGGCCCAGGTG+TGG + Chr2:9473112-9473131 None:intergenic 50.0%
CATCGACACATGTTCGACAG+TGG - Chr2:9470877-9470896 MsG0280007016.01.T01:intron 50.0%
CCAAATGGAGGGGCTATCAA+AGG - Chr2:9474314-9474333 MsG0280007016.01.T01:CDS 50.0%
CGACGGTTATTGTGGGTCAA+AGG + Chr2:9474472-9474491 None:intergenic 50.0%
CTCGTCATATAAAAGGGCCC+AGG + Chr2:9473117-9473136 None:intergenic 50.0%
GACAGTAGCTGTAACAGTGG+CGG + Chr2:9469976-9469995 None:intergenic 50.0%
GACTCTCATGGCCATGTTGT+TGG - Chr2:9475375-9475394 MsG0280007016.01.T01:intron 50.0%
GAGATACCTTCCCCAAATGG+AGG - Chr2:9474302-9474321 MsG0280007016.01.T01:CDS 50.0%
GATACCTTCCCCAAATGGAG+GGG - Chr2:9474304-9474323 MsG0280007016.01.T01:CDS 50.0%
GCTCATTTGGTCGTGTCATG+TGG + Chr2:9473050-9473069 None:intergenic 50.0%
GGACGAGTCTCCTTGAAAAG+AGG + Chr2:9473091-9473110 None:intergenic 50.0%
GGGGCAAATGCAAGCAAATG+CGG - Chr2:9470721-9470740 MsG0280007016.01.T01:intron 50.0%
GTAAACACAGCCACCTTCAC+AGG - Chr2:9475399-9475418 MsG0280007016.01.T01:intron 50.0%
GTCAAACGCGACGGTTATTG+TGG + Chr2:9474480-9474499 None:intergenic 50.0%
GTCGCTTGCAACTGCAATTG+TGG + Chr2:9470974-9470993 None:intergenic 50.0%
! CAGGCCTTGTAGTTGCTTCA+TGG - Chr2:9470024-9470043 MsG0280007016.01.T01:intron 50.0%
! CCTTTGATAGCCCCTCCATT+TGG + Chr2:9474317-9474336 None:intergenic 50.0%
! CTAGAAAAGAGCGCACTCCT+TGG - Chr2:9470464-9470483 MsG0280007016.01.T01:intron 50.0%
! GATGCAAAAGTGGAAGGCAC+TGG - Chr2:9471258-9471277 MsG0280007016.01.T01:CDS 50.0%
! GGACAGAGTTGCTTTGCCAT+TGG - Chr2:9473970-9473989 MsG0280007016.01.T01:intron 50.0%
! TGCGCTCTTTTCTAGGTCTC+AGG + Chr2:9470459-9470478 None:intergenic 50.0%
! TTAGCGTTGGAGAGGGAAAG+AGG + Chr2:9469920-9469939 None:intergenic 50.0%
!! AAAGTGGAAGGCACTGGTTC+AGG - Chr2:9471264-9471283 MsG0280007016.01.T01:intron 50.0%
!! CAAGGAGTGCGCTCTTTTCT+AGG + Chr2:9470466-9470485 None:intergenic 50.0%
!! CATTTGGGGAAGGTATCTCG+CGG + Chr2:9474301-9474320 None:intergenic 50.0%
!! CGATGCACGCAAGCTTTGTT+TGG - Chr2:9474627-9474646 MsG0280007016.01.T01:intron 50.0%
!! GCACTGGTTCAGGCTTCATT+TGG - Chr2:9471274-9471293 MsG0280007016.01.T01:intron 50.0%
AAGGAGACTCGTCCACACCT+GGG - Chr2:9473097-9473116 MsG0280007016.01.T01:intron 55.0%
AGTAGCTGTAACAGTGGCGG+TGG + Chr2:9469973-9469992 None:intergenic 55.0%
ATAGCCCCTCCATTTGGGGA+AGG + Chr2:9474311-9474330 None:intergenic 55.0%
CACAGCCACCTTCACAGGAA+AGG - Chr2:9475404-9475423 MsG0280007016.01.T01:intron 55.0%
CGCGAGATACCTTCCCCAAA+TGG - Chr2:9474299-9474318 MsG0280007016.01.T01:CDS 55.0%
GACATGGAAGCCACATGTGG+CGG + Chr2:9473151-9473170 None:intergenic 55.0%
GGTGGGAAGGGTCTTTGTTG+AGG + Chr2:9469952-9469971 None:intergenic 55.0%
GTGGTGACAGCTCACAACCA+GGG + Chr2:9473031-9473050 None:intergenic 55.0%
GTTCGCGCACGGATGTTAAC+AGG - Chr2:9475330-9475349 MsG0280007016.01.T01:intron 55.0%
TGCAAGCAAATGCGGCCAGT+CGG - Chr2:9470729-9470748 MsG0280007016.01.T01:intron 55.0%
TGTGGTGACAGCTCACAACC+AGG + Chr2:9473032-9473051 None:intergenic 55.0%
