AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0128460

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0128460 MtrunA17_Chr1g0194861 84.615 104 16 0 4 107 1243 1346 7.32e-58 191
Msa0128460 MtrunA17_Chr1g0194861 83.019 106 16 1 4 107 1138 1243 1.77e-55 184
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 312 sgRNAs with CRISPR-Local

Find 700 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGAAGAGTCTTTACCCTTAT+TGG 0.075467 1_3:-58187771 None:intergenic
GTTTGGGTGCTACTGCATTT+TGG 0.133192 1_3:-58191034 None:intergenic
GATTTCCTGGTCTTGATAAT+TGG 0.143495 1_3:+58188791 Msa0128460:five_prime_UTR
CTTTGCAGCTGTGGTCTTCT+TGG 0.147073 1_3:-58189385 None:intergenic
CACATTTGGGCGACCCTTAA+TGG 0.150768 1_3:+58191251 Msa0128460:exon
ACTTGTGGACCAGTAGAATT+TGG 0.162831 1_3:-58187737 None:intergenic
TCCATCTATATCAGAATTTA+AGG 0.164801 1_3:+58189695 Msa0128460:five_prime_UTR
AATTTCTCTGTCCTCCTTAT+AGG 0.170617 1_3:-58189870 None:intergenic
AAAATAAAACATGTGGTTTC+AGG 0.179171 1_3:-58189729 None:intergenic
AAATCGGAAAAGGCAGTATT+TGG 0.201132 1_3:+58189417 Msa0128460:five_prime_UTR
TATACTCGCTTTCTTGATAC+TGG 0.214753 1_3:+58190599 Msa0128460:five_prime_UTR
ATTTGTTAACATCAAGGATT+TGG 0.217175 1_3:-58189035 None:intergenic
AAAAGTCAATAAAAGTAAAA+AGG 0.225243 1_3:+58191542 Msa0128460:CDS
ACAGGTCATGGTGCCTTCTA+TGG 0.228805 1_3:+58190176 Msa0128460:five_prime_UTR
AAAACCCAATAAAAGGAAAA+AGG 0.231177 1_3:+58191072 Msa0128460:five_prime_UTR
AAATGACCTAAAATCCATTA+AGG 0.235019 1_3:-58191265 None:intergenic
TCTTGTGTAACTTAACTTCT+TGG 0.243171 1_3:-58188047 None:intergenic
GCCTCATCTCTTGTCTCATT+TGG 0.250185 1_3:-58189450 None:intergenic
TCATTCTTTGAATTCTTTCC+TGG 0.251009 1_3:-58188766 None:intergenic
TTCAACAGCCGCCACTTTCT+TGG 0.251038 1_3:-58190146 None:intergenic
GGTGTTCATTTCGCTCTCTT+TGG 0.264409 1_3:+58182763 Msa0128460:five_prime_UTR
AGTCCCCTAGGTTCAAAATT+TGG 0.268181 1_3:+58187656 Msa0128460:five_prime_UTR
TAAAGATTTGGATGGAATTC+CGG 0.270747 1_3:+58185550 Msa0128460:five_prime_UTR
CAGACAGTGACATTTCTTTC+AGG 0.274545 1_3:-58189485 None:intergenic
TCCTTAGACTTGATATTTGC+TGG 0.278398 1_3:-58189660 None:intergenic
ATTCGATTCAAGCTTGTTAA+TGG 0.292549 1_3:+58182908 Msa0128460:five_prime_UTR
TTCTGCCTTACTTTGATGTT+TGG 0.298597 1_3:-58191289 None:intergenic
TGCTATTTCTTTGCTTCTGC+TGG 0.302908 1_3:-58188980 None:intergenic
AAATCTTGATTTACACATTT+GGG 0.312386 1_3:+58191238 Msa0128460:five_prime_UTR
GTACAGACCGCTTAAAGATT+TGG 0.314245 1_3:+58185538 Msa0128460:five_prime_UTR
TAAATCTTGATTTACACATT+TGG 0.315182 1_3:+58191237 Msa0128460:five_prime_UTR
CCTTGATGTTAACAAATTGA+TGG 0.316106 1_3:+58189041 Msa0128460:five_prime_UTR
TATTCTAGGAAGAACCAAAA+AGG 0.316958 1_3:+58188130 Msa0128460:five_prime_UTR
TTTGTTAACATCAAGGATTT+GGG 0.318611 1_3:-58189034 None:intergenic
GATTCCAAGCTGGGGCAATC+AGG 0.318812 1_3:+58187614 Msa0128460:five_prime_UTR
CCAGGATCGGGATGACATTA+TGG 0.318910 1_3:+58185613 Msa0128460:five_prime_UTR
AAAGATTTGGATGGAATTCC+GGG 0.320376 1_3:+58185551 Msa0128460:five_prime_UTR
CTCTTGTTATATTTGTCTTC+AGG 0.325234 1_3:-58186879 None:intergenic
TTCCAGGATATTGACATTAC+TGG 0.328872 1_3:+58187971 Msa0128460:intron
TCTGTCCTCCTTATAGGATC+TGG 0.341349 1_3:-58189864 None:intergenic
TAATCTGCGTGATGACAATT+TGG 0.341472 1_3:+58188021 Msa0128460:five_prime_UTR
GTATCAAGAAAGCGAGTATA+AGG 0.343349 1_3:-58190596 None:intergenic
TCTTTACCCTTATTGGCATT+TGG 0.346613 1_3:-58187764 None:intergenic
GAGGATTGCAGCAATCGATA+TGG 0.347128 1_3:-58191452 None:intergenic
GCCAGCAAATATCAAGTCTA+AGG 0.349651 1_3:+58189659 Msa0128460:five_prime_UTR
GCCTTAAATTCTGATATAGA+TGG 0.350253 1_3:-58189696 None:intergenic
TCATAGCTCCAGATCCTATA+AGG 0.358776 1_3:+58189856 Msa0128460:five_prime_UTR
GCATGACATCTCCTCTTTCC+AGG 0.359580 1_3:-58190907 None:intergenic
TCTGCATGTGTTGAAGGTTC+TGG 0.362025 1_3:+58188253 Msa0128460:five_prime_UTR
GATTCTGCATTTCCTGAGAT+AGG 0.362624 1_3:-58188580 None:intergenic
AAACCATGCTCTTCATCATT+TGG 0.365260 1_3:-58189588 None:intergenic
CAGCTGTTCCTGAGGAGGAT+TGG 0.366522 1_3:+58191005 Msa0128460:five_prime_UTR
ATTTCCTGGTCTTGATAATT+GGG 0.369870 1_3:+58188792 Msa0128460:five_prime_UTR
TCAAAGAATGAAGGATTTCC+TGG 0.374952 1_3:+58188778 Msa0128460:five_prime_UTR
TCTTGGAGCCTCCATATTGA+TGG 0.375100 1_3:-58190129 None:intergenic
TGCAAAGAAGTTAGCGAAAT+CGG 0.379072 1_3:+58189401 Msa0128460:five_prime_UTR
TTGCGCGGTGACTTTCTAAT+CGG 0.381507 1_3:-58188841 None:intergenic
GTTGAGTACGTCTGCAAGCC+GGG 0.382287 1_3:+58190722 Msa0128460:five_prime_UTR
CGAGAAGACTTGAATTGAAA+TGG 0.386129 1_3:-58182654 None:intergenic
GATTTGGTTGTCTGCTTGAC+TGG 0.387720 1_3:+58185581 Msa0128460:five_prime_UTR
CTAATATGCTACAAATTTGA+AGG 0.393357 1_3:+58185796 Msa0128460:five_prime_UTR
TGTTAATTTCTTCAGCTTGA+AGG 0.393387 1_3:+58186842 Msa0128460:intron
TCAGCTGCCAAGAGAACTTT+GGG 0.395676 1_3:+58188868 Msa0128460:five_prime_UTR
TGAGGACGGTGCCATCAATA+TGG 0.395743 1_3:+58190118 Msa0128460:five_prime_UTR
AATTCCGGGTGCAAAAGATT+TGG 0.397200 1_3:+58185565 Msa0128460:five_prime_UTR
AAATCGACACGTGGCATGCC+AGG 0.401546 1_3:-58190644 None:intergenic
CTGATTTGTGGTGATGAAAC+TGG 0.403537 1_3:+58191405 Msa0128460:CDS
AATCGGAAAAGGCAGTATTT+GGG 0.404273 1_3:+58189418 Msa0128460:five_prime_UTR
ATCACCGTTGGCTGGAAGAT+TGG 0.404581 1_3:+58186697 Msa0128460:five_prime_UTR
TTCTCATCAGTGGTCATATC+AGG 0.407810 1_3:+58189824 Msa0128460:five_prime_UTR
ATTTCTTCAGCTTGAAGGAT+TGG 0.411153 1_3:+58186847 Msa0128460:intron
ATTTGCAAAACTTCAAAGTA+AGG 0.412007 1_3:+58190799 Msa0128460:five_prime_UTR
CTTAAGCGTGCGGTCAAAGC+TGG 0.412816 1_3:+58190545 Msa0128460:five_prime_UTR
TTTCTTCAGCTTGAAGGATT+GGG 0.414914 1_3:+58186848 Msa0128460:intron
GAGATTTACCATTTGTTAGT+GGG 0.417900 1_3:-58188411 None:intergenic
CTTGTGGACCAGTAGAATTT+GGG 0.418686 1_3:-58187736 None:intergenic
GGGATGCGCATTGTTGTATA+TGG 0.419008 1_3:+58190197 Msa0128460:five_prime_UTR
TGAGATTTACCATTTGTTAG+TGG 0.420188 1_3:-58188412 None:intergenic
CTTTATTGTGGCCAATCTCT+TGG 0.421271 1_3:-58186667 None:intergenic
AGCAAAGAAATAGCAACTTC+TGG 0.422190 1_3:+58188988 Msa0128460:five_prime_UTR
TCTACTTCACATTTGTCATC+TGG 0.424117 1_3:-58189138 None:intergenic
CACTCTTCGCGAGTCTTTCG+CGG 0.424802 1_3:+58182742 Msa0128460:five_prime_UTR
TGATGAAGAGCATGGTTTAG+AGG 0.426899 1_3:+58189593 Msa0128460:five_prime_UTR
TTCTGGTGTGAAGGAGCGTC+AGG 0.432151 1_3:+58189005 Msa0128460:five_prime_UTR
AACAATGCGCATCCCATAGA+AGG 0.432187 1_3:-58190189 None:intergenic
TGGCATGCCAGGGCTAACTA+TGG 0.435261 1_3:-58190633 None:intergenic
AATGGCTCCGGATGAAGAAT+TGG 0.436222 1_3:+58189167 Msa0128460:five_prime_UTR
ACTGGAAATACAAATTCATC+TGG 0.437293 1_3:+58187989 Msa0128460:five_prime_UTR
TTCAAGCTTGTTAATGGCGG+TGG 0.438677 1_3:+58182914 Msa0128460:five_prime_UTR
GTCAGCTGCCAAGAGAACTT+TGG 0.438819 1_3:+58188867 Msa0128460:five_prime_UTR
TAGAAAACTGTGCACCCATC+AGG 0.438898 1_3:-58185744 None:intergenic
TTTCTTTCTGTTGACAAAGA+TGG 0.441291 1_3:+58188484 Msa0128460:five_prime_UTR
TCAGACAATGGTTGGCCTGA+TGG 0.442786 1_3:+58185729 Msa0128460:intron
CCCTTCCACCAAGGTAGAAA+AGG 0.443209 1_3:+58188213 Msa0128460:five_prime_UTR
TTAGAGGAGAGAAGAAATGT+TGG 0.444297 1_3:+58189609 Msa0128460:five_prime_UTR
CCATCAATTTGTTAACATCA+AGG 0.444383 1_3:-58189041 None:intergenic
TGCCACTCATAAGGCTCCTC+TGG 0.446343 1_3:-58190080 None:intergenic
CAGCTATTCCCGAGGAGGAT+TGG 0.447918 1_3:+58191481 Msa0128460:CDS
TTCCCTCTTCAGACAATGGT+TGG 0.449094 1_3:+58185721 Msa0128460:intron
ACTGTACGGCACTCATGCTT+TGG 0.452603 1_3:+58190766 Msa0128460:five_prime_UTR
ATACTCGCTTTCTTGATACT+GGG 0.453049 1_3:+58190600 Msa0128460:five_prime_UTR
GACAAATGTGAAGTAGAGTT+GGG 0.453783 1_3:+58189144 Msa0128460:five_prime_UTR
