Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0080610 | XP_013469070.2 | 95.378 | 649 | 23 | 1 | 1 | 649 | 1 | 642 | 0.0 | 1244 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0080610 | sp|Q5EA50|RABEK_BOVIN | 31.879 | 298 | 180 | 7 | 11 | 296 | 14 | 300 | 8.73e-41 | 155 |
Msa0080610 | sp|Q5EA50|RABEK_BOVIN | 31.395 | 258 | 152 | 10 | 62 | 306 | 15 | 260 | 1.92e-24 | 108 |
Msa0080610 | sp|Q5EA50|RABEK_BOVIN | 32.787 | 122 | 82 | 0 | 15 | 136 | 180 | 301 | 8.09e-14 | 77.0 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0080610 | A0A396JTJ5 | 95.378 | 649 | 23 | 1 | 1 | 649 | 1 | 642 | 0.0 | 1244 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0014770 | Msa0080610 | 0.819667 | 1.029895e-52 | -8.615850e-47 |
Msa0017670 | Msa0080610 | 0.800445 | 1.436767e-48 | -8.615850e-47 |
Msa0032180 | Msa0080610 | 0.808497 | 3.009253e-50 | -8.615850e-47 |
Msa0032460 | Msa0080610 | 0.890915 | 6.392815e-74 | -8.615850e-47 |
Msa0037740 | Msa0080610 | 0.805468 | 1.315964e-49 | -8.615850e-47 |
Msa0054690 | Msa0080610 | 0.816992 | 4.154391e-52 | -8.615850e-47 |
Msa0056180 | Msa0080610 | 0.821693 | 3.524654e-53 | -8.615850e-47 |
Msa0080610 | Msa0121330 | 0.801542 | 8.573159e-49 | -8.615850e-47 |
Msa0080610 | Msa0128460 | 0.800662 | 1.297527e-48 | -8.615850e-47 |
Msa0080610 | Msa0158860 | 0.804572 | 2.025371e-49 | -8.615850e-47 |
Msa0080610 | Msa0173290 | 0.853463 | 2.350179e-61 | -8.615850e-47 |
Msa0080610 | Msa0174290 | 0.801021 | 1.095636e-48 | -8.615850e-47 |
Msa0080610 | Msa0185960 | 0.876482 | 1.348316e-68 | -8.615850e-47 |
Msa0080610 | Msa0213610 | 0.802311 | 5.957298e-49 | -8.615850e-47 |
Msa0080610 | Msa0230800 | 0.802655 | 5.061264e-49 | -8.615850e-47 |
Msa0080610 | Msa0293040 | 0.807621 | 4.623293e-50 | -8.615850e-47 |
Msa0080610 | Msa0367520 | 0.808328 | 3.269214e-50 | -8.615850e-47 |
Msa0080610 | Msa0380670 | 0.802029 | 6.811120e-49 | -8.615850e-47 |
Msa0080610 | Msa0419540 | 0.804994 | 1.653852e-49 | -8.615850e-47 |
Msa0080610 | Msa0484570 | 0.807359 | 5.254654e-50 | -8.615850e-47 |
Msa0080610 | Msa0567170 | 0.831687 | 1.449423e-55 | -8.615850e-47 |
Msa0080610 | Msa0580370 | 0.814698 | 1.349123e-51 | -8.615850e-47 |
Msa0080610 | Msa0606100 | 0.803267 | 3.781933e-49 | -8.615850e-47 |
Msa0080610 | Msa0615630 | 0.806720 | 7.172821e-50 | -8.615850e-47 |
Msa0080610 | Msa0621710 | 0.802419 | 5.659747e-49 | -8.615850e-47 |
Msa0080610 | Msa0658640 | 0.831734 | 1.411230e-55 | -8.615850e-47 |
Msa0080610 | Msa0661150 | 0.808936 | 2.423467e-50 | -8.615850e-47 |
Msa0080610 | Msa0698730 | 0.819105 | 1.383266e-52 | -8.615850e-47 |
Msa0080610 | Msa0700460 | 0.816301 | 5.933317e-52 | -8.615850e-47 |
Msa0080610 | Msa0703600 | 0.832249 | 1.052852e-55 | -8.615850e-47 |
Msa0080610 | Msa0709200 | 0.832984 | 6.919302e-56 | -8.615850e-47 |
Msa0080610 | Msa0709440 | 0.803164 | 3.972866e-49 | -8.615850e-47 |
Msa0080610 | Msa0716480 | 0.801010 | 1.101793e-48 | -8.615850e-47 |
Msa0080610 | Msa0773630 | 0.801525 | 8.643785e-49 | -8.615850e-47 |
Msa0080610 | Msa0780910 | 0.811755 | 5.972602e-51 | -8.615850e-47 |
Msa0080610 | Msa0824450 | 0.805672 | 1.192289e-49 | -8.615850e-47 |
Msa0080610 | Msa0833650 | 0.807265 | 5.498693e-50 | -8.615850e-47 |
Msa0080610 | Msa0837460 | 0.809856 | 1.538400e-50 | -8.615850e-47 |
Msa0080610 | Msa0894790 | 0.828732 | 7.632059e-55 | -8.615850e-47 |
Msa0080610 | Msa1033920 | 0.802257 | 6.112221e-49 | -8.615850e-47 |
Msa0080610 | Msa1042160 | 0.823495 | 1.343470e-53 | -8.615850e-47 |
Msa0080610 | Msa1042190 | 0.821460 | 3.990606e-53 | -8.615850e-47 |
Msa0080610 | Msa1077990 | 0.833270 | 5.873149e-56 | -8.615850e-47 |
Msa0080610 | Msa1080000 | 0.822359 | 2.471517e-53 | -8.615850e-47 |
Msa0080610 | Msa1084530 | 0.806514 | 7.929139e-50 | -8.615850e-47 |
Msa0080610 | Msa1125820 | 0.809202 | 2.126247e-50 | -8.615850e-47 |
Msa0080610 | Msa1125990 | 0.810566 | 1.081809e-50 | -8.615850e-47 |
Msa0080610 | Msa1132530 | 0.827692 | 1.359795e-54 | -8.615850e-47 |
Msa0080610 | Msa1132840 | 0.811766 | 5.941083e-51 | -8.615850e-47 |
Msa0080610 | Msa1167470 | 0.830546 | 2.764014e-55 | -8.615850e-47 |
Msa0080610 | Msa1216090 | 0.804233 | 2.383606e-49 | -8.615850e-47 |
Msa0080610 | Msa1216110 | 0.808890 | 2.479204e-50 | -8.615850e-47 |
Msa0080610 | Msa1217910 | 0.802454 | 5.568982e-49 | -8.615850e-47 |
Msa0080610 | Msa1226520 | 0.834198 | 3.443338e-56 | -8.615850e-47 |
Msa0080610 | Msa1240770 | 0.828474 | 8.811615e-55 | -8.615850e-47 |
Msa0080610 | Msa1339170 | 0.800756 | 1.241301e-48 | -8.615850e-47 |
Msa0080610 | Msa1349690 | 0.810812 | 9.567744e-51 | -8.615850e-47 |
Msa0080610 | Msa1358290 | 0.806160 | 9.411914e-50 | -8.615850e-47 |
Msa0080610 | Msa1359690 | 0.811480 | 6.855242e-51 | -8.615850e-47 |
Msa0080610 | Msa1392740 | 0.802665 | 5.037214e-49 | -8.615850e-47 |
Msa0080610 | Msa1409410 | 0.813636 | 2.315235e-51 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0080610 | MtrunA17_Chr1g0192821 | 95.378 | 649 | 23 | 1 | 1 | 649 | 1 | 642 | 0.0 | 1244 |
Msa0080610 | MtrunA17_Chr4g0061581 | 35.669 | 314 | 178 | 10 | 22 | 321 | 19 | 322 | 2.87e-49 | 181 |
Msa0080610 | MtrunA17_Chr4g0061581 | 31.801 | 261 | 157 | 8 | 72 | 322 | 19 | 268 | 4.31e-35 | 140 |
Msa0080610 | MtrunA17_Chr4g0061581 | 32.000 | 225 | 143 | 5 | 15 | 232 | 65 | 286 | 7.45e-31 | 128 |
Msa0080610 | MtrunA17_Chr7g0272641 | 33.333 | 303 | 179 | 10 | 15 | 310 | 174 | 460 | 2.10e-35 | 142 |
Msa0080610 | MtrunA17_Chr7g0272641 | 30.622 | 209 | 133 | 6 | 11 | 212 | 276 | 479 | 9.18e-23 | 103 |
Msa0080610 | MtrunA17_Chr1g0197401 | 29.787 | 329 | 201 | 11 | 15 | 325 | 15 | 331 | 5.02e-33 | 133 |
Msa0080610 | MtrunA17_Chr1g0198221 | 29.412 | 306 | 185 | 8 | 22 | 306 | 14 | 309 | 4.68e-29 | 121 |
Msa0080610 | MtrunA17_Chr1g0198221 | 31.707 | 246 | 156 | 6 | 71 | 308 | 13 | 254 | 6.80e-28 | 117 |
Msa0080610 | MtrunA17_Chr1g0198221 | 30.403 | 273 | 162 | 7 | 14 | 267 | 57 | 320 | 1.08e-26 | 114 |
Msa0080610 | MtrunA17_Chr1g0198221 | 30.986 | 213 | 132 | 4 | 122 | 328 | 14 | 217 | 4.09e-24 | 106 |
Msa0080610 | MtrunA17_Chr2g0286241 | 30.909 | 275 | 166 | 9 | 15 | 277 | 76 | 338 | 9.27e-27 | 115 |
Msa0080610 | MtrunA17_Chr2g0286241 | 32.068 | 237 | 155 | 5 | 14 | 247 | 133 | 366 | 2.11e-26 | 114 |
Msa0080610 | MtrunA17_Chr2g0286241 | 27.273 | 264 | 176 | 6 | 57 | 312 | 68 | 323 | 2.30e-25 | 111 |
Msa0080610 | MtrunA17_Chr2g0286241 | 33.125 | 160 | 91 | 4 | 174 | 324 | 81 | 233 | 4.81e-17 | 85.1 |
Msa0080610 | MtrunA17_Chr2g0286241 | 26.906 | 223 | 138 | 8 | 112 | 322 | 73 | 282 | 8.24e-17 | 84.3 |
Msa0080610 | MtrunA17_Chr2g0286241 | 32.692 | 156 | 94 | 4 | 11 | 158 | 232 | 384 | 5.89e-14 | 75.5 |
Msa0080610 | MtrunA17_Chr4g0066851 | 27.237 | 257 | 169 | 5 | 65 | 312 | 84 | 331 | 6.81e-26 | 113 |
Msa0080610 | MtrunA17_Chr4g0066851 | 30.337 | 267 | 176 | 6 | 8 | 271 | 135 | 394 | 2.43e-25 | 111 |