!! CTAAACCCTAGGGATTGGCC+TGG + Chr2:9470506-9470525 None:intergenic 55.0%
!! TCAGGTACCGGAGCTTCATC+AGG - Chr2:9475659-9475678 MsG0280007016.01.T01:intron 55.0%
AGCTGTAACAGTGGCGGTGG+TGG + Chr2:9469970-9469989 None:intergenic 60.0%
CAAGGAGACTCGTCCACACC+TGG - Chr2:9473096-9473115 MsG0280007016.01.T01:intron 60.0%
CACCACCAGGCCAATCCCTA+GGG - Chr2:9470498-9470517 MsG0280007016.01.T01:intron 60.0%
GCTGTAACAGTGGCGGTGGT+GGG + Chr2:9469969-9469988 None:intergenic 60.0%
GTGGTGAAGGCTTGGGACCA+AGG + Chr2:9470484-9470503 None:intergenic 60.0%
TCACCACCAGGCCAATCCCT+AGG - Chr2:9470497-9470516 MsG0280007016.01.T01:intron 60.0%
! TGGCCTGGTGGTGAAGGCTT+GGG + Chr2:9470491-9470510 None:intergenic 60.0%
! TTGGCCTGGTGGTGAAGGCT+TGG + Chr2:9470492-9470511 None:intergenic 60.0%
!! AACAGTGGCGGTGGTGGGAA+GGG + Chr2:9469964-9469983 None:intergenic 60.0%
!! AACCCTAGGGATTGGCCTGG+TGG + Chr2:9470503-9470522 None:intergenic 60.0%
!! AGGGATTGGCCTGGTGGTGA+AGG + Chr2:9470497-9470516 None:intergenic 60.0%
!! TAACAGTGGCGGTGGTGGGA+AGG + Chr2:9469965-9469984 None:intergenic 60.0%
AGAAGAGGGGCCGCCACATG+TGG - Chr2:9473138-9473157 MsG0280007016.01.T01:intron 65.0%
GGTCCCAAGCCTTCACCACC+AGG - Chr2:9470485-9470504 MsG0280007016.01.T01:intron 65.0%
Chromosome Type Strat End Strand Name
Chr2 gene 9469698 9475871 9469698 ID=MsG0280007017.01;
Chr2 mRNA 9469698 9475871 9469698 ID=MsG0280007017.01.T01;Parent=MsG0280007017.01
Chr2 exon 9469698 9469906 9469698 ID=MsG0280007017.01.T01.exon;Parent=MsG0280007017.01.T01
Chr2 CDS 9469856 9469906 9469856 ID=MsG0280007017.01.T01.cds;Parent=MsG0280007017.01.T01
Chr2 CDS 9470144 9470217 9470144 ID=MsG0280007017.01.T01.cds;Parent=MsG0280007017.01.T01
Chr2 exon 9470144 9470217 9470144 ID=MsG0280007017.01.T01.exon;Parent=MsG0280007017.01.T01
Chr2 CDS 9471201 9471280 9471201 ID=MsG0280007017.01.T01.cds;Parent=MsG0280007017.01.T01
Chr2 exon 9471201 9471280 9471201 ID=MsG0280007017.01.T01.exon;Parent=MsG0280007017.01.T01
Chr2 CDS 9471541 9471662 9471541 ID=MsG0280007017.01.T01.cds;Parent=MsG0280007017.01.T01
Chr2 exon 9471541 9471662 9471541 ID=MsG0280007017.01.T01.exon;Parent=MsG0280007017.01.T01
Chr2 CDS 9473466 9473516 9473466 ID=MsG0280007017.01.T01.cds;Parent=MsG0280007017.01.T01
Chr2 exon 9473466 9473516 9473466 ID=MsG0280007017.01.T01.exon;Parent=MsG0280007017.01.T01
Chr2 CDS 9473644 9473706 9473644 ID=MsG0280007017.01.T01.cds;Parent=MsG0280007017.01.T01
Chr2 exon 9473644 9473706 9473644 ID=MsG0280007017.01.T01.exon;Parent=MsG0280007017.01.T01
Chr2 CDS 9474255 9474404 9474255 ID=MsG0280007017.01.T01.cds;Parent=MsG0280007017.01.T01
Chr2 exon 9474255 9474404 9474255 ID=MsG0280007017.01.T01.exon;Parent=MsG0280007017.01.T01
Chr2 CDS 9475421 9475699 9475421 ID=MsG0280007017.01.T01.cds;Parent=MsG0280007017.01.T01
Chr2 exon 9475421 9475871 9475421 ID=MsG0280007017.01.T01.exon;Parent=MsG0280007017.01.T01
Gene Sequence