GCATGCCACGTGTCGATTTG+TGG 0.463323 1_3:+58190648 Msa0128460:five_prime_UTR
TCTTCTGCATACTCACTAAC+CGG 0.463631 1_3:-58189072 None:intergenic
CGCTAACTTCTTTGCAGCTG+TGG 0.465086 1_3:-58189394 None:intergenic
TCGGTGCTACGAGTTATTCT+AGG 0.468156 1_3:+58188116 Msa0128460:five_prime_UTR
GCATTTGATAAGCCTATCTC+AGG 0.468199 1_3:+58188568 Msa0128460:five_prime_UTR
CAGACAATGGTTGGCCTGAT+GGG 0.468396 1_3:+58185730 Msa0128460:intron
ATCAAATCTGCATGTGTTGA+AGG 0.468581 1_3:+58188247 Msa0128460:five_prime_UTR
AAATAACTTAAATACTTGCT+TGG 0.468731 1_3:+58188510 Msa0128460:five_prime_UTR
ATTCCAAGCTGGGGCAATCA+GGG 0.469861 1_3:+58187615 Msa0128460:five_prime_UTR
TTTCCAGGGATCCACATACT+TGG 0.474283 1_3:-58190892 None:intergenic
TTGTGTTGTAGCGGACTACT+TGG 0.476668 1_3:+58190700 Msa0128460:five_prime_UTR
CGATCATCTCACAGAAAACA+AGG 0.477136 1_3:+58182789 Msa0128460:five_prime_UTR
CCATAATGTCATCCCGATCC+TGG 0.479361 1_3:-58185613 None:intergenic
AATGACCTAAAATCCATTAA+GGG 0.479559 1_3:-58191264 None:intergenic
CATGCCACGTGTCGATTTGT+GGG 0.481317 1_3:+58190649 Msa0128460:five_prime_UTR
CTGCATGTGTTGAAGGTTCT+GGG 0.482604 1_3:+58188254 Msa0128460:five_prime_UTR
TGACAAATGTGAAGTAGAGT+TGG 0.483171 1_3:+58189143 Msa0128460:five_prime_UTR
TAATGGCGGTGGAGTTGATG+TGG 0.483230 1_3:+58182925 Msa0128460:five_prime_UTR
GGGCAAAACCAATCCTCCTC+GGG 0.485220 1_3:-58191489 None:intergenic
TTGATCTACTACCCTGGAAA+AGG 0.486609 1_3:-58188158 None:intergenic
GATGTTGGTGACTGCATTGT+GGG 0.486729 1_3:+58183122 Msa0128460:five_prime_UTR
TGGCTATCTACGCCAGGATC+GGG 0.488311 1_3:+58185601 Msa0128460:five_prime_UTR
GGGACAGACTCACTTTGCCT+TGG 0.490392 1_3:-58191110 None:intergenic
ACTAGAAATGATGGCGGAAG+AGG 0.490800 1_3:+58187565 Msa0128460:five_prime_UTR
GCTAGTTAATCACCGTTGGC+TGG 0.491106 1_3:+58186689 Msa0128460:five_prime_UTR
AGATGAACCAATTCTTCATC+CGG 0.491955 1_3:-58189174 None:intergenic
TTTCCCGCGATCCACATACT+TGG 0.492525 1_3:-58191368 None:intergenic
GTACGAGCTTGCCAAGAGAT+TGG 0.493559 1_3:+58186656 Msa0128460:five_prime_UTR
TCTAGAACCCAAAGTTCTCT+TGG 0.493789 1_3:-58188875 None:intergenic
TAGAGGAGAGAAGAAATGTT+GGG 0.493960 1_3:+58189610 Msa0128460:five_prime_UTR
GGTTGAGTACGTCTGCAAGC+CGG 0.501698 1_3:+58190721 Msa0128460:five_prime_UTR
GAAGGTTCTGGGAAAGAAAC+TGG 0.504396 1_3:+58188265 Msa0128460:five_prime_UTR
CAAACCGAGGTAGCATCAAC+AGG 0.505536 1_3:-58183171 None:intergenic
TGGCCATCGCCTACAGAGAA+AGG 0.506713 1_3:+58189755 Msa0128460:five_prime_UTR
GCACTCATGCTTTGGCAGAT+AGG 0.508633 1_3:+58190774 Msa0128460:five_prime_UTR
AATGGCGGTGGAGTTGATGT+GGG 0.509620 1_3:+58182926 Msa0128460:five_prime_UTR
GAGGCGGAAGATTCCAAGCT+GGG 0.509729 1_3:+58187605 Msa0128460:five_prime_UTR
ATTTACCAAACATCAAAGTA+AGG 0.510575 1_3:+58191284 Msa0128460:CDS
TTTCTTAAGTGCTAGTAGCC+AGG 0.510576 1_3:+58190043 Msa0128460:five_prime_UTR
GGGCAAAACCAATCCTCCTC+AGG 0.510620 1_3:-58191013 None:intergenic
AAAACTACTCAGCGAGATGA+AGG 0.510675 1_3:+58188946 Msa0128460:five_prime_UTR
GATGAGCCACCTGTGTCTGA+TGG 0.510751 1_3:+58188460 Msa0128460:five_prime_UTR
CAGGTCATGGTGCCTTCTAT+GGG 0.513908 1_3:+58190177 Msa0128460:five_prime_UTR
TGATCAAGCGTTTGAAAGGA+AGG 0.513959 1_3:+58189790 Msa0128460:five_prime_UTR
GTTCTTATCACAGGACGATC+CGG 0.515315 1_3:+58183071 Msa0128460:intron
ATAATTCATTGCCTCAAAAG+AGG 0.515513 1_3:+58188311 Msa0128460:five_prime_UTR
GGAGATTTGATGCTGATTTG+TGG 0.515683 1_3:+58191393 Msa0128460:CDS
GAAGTTAGCGAAATCGGAAA+AGG 0.517733 1_3:+58189407 Msa0128460:five_prime_UTR
TTAATCAAGTCTAAAGATAG+TGG 0.518083 1_3:+58188655 Msa0128460:five_prime_UTR
GGCAGAAGAGATTATTGAGG+AGG 0.521403 1_3:+58190820 Msa0128460:five_prime_UTR
AGGATTGCAGCAATCGATAT+GGG 0.522430 1_3:-58191451 None:intergenic
GGAAAGAATTCAAAGAATGA+AGG 0.523294 1_3:+58188769 Msa0128460:five_prime_UTR
TCAACTTCTACAAGTGCTGA+TGG 0.523391 1_3:+58188070 Msa0128460:five_prime_UTR
CTGGCTATCTACGCCAGGAT+CGG 0.524351 1_3:+58185600 Msa0128460:five_prime_UTR
TTTGGCACAGCTGTGACTCA+TGG 0.524555 1_3:+58187674 Msa0128460:five_prime_UTR
CGTGCGGTCAAAGCTGGAGA+TGG 0.526398 1_3:+58190551 Msa0128460:five_prime_UTR
ATCAAATGCCAATGTGTTGG+AGG 0.526782 1_3:-58188554 None:intergenic
GAGTGAAACACACAATGAGC+AGG 0.527202 1_3:-58191178 None:intergenic
GTGATTAACTAGCTTTATTG+TGG 0.528417 1_3:-58186679 None:intergenic
GGCTAAGGATTCTGAGGATG+AGG 0.530245 1_3:+58187586 Msa0128460:five_prime_UTR
AATGAGACAAGAGATGAGGC+AGG 0.530559 1_3:+58189453 Msa0128460:five_prime_UTR
AATGATGGCGGAAGAGGCTA+AGG 0.533098 1_3:+58187571 Msa0128460:five_prime_UTR
AAAGCCATCCCAAATTCTAC+TGG 0.533698 1_3:+58187728 Msa0128460:five_prime_UTR
AGATTTACCATTTGTTAGTG+GGG 0.534103 1_3:-58188410 None:intergenic
CGTACAGTACGTGTCTCTCA+AGG 0.534451 1_3:-58190751 None:intergenic
GTATGTGGATCGCGGGAAAG+AGG 0.535687 1_3:+58191372 Msa0128460:CDS
AAAGACTCTTCGATTACTAC+AGG 0.536651 1_3:+58187782 Msa0128460:five_prime_UTR
CTTGACTGGCTATCTACGCC+AGG 0.538587 1_3:+58185595 Msa0128460:five_prime_UTR
GGTTCCATTGGCTGTGGAGT+GGG 0.539135 1_3:+58191426 Msa0128460:CDS
TCCGCTGGCAGCTGTTCCTG+AGG 0.539542 1_3:+58190997 Msa0128460:five_prime_UTR
GGTGATGAAACTGGTTCCAT+TGG 0.539624 1_3:+58191414 Msa0128460:CDS
TGGGCAAAACCAATCCTCCT+CGG 0.539703 1_3:-58191490 None:intergenic
GAAGTTAGAAGCAGTTGACC+AGG 0.539770 1_3:+58189227 Msa0128460:five_prime_UTR
CAGGTGATCAAGCGTTTGAA+AGG 0.545429 1_3:+58189786 Msa0128460:five_prime_UTR
AGTAGAGTTGGGAATGGCTC+CGG 0.546272 1_3:+58189155 Msa0128460:five_prime_UTR
TTAAGTGCTAGTAGCCAGGC+AGG 0.547195 1_3:+58190047 Msa0128460:five_prime_UTR
TTCACATTGATCTACTACCC+TGG 0.547336 1_3:-58188164 None:intergenic
GAAAGTGGTTCCGTTGGCTG+TGG 0.549655 1_3:+58190944 Msa0128460:five_prime_UTR
TACATGTTGACAGATTCAAA+AGG 0.552384 1_3:-58191131 None:intergenic
TGTGTTGCTGCGAGAGAGGA+TGG 0.552898 1_3:+58183096 Msa0128460:five_prime_UTR
TTGCCAAGTATGTGGATCCC+TGG 0.553257 1_3:+58190889 Msa0128460:five_prime_UTR
TAAGGCAGAAGAGATTATTG+AGG 0.553441 1_3:+58190817 Msa0128460:five_prime_UTR
ACAGAGAAAGGAGTTTCAGC+AGG 0.553933 1_3:+58189767 Msa0128460:five_prime_UTR
CTTATCAAATGCCAATGTGT+TGG 0.554180 1_3:-58188557 None:intergenic
GTTGATGTGGGGAAGAACAC+TGG 0.554212 1_3:+58182938 Msa0128460:five_prime_UTR
TTGGGTTCTAGACCCAGAAA+AGG 0.554581 1_3:+58188886 Msa0128460:five_prime_UTR
GGAGATGTCATGCTGATTTG+TGG 0.554732 1_3:+58190917 Msa0128460:five_prime_UTR
CGACTGCTGCGATCCTCCGC+TGG 0.556838 1_3:+58190982 Msa0128460:five_prime_UTR
TAAGCCGTTGGTCGCAAACA+AGG 0.557591 1_3:+58185765 Msa0128460:five_prime_UTR
GTAACCTTGTTTGCGACCAA+CGG 0.557635 1_3:-58185769 None:intergenic
GACTATGCCATAGTTAGCCC+TGG 0.558059 1_3:+58190626 Msa0128460:five_prime_UTR
AAATTGTCATCACGCAGATT+AGG 0.560313 1_3:-58188019 None:intergenic
GGTACCCACTCCACAGCCAA+TGG 0.560665 1_3:-58191430 None:intergenic
CATGACATCTCCTCTTTCCA+GGG 0.561920 1_3:-58190906 None:intergenic
TTGCCAAGTATGTGGATCGC+GGG 0.563072 1_3:+58191365 Msa0128460:CDS
TCCTCAGGAACAGCTGCCAG+CGG 0.564075 1_3:-58190998 None:intergenic
GCTGAAACTCCTTTCTCTGT+AGG 0.564808 1_3:-58189764 None:intergenic
AGAAACTGGTGTTATTCAAG+AGG 0.565350 1_3:+58188279 Msa0128460:five_prime_UTR
AGACCGCTTAAAGATTTGGA+TGG 0.566779 1_3:+58185542 Msa0128460:five_prime_UTR
GGTTCCGTTGGCTGTGGAGT+GGG 0.567218 1_3:+58190950 Msa0128460:five_prime_UTR
ACATGTTGACAGATTCAAAA+GGG 0.569677 1_3:-58191130 None:intergenic
CGAGGAGGTCATTCCTCATG+AGG 0.570925 1_3:+58191320 Msa0128460:CDS
TCAGGAACAGCTGCCAGCGG+AGG 0.571501 1_3:-58190995 None:intergenic
TGAGGCGGAAGATTCCAAGC+TGG 0.572135 1_3:+58187604 Msa0128460:five_prime_UTR
GGGTGCATTGTCTTCATCCA+AGG 0.576286 1_3:+58191093 Msa0128460:five_prime_UTR
ACTATAAGCAAAAGTCCCCT+AGG 0.576594 1_3:+58187644 Msa0128460:five_prime_UTR
AATAGCAACTTCTGGTGTGA+AGG 0.576721 1_3:+58188996 Msa0128460:five_prime_UTR