Msa0080610 | MtrunA17_Chr4g0066851 | 29.137 | 278 | 167 | 10 | 15 | 277 | 84 | 346 | 3.10e-23 | 104 |
Msa0080610 | MtrunA17_Chr4g0066851 | 33.125 | 160 | 91 | 4 | 174 | 324 | 89 | 241 | 1.24e-16 | 84.0 |
Msa0080610 | MtrunA17_Chr4g0074871 | 29.758 | 289 | 179 | 11 | 29 | 306 | 279 | 554 | 8.16e-25 | 110 |
Msa0080610 | MtrunA17_Chr4g0074871 | 30.942 | 223 | 140 | 6 | 89 | 307 | 293 | 505 | 9.95e-20 | 94.4 |
Msa0080610 | MtrunA17_Chr4g0074871 | 31.658 | 199 | 131 | 4 | 25 | 222 | 333 | 527 | 1.95e-18 | 90.1 |
Msa0080610 | MtrunA17_Chr4g0074871 | 28.492 | 179 | 118 | 5 | 23 | 199 | 384 | 554 | 2.25e-14 | 77.0 |
Msa0080610 | MtrunA17_Chr2g0311721 | 24.540 | 326 | 219 | 9 | 15 | 323 | 8 | 323 | 6.31e-18 | 85.5 |
Msa0080610 | MtrunA17_Chr2g0297971 | 31.419 | 296 | 162 | 19 | 60 | 328 | 278 | 559 | 1.70e-17 | 86.3 |
Msa0080610 | MtrunA17_Chr2g0297971 | 26.239 | 343 | 216 | 16 | 8 | 323 | 276 | 608 | 1.31e-13 | 73.9 |
Msa0080610 | MtrunA17_Chr8g0391901 | 28.313 | 332 | 200 | 15 | 22 | 326 | 311 | 631 | 5.50e-17 | 84.7 |
Msa0080610 | MtrunA17_Chr8g0391901 | 28.826 | 281 | 164 | 16 | 24 | 280 | 364 | 632 | 1.04e-15 | 80.9 |
Msa0080610 | MtrunA17_Chr8g0391901 | 27.891 | 294 | 175 | 16 | 60 | 328 | 298 | 579 | 6.71e-15 | 78.2 |
Msa0080610 | MtrunA17_Chr1g0207821 | 25.692 | 253 | 163 | 8 | 52 | 282 | 100 | 349 | 7.78e-15 | 78.2 |
Msa0080610 | MtrunA17_Chr4g0002171 | 27.778 | 270 | 153 | 12 | 25 | 259 | 172 | 434 | 2.37e-14 | 75.9 |
Msa0080610 | MtrunA17_Chr4g0002171 | 28.125 | 352 | 190 | 17 | 25 | 322 | 118 | 460 | 7.16e-14 | 74.3 |
Msa0080610 | MtrunA17_Chr1g0196221 | 28.800 | 250 | 157 | 7 | 15 | 254 | 86 | 324 | 3.24e-14 | 76.3 |
Msa0080610 | MtrunA17_Chr1g0196221 | 26.573 | 286 | 168 | 13 | 70 | 324 | 22 | 296 | 1.10e-13 | 74.3 |
Msa0080610 | MtrunA17_Chr2g0322121 | 28.319 | 226 | 119 | 9 | 125 | 314 | 81 | 299 | 6.02e-12 | 69.3 |
Msa0080610 | MtrunA17_Chr2g0322121 | 26.855 | 283 | 169 | 11 | 53 | 306 | 142 | 415 | 5.80e-11 | 65.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0080610 | AT1G74150.3 | 36.223 | 323 | 184 | 9 | 23 | 332 | 17 | 330 | 3.32e-53 | 192 |
Msa0080610 | AT1G74150.3 | 31.119 | 286 | 178 | 8 | 14 | 291 | 61 | 335 | 2.41e-31 | 129 |
Msa0080610 | AT1G74150.2 | 36.278 | 317 | 180 | 9 | 23 | 326 | 17 | 324 | 6.03e-53 | 191 |
Msa0080610 | AT1G74150.2 | 30.824 | 279 | 160 | 11 | 63 | 322 | 1 | 265 | 1.30e-34 | 139 |
Msa0080610 | AT1G74150.2 | 32.271 | 251 | 155 | 7 | 14 | 256 | 61 | 304 | 4.00e-31 | 129 |
Msa0080610 | AT1G74150.1 | 36.278 | 317 | 180 | 9 | 23 | 326 | 17 | 324 | 6.19e-53 | 191 |
Msa0080610 | AT1G74150.1 | 30.824 | 279 | 160 | 11 | 63 | 322 | 1 | 265 | 1.48e-34 | 139 |
Msa0080610 | AT1G74150.1 | 32.271 | 251 | 155 | 7 | 14 | 256 | 61 | 304 | 4.03e-31 | 129 |
Msa0080610 | AT1G18610.1 | 36.129 | 310 | 176 | 9 | 25 | 321 | 22 | 322 | 1.55e-52 | 190 |
Msa0080610 | AT1G18610.1 | 30.466 | 279 | 164 | 10 | 63 | 322 | 1 | 268 | 3.15e-31 | 129 |
Msa0080610 | AT1G18610.1 | 31.746 | 252 | 159 | 6 | 12 | 256 | 62 | 307 | 5.00e-31 | 128 |
Msa0080610 | AT1G18610.2 | 36.129 | 310 | 176 | 9 | 25 | 321 | 22 | 322 | 1.55e-52 | 190 |
Msa0080610 | AT1G18610.2 | 30.466 | 279 | 164 | 10 | 63 | 322 | 1 | 268 | 3.15e-31 | 129 |
Msa0080610 | AT1G18610.2 | 31.746 | 252 | 159 | 6 | 12 | 256 | 62 | 307 | 5.00e-31 | 128 |
Msa0080610 | AT1G74150.4 | 37.453 | 267 | 148 | 7 | 65 | 321 | 46 | 303 | 1.79e-45 | 170 |
Msa0080610 | AT1G74150.4 | 32.061 | 262 | 159 | 8 | 3 | 256 | 38 | 288 | 1.69e-31 | 129 |
Msa0080610 | AT1G74150.4 | 31.193 | 218 | 132 | 7 | 112 | 322 | 43 | 249 | 1.29e-29 | 124 |
Msa0080610 | AT3G05420.1 | 32.362 | 309 | 182 | 9 | 15 | 306 | 171 | 469 | 2.05e-36 | 145 |
Msa0080610 | AT3G05420.1 | 26.937 | 271 | 177 | 8 | 64 | 323 | 170 | 430 | 1.09e-23 | 106 |
Msa0080610 | AT3G05420.1 | 30.263 | 152 | 98 | 4 | 15 | 161 | 333 | 481 | 2.14e-13 | 73.9 |
Msa0080610 | AT3G05420.2 | 32.362 | 309 | 182 | 9 | 15 | 306 | 172 | 470 | 2.07e-36 | 145 |
Msa0080610 | AT3G05420.2 | 26.937 | 271 | 177 | 8 | 64 | 323 | 171 | 431 | 1.07e-23 | 106 |
Msa0080610 | AT3G05420.2 | 30.263 | 152 | 98 | 4 | 15 | 161 | 334 | 482 | 2.04e-13 | 73.9 |
Msa0080610 | AT5G27630.3 | 29.314 | 423 | 254 | 12 | 15 | 421 | 172 | 565 | 7.18e-35 | 140 |
Msa0080610 | AT5G27630.4 | 33.818 | 275 | 160 | 7 | 15 | 277 | 172 | 436 | 1.49e-34 | 140 |
Msa0080610 | AT5G27630.1 | 33.818 | 275 | 160 | 7 | 15 | 277 | 172 | 436 | 1.53e-34 | 139 |
Msa0080610 | AT5G27630.2 | 30.295 | 373 | 231 | 11 | 15 | 371 | 172 | 531 | 2.26e-34 | 138 |
Msa0080610 | AT5G04420.2 | 28.249 | 354 | 206 | 13 | 15 | 341 | 22 | 354 | 4.97e-28 | 119 |
Msa0080610 | AT5G04420.2 | 27.213 | 305 | 177 | 10 | 64 | 336 | 21 | 312 | 7.33e-22 | 100 |
Msa0080610 | AT5G04420.1 | 28.249 | 354 | 206 | 13 | 15 | 341 | 22 | 354 | 4.97e-28 | 119 |
Msa0080610 | AT5G04420.1 | 27.213 | 305 | 177 | 10 | 64 | 336 | 21 | 312 | 7.33e-22 | 100 |
Msa0080610 | AT5G04420.3 | 28.249 | 354 | 206 | 13 | 15 | 341 | 22 | 354 | 4.97e-28 | 119 |
Msa0080610 | AT5G04420.3 | 27.213 | 305 | 177 | 10 | 64 | 336 | 21 | 312 | 7.33e-22 | 100 |
Msa0080610 | AT2G36360.3 | 28.431 | 306 | 188 | 8 | 22 | 306 | 14 | 309 | 1.48e-27 | 117 |
Msa0080610 | AT2G36360.3 | 31.707 | 246 | 156 | 6 | 71 | 308 | 13 | 254 | 9.58e-27 | 115 |
Msa0080610 | AT2G36360.3 | 31.502 | 273 | 159 | 7 | 14 | 267 | 57 | 320 | 1.41e-26 | 114 |
Msa0080610 | AT2G36360.2 | 28.431 | 306 | 188 | 8 | 22 | 306 | 14 | 309 | 1.52e-27 | 117 |
Msa0080610 | AT2G36360.2 | 31.707 | 246 | 156 | 6 | 71 | 308 | 13 | 254 | 1.07e-26 | 114 |
Msa0080610 | AT2G36360.2 | 31.502 | 273 | 159 | 7 | 14 | 267 | 57 | 320 | 1.53e-26 | 114 |
Msa0080610 | AT2G36360.1 | 28.431 | 306 | 188 | 8 | 22 | 306 | 14 | 309 | 1.52e-27 | 117 |
Msa0080610 | AT2G36360.1 | 31.707 | 246 | 156 | 6 | 71 | 308 | 13 | 254 | 1.07e-26 | 114 |
Msa0080610 | AT2G36360.1 | 31.502 | 273 | 159 | 7 | 14 | 267 | 57 | 320 | 1.53e-26 | 114 |
Msa0080610 | AT2G36360.4 | 28.431 | 306 | 188 | 8 | 22 | 306 | 14 | 309 | 2.86e-27 | 116 |
Msa0080610 | AT2G36360.4 | 31.707 | 246 | 156 | 6 | 71 | 308 | 13 | 254 | 1.65e-26 | 114 |
Msa0080610 | AT2G36360.4 | 31.136 | 273 | 160 | 7 | 14 | 267 | 57 | 320 | 2.20e-26 | 114 |
Msa0080610 | AT5G18590.2 | 27.509 | 269 | 179 | 6 | 65 | 325 | 66 | 326 | 6.49e-26 | 113 |
Msa0080610 | AT5G18590.2 | 31.731 | 208 | 137 | 4 | 14 | 219 | 123 | 327 | 1.83e-23 | 105 |
Msa0080610 | AT5G18590.2 | 28.700 | 223 | 134 | 9 | 112 | 322 | 63 | 272 | 8.94e-18 | 88.2 |
Msa0080610 | AT5G18590.1 | 27.509 | 269 | 179 | 6 | 65 | 325 | 66 | 326 | 6.49e-26 | 113 |
Msa0080610 | AT5G18590.1 | 31.731 | 208 | 137 | 4 | 14 | 219 | 123 | 327 | 1.83e-23 | 105 |
Msa0080610 | AT5G18590.1 | 28.700 | 223 | 134 | 9 | 112 | 322 | 63 | 272 | 8.94e-18 | 88.2 |
Msa0080610 | AT2G36360.5 | 27.937 | 315 | 187 | 9 | 22 | 306 | 14 | 318 | 1.30e-25 | 111 |
Msa0080610 | AT2G36360.5 | 30.980 | 255 | 155 | 7 | 71 | 308 | 13 | 263 | 1.17e-24 | 108 |