>MsG0280007017.01.T01

ATGGTTGCAACAAAACCAATCATCACAATGTTTTCTCTCCAAATGAACCTCTTTCCCTCTCCAACGCTAACTACTCATTCCTCAACAAAGACCCTTCCCACCACCGCCACTGTTACAGCTACTGTCACTAAGCGAAGAGCCATTGTCTTCAGTTCAGGCCTTGTAGTTGCTTCATGGCTTAATTTCCTTCATTTCAATTCAACACAACCACTTTCACTTTCACAACAGCTACAAGATGAACTTCAACAACAAGAAGACCACCTTGTGCATTTGTTTCAGGAAACTTCGCCATCTGTTGTTTCCATTAAAGACATTGAATTGACTAAAGTCCCCAAAACCTCTTCTAATGAAGTCATGCTAGATGAGGATGAAGATGCAAAAGTGGAAGGCACTGGTTCAGGCTTCATTTGGGATAAATTTGGCCACATAGTTACCAATTACCATGTTGTAGCTAAACTAGCTACCGATACTAGTGGTTTACAACGTTGTAAGGGAAGGGAAAATAATTGGGTTGATCCATCATATGATCTAGCTGTTCTGAAGGTTGATGTTGATGGATACGAAATAAAGCCTGTTGTTATTGGTGAATCTAAGAATTTACATGTTGGACAGAGTTGCTTTGCCATTGGGAATCCTTATGGATATGAGAATACTCTCACAACAGGTGGTTTAGGCCGCGAGATACCTTCCCCAAATGGAGGGGCTATCAAAGGAGCTATTCAAACTGATGCAGCTATTAATGCAGGAAATTCAGGCGGACCATTGATTGACTCTCATGGCCATGTTGTTGGAGTAAACACAGCCACCTTCACAGGAAAGGTACCGGAGCTTCATCAGGAGTTAACTTTGCAATTCCCATCGACTCTGTAA

Protein sequence

>MsG0280007017.01.T01

MVATKPIITMFSLQMNLFPSPTLTTHSSTKTLPTTATVTATVTKRRAIVFSSGLVVASWLNFLHFNSTQPLSLSQQLQDELQQQEDHLVHLFQETSPSVVSIKDIELTKVPKTSSNEVMLDEDEDAKVEGTGSGFIWDKFGHIVTNYHVVAKLATDTSGLQRCKGRENNWVDPSYDLAVLKVDVDGYEIKPVVIGESKNLHVGQSCFAIGNPYGYENTLTTGGLGREIPSPNGGAIKGAIQTDAAINAGNSGGPLIDSHGHVVGVNTATFTGKVPELHQELTLQFPSTL*