CATCTTGAGTGTTCATCACC+AGG 0.578167 1_3:+58188748 Msa0128460:five_prime_UTR
GCCACTTAAAATAAAACATG+TGG 0.579555 1_3:-58189736 None:intergenic
CTGAAGACAAATATAACAAG+AGG 0.579867 1_3:+58186880 Msa0128460:five_prime_UTR
CTGATTTGTGGTGATGAAAG+TGG 0.580324 1_3:+58190929 Msa0128460:five_prime_UTR
GTATGTGGATCCCTGGAAAG+AGG 0.581862 1_3:+58190896 Msa0128460:five_prime_UTR
TTCTAACTTCTCTTCTGCCG+AGG 0.582112 1_3:-58189214 None:intergenic
TAAAGCTAGTTAATCACCGT+TGG 0.584487 1_3:+58186685 Msa0128460:five_prime_UTR
GAAACTGGTTCCATTGGCTG+TGG 0.584504 1_3:+58191420 Msa0128460:CDS
CTTGAGAGACACGTACTGTA+CGG 0.584559 1_3:+58190752 Msa0128460:five_prime_UTR
CGGCTGTTGAAAGAAAGAAC+AGG 0.584901 1_3:+58190158 Msa0128460:five_prime_UTR
AGTGAGTATGCAGAAGATGC+TGG 0.586456 1_3:+58189078 Msa0128460:five_prime_UTR
AATGCCTGTTGATGCTACCT+CGG 0.587295 1_3:+58183167 Msa0128460:five_prime_UTR
TTACCTTCCTGATGCAGTAG+CGG 0.587895 1_3:-58189898 None:intergenic
CTAACAAATGGTAAATCTCA+AGG 0.589314 1_3:+58188415 Msa0128460:five_prime_UTR
GATATAGCTTGCCAAGTATG+TGG 0.590227 1_3:+58190881 Msa0128460:five_prime_UTR
TCCAAGCTGGGGCAATCAGG+GGG 0.590436 1_3:+58187617 Msa0128460:five_prime_UTR
GAGTTCTCACTTATATCAGA+AGG 0.591107 1_3:-58189510 None:intergenic
CGATTCAAGCTTGTTAATGG+CGG 0.592256 1_3:+58182911 Msa0128460:five_prime_UTR
ACTCCTTTCTCTGTAGGCGA+TGG 0.592552 1_3:-58189758 None:intergenic
GCTCAAGGGACAGACTCACT+TGG 0.593309 1_3:-58191586 None:intergenic
GGGTGCATTATCTTCATCAA+AGG 0.593538 1_3:+58191563 Msa0128460:CDS
TTGAAAGAAAGAACAGGTCA+TGG 0.594190 1_3:+58190164 Msa0128460:five_prime_UTR
TACTCGCTTTCTTGATACTG+GGG 0.595273 1_3:+58190601 Msa0128460:five_prime_UTR
ATATGGAGGCTCCAAGAAAG+TGG 0.595831 1_3:+58190135 Msa0128460:five_prime_UTR
AGCTTCTGCCTCCAACACAT+TGG 0.597432 1_3:+58188546 Msa0128460:five_prime_UTR
GATGTAGCTTGCCAAGTATG+TGG 0.597538 1_3:+58191357 Msa0128460:CDS
GAGGTTGAGTCTAACTCTGA+AGG 0.599018 1_3:-58189315 None:intergenic
TTCCAAGCTGGGGCAATCAG+GGG 0.599814 1_3:+58187616 Msa0128460:five_prime_UTR
AGATGTTGGTGACTGCATTG+TGG 0.600644 1_3:+58183121 Msa0128460:five_prime_UTR
GCTGGCAGCTGTTCCTGAGG+AGG 0.600700 1_3:+58191000 Msa0128460:five_prime_UTR
GTCAAAATCTCTAAGAGAGG+AGG 0.602945 1_3:+58187700 Msa0128460:five_prime_UTR
TGGACCAGTAGAATTTGGGA+TGG 0.603738 1_3:-58187732 None:intergenic
TAGTGGTGAGCCTGATGCAA+CGG 0.604279 1_3:+58188672 Msa0128460:five_prime_UTR
TGGTTCCGTTGGCTGTGGAG+TGG 0.604568 1_3:+58190949 Msa0128460:five_prime_UTR
CAAGGTAGAAAAGGCAAGTG+AGG 0.606134 1_3:+58188222 Msa0128460:five_prime_UTR
ACACAATGAGCAGGGACTAA+CGG 0.606824 1_3:-58191169 None:intergenic
GATCAAGCGTTTGAAAGGAA+GGG 0.612539 1_3:+58189791 Msa0128460:five_prime_UTR
GTTGAACATAGTGCTGATGT+TGG 0.612914 1_3:+58183144 Msa0128460:five_prime_UTR
AAATCCCAATTATCAAGACC+AGG 0.613763 1_3:-58188796 None:intergenic
TTCAAATAAAGTAGACACCT+CGG 0.614340 1_3:+58189197 Msa0128460:five_prime_UTR
TTGGCAGCTGACTTCTTGCG+CGG 0.614710 1_3:-58188856 None:intergenic
AGTACCCACTCCACAGCCAA+CGG 0.616922 1_3:-58190954 None:intergenic
TCATCGTCGCGATCCTCATG+AGG 0.617058 1_3:-58190851 None:intergenic
ATGTGAAGTAGAGTTGGGAA+TGG 0.617643 1_3:+58189149 Msa0128460:five_prime_UTR
AATCGACACGTGGCATGCCA+GGG 0.619056 1_3:-58190643 None:intergenic
TGTGTTGGAGGCAGAAGCTG+CGG 0.620092 1_3:-58188542 None:intergenic
TTGAGTACGTCTGCAAGCCG+GGG 0.621599 1_3:+58190723 Msa0128460:five_prime_UTR
TTTCAATTCAAGTCTTCTCG+AGG 0.622010 1_3:+58182657 Msa0128460:five_prime_UTR
GTACAGTACGTGTCTCTCAA+GGG 0.622673 1_3:-58190750 None:intergenic
GGTGGCTCATCAACCACAGA+TGG 0.622968 1_3:-58188448 None:intergenic
GGTGATGAAAGTGGTTCCGT+TGG 0.623291 1_3:+58190938 Msa0128460:five_prime_UTR
GGTGTGTGTTGCTGCGAGAG+AGG 0.626024 1_3:+58183092 Msa0128460:five_prime_UTR
TCATCATTGCAACCCTCATG+AGG 0.626300 1_3:-58191333 None:intergenic
AGACCAAATGATGAAGAGCA+TGG 0.627980 1_3:+58189585 Msa0128460:five_prime_UTR
TGGTTCCATTGGCTGTGGAG+TGG 0.628638 1_3:+58191425 Msa0128460:CDS
GCATAATATTAGCAACCTGA+AGG 0.628689 1_3:+58187838 Msa0128460:five_prime_UTR
AAGTAGTCCGCTACAACACA+AGG 0.628899 1_3:-58190698 None:intergenic
TCAAGAAAGCGAGTATAAGG+AGG 0.629991 1_3:-58190593 None:intergenic
TCCAAATGAGACAAGAGATG+AGG 0.630653 1_3:+58189449 Msa0128460:five_prime_UTR
TTGCCGCTACTGCATCAGGA+AGG 0.631958 1_3:+58189895 Msa0128460:five_prime_UTR
ATCGGAAAAGGCAGTATTTG+GGG 0.632673 1_3:+58189419 Msa0128460:five_prime_UTR
TTGTTAACATCAAGGATTTG+GGG 0.635516 1_3:-58189033 None:intergenic
GCACATTCAGATGAAAAGCT+CGG 0.636983 1_3:+58188097 Msa0128460:five_prime_UTR
ATCGTCAAAATCTCTAAGAG+AGG 0.640134 1_3:+58187697 Msa0128460:five_prime_UTR
GGAAGAGGCTAAGGATTCTG+AGG 0.640663 1_3:+58187580 Msa0128460:five_prime_UTR
GGCAGAAGAGATTATCGAGG+AGG 0.641305 1_3:+58191305 Msa0128460:CDS
TCCTCGGGAATAGCTGTCAG+CGG 0.641403 1_3:-58191474 None:intergenic
TTTGCCGTGATTCTCATCAG+TGG 0.642588 1_3:+58189814 Msa0128460:five_prime_UTR
CTTGCCAAGTATGTGGATCG+CGG 0.642622 1_3:+58191364 Msa0128460:CDS
GGCAGGAAAATTATTGCCAG+AGG 0.644253 1_3:+58190064 Msa0128460:five_prime_UTR
ATGAGACAAGAGATGAGGCA+GGG 0.645233 1_3:+58189454 Msa0128460:five_prime_UTR
TCGTCGCGATCCTCATGAGG+AGG 0.645323 1_3:-58190848 None:intergenic
GAAAGAAAGCCATCAGACAC+AGG 0.645551 1_3:-58188469 None:intergenic
ATGGCGGTGGAGTTGATGTG+GGG 0.646548 1_3:+58182927 Msa0128460:five_prime_UTR
ACAGGATACTCTTAAGCGTG+CGG 0.647401 1_3:+58190535 Msa0128460:intron
ATTCCATCCAAATCTTTAAG+CGG 0.647811 1_3:-58185545 None:intergenic
GAGAGAGGATGGAAAGATGT+TGG 0.648494 1_3:+58183107 Msa0128460:five_prime_UTR
GGAGGTTATTCCTCCTCATG+AGG 0.650168 1_3:+58190838 Msa0128460:five_prime_UTR
TGAGATACCTTGTGTTGTAG+CGG 0.650742 1_3:+58190691 Msa0128460:five_prime_UTR
ATACAAATTCATCTGGTCTG+CGG 0.652892 1_3:+58187996 Msa0128460:five_prime_UTR
TAAGGATTCTGAGGATGAGG+CGG 0.653839 1_3:+58187589 Msa0128460:five_prime_UTR
TCTCTCGCAGCAACACACAC+CGG 0.655994 1_3:-58183090 None:intergenic
TCCGCTGACAGCTATTCCCG+AGG 0.660558 1_3:+58191473 Msa0128460:CDS
AGTGAAACACACAATGAGCA+GGG 0.660584 1_3:-58191177 None:intergenic
GATCAATGTGAAGACAGAGA+AGG 0.661317 1_3:+58188175 Msa0128460:five_prime_UTR
TCGGGAATAGCTGTCAGCGG+AGG 0.663496 1_3:-58191471 None:intergenic
ATGACCACTGATGAGAATCA+CGG 0.663566 1_3:-58189818 None:intergenic
GAGGAGGTCATTCCTCATGA+GGG 0.666729 1_3:+58191321 Msa0128460:CDS
TAAGGCAGAAGAGATTATCG+AGG 0.671246 1_3:+58191302 Msa0128460:CDS
AGGCGGAAGATTCCAAGCTG+GGG 0.675147 1_3:+58187606 Msa0128460:five_prime_UTR
AGGATCGAAAGTGCCATCTG+TGG 0.676967 1_3:+58188435 Msa0128460:five_prime_UTR
GGACGGTGCCATCAATATGG+AGG 0.679086 1_3:+58190121 Msa0128460:five_prime_UTR
TGGAGGCTCCAAGAAAGTGG+CGG 0.683408 1_3:+58190138 Msa0128460:five_prime_UTR
TGCCAGAGGAGCCTTATGAG+TGG 0.683644 1_3:+58190078 Msa0128460:five_prime_UTR
TAGCTCCAGATCCTATAAGG+AGG 0.687705 1_3:+58189859 Msa0128460:five_prime_UTR
CATACCAATCTTCCAGCCAA+CGG 0.689524 1_3:-58186701 None:intergenic
TCTTGAAACCCCTTCCACCA+AGG 0.691814 1_3:+58188204 Msa0128460:five_prime_UTR
AGAAAGCCATCAGACACAGG+TGG 0.698252 1_3:-58188466 None:intergenic
GCTGACAGCTATTCCCGAGG+AGG 0.706393 1_3:+58191476 Msa0128460:CDS
TGGACCCACAAATCGACACG+TGG 0.713655 1_3:-58190653 None:intergenic
TGATGAACACTCAAGATGTG+TGG 0.746588 1_3:-58188743 None:intergenic
TGTCTCTCAAGGGAGAACCC+CGG 0.757252 1_3:-58190740 None:intergenic
GAGTATGCAGAAGATGCTGG+TGG 0.768912 1_3:+58189081 Msa0128460:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTCATTATAGATTATTAA+CGG + chr1_3:58185888-58185907 Msa0128460:intron 10.0%
!!! AATTATTTTCATTTACTAAT+GGG - chr1_3:58185971-58185990 None:intergenic 10.0%
!!! TAATTATTTTCATTTACTAA+TGG - chr1_3:58185972-58185991 None:intergenic 10.0%
!! ATTTCAAAAAACAATTTAAA+AGG - chr1_3:58186618-58186637 None:intergenic 10.0%