Msa0080610 | AT2G36360.5 | 30.496 | 282 | 159 | 8 | 14 | 267 | 57 | 329 | 5.56e-24 | 106 |
Msa0080610 | AT4G04670.1 | 34.973 | 183 | 109 | 4 | 125 | 307 | 322 | 494 | 4.90e-25 | 111 |
Msa0080610 | AT4G04670.1 | 27.801 | 241 | 162 | 5 | 67 | 306 | 314 | 543 | 1.07e-23 | 107 |
Msa0080610 | AT4G04670.1 | 29.876 | 241 | 155 | 5 | 19 | 256 | 314 | 543 | 1.99e-22 | 103 |
Msa0080610 | AT4G04670.1 | 26.360 | 239 | 163 | 5 | 15 | 245 | 363 | 596 | 2.88e-11 | 67.4 |
Msa0080610 | AT5G48180.1 | 25.617 | 324 | 206 | 13 | 15 | 318 | 8 | 316 | 7.82e-20 | 91.7 |
Msa0080610 | AT5G48180.1 | 27.237 | 257 | 169 | 8 | 64 | 318 | 7 | 247 | 2.64e-15 | 78.2 |
Msa0080610 | AT1G68050.1 | 29.275 | 345 | 204 | 15 | 8 | 326 | 285 | 615 | 4.53e-18 | 88.6 |
Msa0080610 | AT1G74150.6 | 33.113 | 151 | 88 | 4 | 176 | 320 | 9 | 152 | 1.57e-16 | 82.8 |
Msa0080610 | AT1G74150.6 | 31.667 | 180 | 109 | 9 | 115 | 291 | 2 | 170 | 6.64e-14 | 74.7 |
Msa0080610 | AT1G74150.5 | 33.113 | 151 | 88 | 4 | 176 | 320 | 9 | 152 | 1.57e-16 | 82.8 |
Msa0080610 | AT1G74150.5 | 31.667 | 180 | 109 | 9 | 115 | 291 | 2 | 170 | 6.64e-14 | 74.7 |
Msa0080610 | AT3G07720.1 | 25.506 | 247 | 167 | 6 | 64 | 306 | 9 | 242 | 1.81e-16 | 81.6 |
Msa0080610 | AT3G07720.1 | 23.423 | 333 | 227 | 11 | 5 | 320 | 1 | 322 | 1.42e-14 | 75.9 |
Msa0080610 | AT3G07720.1 | 25.455 | 275 | 183 | 9 | 15 | 275 | 62 | 328 | 1.22e-13 | 73.2 |
Msa0080610 | AT1G51550.1 | 30.714 | 280 | 151 | 17 | 17 | 259 | 166 | 439 | 3.90e-16 | 82.0 |
Msa0080610 | AT1G51550.1 | 26.923 | 312 | 179 | 17 | 25 | 305 | 120 | 413 | 1.41e-13 | 73.9 |
Msa0080610 | AT5G57360.1 | 28.696 | 345 | 207 | 18 | 8 | 324 | 273 | 606 | 1.09e-15 | 81.3 |
Msa0080610 | AT2G18915.2 | 27.168 | 346 | 207 | 15 | 8 | 323 | 274 | 604 | 2.03e-15 | 80.1 |
Msa0080610 | AT2G18915.1 | 27.168 | 346 | 207 | 15 | 8 | 323 | 264 | 594 | 2.12e-15 | 80.1 |
Msa0080610 | AT2G33070.1 | 26.829 | 246 | 165 | 6 | 64 | 306 | 153 | 386 | 6.62e-14 | 75.1 |
Msa0080610 | AT2G33070.1 | 25.229 | 218 | 145 | 5 | 37 | 242 | 229 | 440 | 1.99e-13 | 73.6 |
Msa0080610 | AT2G33070.2 | 26.829 | 246 | 165 | 6 | 64 | 306 | 153 | 386 | 6.62e-14 | 75.1 |
Msa0080610 | AT2G33070.2 | 25.229 | 218 | 145 | 5 | 37 | 242 | 229 | 440 | 1.99e-13 | 73.6 |
Msa0080610 | AT5G50310.1 | 25.000 | 272 | 171 | 9 | 35 | 285 | 92 | 351 | 6.82e-14 | 75.5 |
Msa0080610 | AT5G50310.1 | 26.866 | 201 | 124 | 7 | 31 | 211 | 128 | 325 | 6.38e-11 | 65.9 |
Msa0080610 | AT5G57360.2 | 28.135 | 327 | 196 | 18 | 8 | 306 | 273 | 588 | 9.88e-14 | 75.1 |
Msa0080610 | AT2G33070.3 | 25.229 | 218 | 145 | 5 | 37 | 242 | 231 | 442 | 2.04e-13 | 73.6 |
Msa0080610 | AT2G33070.3 | 26.613 | 248 | 165 | 7 | 64 | 306 | 153 | 388 | 1.31e-12 | 70.9 |
Msa0080610 | AT2G27210.1 | 26.429 | 280 | 185 | 10 | 53 | 320 | 152 | 422 | 4.31e-13 | 73.2 |
Msa0080610 | AT1G03445.1 | 29.891 | 184 | 103 | 8 | 125 | 290 | 28 | 203 | 5.33e-13 | 72.8 |
Msa0080610 | AT1G03445.1 | 27.273 | 297 | 178 | 13 | 45 | 321 | 71 | 349 | 9.97e-12 | 68.9 |
Msa0080610 | AT1G03445.1 | 27.106 | 273 | 169 | 11 | 15 | 268 | 86 | 347 | 6.24e-11 | 66.2 |
Msa0080610 | AT1G03445.2 | 29.891 | 184 | 103 | 8 | 125 | 290 | 28 | 203 | 6.81e-13 | 72.4 |
Msa0080610 | AT1G03445.2 | 27.273 | 297 | 178 | 13 | 45 | 321 | 71 | 349 | 1.33e-11 | 68.2 |
Msa0080610 | AT1G03445.2 | 27.106 | 273 | 169 | 11 | 15 | 268 | 86 | 347 | 7.70e-11 | 65.9 |
Msa0080610 | AT3G16400.2 | 25.118 | 211 | 138 | 4 | 31 | 226 | 216 | 421 | 7.57e-13 | 71.6 |
Msa0080610 | AT3G16400.2 | 25.826 | 333 | 216 | 12 | 5 | 318 | 143 | 463 | 1.76e-12 | 70.5 |
Msa0080610 | AT3G16400.1 | 25.118 | 211 | 138 | 4 | 31 | 226 | 216 | 421 | 7.57e-13 | 71.6 |
Msa0080610 | AT3G16400.1 | 25.826 | 333 | 216 | 12 | 5 | 318 | 143 | 463 | 1.76e-12 | 70.5 |
Msa0080610 | AT1G08420.1 | 26.071 | 280 | 186 | 10 | 53 | 320 | 163 | 433 | 1.21e-12 | 72.0 |
Msa0080610 | AT3G16410.1 | 25.126 | 199 | 135 | 3 | 37 | 226 | 377 | 570 | 1.77e-12 | 70.9 |
Msa0080610 | AT3G16410.1 | 25.430 | 291 | 201 | 9 | 5 | 287 | 292 | 574 | 5.71e-11 | 66.2 |
Msa0080610 | AT4G03080.1 | 26.718 | 262 | 155 | 11 | 73 | 307 | 25 | 276 | 2.29e-12 | 70.9 |
Msa0080610 | AT3G16390.2 | 25.110 | 227 | 149 | 5 | 31 | 242 | 216 | 436 | 6.17e-12 | 68.9 |
Msa0080610 | AT3G16390.2 | 27.200 | 250 | 157 | 8 | 65 | 306 | 153 | 385 | 1.86e-11 | 67.4 |
Msa0080610 | AT3G16390.2 | 25.672 | 335 | 219 | 13 | 5 | 322 | 143 | 464 | 4.00e-11 | 66.2 |
Msa0080610 | AT3G16390.1 | 25.110 | 227 | 149 | 5 | 31 | 242 | 216 | 436 | 6.17e-12 | 68.9 |
Msa0080610 | AT3G16390.1 | 27.200 | 250 | 157 | 8 | 65 | 306 | 153 | 385 | 1.86e-11 | 67.4 |
Msa0080610 | AT3G16390.1 | 25.672 | 335 | 219 | 13 | 5 | 322 | 143 | 464 | 4.00e-11 | 66.2 |
Msa0080610 | AT2G27210.2 | 25.993 | 277 | 185 | 10 | 53 | 320 | 152 | 417 | 1.12e-11 | 68.6 |
Msa0080610 | AT1G08420.2 | 25.632 | 277 | 186 | 10 | 53 | 320 | 163 | 428 | 3.22e-11 | 67.4 |
Find 163 sgRNAs with CRISPR-Local
Find 247 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTGACATACACACTTGTTTA+TGG | 0.163401 | 1_2:-58891041 | Msa0080610:CDS |
GAGCATGTAGTGGTTGCTTT+AGG | 0.222096 | 1_2:+58889486 | None:intergenic |
TGTGATTGCGACCCTTAATT+TGG | 0.234426 | 1_2:-58889070 | Msa0080610:three_prime_UTR |
CTTGATGGAAACAAACAATT+TGG | 0.239299 | 1_2:+58889596 | None:intergenic |
GGTGGTATCCCTTCACATTT+AGG | 0.241948 | 1_2:+58892028 | None:intergenic |
ATGTGGAAGTCTTGGGAAAA+TGG | 0.242978 | 1_2:-58890462 | Msa0080610:CDS |
AACGTTATTGCAACGACATT+TGG | 0.261258 | 1_2:-58891068 | Msa0080610:CDS |
ATGTTTGGACCTTGACAAAA+TGG | 0.261385 | 1_2:-58892212 | Msa0080610:CDS |
TGATGTTAGTTTGCTTGATA+TGG | 0.262825 | 1_2:-58891759 | Msa0080610:CDS |
TTTAGGCTTAATCCATTCTT+TGG | 0.268713 | 1_2:+58892045 | None:intergenic |
ATTGATGGAGCCTTTGATTC+AGG | 0.269269 | 1_2:-58889785 | Msa0080610:CDS |
AGCCACATTGCTTTCTTCTT+AGG | 0.272073 | 1_2:+58892817 | None:intergenic |
AAATATTGAGGAGGTTAATA+AGG | 0.274112 | 1_2:-58889331 | Msa0080610:three_prime_UTR |
GGTCACTCTGCTTGCTTCTC+TGG | 0.304115 | 1_2:-58892754 | Msa0080610:CDS |
CGACCGTCTCCAATCATAAA+AGG | 0.307200 | 1_2:-58889464 | Msa0080610:CDS |
CGACCGTGTCAATTTGATTC+AGG | 0.313607 | 1_2:-58890412 | Msa0080610:intron |
AGTCATTGTACTCTTGCTAT+TGG | 0.314706 | 1_2:-58891830 | Msa0080610:CDS |
GCAAAGTCTTCAGAAGTTAT+TGG | 0.322115 | 1_2:-58890708 | Msa0080610:CDS |
GACACCGATATTGTTATATA+TGG | 0.328819 | 1_2:-58890955 | Msa0080610:CDS |
GGAAATAATGCTTGATCCTT+AGG | 0.346867 | 1_2:-58889356 | Msa0080610:exon |
CAAGCATTATTTCCACTTGC+AGG | 0.349704 | 1_2:+58889365 | None:intergenic |
CAGGAGTGACTTGCAAGGTT+TGG | 0.352406 | 1_2:-58889405 | Msa0080610:CDS |
TGTGGAAGTCTTGGGAAAAT+GGG | 0.354487 | 1_2:-58890461 | Msa0080610:CDS |
GTCATTGTACTCTTGCTATT+GGG | 0.354949 | 1_2:-58891829 | Msa0080610:CDS |
GAAGTTCTTGGCAAAATTGA+TGG | 0.359155 | 1_2:-58889800 | Msa0080610:CDS |
TAGATTGGTACCGAAGTTCT+TGG | 0.360287 | 1_2:-58889812 | Msa0080610:CDS |
AGCATGTAGTGGTTGCTTTA+GGG | 0.379817 | 1_2:+58889487 | None:intergenic |
ACCAGAAAATTTCGCGTATC+GGG | 0.384937 | 1_2:-58890489 | Msa0080610:intron |
AAACAAACACATATTATTCA+TGG | 0.386568 | 1_2:-58892860 | Msa0080610:exon |
ACGTTATTGCAACGACATTT+GGG | 0.386709 | 1_2:-58891067 | Msa0080610:CDS |
AAGGTTCTTCACCAGGAGTC+AGG | 0.389468 | 1_2:-58891527 | Msa0080610:CDS |
GAATCCATGGCAGAAGCATT+TGG | 0.396548 | 1_2:+58890181 | None:intergenic |
CGGGAATAATGTGGAAGTCT+TGG | 0.398146 | 1_2:-58890470 | Msa0080610:CDS |
AAATGGACATAACAACTTAT+CGG | 0.398694 | 1_2:-58890734 | Msa0080610:CDS |
TTATTTCAGGTATACATCAT+TGG | 0.403078 | 1_2:-58891105 | Msa0080610:intron |
AATGGACATAACAACTTATC+GGG | 0.405221 | 1_2:-58890733 | Msa0080610:CDS |
AACTCCATCTCATAGTTCTA+AGG | 0.405995 | 1_2:+58891894 | None:intergenic |
GATAAGTTGTTATGTCCATT+TGG | 0.409080 | 1_2:+58890736 | None:intergenic |
TGAAGATATTGTTCTTGCTT+TGG | 0.410809 | 1_2:+58890022 | None:intergenic |
GGGAATAATGTGGAAGTCTT+GGG | 0.423116 | 1_2:-58890469 | Msa0080610:CDS |
AAAATATTCAAAATGTCCTT+AGG | 0.427856 | 1_2:-58889112 | Msa0080610:three_prime_UTR |
TTGATCTTTACACCAAAGAA+TGG | 0.429246 | 1_2:-58892057 | Msa0080610:CDS |
CAAGGTTTGGCTTTAACACT+AGG | 0.430586 | 1_2:-58889392 | Msa0080610:CDS |
GGGAATAAGCTTATTGTGTA+TGG | 0.432274 | 1_2:-58891809 | Msa0080610:CDS |
AGGATTAAAACCTAAAACCT+TGG | 0.432402 | 1_2:+58892789 | None:intergenic |
TATCCGCGTCCGGCAGGCTT+CGG | 0.433353 | 1_2:+58889956 | None:intergenic |
GCATGACCTGCCCTGACTCC+TGG | 0.433921 | 1_2:+58891516 | None:intergenic |
AAAGAAGAAGAGATGAAGAA+AGG | 0.439452 | 1_2:+58893025 | None:intergenic |
TGTCAACTTGACAATTTCTC+AGG | 0.439778 | 1_2:-58890112 | Msa0080610:CDS |
CTAATGACTGCAGTAGTGAA+TGG | 0.440066 | 1_2:-58889758 | Msa0080610:CDS |
TTCATGAGAGGCTGACTTGA+TGG | 0.443717 | 1_2:+58889581 | None:intergenic |
GTCTTGGGAAAATGGGGTTA+TGG | 0.445343 | 1_2:-58890454 | Msa0080610:CDS |
CCCGCCATATATAACAATAT+CGG | 0.451213 | 1_2:+58890951 | None:intergenic |
CGATATCGCCGAGTCAAACT+AGG | 0.452268 | 1_2:-58890154 | Msa0080610:CDS |
TGAGTGTATCCGCGTCCGGC+AGG | 0.454398 | 1_2:+58889950 | None:intergenic |
TGGAGCAAGGTTACTACAAC+AGG | 0.454699 | 1_2:-58892187 | Msa0080610:CDS |
TTCAACATCCCACACCTTTG+TGG | 0.462742 | 1_2:+58890288 | None:intergenic |
GATCCTTAGGTGAAATATTG+AGG | 0.465858 | 1_2:-58889343 | Msa0080610:three_prime_UTR |
CATGTTAATGATGAAGAGCT+TGG | 0.468164 | 1_2:-58889144 | Msa0080610:three_prime_UTR |
ATATCTAAGTTACCGTTGTA+TGG | 0.468856 | 1_2:+58889197 | None:intergenic |
TATCAATAGACATGAAAAGA+TGG | 0.471713 | 1_2:+58893078 | None:intergenic |
CAATGACTATCTCTAGGAAC+AGG | 0.483951 | 1_2:+58891845 | None:intergenic |
ATGGAGATGAATGCTGAGAC+AGG | 0.490805 | 1_2:+58890239 | None:intergenic |
TAATCAAATGTTCCATCCTA+AGG | 0.495488 | 1_2:+58889096 | None:intergenic |
TACCCGGAGAACATAAAATC+AGG | 0.496896 | 1_2:-58889424 | Msa0080610:CDS |
GTCCTACAAGAACAGCACTA+TGG | 0.503973 | 1_2:+58892140 | None:intergenic |
CTTGCAGCAGAGCATCCAAA+TGG | 0.505763 | 1_2:-58890751 | Msa0080610:CDS |
CCTCCTCAATATTTCACCTA+AGG | 0.507116 | 1_2:+58889340 | None:intergenic |
TAATGACTGCAGTAGTGAAT+GGG | 0.507894 | 1_2:-58889757 | Msa0080610:CDS |
TGAATAATCTATCAGGGAGC+AGG | 0.510071 | 1_2:-58889629 | Msa0080610:intron |
AGCCATAGTGCTGTTCTTGT+AGG | 0.510145 | 1_2:-58892142 | Msa0080610:CDS |
TCAAGAAAAGAAGACCATCC+TGG | 0.511840 | 1_2:-58890683 | Msa0080610:CDS |
GGATTAAAACCTAAAACCTT+GGG | 0.516565 | 1_2:+58892790 | None:intergenic |
GACCAGAAAATTTCGCGTAT+CGG | 0.516872 | 1_2:-58890490 | Msa0080610:intron |
GTGTTGAGTGTATCCGCGTC+CGG | 0.517641 | 1_2:+58889946 | None:intergenic |
TTCAGGTATACATCATTGGA+GGG | 0.528619 | 1_2:-58891101 | Msa0080610:intron |
GGAAACAATGACTTGGACTA+GGG | 0.529748 | 1_2:-58891738 | Msa0080610:intron |
TATTCAAAATGTCCTTAGGA+TGG | 0.529866 | 1_2:-58889108 | Msa0080610:three_prime_UTR |
TCTTGTTGGTGGTGAAAGAC+TGG | 0.530082 | 1_2:-58891978 | Msa0080610:CDS |
AACACTAACAATTCATTCAA+AGG | 0.530492 | 1_2:+58890778 | None:intergenic |
CAAATCATGTGGATAATTCG+AGG | 0.531788 | 1_2:-58889556 | Msa0080610:CDS |
TTGTCAAGTTGACAAGTGCT+TGG | 0.532756 | 1_2:+58890121 | None:intergenic |
GAACCGAAGCCTGCCGGACG+CGG | 0.532959 | 1_2:-58889959 | Msa0080610:CDS |
TTTCAGGTATACATCATTGG+AGG | 0.533107 | 1_2:-58891102 | Msa0080610:intron |
TGGTCTCAACTTGATATACA+TGG | 0.535726 | 1_2:-58891021 | Msa0080610:CDS |
TTGTATCTACTCCGCCATCC+AGG | 0.538216 | 1_2:+58890665 | None:intergenic |
CCGATATTGTTATATATGGC+GGG | 0.538845 | 1_2:-58890951 | Msa0080610:intron |
AGTCACACTGCTACTCTTGT+TGG | 0.540157 | 1_2:-58891992 | Msa0080610:CDS |
GGTCATGCAGCTGTGAATGT+TGG | 0.541807 | 1_2:-58891501 | Msa0080610:CDS |
ATTGTGTATGGTGGAGATAG+TGG | 0.545972 | 1_2:-58891797 | Msa0080610:CDS |
CTCTGCTGTGATTGTGAATG+TGG | 0.547630 | 1_2:+58892909 | None:intergenic |
CAAGAACAATATCTTCATGT+TGG | 0.548229 | 1_2:-58890016 | Msa0080610:CDS |
TGGATTAAGCCTAAATGTGA+AGG | 0.551727 | 1_2:-58892037 | Msa0080610:CDS |
TGTTCTTGATCAGATTGAGA+TGG | 0.553752 | 1_2:+58890220 | None:intergenic |
CAAGCTCTTCATCATTAACA+TGG | 0.554718 | 1_2:+58889145 | None:intergenic |
ATCAATAGACATGAAAAGAT+GGG | 0.555859 | 1_2:+58893079 | None:intergenic |
TCTGATCAAGAACAGACTCC+AGG | 0.556028 | 1_2:-58890211 | Msa0080610:CDS |
GCGATATCGCTGAGAATCCA+TGG | 0.559368 | 1_2:+58890168 | None:intergenic |
GTAGCAGTGTGACTTTCCCT+TGG | 0.559880 | 1_2:+58892001 | None:intergenic |
GTATACATCATTGGAGGGGT+CGG | 0.560007 | 1_2:-58891096 | Msa0080610:CDS |
CATTAGAAAACCTGAATCAA+AGG | 0.560029 | 1_2:+58889775 | None:intergenic |
ACACAATACTACATAACTCA+TGG | 0.560215 | 1_2:+58889262 | None:intergenic |
AAAACCAAATGCTTCTGCCA+TGG | 0.560581 | 1_2:-58890185 | Msa0080610:CDS |
TGGAAACAATGACTTGGACT+AGG | 0.562915 | 1_2:-58891739 | Msa0080610:CDS |
ACCGATATTGTTATATATGG+CGG | 0.564182 | 1_2:-58890952 | Msa0080610:CDS |
GGCACATCACCTTTAACCTC+AGG | 0.564358 | 1_2:+58891866 | None:intergenic |
CTAAGTTACCGTTGTATGGT+CGG | 0.565702 | 1_2:+58889201 | None:intergenic |
GTGGAAGTCTTGGGAAAATG+GGG | 0.565975 | 1_2:-58890460 | Msa0080610:CDS |
TGACTTTCCCTTGGTGAAGG+TGG | 0.566581 | 1_2:+58892010 | None:intergenic |
AGCTGTGAATGTTGGAACTA+AGG | 0.566757 | 1_2:-58891493 | Msa0080610:CDS |
AGAGTACAATGACTATCTCT+AGG | 0.569296 | 1_2:+58891839 | None:intergenic |
GCTTTAGAACCGAAGCCTGC+CGG | 0.571151 | 1_2:-58889965 | Msa0080610:CDS |
GTGTGACTTTCCCTTGGTGA+AGG | 0.574494 | 1_2:+58892007 | None:intergenic |
ACACTAGGAGGGCCTGCAAG+TGG | 0.574524 | 1_2:-58889377 | Msa0080610:CDS |
AATAAGCTTATTGTGTATGG+TGG | 0.576597 | 1_2:-58891806 | Msa0080610:CDS |
AGGTTCTTCACCAGGAGTCA+GGG | 0.576841 | 1_2:-58891526 | Msa0080610:CDS |
GAGTGACCCCATCTTTGAGA+AGG | 0.578017 | 1_2:+58892769 | None:intergenic |
GGTTTGGCTTTAACACTAGG+AGG | 0.578223 | 1_2:-58889389 | Msa0080610:CDS |
CACACTGCTACTCTTGTTGG+TGG | 0.578346 | 1_2:-58891989 | Msa0080610:CDS |
TAGACCTTAGAACTATGAGA+TGG | 0.585997 | 1_2:-58891898 | Msa0080610:CDS |