!!! TTAAATTGTTTTTTGAAATT+TGG + chr1_3:58186619-58186638 Msa0128460:intron 10.0%
!!! ATTTTTTTAAATTTTCGATC+TGG + chr1_3:58182834-58182853 Msa0128460:intron 15.0%
!! ATTCAAAAGAAAAAGAAATA+GGG - chr1_3:58183013-58183032 None:intergenic 15.0%
!! AATTCAAAAGAAAAAGAAAT+AGG - chr1_3:58183014-58183033 None:intergenic 15.0%
!!! TAAAATTTTGAAATGGAAAA+TGG + chr1_3:58183339-58183358 Msa0128460:intron 15.0%
!! CATTCAATCAATAATTAAAA+GGG - chr1_3:58183544-58183563 None:intergenic 15.0%
!!! TCATTTAAAATTAAATGTGA+AGG - chr1_3:58184328-58184347 None:intergenic 15.0%
!!! ATTTTTTTGTTTTTAAACCT+TGG - chr1_3:58184422-58184441 None:intergenic 15.0%
!!! AATATAATACTTTGTTTGAT+AGG + chr1_3:58184865-58184884 Msa0128460:intron 15.0%
!!! ATATAATACTTTGTTTGATA+GGG + chr1_3:58184866-58184885 Msa0128460:intron 15.0%
!! TAATAATCTATAATGAAAAG+CGG - chr1_3:58185887-58185906 None:intergenic 15.0%
!!! TAAGTGATAATTTTGTAATT+TGG - chr1_3:58186401-58186420 None:intergenic 15.0%
!! GTGAAATTCTATTTATAATA+TGG - chr1_3:58186918-58186937 None:intergenic 15.0%
!! ATACAAAATAAATTTCAAAG+GGG - chr1_3:58190379-58190398 None:intergenic 15.0%
!! CATACAAAATAAATTTCAAA+GGG - chr1_3:58190380-58190399 None:intergenic 15.0%
!! ACATACAAAATAAATTTCAA+AGG - chr1_3:58190381-58190400 None:intergenic 15.0%
!! AAAAGTCAATAAAAGTAAAA+AGG + chr1_3:58191542-58191561 Msa0128460:CDS 15.0%
!! AAAGTCAATAAAAGTAAAAA+GGG + chr1_3:58191543-58191562 Msa0128460:CDS 15.0%
!! AAATTCAAACAAAACATCAA+CGG - chr1_3:58183215-58183234 None:intergenic 20.0%
!!! GTTTGAATTTGAATTCATTT+TGG + chr1_3:58183225-58183244 Msa0128460:intron 20.0%
!! CTCATTAATACAAATGAAAA+TGG - chr1_3:58183409-58183428 None:intergenic 20.0%
!! CCATTCAATCAATAATTAAA+AGG - chr1_3:58183545-58183564 None:intergenic 20.0%
!!! CCTTTTAATTATTGATTGAA+TGG + chr1_3:58183542-58183561 Msa0128460:intron 20.0%
!! GTTCTATTTATAAGCTAATA+AGG + chr1_3:58183697-58183716 Msa0128460:intron 20.0%
!!! TTTTAAAATAACATAGCATG+AGG + chr1_3:58184052-58184071 Msa0128460:intron 20.0%
!! AAAATTAAATGTGAAGGAAA+AGG - chr1_3:58184322-58184341 None:intergenic 20.0%
!!! ATTTTTTTCTTGAGAAAATG+AGG - chr1_3:58184355-58184374 None:intergenic 20.0%
!!! TCATTTTCTCAAGAAAAAAA+TGG + chr1_3:58184354-58184373 Msa0128460:intron 20.0%
!! AAAAATAAATTGGTACATCA+TGG + chr1_3:58184436-58184455 Msa0128460:intron 20.0%
!! AAAATAAATTGGTACATCAT+GGG + chr1_3:58184437-58184456 Msa0128460:intron 20.0%
!!! TATAATACTTTGTTTGATAG+GGG + chr1_3:58184867-58184886 Msa0128460:intron 20.0%
!!! ATCTATCACATTTTTTGAAA+GGG - chr1_3:58185076-58185095 None:intergenic 20.0%
!!! AATCTATCACATTTTTTGAA+AGG - chr1_3:58185077-58185096 None:intergenic 20.0%
!!! AGTGAATTTTGTCAATATAT+CGG - chr1_3:58186056-58186075 None:intergenic 20.0%
!! ACAAAATTCACTAAACTATA+GGG + chr1_3:58186064-58186083 Msa0128460:intron 20.0%
!!! TTTTCATCCTTATAAATAAG+AGG - chr1_3:58186321-58186340 None:intergenic 20.0%
!! TATTCTTACACATCAATAAT+GGG - chr1_3:58186580-58186599 None:intergenic 20.0%
!! ATATTCTTACACATCAATAA+TGG - chr1_3:58186581-58186600 None:intergenic 20.0%
!!! TTTTTTGAAATTTGGTTTAC+AGG + chr1_3:58186627-58186646 Msa0128460:intron 20.0%
!!! TTTTTGAAATTTGGTTTACA+GGG + chr1_3:58186628-58186647 Msa0128460:intron 20.0%
!! TTTAAATACATGAGATTTCA+TGG - chr1_3:58186766-58186785 None:intergenic 20.0%
!! AATCTCATGTATTTAAATTG+TGG + chr1_3:58186769-58186788 Msa0128460:intron 20.0%
!!! GTTTTTATGATAGAACATTA+TGG + chr1_3:58186953-58186972 Msa0128460:intron 20.0%
!! TGATTATTAATAAACGTTAC+CGG - chr1_3:58187047-58187066 None:intergenic 20.0%
!! GTAACGTTTATTAATAATCA+TGG + chr1_3:58187047-58187066 Msa0128460:intron 20.0%
!! AAATAACTTAAATACTTGCT+TGG + chr1_3:58188510-58188529 Msa0128460:five_prime_UTR 20.0%
!! ATAAATTGTCTAACTAATCT+CGG + chr1_3:58189991-58190010 Msa0128460:intron 20.0%
!! TACAAAATAAATTTCAAAGG+GGG - chr1_3:58190378-58190397 None:intergenic 20.0%
!! TAAATCTTGATTTACACATT+TGG + chr1_3:58191237-58191256 Msa0128460:five_prime_UTR 20.0%
!! AAATCTTGATTTACACATTT+GGG + chr1_3:58191238-58191257 Msa0128460:five_prime_UTR 20.0%
!! TTTTAAATTTTCGATCTGGA+AGG + chr1_3:58182838-58182857 Msa0128460:intron 25.0%
!!! CAGCAAGTAAAATTTTGAAA+TGG + chr1_3:58183332-58183351 Msa0128460:intron 25.0%
!!! TTAAAACGTTTTGAAATGGA+GGG - chr1_3:58183454-58183473 None:intergenic 25.0%
!!! AACCTTAAAACGTTTTGAAA+TGG - chr1_3:58183458-58183477 None:intergenic 25.0%
!! TATTGATTGAATGGTACAAT+TGG + chr1_3:58183551-58183570 Msa0128460:intron 25.0%
!!! AAATGACACTCATTTTGAAA+CGG + chr1_3:58183607-58183626 Msa0128460:intron 25.0%
!!! GAAATGTTGGACTTTAAAAT+GGG + chr1_3:58183784-58183803 Msa0128460:intron 25.0%
! TCTAGTACAAAATACAAAGT+CGG - chr1_3:58183866-58183885 None:intergenic 25.0%
! ATTCACATATTTCAAAACGT+AGG + chr1_3:58183885-58183904 Msa0128460:intron 25.0%
! TTTCTCAAAAAACAAAGGTA+CGG + chr1_3:58184007-58184026 Msa0128460:intron 25.0%
! CTATTGCAATATATCATACA+AGG - chr1_3:58184275-58184294 None:intergenic 25.0%
!!! TTTGTTTTTAAACCTTGGTA+CGG - chr1_3:58184417-58184436 None:intergenic 25.0%
!! ATGAAATTTTGGATGCTATA+AGG - chr1_3:58184561-58184580 None:intergenic 25.0%
!! TGGCATTTCATATGAAATTT+TGG - chr1_3:58184572-58184591 None:intergenic 25.0%
! CATACTTATTATCCACTTAT+TGG - chr1_3:58184592-58184611 None:intergenic 25.0%
! AGATCAGAAATGAATGTATT+TGG + chr1_3:58184664-58184683 Msa0128460:intron 25.0%
! GAATGTATTTGGTAAATAGT+TGG + chr1_3:58184675-58184694 Msa0128460:intron 25.0%
! AATACAAAACCCACATTATT+TGG + chr1_3:58184920-58184939 Msa0128460:intron 25.0%
! ATACAAAACCCACATTATTT+GGG + chr1_3:58184921-58184940 Msa0128460:intron 25.0%
! GAACTCAAAAATTGTATTAG+AGG + chr1_3:58184945-58184964 Msa0128460:intron 25.0%
!!! AAATTCATTTAGGCTTTGTT+TGG - chr1_3:58185153-58185172 None:intergenic 25.0%
! CAAAGCCTAAATGAATTTAT+TGG + chr1_3:58185155-58185174 Msa0128460:intron 25.0%
! CACACTTAAAAATGAACTTA+TGG + chr1_3:58185327-58185346 Msa0128460:intron 25.0%
! CTAATATGCTACAAATTTGA+AGG + chr1_3:58185796-58185815 Msa0128460:five_prime_UTR 25.0%
! TTCATTATTCAGAGATGAAA+TGG - chr1_3:58185924-58185943 None:intergenic 25.0%
! TATAAATCTGACAAAACGTT+GGG - chr1_3:58186018-58186037 None:intergenic 25.0%
! ATATAAATCTGACAAAACGT+TGG - chr1_3:58186019-58186038 None:intergenic 25.0%
! GACAAAATTCACTAAACTAT+AGG + chr1_3:58186063-58186082 Msa0128460:intron 25.0%
! AAAAATTTCGTGACTATGTT+AGG + chr1_3:58186138-58186157 Msa0128460:intron 25.0%
! TGTTAACAATAAAACTTCAG+TGG - chr1_3:58186203-58186222 None:intergenic 25.0%
! ACAGAAAAATGAAATACACA+AGG + chr1_3:58186220-58186239 Msa0128460:intron 25.0%
! CAGAAAAATGAAATACACAA+GGG + chr1_3:58186221-58186240 Msa0128460:intron 25.0%
!!! TTTTCCTCCTCTTATTTATA+AGG + chr1_3:58186311-58186330 Msa0128460:intron 25.0%
! CTGTTAATGTAATTCACTTA+GGG - chr1_3:58186372-58186391 None:intergenic 25.0%
! AAGATCTGAAAGGTTTATTT+AGG - chr1_3:58186440-58186459 None:intergenic 25.0%
! GTGTAATTTCAGGAAAAAAA+TGG + chr1_3:58186547-58186566 Msa0128460:intron 25.0%
!!! TTTTGAAATTTGGTTTACAG+GGG + chr1_3:58186629-58186648 Msa0128460:intron 25.0%
! GTAAATGATTATCAGATCTT+AGG - chr1_3:58187463-58187482 None:intergenic 25.0%
! ATTAGTTGAAATGGATAACA+TGG - chr1_3:58187508-58187527 None:intergenic 25.0%
! AGTTGAGTAATTAGTTGAAA+TGG - chr1_3:58187517-58187536 None:intergenic 25.0%
!!! GATCTTTCTTGATTTTAGTT+TGG - chr1_3:58188359-58188378 None:intergenic 25.0%
! TTAATCAAGTCTAAAGATAG+TGG + chr1_3:58188655-58188674 Msa0128460:five_prime_UTR 25.0%
! TTTGTTAACATCAAGGATTT+GGG - chr1_3:58189037-58189056 None:intergenic 25.0%
!! ATTTGTTAACATCAAGGATT+TGG - chr1_3:58189038-58189057 None:intergenic 25.0%
!!! GTTTCATTTGTGACTTTTTT+AGG - chr1_3:58189279-58189298 None:intergenic 25.0%
!!! ATGTTTTACTTTTAACTTCG+AGG - chr1_3:58189337-58189356 None:intergenic 25.0%
!!! AAATTCTCGAGCTTATTTTT+TGG - chr1_3:58189543-58189562 None:intergenic 25.0%
!! GAATTTTATTGAAGAGGAAA+AGG + chr1_3:58189557-58189576 Msa0128460:five_prime_UTR 25.0%
! TCCATCTATATCAGAATTTA+AGG + chr1_3:58189695-58189714 Msa0128460:five_prime_UTR 25.0%
! AAAATAAAACATGTGGTTTC+AGG - chr1_3:58189732-58189751 None:intergenic 25.0%
!!! ACCACATGTTTTATTTTAAG+TGG + chr1_3:58189735-58189754 Msa0128460:five_prime_UTR 25.0%
! GAACACATTATACAGAATTA+CGG - chr1_3:58189953-58189972 None:intergenic 25.0%
! TAAATTGTCTAACTAATCTC+GGG + chr1_3:58189992-58190011 Msa0128460:intron 25.0%
! ATTGAAGAAAAACATACCAA+AGG - chr1_3:58190239-58190258 None:intergenic 25.0%
!! TTTGGTATGTTTTTCTTCAA+TGG + chr1_3:58190238-58190257 Msa0128460:intron 25.0%
! AAATGTTTGTAGTTAGTAGT+TGG + chr1_3:58190262-58190281 Msa0128460:intron 25.0%
! ATTTGCAAAACTTCAAAGTA+AGG + chr1_3:58190799-58190818 Msa0128460:five_prime_UTR 25.0%
! AAAACCCAATAAAAGGAAAA+AGG + chr1_3:58191072-58191091 Msa0128460:five_prime_UTR 25.0%
! AAACCCAATAAAAGGAAAAA+GGG + chr1_3:58191073-58191092 Msa0128460:five_prime_UTR 25.0%
! AATGACCTAAAATCCATTAA+GGG - chr1_3:58191267-58191286 None:intergenic 25.0%
! AAATGACCTAAAATCCATTA+AGG - chr1_3:58191268-58191287 None:intergenic 25.0%
! ATTTACCAAACATCAAAGTA+AGG + chr1_3:58191284-58191303 Msa0128460:CDS 25.0%
!! TTTGGATTCTAATGCATTTT+GGG - chr1_3:58191512-58191531 None:intergenic 25.0%
!! TTTTGGATTCTAATGCATTT+TGG - chr1_3:58191513-58191532 None:intergenic 25.0%
!!! TGACTTTTTTTGAGCATTTT+TGG - chr1_3:58191530-58191549 None:intergenic 25.0%
GAAAAATGAAAACGAGTTTG+TGG - chr1_3:58182700-58182719 None:intergenic 30.0%
!! ATTCGATTCAAGCTTGTTAA+TGG + chr1_3:58182908-58182927 Msa0128460:five_prime_UTR 30.0%
! GAATTTTGTGTTCTTATCAC+AGG + chr1_3:58183062-58183081 Msa0128460:intron 30.0%
!! AAACATGGCTTTATAATGCA+TGG + chr1_3:58183373-58183392 Msa0128460:intron 30.0%
ATACAAATGAAAATGGCAAC+AGG - chr1_3:58183402-58183421 None:intergenic 30.0%
!!! CTTAAAACGTTTTGAAATGG+AGG - chr1_3:58183455-58183474 None:intergenic 30.0%
! CTCCATTTCAAAACGTTTTA+AGG + chr1_3:58183453-58183472 Msa0128460:intron 30.0%
TAAGCTAATAAGGAGATTGA+TGG + chr1_3:58183707-58183726 Msa0128460:intron 30.0%
AAGCTAATAAGGAGATTGAT+GGG + chr1_3:58183708-58183727 Msa0128460:intron 30.0%
TTTCAGTTGAGAGTAACTAT+AGG + chr1_3:58183746-58183765 Msa0128460:intron 30.0%
TACTCATTTGTAGGAAATGT+TGG + chr1_3:58183771-58183790 Msa0128460:intron 30.0%
! GGAAATGTTGGACTTTAAAA+TGG + chr1_3:58183783-58183802 Msa0128460:intron 30.0%
CCAATCATCCAATCAAATTT+GGG - chr1_3:58183914-58183933 None:intergenic 30.0%
ACCAATCATCCAATCAAATT+TGG - chr1_3:58183915-58183934 None:intergenic 30.0%
! TTCTCAAAAAACAAAGGTAC+GGG + chr1_3:58184008-58184027 Msa0128460:intron 30.0%
AGGAAATTATATTGCTCAAC+CGG + chr1_3:58184072-58184091 Msa0128460:intron 30.0%
!! AGATATTCATTCGTCACTTT+TGG + chr1_3:58184189-58184208 Msa0128460:intron 30.0%
! ACTATCCCTTTTTCTTTTCT+CGG + chr1_3:58184219-58184238 Msa0128460:intron 30.0%
TCATATGAAATGCCAATAAG+TGG + chr1_3:58184577-58184596 Msa0128460:intron 30.0%
TTAGAACTTCTGTTCTCATT+AGG - chr1_3:58184721-58184740 None:intergenic 30.0%
!! ACAGAAGTTCTAAGTAAAAG+AGG + chr1_3:58184728-58184747 Msa0128460:intron 30.0%
AAAACAGTAGAAAACCTATG+TGG + chr1_3:58184756-58184775 Msa0128460:intron 30.0%
!!! ACTCTAAGGCTTTGTTATTT+TGG + chr1_3:58184791-58184810 Msa0128460:intron 30.0%
!!! TAAGGCTTTGTTATTTTGGA+GGG + chr1_3:58184795-58184814 Msa0128460:intron 30.0%
TACAAAACCCACATTATTTG+GGG + chr1_3:58184922-58184941 Msa0128460:intron 30.0%
CTCAAAAATTGTATTAGAGG+AGG + chr1_3:58184948-58184967 Msa0128460:intron 30.0%
AGCCTAAATGAATTTATTGG+AGG + chr1_3:58185158-58185177 Msa0128460:intron 30.0%
AGCCTCCAATAAATTCATTT+AGG - chr1_3:58185163-58185182 None:intergenic 30.0%
AGTTTGAGAATGACATTGTT+TGG + chr1_3:58185184-58185203 Msa0128460:intron 30.0%
ATTCCATCCAAATCTTTAAG+CGG - chr1_3:58185548-58185567 None:intergenic 30.0%
TAAAGATTTGGATGGAATTC+CGG + chr1_3:58185550-58185569 Msa0128460:five_prime_UTR 30.0%
TAACAAAGCATATAAGCTTC+TGG - chr1_3:58185674-58185693 None:intergenic 30.0%
AAATATGGTGAGATCAAGTA+CGG - chr1_3:58185702-58185721 None:intergenic 30.0%
! GTTCGTTTCATCTTTGTTAT+TGG + chr1_3:58185818-58185837 Msa0128460:intron 30.0%
TTATTCAGAGATGAAATGGA+TGG - chr1_3:58185920-58185939 None:intergenic 30.0%
GGGACTACTTATAAAACATA+AGG - chr1_3:58185998-58186017 None:intergenic 30.0%
TCATCCTTATAAATAAGAGG+AGG - chr1_3:58186318-58186337 None:intergenic 30.0%
GCTGTTAATGTAATTCACTT+AGG - chr1_3:58186373-58186392 None:intergenic 30.0%
TGAAAGGTTTATTTAGGAAG+GGG - chr1_3:58186434-58186453 None:intergenic 30.0%
CTGAAAGGTTTATTTAGGAA+GGG - chr1_3:58186435-58186454 None:intergenic 30.0%
TCTGAAAGGTTTATTTAGGA+AGG - chr1_3:58186436-58186455 None:intergenic 30.0%
AAAGTGATAAGTAGTCTGTT+AGG - chr1_3:58186499-58186518 None:intergenic 30.0%
! ATTAAGAGAGGTGTAATTTC+AGG + chr1_3:58186537-58186556 Msa0128460:intron 30.0%
!! GTGATTAACTAGCTTTATTG+TGG - chr1_3:58186682-58186701 None:intergenic 30.0%
TCCTTGTCAAACAAGAATAA+AGG - chr1_3:58186731-58186750 None:intergenic 30.0%
TGTTAATTTCTTCAGCTTGA+AGG + chr1_3:58186842-58186861 Msa0128460:intron 30.0%
! CTCTTGTTATATTTGTCTTC+AGG - chr1_3:58186882-58186901 None:intergenic 30.0%
CTGAAGACAAATATAACAAG+AGG + chr1_3:58186880-58186899 Msa0128460:five_prime_UTR 30.0%
TAGAACATTATGGCGTAATT+TGG + chr1_3:58186963-58186982 Msa0128460:intron 30.0%
! GATATGTTAGCTTAAATGAG+TGG + chr1_3:58187128-58187147 Msa0128460:intron 30.0%
TTTGTTGCTGAGAAAAAAGA+CGG + chr1_3:58187293-58187312 Msa0128460:intron 30.0%
!!! CTGATTGATTTTAAAGCATC+TGG + chr1_3:58187343-58187362 Msa0128460:intron 30.0%
TCTAATTCATTCTCAAACAG+TGG + chr1_3:58187536-58187555 Msa0128460:intron 30.0%
!!! TGGTTTTGAACTAGAAATGA+TGG + chr1_3:58187556-58187575 Msa0128460:five_prime_UTR 30.0%
! TTTTGAACTAGAAATGATGG+CGG + chr1_3:58187559-58187578 Msa0128460:five_prime_UTR 30.0%
! AGTTTTTCCAAATGCCAATA+AGG + chr1_3:58187757-58187776 Msa0128460:five_prime_UTR 30.0%
! GTTTTTCCAAATGCCAATAA+GGG + chr1_3:58187758-58187777 Msa0128460:five_prime_UTR 30.0%
!!! TAAGAATGCTGATTTTCCAA+AGG + chr1_3:58187940-58187959 Msa0128460:intron 30.0%
ACTGGAAATACAAATTCATC+TGG + chr1_3:58187989-58188008 Msa0128460:five_prime_UTR 30.0%
TCTTGTGTAACTTAACTTCT+TGG - chr1_3:58188050-58188069 None:intergenic 30.0%
! TATTCTAGGAAGAACCAAAA+AGG + chr1_3:58188130-58188149 Msa0128460:five_prime_UTR 30.0%
! ATTCTAGGAAGAACCAAAAA+GGG + chr1_3:58188131-58188150 Msa0128460:five_prime_UTR 30.0%
! AGATTTACCATTTGTTAGTG+GGG - chr1_3:58188413-58188432 None:intergenic 30.0%
! GAGATTTACCATTTGTTAGT+GGG - chr1_3:58188414-58188433 None:intergenic 30.0%
! TGAGATTTACCATTTGTTAG+TGG - chr1_3:58188415-58188434 None:intergenic 30.0%
CTAACAAATGGTAAATCTCA+AGG + chr1_3:58188415-58188434 Msa0128460:five_prime_UTR 30.0%
TTTCTTTCTGTTGACAAAGA+TGG + chr1_3:58188484-58188503 Msa0128460:five_prime_UTR 30.0%
TCATTCTTTGAATTCTTTCC+TGG - chr1_3:58188769-58188788 None:intergenic 30.0%
GGAAAGAATTCAAAGAATGA+AGG + chr1_3:58188769-58188788 Msa0128460:five_prime_UTR 30.0%
!! ATTTCCTGGTCTTGATAATT+GGG + chr1_3:58188792-58188811 Msa0128460:five_prime_UTR 30.0%
TTGTTAACATCAAGGATTTG+GGG - chr1_3:58189036-58189055 None:intergenic 30.0%
!! CCATCAATTTGTTAACATCA+AGG - chr1_3:58189044-58189063 None:intergenic 30.0%
CCTTGATGTTAACAAATTGA+TGG + chr1_3:58189041-58189060 Msa0128460:five_prime_UTR 30.0%
TTCAAATAAAGTAGACACCT+CGG + chr1_3:58189197-58189216 Msa0128460:five_prime_UTR 30.0%
!!! CTTCTTCACATTTTTTATCC+TGG - chr1_3:58189248-58189267 None:intergenic 30.0%
!!! TCATTTGTGACTTTTTTAGG+AGG - chr1_3:58189276-58189295 None:intergenic 30.0%
GCCTTAAATTCTGATATAGA+TGG - chr1_3:58189699-58189718 None:intergenic 30.0%