TGGACCTTGACAAAATGGAA+TGG | 0.587543 | 1_2:-58892207 | Msa0080610:CDS |
TCTTCACCAGGAGTCAGGGC+AGG | 0.593035 | 1_2:-58891522 | Msa0080610:CDS |
GAATTGCTGCCACAAAGGTG+TGG | 0.593293 | 1_2:-58890297 | Msa0080610:CDS |
GAACTTCTCAACAGAAGAGG+AGG | 0.594338 | 1_2:-58890321 | Msa0080610:CDS |
CTATGGCTATCTCTAGGACC+TGG | 0.596063 | 1_2:+58892157 | None:intergenic |
TTTAATCCTTCTCAAAGATG+GGG | 0.598086 | 1_2:-58892775 | Msa0080610:CDS |
GAAAAGAAGACCATCCTGGA+TGG | 0.600096 | 1_2:-58890679 | Msa0080610:CDS |
GTTTGGCTTTAACACTAGGA+GGG | 0.600809 | 1_2:-58889388 | Msa0080610:CDS |
ACTAATACAGTGTCCTTACC+CGG | 0.601816 | 1_2:-58889440 | Msa0080610:CDS |
ACAGCACTATGGCTATCTCT+AGG | 0.602607 | 1_2:+58892151 | None:intergenic |
TTCGCGTATCGGGAATAATG+TGG | 0.607764 | 1_2:-58890479 | Msa0080610:CDS |
ATCTACTCCGCCATCCAGGA+TGG | 0.609038 | 1_2:+58890669 | None:intergenic |
TTGATATGGAAACAATGACT+TGG | 0.610664 | 1_2:-58891745 | Msa0080610:CDS |
GATAGTGGTGATCAGTATCA+TGG | 0.612803 | 1_2:-58891782 | Msa0080610:CDS |
CAGGAACTTCTCAACAGAAG+AGG | 0.612859 | 1_2:-58890324 | Msa0080610:CDS |
ACATGATTTGAGTTCATGAG+AGG | 0.614402 | 1_2:+58889569 | None:intergenic |
ACTACAACAGGTGAAAAGCC+AGG | 0.619726 | 1_2:-58892175 | Msa0080610:CDS |
TCTGACTTGTAGCAGGTGTG+GGG | 0.622977 | 1_2:-58890812 | Msa0080610:intron |
TCTCATGAACTCAAATCATG+TGG | 0.625132 | 1_2:-58889567 | Msa0080610:CDS |
AGCAATGTGGCTGTATCCCA+AGG | 0.627800 | 1_2:-58892806 | Msa0080610:CDS |
GGATTAAGCCTAAATGTGAA+GGG | 0.630444 | 1_2:-58892036 | Msa0080610:CDS |
TCAGGTATACATCATTGGAG+GGG | 0.630931 | 1_2:-58891100 | Msa0080610:intron |
GAGGAGAATTGCTGCCACAA+AGG | 0.632549 | 1_2:-58890302 | Msa0080610:CDS |
TGACAAAATGGAATGGAGCA+AGG | 0.633271 | 1_2:-58892200 | Msa0080610:CDS |
ACGCGGATACACTCAACACC+TGG | 0.635158 | 1_2:-58889942 | Msa0080610:intron |
AATTGCTGCCACAAAGGTGT+GGG | 0.636773 | 1_2:-58890296 | Msa0080610:CDS |
GGTTGCTTTAGGGCATAGCA+CGG | 0.638751 | 1_2:+58889497 | None:intergenic |
GGAGACGGTCGAGCATGTAG+TGG | 0.646174 | 1_2:+58889476 | None:intergenic |
AAGAAGACCATCCTGGATGG+CGG | 0.653485 | 1_2:-58890676 | Msa0080610:CDS |
AGGGATACCACCTTCACCAA+GGG | 0.655838 | 1_2:-58892017 | Msa0080610:CDS |
TGGAGATGAATGCTGAGACA+GGG | 0.656111 | 1_2:+58890240 | None:intergenic |
AAAATCAGGAGTGACTTGCA+AGG | 0.656845 | 1_2:-58889410 | Msa0080610:CDS |
CGTATCTGCCGACCATACAA+CGG | 0.661203 | 1_2:-58889209 | Msa0080610:three_prime_UTR |
CTACCTGAATCAAATTGACA+CGG | 0.661599 | 1_2:+58890409 | None:intergenic |
CCTTAGGTGAAATATTGAGG+AGG | 0.666374 | 1_2:-58889340 | Msa0080610:three_prime_UTR |
GTATGAGAAAACCGTCCTTG+TGG | 0.675141 | 1_2:+58890991 | None:intergenic |
AAGGGATACCACCTTCACCA+AGG | 0.676653 | 1_2:-58892018 | Msa0080610:CDS |
ATGGTCAACAGCCACAAGGA+CGG | 0.677236 | 1_2:-58891002 | Msa0080610:CDS |
ATCGGTGTCTGCAACAACAG+CGG | 0.678886 | 1_2:+58890969 | None:intergenic |
ATACATGGTCAACAGCCACA+AGG | 0.682432 | 1_2:-58891006 | Msa0080610:CDS |
ATGGACATAACAACTTATCG+GGG | 0.694887 | 1_2:-58890732 | Msa0080610:CDS |
CTCCTAAGAAGAAAGCAATG+TGG | 0.723011 | 1_2:-58892819 | Msa0080610:CDS |
TGGCGGAGTAGATACAAACA+CGG | 0.767759 | 1_2:-58890659 | Msa0080610:intron |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATATTGAAAATAATGATTTT+TGG | + | chr1_2:58890513-58890532 | None:intergenic | 10.0% |
!!! | TTATTTTTCTCTTTTTTTTT+CGG | - | chr1_2:58892927-58892946 | Msa0080610:five_prime_UTR | 10.0% |
!!! | AATCTTATAATTTGTTCATA+TGG | - | chr1_2:58890471-58890490 | Msa0080610:CDS | 15.0% |
!! | TTAATTACTTATGCTATATA+TGG | - | chr1_2:58891002-58891021 | Msa0080610:CDS | 15.0% |
!! | TTAAATTTGTAATATTATGC+AGG | - | chr1_2:58891823-58891842 | Msa0080610:CDS | 15.0% |
!! | AAACAAACACATATTATTCA+TGG | - | chr1_2:58889306-58889325 | Msa0080610:three_prime_UTR | 20.0% |
!!! | GAAGACTTATGTATATTTTT+GGG | - | chr1_2:58889434-58889453 | Msa0080610:CDS | 20.0% |
!!! | AAGACTTATGTATATTTTTG+GGG | - | chr1_2:58889435-58889454 | Msa0080610:CDS | 20.0% |
!! | TCATAAGTTTATTACTTCTT+TGG | - | chr1_2:58889537-58889556 | Msa0080610:CDS | 20.0% |
!! | TAAGATAGCAAAAATATGAT+TGG | + | chr1_2:58889796-58889815 | None:intergenic | 20.0% |
!!! | ATAATTTGTTCATATGGAAA+TGG | - | chr1_2:58890477-58890496 | Msa0080610:CDS | 20.0% |
!!! | TATGAATTTAGGAGTATTTT+AGG | + | chr1_2:58890771-58890790 | None:intergenic | 20.0% |
!!! | AATTTGAATTTTGAAAGCAA+AGG | + | chr1_2:58892255-58892274 | None:intergenic | 20.0% |
!! | TAACAAATGAATAATCTATC+AGG | - | chr1_2:58892530-58892549 | Msa0080610:intron | 20.0% |
!! | AACAAATGAATAATCTATCA+GGG | - | chr1_2:58892531-58892550 | Msa0080610:intron | 20.0% |
!! | AAAATATTCAAAATGTCCTT+AGG | - | chr1_2:58893054-58893073 | Msa0080610:five_prime_UTR | 20.0% |
! | ATCAATAGACATGAAAAGAT+GGG | + | chr1_2:58889090-58889109 | None:intergenic | 25.0% |
! | TATCAATAGACATGAAAAGA+TGG | + | chr1_2:58889091-58889110 | None:intergenic | 25.0% |
!! | TTTTAATCCTTCTCAAAGAT+GGG | - | chr1_2:58889390-58889409 | Msa0080610:CDS | 25.0% |
!! | GGAAGACTTATGTATATTTT+TGG | - | chr1_2:58889433-58889452 | Msa0080610:CDS | 25.0% |
! | TATATACACACTGTGTTTAA+TGG | - | chr1_2:58889499-58889518 | Msa0080610:CDS | 25.0% |
!!! | ATTTAATTTTAGGGATGTTG+TGG | - | chr1_2:58889907-58889926 | Msa0080610:intron | 25.0% |
!! | TTTTAGTGATGTACTATGTT+TGG | - | chr1_2:58889939-58889958 | Msa0080610:intron | 25.0% |
!!! | AATAATGATTTTTGGTCACT+AGG | + | chr1_2:58890505-58890524 | None:intergenic | 25.0% |
! | TTATGACAGTTGAAAAATCA+AGG | - | chr1_2:58890620-58890639 | Msa0080610:intron | 25.0% |
!! | TATTTGTAGGAATTTGTTCT+AGG | + | chr1_2:58890826-58890845 | None:intergenic | 25.0% |
!!! | TTCTCTAAAGTGTTATTTGT+AGG | + | chr1_2:58890839-58890858 | None:intergenic | 25.0% |
!! | TTATTTCAGGTATACATCAT+TGG | - | chr1_2:58891061-58891080 | Msa0080610:CDS | 25.0% |
! | ATAGGATAAAGCTAATTTGA+CGG | + | chr1_2:58891250-58891269 | None:intergenic | 25.0% |
! | AACACTAACAATTCATTCAA+AGG | + | chr1_2:58891391-58891410 | None:intergenic | 25.0% |
! | AAATGGACATAACAACTTAT+CGG | - | chr1_2:58891432-58891451 | Msa0080610:intron | 25.0% |
! | TCAAAAAGATCTTCATGTAA+TGG | - | chr1_2:58892113-58892132 | Msa0080610:CDS | 25.0% |
!!! | TTTGATTTTGAATCCTAGAT+TGG | - | chr1_2:58892339-58892358 | Msa0080610:intron | 25.0% |
!! | GTATTAGTTCCTTTTATGAT+TGG | + | chr1_2:58892714-58892733 | None:intergenic | 25.0% |
! | AAATATTGAGGAGGTTAATA+AGG | - | chr1_2:58892835-58892854 | Msa0080610:CDS | 25.0% |
!! | GTAATTGCTCTGTATTTTAT+TGG | - | chr1_2:58892863-58892882 | Msa0080610:exon | 25.0% |
!! | ATTTTATTGGATGTGTTTGT+AGG | - | chr1_2:58892876-58892895 | Msa0080610:five_prime_UTR | 25.0% |
AAAGAAGAAGAGATGAAGAA+AGG | + | chr1_2:58889144-58889163 | None:intergenic | 30.0% | |
GGATTAAAACCTAAAACCTT+GGG | + | chr1_2:58889379-58889398 | None:intergenic | 30.0% | |
AGGATTAAAACCTAAAACCT+TGG | + | chr1_2:58889380-58889399 | None:intergenic | 30.0% | |
!! | GTTTTAATCCTTCTCAAAGA+TGG | - | chr1_2:58889389-58889408 | Msa0080610:CDS | 30.0% |