GCCACTTAAAATAAAACATG+TGG - chr1_3:58189739-58189758 None:intergenic 30.0%
AATAAATTTCAAAGGGGGTT+GGG - chr1_3:58190373-58190392 None:intergenic 30.0%
AAATAAATTTCAAAGGGGGT+TGG - chr1_3:58190374-58190393 None:intergenic 30.0%
! ATTTTCTTTTCGCCTTCATA+TGG + chr1_3:58190401-58190420 Msa0128460:intron 30.0%
! TTTTCTTTTCGCCTTCATAT+GGG + chr1_3:58190402-58190421 Msa0128460:intron 30.0%
ATCCAACTTAATTGTTTCAC+AGG + chr1_3:58190517-58190536 Msa0128460:intron 30.0%
ATCCTGTGAAACAATTAAGT+TGG - chr1_3:58190522-58190541 None:intergenic 30.0%
!!! TCTCATGTTTTAAGAACTCT+TGG - chr1_3:58190676-58190695 None:intergenic 30.0%
GCTCAAAAAAACCCAATAAA+AGG + chr1_3:58191065-58191084 Msa0128460:five_prime_UTR 30.0%
ACATGTTGACAGATTCAAAA+GGG - chr1_3:58191133-58191152 None:intergenic 30.0%
TACATGTTGACAGATTCAAA+AGG - chr1_3:58191134-58191153 None:intergenic 30.0%
CGAGAAGACTTGAATTGAAA+TGG - chr1_3:58182657-58182676 None:intergenic 35.0%
TTTCAATTCAAGTCTTCTCG+AGG + chr1_3:58182657-58182676 Msa0128460:five_prime_UTR 35.0%
AAGAAAGAAGAAACAAACCG+AGG - chr1_3:58183187-58183206 None:intergenic 35.0%
CTATAGGACTACTCATTTGT+AGG + chr1_3:58183762-58183781 Msa0128460:intron 35.0%
CAGTCACATAATTAGCCAAT+TGG + chr1_3:58183834-58183853 Msa0128460:intron 35.0%
ATCATCCAATCAAATTTGGG+AGG - chr1_3:58183911-58183930 None:intergenic 35.0%
CCCAAATTTGATTGGATGAT+TGG + chr1_3:58183911-58183930 Msa0128460:intron 35.0%
CGGCATTTCTCAAAAAACAA+AGG + chr1_3:58184002-58184021 Msa0128460:intron 35.0%
AAATTATATTGCTCAACCGG+CGG + chr1_3:58184075-58184094 Msa0128460:intron 35.0%
TTGCTCCGAGAAAAGAAAAA+GGG - chr1_3:58184227-58184246 None:intergenic 35.0%
TTTGCTCCGAGAAAAGAAAA+AGG - chr1_3:58184228-58184247 None:intergenic 35.0%
GAAAAGGAAATAATGCAACC+TGG - chr1_3:58184306-58184325 None:intergenic 35.0%
TTTAAACCTTGGTACGGTTA+CGG - chr1_3:58184411-58184430 None:intergenic 35.0%
! TAGCTGATTTATCCAACTCA+AGG - chr1_3:58184633-58184652 None:intergenic 35.0%
! GTGAAGAATTTTCTCCACAT+AGG - chr1_3:58184773-58184792 None:intergenic 35.0%
GGAGAAAATTCTTCACTCTA+AGG + chr1_3:58184777-58184796 Msa0128460:intron 35.0%
!!! CTAAGGCTTTGTTATTTTGG+AGG + chr1_3:58184794-58184813 Msa0128460:intron 35.0%
!!! AAGGCTTTGTTATTTTGGAG+GGG + chr1_3:58184796-58184815 Msa0128460:intron 35.0%
!!! TTTGTTATTTTGGAGGGGAA+TGG + chr1_3:58184801-58184820 Msa0128460:intron 35.0%
!!! AGGGTTTTGGAAAAAAAGGA+AGG + chr1_3:58184829-58184848 Msa0128460:intron 35.0%
GAAAAAAAGGAAGGAACAAG+AGG + chr1_3:58184838-58184857 Msa0128460:intron 35.0%
ACAAAACCCACATTATTTGG+GGG + chr1_3:58184923-58184942 Msa0128460:intron 35.0%
ATTGTATTAGAGGAGGACTT+TGG + chr1_3:58184955-58184974 Msa0128460:intron 35.0%
CTTGGAAATATAGGGGAAAA+TGG - chr1_3:58185103-58185122 None:intergenic 35.0%
!! TTAGGCTTTGTTTGGAAGTT+TGG - chr1_3:58185145-58185164 None:intergenic 35.0%
CTTATGCTAACTCACTTAGA+TGG + chr1_3:58185209-58185228 Msa0128460:intron 35.0%
AACTTATGGATCAAAACACG+AGG + chr1_3:58185341-58185360 Msa0128460:intron 35.0%
! AATCGTGTTTTCCATTTACC+AGG + chr1_3:58185511-58185530 Msa0128460:intron 35.0%
AAAGATTTGGATGGAATTCC+GGG + chr1_3:58185551-58185570 Msa0128460:five_prime_UTR 35.0%
TTGTCTGAAGAGGGAAAATA+TGG - chr1_3:58185717-58185736 None:intergenic 35.0%
! TATTTTCCCTCTTCAGACAA+TGG + chr1_3:58185717-58185736 Msa0128460:intron 35.0%
ATTTACTAATGGGACGAAGT+AGG - chr1_3:58185961-58185980 None:intergenic 35.0%
ACAAAACGTGAGGGATTATT+AGG + chr1_3:58186105-58186124 Msa0128460:intron 35.0%
TGTAATTCACTTAGGGTAGT+TGG - chr1_3:58186365-58186384 None:intergenic 35.0%
ACCTTTCAGATCTTCTTTGA+AGG + chr1_3:58186446-58186465 Msa0128460:intron 35.0%
CCTTTCAGATCTTCTTTGAA+GGG + chr1_3:58186447-58186466 Msa0128460:intron 35.0%
CTTGAGAGACAAATTAAGAG+AGG + chr1_3:58186525-58186544 Msa0128460:intron 35.0%
TAAAGCTAGTTAATCACCGT+TGG + chr1_3:58186685-58186704 Msa0128460:five_prime_UTR 35.0%
! GCCTTTATTCTTGTTTGACA+AGG + chr1_3:58186727-58186746 Msa0128460:intron 35.0%
! TCTTGTTTGACAAGGAGTTA+TGG + chr1_3:58186735-58186754 Msa0128460:intron 35.0%
CTTGTTTGACAAGGAGTTAT+GGG + chr1_3:58186736-58186755 Msa0128460:intron 35.0%
TGTATTTAAATTGTGGCTGC+TGG + chr1_3:58186776-58186795 Msa0128460:intron 35.0%
ATTTCTTCAGCTTGAAGGAT+TGG + chr1_3:58186847-58186866 Msa0128460:intron 35.0%
TTTCTTCAGCTTGAAGGATT+GGG + chr1_3:58186848-58186867 Msa0128460:intron 35.0%
!! TGTTTTTATCACGTTGTAGC+AGG + chr1_3:58187000-58187019 Msa0128460:intron 35.0%
TTGCAATTGTTGCATTTCAC+CGG + chr1_3:58187025-58187044 Msa0128460:intron 35.0%
AAAAACACGAAACAGATCGT+CGG - chr1_3:58187092-58187111 None:intergenic 35.0%
TATCCTCTCTCGTAATCTTA+AGG + chr1_3:58187227-58187246 Msa0128460:intron 35.0%
AATCCTTAAGATTACGAGAG+AGG - chr1_3:58187233-58187252 None:intergenic 35.0%
TTAAGGATTCCAACTTTCCA+AGG + chr1_3:58187244-58187263 Msa0128460:intron 35.0%
CAAATGAATTGAGAACACCT+TGG - chr1_3:58187264-58187283 None:intergenic 35.0%
TTGTTGCTGAGAAAAAAGAC+GGG + chr1_3:58187294-58187313 Msa0128460:intron 35.0%
! TGTGCCAAATTTTGAACCTA+GGG - chr1_3:58187663-58187682 None:intergenic 35.0%
! ATCGTCAAAATCTCTAAGAG+AGG + chr1_3:58187697-58187716 Msa0128460:five_prime_UTR 35.0%
TTGGCATTTGGAAAAACTTG+TGG - chr1_3:58187755-58187774 None:intergenic 35.0%
TCTTTACCCTTATTGGCATT+TGG - chr1_3:58187767-58187786 None:intergenic 35.0%
AAAGACTCTTCGATTACTAC+AGG + chr1_3:58187782-58187801 Msa0128460:five_prime_UTR 35.0%
GCATAATATTAGCAACCTGA+AGG + chr1_3:58187838-58187857 Msa0128460:five_prime_UTR 35.0%
AGCTACCTGAATCATATGTT+AGG + chr1_3:58187906-58187925 Msa0128460:intron 35.0%
ATGGTCCTAACATATGATTC+AGG - chr1_3:58187914-58187933 None:intergenic 35.0%
ATCAGCATTCTTAGACTCAA+TGG - chr1_3:58187933-58187952 None:intergenic 35.0%
TTCCAGGATATTGACATTAC+TGG + chr1_3:58187971-58187990 Msa0128460:intron 35.0%
TTCCAGTAATGTCAATATCC+TGG - chr1_3:58187976-58187995 None:intergenic 35.0%
ATACAAATTCATCTGGTCTG+CGG + chr1_3:58187996-58188015 Msa0128460:five_prime_UTR 35.0%
AAATTGTCATCACGCAGATT+AGG - chr1_3:58188022-58188041 None:intergenic 35.0%
TAATCTGCGTGATGACAATT+TGG + chr1_3:58188021-58188040 Msa0128460:five_prime_UTR 35.0%
! TGGAAAAGGTAAACCCTTTT+TGG - chr1_3:58188147-58188166 None:intergenic 35.0%
! AAAAAGGGTTTACCTTTTCC+AGG + chr1_3:58188146-58188165 Msa0128460:five_prime_UTR 35.0%
! AAAAGGGTTTACCTTTTCCA+GGG + chr1_3:58188147-58188166 Msa0128460:five_prime_UTR 35.0%
ATCAAATCTGCATGTGTTGA+AGG + chr1_3:58188247-58188266 Msa0128460:five_prime_UTR 35.0%
!! AGAAACTGGTGTTATTCAAG+AGG + chr1_3:58188279-58188298 Msa0128460:five_prime_UTR 35.0%
GAAAAAACCCCACTAACAAA+TGG + chr1_3:58188403-58188422 Msa0128460:five_prime_UTR 35.0%
CTTATCAAATGCCAATGTGT+TGG - chr1_3:58188560-58188579 None:intergenic 35.0%
TCAAAGAATGAAGGATTTCC+TGG + chr1_3:58188778-58188797 Msa0128460:five_prime_UTR 35.0%
!! GATTTCCTGGTCTTGATAAT+TGG + chr1_3:58188791-58188810 Msa0128460:five_prime_UTR 35.0%
AAATCCCAATTATCAAGACC+AGG - chr1_3:58188799-58188818 None:intergenic 35.0%
! TTAGCAGTAACACCTTTTCT+GGG - chr1_3:58188901-58188920 None:intergenic 35.0%
! TTTAGCAGTAACACCTTTTC+TGG - chr1_3:58188902-58188921 None:intergenic 35.0%
AGCAAAGAAATAGCAACTTC+TGG + chr1_3:58188988-58189007 Msa0128460:five_prime_UTR 35.0%
CAAATTGATGGAGCAAAAAC+CGG + chr1_3:58189053-58189072 Msa0128460:five_prime_UTR 35.0%
!!! TTTTTTGGATGACGAAACTG+AGG + chr1_3:58189113-58189132 Msa0128460:five_prime_UTR 35.0%
TCTACTTCACATTTGTCATC+TGG - chr1_3:58189141-58189160 None:intergenic 35.0%
TGACAAATGTGAAGTAGAGT+TGG + chr1_3:58189143-58189162 Msa0128460:five_prime_UTR 35.0%
GACAAATGTGAAGTAGAGTT+GGG + chr1_3:58189144-58189163 Msa0128460:five_prime_UTR 35.0%
AGATGAACCAATTCTTCATC+CGG - chr1_3:58189177-58189196 None:intergenic 35.0%
TGCAAAGAAGTTAGCGAAAT+CGG + chr1_3:58189401-58189420 Msa0128460:five_prime_UTR 35.0%
AAATCGGAAAAGGCAGTATT+TGG + chr1_3:58189417-58189436 Msa0128460:five_prime_UTR 35.0%
AATCGGAAAAGGCAGTATTT+GGG + chr1_3:58189418-58189437 Msa0128460:five_prime_UTR 35.0%
GAGTTCTCACTTATATCAGA+AGG - chr1_3:58189513-58189532 None:intergenic 35.0%
! GCTCGAGAATTTTATTGAAG+AGG + chr1_3:58189551-58189570 Msa0128460:five_prime_UTR 35.0%
AAACCATGCTCTTCATCATT+TGG - chr1_3:58189591-58189610 None:intergenic 35.0%
TTAGAGGAGAGAAGAAATGT+TGG + chr1_3:58189609-58189628 Msa0128460:five_prime_UTR 35.0%
TAGAGGAGAGAAGAAATGTT+GGG + chr1_3:58189610-58189629 Msa0128460:five_prime_UTR 35.0%
TCCTTAGACTTGATATTTGC+TGG - chr1_3:58189663-58189682 None:intergenic 35.0%
AATTTCTCTGTCCTCCTTAT+AGG - chr1_3:58189873-58189892 None:intergenic 35.0%
TTGAAAGAAAGAACAGGTCA+TGG + chr1_3:58190164-58190183 Msa0128460:five_prime_UTR 35.0%
GAAGAAAAACATACCAAAGG+TGG - chr1_3:58190236-58190255 None:intergenic 35.0%
! ATCATATTTTCTCCTTCGTC+CGG + chr1_3:58190293-58190312 Msa0128460:intron 35.0%
GTATCAAGAAAGCGAGTATA+AGG - chr1_3:58190599-58190618 None:intergenic 35.0%
TATACTCGCTTTCTTGATAC+TGG + chr1_3:58190599-58190618 Msa0128460:five_prime_UTR 35.0%
ATACTCGCTTTCTTGATACT+GGG + chr1_3:58190600-58190619 Msa0128460:five_prime_UTR 35.0%
TAAGGCAGAAGAGATTATTG+AGG + chr1_3:58190817-58190836 Msa0128460:five_prime_UTR 35.0%
!! TTTTGAGCATGTTTGGGTTT+GGG - chr1_3:58191053-58191072 None:intergenic 35.0%
!! TTTTTGAGCATGTTTGGGTT+TGG - chr1_3:58191054-58191073 None:intergenic 35.0%
!!! GGGTTTTTTTGAGCATGTTT+GGG - chr1_3:58191059-58191078 None:intergenic 35.0%
!!! TGGGTTTTTTTGAGCATGTT+TGG - chr1_3:58191060-58191079 None:intergenic 35.0%
! GCACCCTTTTTCCTTTTATT+GGG - chr1_3:58191079-58191098 None:intergenic 35.0%
! TGCACCCTTTTTCCTTTTAT+TGG - chr1_3:58191080-58191099 None:intergenic 35.0%
TTCTGCCTTACTTTGATGTT+TGG - chr1_3:58191292-58191311 None:intergenic 35.0%
CGATCATCTCACAGAAAACA+AGG + chr1_3:58182789-58182808 Msa0128460:five_prime_UTR 40.0%
!! CGATTCAAGCTTGTTAATGG+CGG + chr1_3:58182911-58182930 Msa0128460:five_prime_UTR 40.0%
!! GTTGAACATAGTGCTGATGT+TGG + chr1_3:58183144-58183163 Msa0128460:five_prime_UTR 40.0%
ATGGTTGCGCAAAGTAAACA+TGG + chr1_3:58183358-58183377 Msa0128460:intron 40.0%
!!! TGACACTCATTTTGAAACGG+AGG + chr1_3:58183610-58183629 Msa0128460:intron 40.0%
!!! GACACTCATTTTGAAACGGA+GGG + chr1_3:58183611-58183630 Msa0128460:intron 40.0%
AGTTGCGTGTATATGTGTCT+TGG + chr1_3:58183675-58183694 Msa0128460:intron 40.0%
CAAAGTCGGAACAATCCAAT+TGG - chr1_3:58183852-58183871 None:intergenic 40.0%
ATGTGATTACCTGTGTTGCA+CGG + chr1_3:58183963-58183982 Msa0128460:intron 40.0%
AACTACAAGTTTGAATCCGC+CGG - chr1_3:58184094-58184113 None:intergenic 40.0%
CGGATTCAAACTTGTAGTTC+CGG + chr1_3:58184095-58184114 Msa0128460:intron 40.0%
TTCAAACTTGTAGTTCCGGT+AGG + chr1_3:58184099-58184118 Msa0128460:intron 40.0%
! CAAGAAGTTCCTTTTCCTAC+CGG - chr1_3:58184117-58184136 None:intergenic 40.0%
GGAAAAGGAACTTCTTGTAC+TGG + chr1_3:58184120-58184139 Msa0128460:intron 40.0%
ATTGCAATAGTTGCAGTTCC+AGG + chr1_3:58184285-58184304 Msa0128460:intron 40.0%
! TACGGGTACGTTTTGCAAAT+TGG + chr1_3:58184510-58184529 Msa0128460:intron 40.0%
!!! TTATTTTGGAGGGGAATGGA+AGG + chr1_3:58184805-58184824 Msa0128460:intron 40.0%
!! TATTTTGGAGGGGAATGGAA+GGG + chr1_3:58184806-58184825 Msa0128460:intron 40.0%
!!! AGGGAGGGTTTTGGAAAAAA+AGG + chr1_3:58184825-58184844 Msa0128460:intron 40.0%
TGAGTTCCCCCAAATAATGT+GGG - chr1_3:58184932-58184951 None:intergenic 40.0%
TTGAGTTCCCCCAAATAATG+TGG - chr1_3:58184933-58184952 None:intergenic 40.0%
TATTAGAGGAGGACTTTGGA+GGG + chr1_3:58184959-58184978 Msa0128460:intron 40.0%
! CTTTGTTTGGAAGTTTGGAG+GGG - chr1_3:58185140-58185159 None:intergenic 40.0%
!! GCTTTGTTTGGAAGTTTGGA+GGG - chr1_3:58185141-58185160 None:intergenic 40.0%
GCTAACTCACTTAGATGGAT+AGG + chr1_3:58185214-58185233 Msa0128460:intron 40.0%
CTCACTTAGATGGATAGGTT+TGG + chr1_3:58185219-58185238 Msa0128460:intron 40.0%
! CACAGAAGTATAGTAGCACT+GGG - chr1_3:58185258-58185277 None:intergenic 40.0%
ACGTGTGTACTTGACTTTGT+AGG + chr1_3:58185459-58185478 Msa0128460:intron 40.0%
TCTGTACATGACCTGGTAAA+TGG - chr1_3:58185525-58185544 None:intergenic 40.0%
GTACAGACCGCTTAAAGATT+TGG + chr1_3:58185538-58185557 Msa0128460:five_prime_UTR 40.0%
AGACCGCTTAAAGATTTGGA+TGG + chr1_3:58185542-58185561 Msa0128460:five_prime_UTR 40.0%
AATTCCGGGTGCAAAAGATT+TGG + chr1_3:58185565-58185584 Msa0128460:five_prime_UTR 40.0%
! ACAACCAAATCTTTTGCACC+CGG - chr1_3:58185572-58185591 None:intergenic 40.0%
TATAGGGACTATCAGAACAG+AGG + chr1_3:58186080-58186099 Msa0128460:intron 40.0%
TCGTGACTATGTTAGGTTTC+TGG + chr1_3:58186145-58186164 Msa0128460:intron 40.0%
CGTGACTATGTTAGGTTTCT+GGG + chr1_3:58186146-58186165 Msa0128460:intron 40.0%
! GGGTATTTTCTTAGCCAGTA+AGG + chr1_3:58186166-58186185 Msa0128460:intron 40.0%
TGGCGAATAAATCACCTTAC+TGG - chr1_3:58186183-58186202 None:intergenic 40.0%
AAACTGAAACTTCCAGTGTG+AGG - chr1_3:58186259-58186278 None:intergenic 40.0%
CCCTTCAAAGAAGATCTGAA+AGG - chr1_3:58186450-58186469 None:intergenic 40.0%
TAGGCTTGAGACTAATGTTG+AGG - chr1_3:58186480-58186499 None:intergenic 40.0%
CTTTATTGTGGCCAATCTCT+TGG - chr1_3:58186670-58186689 None:intergenic 40.0%
TTGAGAACACCTTGGAAAGT+TGG - chr1_3:58187256-58187275 None:intergenic 40.0%
TGTTGCTGAGAAAAAAGACG+GGG + chr1_3:58187295-58187314 Msa0128460:intron 40.0%
GGATAACATGGAAAAGCTGA+CGG - chr1_3:58187496-58187515 None:intergenic 40.0%
ACTATAAGCAAAAGTCCCCT+AGG + chr1_3:58187644-58187663 Msa0128460:five_prime_UTR 40.0%
AGTCCCCTAGGTTCAAAATT+TGG + chr1_3:58187656-58187675 Msa0128460:five_prime_UTR 40.0%
! GTGCCAAATTTTGAACCTAG+GGG - chr1_3:58187662-58187681 None:intergenic 40.0%
! CTGTGCCAAATTTTGAACCT+AGG - chr1_3:58187664-58187683 None:intergenic 40.0%
! GTCAAAATCTCTAAGAGAGG+AGG + chr1_3:58187700-58187719 Msa0128460:five_prime_UTR 40.0%
AAAGCCATCCCAAATTCTAC+TGG + chr1_3:58187728-58187747 Msa0128460:five_prime_UTR 40.0%
CTTGTGGACCAGTAGAATTT+GGG - chr1_3:58187739-58187758 None:intergenic 40.0%
ACTTGTGGACCAGTAGAATT+TGG - chr1_3:58187740-58187759 None:intergenic 40.0%
CGAAGAGTCTTTACCCTTAT+TGG - chr1_3:58187774-58187793 None:intergenic 40.0%
GTAGAATGCAAAGAAACGTC+AGG - chr1_3:58187878-58187897 None:intergenic 40.0%
!! TCAACTTCTACAAGTGCTGA+TGG + chr1_3:58188070-58188089 Msa0128460:five_prime_UTR 40.0%
GCACATTCAGATGAAAAGCT+CGG + chr1_3:58188097-58188116 Msa0128460:five_prime_UTR 40.0%
TTGATCTACTACCCTGGAAA+AGG - chr1_3:58188161-58188180 None:intergenic 40.0%
TTCACATTGATCTACTACCC+TGG - chr1_3:58188167-58188186 None:intergenic 40.0%
GATCAATGTGAAGACAGAGA+AGG + chr1_3:58188175-58188194 Msa0128460:five_prime_UTR 40.0%
ATCAAATGCCAATGTGTTGG+AGG - chr1_3:58188557-58188576 None:intergenic 40.0%
GCATTTGATAAGCCTATCTC+AGG + chr1_3:58188568-58188587 Msa0128460:five_prime_UTR 40.0%
GATTCTGCATTTCCTGAGAT+AGG - chr1_3:58188583-58188602 None:intergenic 40.0%
TTTCCAAAAACCGTTGCATC+AGG - chr1_3:58188685-58188704 None:intergenic 40.0%
!! TGATGCAACGGTTTTTGGAA+AGG + chr1_3:58188684-58188703 Msa0128460:five_prime_UTR 40.0%
!! GATGCAACGGTTTTTGGAAA+GGG + chr1_3:58188685-58188704 Msa0128460:five_prime_UTR 40.0%
!! ATGCAACGGTTTTTGGAAAG+GGG + chr1_3:58188686-58188705 Msa0128460:five_prime_UTR 40.0%
TGATGAACACTCAAGATGTG+TGG - chr1_3:58188746-58188765 None:intergenic 40.0%
! TCTAGAACCCAAAGTTCTCT+TGG - chr1_3:58188878-58188897 None:intergenic 40.0%
AAAACTACTCAGCGAGATGA+AGG + chr1_3:58188946-58188965 Msa0128460:five_prime_UTR 40.0%
!! TGCTATTTCTTTGCTTCTGC+TGG - chr1_3:58188983-58189002 None:intergenic 40.0%
AATAGCAACTTCTGGTGTGA+AGG + chr1_3:58188996-58189015 Msa0128460:five_prime_UTR 40.0%