TTTAATCCTTCTCAAAGATG+GGG | - | chr1_2:58889391-58889410 | Msa0080610:CDS | 30.0% | |
TTGTCTTCAACTTCTATCTT+TGG | - | chr1_2:58889636-58889655 | Msa0080610:intron | 30.0% | |
! | GGACACAAAATGATAGTTTT+TGG | - | chr1_2:58890045-58890064 | Msa0080610:CDS | 30.0% |
!! | CACAAAATGATAGTTTTTGG+TGG | - | chr1_2:58890048-58890067 | Msa0080610:CDS | 30.0% |
!!! | ATAGTTTTTGGTGGTACAAA+TGG | - | chr1_2:58890057-58890076 | Msa0080610:CDS | 30.0% |
!!! | TAGTTTTTGGTGGTACAAAT+GGG | - | chr1_2:58890058-58890077 | Msa0080610:CDS | 30.0% |
TTGATCTTTACACCAAAGAA+TGG | - | chr1_2:58890109-58890128 | Msa0080610:CDS | 30.0% | |
TTTAGGCTTAATCCATTCTT+TGG | + | chr1_2:58890124-58890143 | None:intergenic | 30.0% | |
AATAAGCTTATTGTGTATGG+TGG | - | chr1_2:58890360-58890379 | Msa0080610:intron | 30.0% | |
!! | TGATGTTAGTTTGCTTGATA+TGG | - | chr1_2:58890407-58890426 | Msa0080610:intron | 30.0% |
TTGATATGGAAACAATGACT+TGG | - | chr1_2:58890421-58890440 | Msa0080610:CDS | 30.0% | |
CTAGGAGAATAAAACAACAA+TGG | + | chr1_2:58890808-58890827 | None:intergenic | 30.0% | |
! | TAAATCATCACAAGAGTATG+TGG | + | chr1_2:58891044-58891063 | None:intergenic | 30.0% |
CTCTTGTGATGATTTATTTC+AGG | - | chr1_2:58891048-58891067 | Msa0080610:CDS | 30.0% | |
TTGACATACACACTTGTTTA+TGG | - | chr1_2:58891125-58891144 | Msa0080610:intron | 30.0% | |
GACACCGATATTGTTATATA+TGG | - | chr1_2:58891211-58891230 | Msa0080610:intron | 30.0% | |
ACCGATATTGTTATATATGG+CGG | - | chr1_2:58891214-58891233 | Msa0080610:intron | 30.0% | |
TAGGATAAAGCTAATTTGAC+GGG | + | chr1_2:58891249-58891268 | None:intergenic | 30.0% | |
GATAAGTTGTTATGTCCATT+TGG | + | chr1_2:58891433-58891452 | None:intergenic | 30.0% | |
AATGGACATAACAACTTATC+GGG | - | chr1_2:58891433-58891452 | Msa0080610:intron | 30.0% | |
! | AAAGAACTAACAACGTGTTT+TGG | - | chr1_2:58891654-58891673 | Msa0080610:intron | 30.0% |
! | TTTTATTGCCTAGTTTGACT+CGG | + | chr1_2:58892023-58892042 | None:intergenic | 30.0% |
TGAAGATATTGTTCTTGCTT+TGG | + | chr1_2:58892147-58892166 | None:intergenic | 30.0% | |
CAAGAACAATATCTTCATGT+TGG | - | chr1_2:58892150-58892169 | Msa0080610:CDS | 30.0% | |
! | CATGTTGGTGAAGATAAAAA+AGG | - | chr1_2:58892165-58892184 | Msa0080610:CDS | 30.0% |
! | ATCAATTTTGCCAAGAACTT+CGG | + | chr1_2:58892367-58892386 | None:intergenic | 30.0% |
CATTAGAAAACCTGAATCAA+AGG | + | chr1_2:58892394-58892413 | None:intergenic | 30.0% | |
AGCAAATTTCAAAAGCTTAC+AGG | + | chr1_2:58892462-58892481 | None:intergenic | 30.0% | |
GTTACATAAATCGTAGTACT+AGG | + | chr1_2:58892514-58892533 | None:intergenic | 30.0% | |
CTTGATGGAAACAAACAATT+TGG | + | chr1_2:58892573-58892592 | None:intergenic | 30.0% | |
ACACAATACTACATAACTCA+TGG | + | chr1_2:58892907-58892926 | None:intergenic | 30.0% | |
ATATCTAAGTTACCGTTGTA+TGG | + | chr1_2:58892972-58892991 | None:intergenic | 30.0% | |
TATTCAAAATGTCCTTAGGA+TGG | - | chr1_2:58893058-58893077 | Msa0080610:five_prime_UTR | 30.0% | |
TAATCAAATGTTCCATCCTA+AGG | + | chr1_2:58893073-58893092 | None:intergenic | 30.0% | |
TATGTGTGCTGAGAGAAATT+AGG | + | chr1_2:58889703-58889722 | None:intergenic | 35.0% | |
!! | TAATTTTAGGGATGTTGTGG+AGG | - | chr1_2:58889910-58889929 | Msa0080610:intron | 35.0% |
ATGTTTGGACCTTGACAAAA+TGG | - | chr1_2:58889954-58889973 | Msa0080610:CDS | 35.0% | |
TGGATTAAGCCTAAATGTGA+AGG | - | chr1_2:58890129-58890148 | Msa0080610:CDS | 35.0% | |
GGATTAAGCCTAAATGTGAA+GGG | - | chr1_2:58890130-58890149 | Msa0080610:CDS | 35.0% | |
! | GGTGAAAGACTGGTAATTTT+TGG | - | chr1_2:58890198-58890217 | Msa0080610:CDS | 35.0% |
!! | GAAAGACTGGTAATTTTTGG+TGG | - | chr1_2:58890201-58890220 | Msa0080610:CDS | 35.0% |
TAGACCTTAGAACTATGAGA+TGG | - | chr1_2:58890268-58890287 | Msa0080610:CDS | 35.0% | |
! | AACTCCATCTCATAGTTCTA+AGG | + | chr1_2:58890275-58890294 | None:intergenic | 35.0% |
! | AGTTCTTTTCCTGAGGTTAA+AGG | - | chr1_2:58890291-58890310 | Msa0080610:CDS | 35.0% |
AGAGTACAATGACTATCTCT+AGG | + | chr1_2:58890330-58890349 | None:intergenic | 35.0% | |
! | AGTCATTGTACTCTTGCTAT+TGG | - | chr1_2:58890336-58890355 | Msa0080610:intron | 35.0% |
!! | GTCATTGTACTCTTGCTATT+GGG | - | chr1_2:58890337-58890356 | Msa0080610:intron | 35.0% |
GGGAATAAGCTTATTGTGTA+TGG | - | chr1_2:58890357-58890376 | Msa0080610:intron | 35.0% | |
AAAAATCAAGGTTCTTCACC+AGG | - | chr1_2:58890632-58890651 | Msa0080610:intron | 35.0% | |
!!! | AGCCTTTTTTCACGAACAAT+TGG | - | chr1_2:58890976-58890995 | Msa0080610:CDS | 35.0% |
GACCAATTGTTCGTGAAAAA+AGG | + | chr1_2:58890981-58891000 | None:intergenic | 35.0% | |
! | TTTCAGGTATACATCATTGG+AGG | - | chr1_2:58891064-58891083 | Msa0080610:CDS | 35.0% |
TTCAGGTATACATCATTGGA+GGG | - | chr1_2:58891065-58891084 | Msa0080610:CDS | 35.0% | |
AACGTTATTGCAACGACATT+TGG | - | chr1_2:58891098-58891117 | Msa0080610:CDS | 35.0% | |
ACGTTATTGCAACGACATTT+GGG | - | chr1_2:58891099-58891118 | Msa0080610:CDS | 35.0% | |
TGGTCTCAACTTGATATACA+TGG | - | chr1_2:58891145-58891164 | Msa0080610:intron | 35.0% | |
CCCGCCATATATAACAATAT+CGG | + | chr1_2:58891218-58891237 | None:intergenic | 35.0% | |
CCGATATTGTTATATATGGC+GGG | - | chr1_2:58891215-58891234 | Msa0080610:intron | 35.0% | |
!! | TATTGTTATATATGGCGGGT+AGG | - | chr1_2:58891219-58891238 | Msa0080610:intron | 35.0% |
AGGATAAAGCTAATTTGACG+GGG | + | chr1_2:58891248-58891267 | None:intergenic | 35.0% | |
AAAAAGAGCTGCTAAGGAAT+AGG | + | chr1_2:58891268-58891287 | None:intergenic | 35.0% | |
! | TAGTGGTAATGTTAGTTTCC+AGG | - | chr1_2:58891310-58891329 | Msa0080610:intron | 35.0% |
AGGCTATCATAATGAAATCC+TGG | + | chr1_2:58891331-58891350 | None:intergenic | 35.0% | |
ATGGACATAACAACTTATCG+GGG | - | chr1_2:58891434-58891453 | Msa0080610:intron | 35.0% | |
GCAAAGTCTTCAGAAGTTAT+TGG | - | chr1_2:58891458-58891477 | Msa0080610:intron | 35.0% | |
CTACCTGAATCAAATTGACA+CGG | + | chr1_2:58891760-58891779 | None:intergenic | 35.0% | |
TGTTCTTGATCAGATTGAGA+TGG | + | chr1_2:58891949-58891968 | None:intergenic | 35.0% | |
TGTCAACTTGACAATTTCTC+AGG | - | chr1_2:58892054-58892073 | Msa0080610:CDS | 35.0% | |
GAAGTTCTTGGCAAAATTGA+TGG | - | chr1_2:58892366-58892385 | Msa0080610:intron | 35.0% | |
TAATGACTGCAGTAGTGAAT+GGG | - | chr1_2:58892409-58892428 | Msa0080610:intron | 35.0% | |
! | ACATGATTTGAGTTCATGAG+AGG | + | chr1_2:58892600-58892619 | None:intergenic | 35.0% |
TCTCATGAACTCAAATCATG+TGG | - | chr1_2:58892599-58892618 | Msa0080610:intron | 35.0% | |
CAAATCATGTGGATAATTCG+AGG | - | chr1_2:58892610-58892629 | Msa0080610:intron | 35.0% | |
! | GTTCCTTTTATGATTGGAGA+CGG | + | chr1_2:58892708-58892727 | None:intergenic | 35.0% |
! | ACTCCTGATTTTATGTTCTC+CGG | + | chr1_2:58892748-58892767 | None:intergenic | 35.0% |
GGAAATAATGCTTGATCCTT+AGG | - | chr1_2:58892810-58892829 | Msa0080610:CDS | 35.0% | |
GATCCTTAGGTGAAATATTG+AGG | - | chr1_2:58892823-58892842 | Msa0080610:CDS | 35.0% | |
CAAGCTCTTCATCATTAACA+TGG | + | chr1_2:58893024-58893043 | None:intergenic | 35.0% | |
CATGTTAATGATGAAGAGCT+TGG | - | chr1_2:58893022-58893041 | Msa0080610:five_prime_UTR | 35.0% | |
CTCCTAAGAAGAAAGCAATG+TGG | - | chr1_2:58889347-58889366 | Msa0080610:exon | 40.0% | |
AGCCACATTGCTTTCTTCTT+AGG | + | chr1_2:58889352-58889371 | None:intergenic | 40.0% | |
TGGACCTTGACAAAATGGAA+TGG | - | chr1_2:58889959-58889978 | Msa0080610:CDS | 40.0% | |
! | TGCTCCATTCCATTTTGTCA+AGG | + | chr1_2:58889966-58889985 | None:intergenic | 40.0% |
TGACAAAATGGAATGGAGCA+AGG | - | chr1_2:58889966-58889985 | Msa0080610:CDS | 40.0% | |
!!! | CTGGTAATTTTTGGTGGTAG+TGG | - | chr1_2:58890207-58890226 | Msa0080610:CDS | 40.0% |
!!! | ATTTTTGGTGGTAGTGGAGA+AGG | - | chr1_2:58890213-58890232 | Msa0080610:CDS | 40.0% |
! | CAATGACTATCTCTAGGAAC+AGG | + | chr1_2:58890324-58890343 | None:intergenic | 40.0% |
! | ATTGTGTATGGTGGAGATAG+TGG | - | chr1_2:58890369-58890388 | Msa0080610:intron | 40.0% |
! | GATAGTGGTGATCAGTATCA+TGG | - | chr1_2:58890384-58890403 | Msa0080610:intron | 40.0% |
! | TGGAAACAATGACTTGGACT+AGG | - | chr1_2:58890427-58890446 | Msa0080610:CDS | 40.0% |
! | GGAAACAATGACTTGGACTA+GGG | - | chr1_2:58890428-58890447 | Msa0080610:CDS | 40.0% |
AGCTGTGAATGTTGGAACTA+AGG | - | chr1_2:58890673-58890692 | Msa0080610:CDS | 40.0% | |
GTTCGTGAAAAAAGGCTAGA+CGG | + | chr1_2:58890973-58890992 | None:intergenic | 40.0% | |
TCAGGTATACATCATTGGAG+GGG | - | chr1_2:58891066-58891085 | Msa0080610:CDS | 40.0% | |
CGATACAAAAAGAGCTGCTA+AGG | + | chr1_2:58891274-58891293 | None:intergenic | 40.0% | |
! | AGCAGCTCTTTTTGTATCGA+CGG | - | chr1_2:58891275-58891294 | Msa0080610:intron | 40.0% |
GACGGATGTTAGTAAGTTAG+TGG | - | chr1_2:58891293-58891312 | Msa0080610:intron | 40.0% | |
TCAAGAAAAGAAGACCATCC+TGG | - | chr1_2:58891483-58891502 | Msa0080610:CDS | 40.0% | |
GACCAGAAAATTTCGCGTAT+CGG | - | chr1_2:58891676-58891695 | Msa0080610:intron | 40.0% | |
ACCAGAAAATTTCGCGTATC+GGG | - | chr1_2:58891677-58891696 | Msa0080610:intron | 40.0% | |
GGGAATAATGTGGAAGTCTT+GGG | - | chr1_2:58891697-58891716 | Msa0080610:intron | 40.0% | |
ATGTGGAAGTCTTGGGAAAA+TGG | - | chr1_2:58891704-58891723 | Msa0080610:intron | 40.0% | |
TGTGGAAGTCTTGGGAAAAT+GGG | - | chr1_2:58891705-58891724 | Msa0080610:intron | 40.0% | |
CGTGTCAATTTGATTCAGGT+AGG | - | chr1_2:58891758-58891777 | Msa0080610:CDS | 40.0% | |
!!! | GAAGCATTTGGTTTTTGACC+TGG | + | chr1_2:58891976-58891995 | None:intergenic | 40.0% |
AAAACCAAATGCTTCTGCCA+TGG | - | chr1_2:58891981-58892000 | Msa0080610:CDS | 40.0% | |
!! | TTGTCAAGTTGACAAGTGCT+TGG | + | chr1_2:58892048-58892067 | None:intergenic | 40.0% |
TTGAAAGCAAAGGATCTACC+AGG | + | chr1_2:58892245-58892264 | None:intergenic | 40.0% | |
AAGAACTTCGGTACCAATCT+AGG | + | chr1_2:58892355-58892374 | None:intergenic | 40.0% | |
! | TAGATTGGTACCGAAGTTCT+TGG | - | chr1_2:58892354-58892373 | Msa0080610:intron | 40.0% |
ATTGATGGAGCCTTTGATTC+AGG | - | chr1_2:58892381-58892400 | Msa0080610:intron | 40.0% | |
CTAATGACTGCAGTAGTGAA+TGG | - | chr1_2:58892408-58892427 | Msa0080610:intron | 40.0% | |
TGAATAATCTATCAGGGAGC+AGG | - | chr1_2:58892537-58892556 | Msa0080610:intron | 40.0% | |
! | AGCATGTAGTGGTTGCTTTA+GGG | + | chr1_2:58892682-58892701 | None:intergenic | 40.0% |
ACTAATACAGTGTCCTTACC+CGG | - | chr1_2:58892726-58892745 | Msa0080610:intron | 40.0% | |
! | GATTTTATGTTCTCCGGGTA+AGG | + | chr1_2:58892742-58892761 | None:intergenic | 40.0% |
TACCCGGAGAACATAAAATC+AGG | - | chr1_2:58892742-58892761 | Msa0080610:CDS | 40.0% | |
! | CTCCTGATTTTATGTTCTCC+GGG | + | chr1_2:58892747-58892766 | None:intergenic | 40.0% |
! | AAAATCAGGAGTGACTTGCA+AGG | - | chr1_2:58892756-58892775 | Msa0080610:CDS | 40.0% |
!! | CAAGGTTTGGCTTTAACACT+AGG | - | chr1_2:58892774-58892793 | Msa0080610:CDS | 40.0% |
!! | GTTTGGCTTTAACACTAGGA+GGG | - | chr1_2:58892778-58892797 | Msa0080610:CDS | 40.0% |
CAAGCATTATTTCCACTTGC+AGG | + | chr1_2:58892804-58892823 | None:intergenic | 40.0% | |
CCTCCTCAATATTTCACCTA+AGG | + | chr1_2:58892829-58892848 | None:intergenic | 40.0% | |
CCTTAGGTGAAATATTGAGG+AGG | - | chr1_2:58892826-58892845 | Msa0080610:CDS | 40.0% | |
CTAAGTTACCGTTGTATGGT+CGG | + | chr1_2:58892968-58892987 | None:intergenic | 40.0% | |
CTCTGCTGTGATTGTGAATG+TGG | + | chr1_2:58889260-58889279 | None:intergenic | 45.0% | |
! | TGGCTGTATCCCAAGGTTTT+AGG | - | chr1_2:58889367-58889386 | Msa0080610:CDS | 45.0% |
TGGAGCAAGGTTACTACAAC+AGG | - | chr1_2:58889979-58889998 | Msa0080610:CDS | 45.0% | |
ACTACAACAGGTGAAAAGCC+AGG | - | chr1_2:58889991-58890010 | Msa0080610:CDS | 45.0% | |
ACAGCACTATGGCTATCTCT+AGG | + | chr1_2:58890018-58890037 | None:intergenic | 45.0% | |
! | AGCCATAGTGCTGTTCTTGT+AGG | - | chr1_2:58890024-58890043 | Msa0080610:CDS | 45.0% |
GTCCTACAAGAACAGCACTA+TGG | + | chr1_2:58890029-58890048 | None:intergenic | 45.0% | |
GGTGGTATCCCTTCACATTT+AGG | + | chr1_2:58890141-58890160 | None:intergenic | 45.0% | |
AGTCACACTGCTACTCTTGT+TGG | - | chr1_2:58890174-58890193 | Msa0080610:CDS | 45.0% | |
!! | TCTTGTTGGTGGTGAAAGAC+TGG | - | chr1_2:58890188-58890207 | Msa0080610:CDS | 45.0% |
! | GAGATGGAGTTCTTTTCCTG+AGG | - | chr1_2:58890284-58890303 | Msa0080610:CDS | 45.0% |
! | CAATGACTTGGACTAGGGTA+TGG | - | chr1_2:58890433-58890452 | Msa0080610:CDS | 45.0% |
GTATACATCATTGGAGGGGT+CGG | - | chr1_2:58891070-58891089 | Msa0080610:CDS | 45.0% | |
ATACATGGTCAACAGCCACA+AGG | - | chr1_2:58891160-58891179 | Msa0080610:intron | 45.0% | |
GTATGAGAAAACCGTCCTTG+TGG | + | chr1_2:58891178-58891197 | None:intergenic | 45.0% | |
GAAAAGAAGACCATCCTGGA+TGG | - | chr1_2:58891487-58891506 | Msa0080610:CDS | 45.0% | |
TGGCGGAGTAGATACAAACA+CGG | - | chr1_2:58891507-58891526 | Msa0080610:CDS | 45.0% | |
! | TCCCGATACGCGAAATTTTC+TGG | + | chr1_2:58891681-58891700 | None:intergenic | 45.0% |
TTCGCGTATCGGGAATAATG+TGG | - | chr1_2:58891687-58891706 | Msa0080610:intron | 45.0% | |
CGGGAATAATGTGGAAGTCT+TGG | - | chr1_2:58891696-58891715 | Msa0080610:intron | 45.0% | |
GTGGAAGTCTTGGGAAAATG+GGG | - | chr1_2:58891706-58891725 | Msa0080610:intron | 45.0% | |
GTCTTGGGAAAATGGGGTTA+TGG | - | chr1_2:58891712-58891731 | Msa0080610:intron | 45.0% | |
CGACCGTGTCAATTTGATTC+AGG | - | chr1_2:58891754-58891773 | Msa0080610:CDS | 45.0% | |
CAGGAACTTCTCAACAGAAG+AGG | - | chr1_2:58891842-58891861 | Msa0080610:CDS | 45.0% | |
GAACTTCTCAACAGAAGAGG+AGG | - | chr1_2:58891845-58891864 | Msa0080610:CDS | 45.0% | |
! | AATTGCTGCCACAAAGGTGT+GGG | - | chr1_2:58891870-58891889 | Msa0080610:CDS | 45.0% |
TTCAACATCCCACACCTTTG+TGG | + | chr1_2:58891881-58891900 | None:intergenic | 45.0% | |
TGGAGATGAATGCTGAGACA+GGG | + | chr1_2:58891929-58891948 | None:intergenic | 45.0% | |
ATGGAGATGAATGCTGAGAC+AGG | + | chr1_2:58891930-58891949 | None:intergenic | 45.0% | |
TCTGATCAAGAACAGACTCC+AGG | - | chr1_2:58891955-58891974 | Msa0080610:CDS | 45.0% | |
!! | GAATCCATGGCAGAAGCATT+TGG | + | chr1_2:58891988-58892007 | None:intergenic | 45.0% |
! | GTGAATGGGAGACTTTTCAG+AGG | - | chr1_2:58892423-58892442 | Msa0080610:intron | 45.0% |
!! | TTCATGAGAGGCTGACTTGA+TGG | + | chr1_2:58892588-58892607 | None:intergenic | 45.0% |
! | GAGCATGTAGTGGTTGCTTT+AGG | + | chr1_2:58892683-58892702 | None:intergenic | 45.0% |
CGACCGTCTCCAATCATAAA+AGG | - | chr1_2:58892702-58892721 | Msa0080610:intron | 45.0% | |
!! | GGTTTGGCTTTAACACTAGG+AGG | - | chr1_2:58892777-58892796 | Msa0080610:CDS | 45.0% |
!!! | ATTTGATTTAATTTAATTTT+AGG | - | chr1_2:58889897-58889916 | Msa0080610:intron | 5.0% |
!!! | TTTGATTTAATTTAATTTTA+GGG | - | chr1_2:58889898-58889917 | Msa0080610:intron | 5.0% |
!! | ATTAAAATATATATGAATTT+AGG | + | chr1_2:58890782-58890801 | None:intergenic | 5.0% |
AGCAATGTGGCTGTATCCCA+AGG | - | chr1_2:58889360-58889379 | Msa0080610:exon | 50.0% | |
! | GAGTGACCCCATCTTTGAGA+AGG | + | chr1_2:58889400-58889419 | None:intergenic | 50.0% |
!! | CTATGGCTATCTCTAGGACC+TGG | + | chr1_2:58890012-58890031 | None:intergenic | 50.0% |
AAGGGATACCACCTTCACCA+AGG | - | chr1_2:58890148-58890167 | Msa0080610:CDS | 50.0% | |
AGGGATACCACCTTCACCAA+GGG | - | chr1_2:58890149-58890168 | Msa0080610:CDS | 50.0% | |
TGACTTTCCCTTGGTGAAGG+TGG | + | chr1_2:58890159-58890178 | None:intergenic | 50.0% | |
GTGTGACTTTCCCTTGGTGA+AGG | + | chr1_2:58890162-58890181 | None:intergenic | 50.0% | |
GTAGCAGTGTGACTTTCCCT+TGG | + | chr1_2:58890168-58890187 | None:intergenic | 50.0% | |
CACACTGCTACTCTTGTTGG+TGG | - | chr1_2:58890177-58890196 | Msa0080610:CDS | 50.0% | |
GGCACATCACCTTTAACCTC+AGG | + | chr1_2:58890303-58890322 | None:intergenic | 50.0% | |
AAGGTTCTTCACCAGGAGTC+AGG | - | chr1_2:58890639-58890658 | Msa0080610:intron | 50.0% | |
AGGTTCTTCACCAGGAGTCA+GGG | - | chr1_2:58890640-58890659 | Msa0080610:intron | 50.0% | |
GGTCATGCAGCTGTGAATGT+TGG | - | chr1_2:58890665-58890684 | Msa0080610:CDS | 50.0% | |
ATGGTCAACAGCCACAAGGA+CGG | - | chr1_2:58891164-58891183 | Msa0080610:intron | 50.0% | |
! | ATCGGTGTCTGCAACAACAG+CGG | + | chr1_2:58891200-58891219 | None:intergenic | 50.0% |
ACCTGCTACAAGTCAGAGAC+AGG | + | chr1_2:58891351-58891370 | None:intergenic | 50.0% | |
! | TCTCTGACTTGTAGCAGGTG+TGG | - | chr1_2:58891352-58891371 | Msa0080610:intron | 50.0% |
! | CTCTGACTTGTAGCAGGTGT+GGG | - | chr1_2:58891353-58891372 | Msa0080610:intron | 50.0% |
! | TCTGACTTGTAGCAGGTGTG+GGG | - | chr1_2:58891354-58891373 | Msa0080610:intron | 50.0% |
! | CTTGCAGCAGAGCATCCAAA+TGG | - | chr1_2:58891415-58891434 | Msa0080610:intron | 50.0% |
AAGAAGACCATCCTGGATGG+CGG | - | chr1_2:58891490-58891509 | Msa0080610:CDS | 50.0% | |
TTGTATCTACTCCGCCATCC+AGG | + | chr1_2:58891504-58891523 | None:intergenic | 50.0% | |
GAGGAGAATTGCTGCCACAA+AGG | - | chr1_2:58891864-58891883 | Msa0080610:CDS | 50.0% | |
GAATTGCTGCCACAAAGGTG+TGG | - | chr1_2:58891869-58891888 | Msa0080610:CDS | 50.0% | |
GCGATATCGCTGAGAATCCA+TGG | + | chr1_2:58892001-58892020 | None:intergenic | 50.0% | |
CGATATCGCCGAGTCAAACT+AGG | - | chr1_2:58892012-58892031 | Msa0080610:CDS | 50.0% | |
!! | GGTTGCTTTAGGGCATAGCA+CGG | + | chr1_2:58892672-58892691 | None:intergenic | 50.0% |
! | CAGGAGTGACTTGCAAGGTT+TGG | - | chr1_2:58892761-58892780 | Msa0080610:CDS | 50.0% |
CGTATCTGCCGACCATACAA+CGG | - | chr1_2:58892957-58892976 | Msa0080610:five_prime_UTR | 50.0% | |
GGTCACTCTGCTTGCTTCTC+TGG | - | chr1_2:58889412-58889431 | Msa0080610:CDS | 55.0% | |
! | GCCTGTCTCTGACTTGTAGC+AGG | - | chr1_2:58891347-58891366 | Msa0080610:intron | 55.0% |
ATCTACTCCGCCATCCAGGA+TGG | + | chr1_2:58891500-58891519 | None:intergenic | 55.0% | |
!! | GCTTTAGAACCGAAGCCTGC+CGG | - | chr1_2:58892201-58892220 | Msa0080610:CDS | 55.0% |
GTGTTGAGTGTATCCGCGTC+CGG | + | chr1_2:58892223-58892242 | None:intergenic | 55.0% | |
ACGCGGATACACTCAACACC+TGG | - | chr1_2:58892224-58892243 | Msa0080610:CDS | 55.0% | |
TCTTCACCAGGAGTCAGGGC+AGG | - | chr1_2:58890644-58890663 | Msa0080610:intron | 60.0% | |
GGAGACGGTCGAGCATGTAG+TGG | + | chr1_2:58892693-58892712 | None:intergenic | 60.0% | |
ACACTAGGAGGGCCTGCAAG+TGG | - | chr1_2:58892789-58892808 | Msa0080610:CDS | 60.0% | |
GCATGACCTGCCCTGACTCC+TGG | + | chr1_2:58890653-58890672 | None:intergenic | 65.0% | |
TATCCGCGTCCGGCAGGCTT+CGG | + | chr1_2:58892213-58892232 | None:intergenic | 65.0% | |
TGAGTGTATCCGCGTCCGGC+AGG | + | chr1_2:58892219-58892238 | None:intergenic | 65.0% | |
GAACCGAAGCCTGCCGGACG+CGG | - | chr1_2:58892207-58892226 | Msa0080610:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1_2 | gene | 58889070 | 58893118 | 58889070 | ID=Msa0080610;Name=Msa0080610 |
chr1_2 | mRNA | 58889070 | 58893118 | 58889070 | ID=Msa0080610-mRNA-1;Parent=Msa0080610;Name=Msa0080610-mRNA-1;_AED=0.10;_eAED=0.10;_QI=255|0.87|0.88|1|1|1|9|294|649 |
chr1_2 | exon | 58889070 | 58889636 | 58889070 | ID=Msa0080610-mRNA-1:exon:19044;Parent=Msa0080610-mRNA-1 |
chr1_2 | exon | 58889727 | 58889831 | 58889727 | ID=Msa0080610-mRNA-1:exon:19043;Parent=Msa0080610-mRNA-1 |
chr1_2 | exon | 58889943 | 58890343 | 58889943 | ID=Msa0080610-mRNA-1:exon:19042;Parent=Msa0080610-mRNA-1 |
chr1_2 | exon | 58890413 | 58890506 | 58890413 | ID=Msa0080610-mRNA-1:exon:19041;Parent=Msa0080610-mRNA-1 |
chr1_2 | exon | 58890660 | 58890819 | 58890660 | ID=Msa0080610-mRNA-1:exon:19040;Parent=Msa0080610-mRNA-1 |
chr1_2 | exon | 58890952 | 58891118 | 58890952 | ID=Msa0080610-mRNA-1:exon:19039;Parent=Msa0080610-mRNA-1 |
chr1_2 | exon | 58891473 | 58891559 | 58891473 | ID=Msa0080610-mRNA-1:exon:19038;Parent=Msa0080610-mRNA-1 |
chr1_2 | exon | 58891739 | 58892269 | 58891739 | ID=Msa0080610-mRNA-1:exon:19037;Parent=Msa0080610-mRNA-1 |
chr1_2 | exon | 58892732 | 58893118 | 58892732 | ID=Msa0080610-mRNA-1:exon:19036;Parent=Msa0080610-mRNA-1 |
chr1_2 | five_prime_UTR | 58892864 | 58893118 | 58892864 | ID=Msa0080610-mRNA-1:five_prime_utr;Parent=Msa0080610-mRNA-1 |
chr1_2 | CDS | 58892732 | 58892863 | 58892732 | ID=Msa0080610-mRNA-1:cds;Parent=Msa0080610-mRNA-1 |
chr1_2 | CDS | 58891739 | 58892269 | 58891739 | ID=Msa0080610-mRNA-1:cds;Parent=Msa0080610-mRNA-1 |
chr1_2 | CDS | 58891473 | 58891559 | 58891473 | ID=Msa0080610-mRNA-1:cds;Parent=Msa0080610-mRNA-1 |
chr1_2 | CDS | 58890952 | 58891118 | 58890952 | ID=Msa0080610-mRNA-1:cds;Parent=Msa0080610-mRNA-1 |
chr1_2 | CDS | 58890660 | 58890819 | 58890660 | ID=Msa0080610-mRNA-1:cds;Parent=Msa0080610-mRNA-1 |
chr1_2 | CDS | 58890413 | 58890506 | 58890413 | ID=Msa0080610-mRNA-1:cds;Parent=Msa0080610-mRNA-1 |
chr1_2 | CDS | 58889943 | 58890343 | 58889943 | ID=Msa0080610-mRNA-1:cds;Parent=Msa0080610-mRNA-1 |
chr1_2 | CDS | 58889727 | 58889831 | 58889727 | ID=Msa0080610-mRNA-1:cds;Parent=Msa0080610-mRNA-1 |
chr1_2 | CDS | 58889364 | 58889636 | 58889364 | ID=Msa0080610-mRNA-1:cds;Parent=Msa0080610-mRNA-1 |
chr1_2 | three_prime_UTR | 58889070 | 58889363 | 58889070 | ID=Msa0080610-mRNA-1:three_prime_utr;Parent=Msa0080610-mRNA-1 |
Gene Sequence |
Protein sequence |