TCTTCTGCATACTCACTAAC+CGG - chr1_3:58189075-58189094 None:intergenic 40.0%
!!! TGGTGGCAGAACTGATTTTT+TGG + chr1_3:58189098-58189117 Msa0128460:five_prime_UTR 40.0%
ATGTGAAGTAGAGTTGGGAA+TGG + chr1_3:58189149-58189168 Msa0128460:five_prime_UTR 40.0%
!!! GTCTTCTTGGTTTTACTTGC+AGG - chr1_3:58189375-58189394 None:intergenic 40.0%
GAAGTTAGCGAAATCGGAAA+AGG + chr1_3:58189407-58189426 Msa0128460:five_prime_UTR 40.0%
ATCGGAAAAGGCAGTATTTG+GGG + chr1_3:58189419-58189438 Msa0128460:five_prime_UTR 40.0%
TCCAAATGAGACAAGAGATG+AGG + chr1_3:58189449-58189468 Msa0128460:five_prime_UTR 40.0%
CAGACAGTGACATTTCTTTC+AGG - chr1_3:58189488-58189507 None:intergenic 40.0%
AGACCAAATGATGAAGAGCA+TGG + chr1_3:58189585-58189604 Msa0128460:five_prime_UTR 40.0%
! TGATGAAGAGCATGGTTTAG+AGG + chr1_3:58189593-58189612 Msa0128460:five_prime_UTR 40.0%
GCCAGCAAATATCAAGTCTA+AGG + chr1_3:58189659-58189678 Msa0128460:five_prime_UTR 40.0%
TGATCAAGCGTTTGAAAGGA+AGG + chr1_3:58189790-58189809 Msa0128460:five_prime_UTR 40.0%
GATCAAGCGTTTGAAAGGAA+GGG + chr1_3:58189791-58189810 Msa0128460:five_prime_UTR 40.0%
ATGACCACTGATGAGAATCA+CGG - chr1_3:58189821-58189840 None:intergenic 40.0%
TTCTCATCAGTGGTCATATC+AGG + chr1_3:58189824-58189843 Msa0128460:five_prime_UTR 40.0%
TCATAGCTCCAGATCCTATA+AGG + chr1_3:58189856-58189875 Msa0128460:five_prime_UTR 40.0%
TCAGGAAGGTAAGGAAAAGT+AGG + chr1_3:58189909-58189928 Msa0128460:intron 40.0%
ATTGTCTAACTAATCTCGGG+TGG + chr1_3:58189995-58190014 Msa0128460:intron 40.0%
TTTCTTAAGTGCTAGTAGCC+AGG + chr1_3:58190043-58190062 Msa0128460:five_prime_UTR 40.0%
!! CCATTTTTGTGCCACTCATA+AGG - chr1_3:58190092-58190111 None:intergenic 40.0%
CCTTATGAGTGGCACAAAAA+TGG + chr1_3:58190089-58190108 Msa0128460:five_prime_UTR 40.0%
AAAAATGGTCTCAGTGAGGA+CGG + chr1_3:58190104-58190123 Msa0128460:five_prime_UTR 40.0%
!! TGATTGTTTTGCTCCACCTT+TGG + chr1_3:58190220-58190239 Msa0128460:five_prime_UTR 40.0%
! TCATATTTTCTCCTTCGTCC+GGG + chr1_3:58190294-58190313 Msa0128460:intron 40.0%
! TTTTCGCCTTCATATGGGAA+TGG + chr1_3:58190407-58190426 Msa0128460:intron 40.0%
ATATGGGAATGGATGGGTAT+AGG + chr1_3:58190418-58190437 Msa0128460:intron 40.0%
TCAAGAAAGCGAGTATAAGG+AGG - chr1_3:58190596-58190615 None:intergenic 40.0%
TACTCGCTTTCTTGATACTG+GGG + chr1_3:58190601-58190620 Msa0128460:five_prime_UTR 40.0%
TGAGATACCTTGTGTTGTAG+CGG + chr1_3:58190691-58190710 Msa0128460:five_prime_UTR 40.0%
! GATATAGCTTGCCAAGTATG+TGG + chr1_3:58190881-58190900 Msa0128460:five_prime_UTR 40.0%
! CTGATTTGTGGTGATGAAAG+TGG + chr1_3:58190929-58190948 Msa0128460:five_prime_UTR 40.0%
!!! TTTGGGTGCTACTGCATTTT+GGG - chr1_3:58191036-58191055 None:intergenic 40.0%
AGTGAAACACACAATGAGCA+GGG - chr1_3:58191180-58191199 None:intergenic 40.0%
TAAGGCAGAAGAGATTATCG+AGG + chr1_3:58191302-58191321 Msa0128460:CDS 40.0%
!! GGAGATTTGATGCTGATTTG+TGG + chr1_3:58191393-58191412 Msa0128460:CDS 40.0%
! CTGATTTGTGGTGATGAAAC+TGG + chr1_3:58191405-58191424 Msa0128460:CDS 40.0%
AGGATTGCAGCAATCGATAT+GGG - chr1_3:58191454-58191473 None:intergenic 40.0%
GGGTGCATTATCTTCATCAA+AGG + chr1_3:58191563-58191582 Msa0128460:CDS 40.0%
GGTGTTCATTTCGCTCTCTT+TGG + chr1_3:58182763-58182782 Msa0128460:five_prime_UTR 45.0%
!! TTCAAGCTTGTTAATGGCGG+TGG + chr1_3:58182914-58182933 Msa0128460:five_prime_UTR 45.0%
GTTCTTATCACAGGACGATC+CGG + chr1_3:58183071-58183090 Msa0128460:intron 45.0%
GAGAGAGGATGGAAAGATGT+TGG + chr1_3:58183107-58183126 Msa0128460:five_prime_UTR 45.0%
!! AGATGTTGGTGACTGCATTG+TGG + chr1_3:58183121-58183140 Msa0128460:five_prime_UTR 45.0%
!! GATGTTGGTGACTGCATTGT+GGG + chr1_3:58183122-58183141 Msa0128460:five_prime_UTR 45.0%
AATGCCTGTTGATGCTACCT+CGG + chr1_3:58183167-58183186 Msa0128460:five_prime_UTR 45.0%
GTAGGCCTCCCAAATTTGAT+TGG + chr1_3:58183903-58183922 Msa0128460:intron 45.0%
TGTGATTACCTGTGTTGCAC+GGG + chr1_3:58183964-58183983 Msa0128460:intron 45.0%
! AACAAAGGTACGGGTACGTT+AGG + chr1_3:58184017-58184036 Msa0128460:intron 45.0%
CTTGTAGTTCCGGTAGGAAA+AGG + chr1_3:58184105-58184124 Msa0128460:intron 45.0%
TTTGCAAAACGTACCCGTAC+CGG - chr1_3:58184509-58184528 None:intergenic 45.0%
!! AGGTAATCACCTCTGAAGCA+CGG - chr1_3:58184541-58184560 None:intergenic 45.0%
CTCAAGGTTCTCATCTGCAA+TGG - chr1_3:58184617-58184636 None:intergenic 45.0%
TGCAGATGAGAACCTTGAGT+TGG + chr1_3:58184618-58184637 Msa0128460:intron 45.0%
TGTTTGATAGGGGAGAGCTT+TGG + chr1_3:58184877-58184896 Msa0128460:intron 45.0%
GTTTGATAGGGGAGAGCTTT+GGG + chr1_3:58184878-58184897 Msa0128460:intron 45.0%
TTTGATAGGGGAGAGCTTTG+GGG + chr1_3:58184879-58184898 Msa0128460:intron 45.0%
GTATTAGAGGAGGACTTTGG+AGG + chr1_3:58184958-58184977 Msa0128460:intron 45.0%
TCAGGGGGCTTGGAAATATA+GGG - chr1_3:58185111-58185130 None:intergenic 45.0%
TTCAGGGGGCTTGGAAATAT+AGG - chr1_3:58185112-58185131 None:intergenic 45.0%
!! GGCTTTGTTTGGAAGTTTGG+AGG - chr1_3:58185142-58185161 None:intergenic 45.0%
! GCACAGAAGTATAGTAGCAC+TGG - chr1_3:58185259-58185278 None:intergenic 45.0%
! GATTTGGTTGTCTGCTTGAC+TGG + chr1_3:58185581-58185600 Msa0128460:five_prime_UTR 45.0%
TTCCCTCTTCAGACAATGGT+TGG + chr1_3:58185721-58185740 Msa0128460:intron 45.0%
TAGAAAACTGTGCACCCATC+AGG - chr1_3:58185747-58185766 None:intergenic 45.0%
! TGCACAGTTTTCTAAGCCGT+TGG + chr1_3:58185753-58185772 Msa0128460:five_prime_UTR 45.0%
! GTAACCTTGTTTGCGACCAA+CGG - chr1_3:58185772-58185791 None:intergenic 45.0%
AACAGAGGTGACAAAACGTG+AGG + chr1_3:58186095-58186114 Msa0128460:intron 45.0%
ACAGAGGTGACAAAACGTGA+GGG + chr1_3:58186096-58186115 Msa0128460:intron 45.0%
! CAGATCTTCTTTGAAGGGAG+AGG + chr1_3:58186452-58186471 Msa0128460:intron 45.0%
CATACCAATCTTCCAGCCAA+CGG - chr1_3:58186704-58186723 None:intergenic 45.0%
GATCGTCGGTCTCAAAATAC+AGG - chr1_3:58187078-58187097 None:intergenic 45.0%
GTTGCTGAGAAAAAAGACGG+GGG + chr1_3:58187296-58187315 Msa0128460:intron 45.0%
!! ACTAGAAATGATGGCGGAAG+AGG + chr1_3:58187565-58187584 Msa0128460:five_prime_UTR 45.0%
! TAAGGATTCTGAGGATGAGG+CGG + chr1_3:58187589-58187608 Msa0128460:five_prime_UTR 45.0%
TGGACCAGTAGAATTTGGGA+TGG - chr1_3:58187735-58187754 None:intergenic 45.0%
ATGTCAATATCCTGGAAGCC+AGG - chr1_3:58187968-58187987 None:intergenic 45.0%
!! TCGGTGCTACGAGTTATTCT+AGG + chr1_3:58188116-58188135 Msa0128460:five_prime_UTR 45.0%
! CTTTTCTACCTTGGTGGAAG+GGG - chr1_3:58188215-58188234 None:intergenic 45.0%
! CCTTTTCTACCTTGGTGGAA+GGG - chr1_3:58188216-58188235 None:intergenic 45.0%
! ACTTGCCTTTTCTACCTTGG+TGG - chr1_3:58188221-58188240 None:intergenic 45.0%
! CTCACTTGCCTTTTCTACCT+TGG - chr1_3:58188224-58188243 None:intergenic 45.0%
CAAGGTAGAAAAGGCAAGTG+AGG + chr1_3:58188222-58188241 Msa0128460:five_prime_UTR 45.0%
TCTGCATGTGTTGAAGGTTC+TGG + chr1_3:58188253-58188272 Msa0128460:five_prime_UTR 45.0%
CTGCATGTGTTGAAGGTTCT+GGG + chr1_3:58188254-58188273 Msa0128460:five_prime_UTR 45.0%
!! GAAGGTTCTGGGAAAGAAAC+TGG + chr1_3:58188265-58188284 Msa0128460:five_prime_UTR 45.0%
GAAAGAAAGCCATCAGACAC+AGG - chr1_3:58188472-58188491 None:intergenic 45.0%
CATCTTGAGTGTTCATCACC+AGG + chr1_3:58188748-58188767 Msa0128460:five_prime_UTR 45.0%
TTGCGCGGTGACTTTCTAAT+CGG - chr1_3:58188844-58188863 None:intergenic 45.0%
TCAGCTGCCAAGAGAACTTT+GGG + chr1_3:58188868-58188887 Msa0128460:five_prime_UTR 45.0%
!! TTGGGTTCTAGACCCAGAAA+AGG + chr1_3:58188886-58188905 Msa0128460:five_prime_UTR 45.0%
AGTGAGTATGCAGAAGATGC+TGG + chr1_3:58189078-58189097 Msa0128460:five_prime_UTR 45.0%
AATGGCTCCGGATGAAGAAT+TGG + chr1_3:58189167-58189186 Msa0128460:five_prime_UTR 45.0%
TTCTAACTTCTCTTCTGCCG+AGG - chr1_3:58189217-58189236 None:intergenic 45.0%
GAAGTTAGAAGCAGTTGACC+AGG + chr1_3:58189227-58189246 Msa0128460:five_prime_UTR 45.0%
GAGGTTGAGTCTAACTCTGA+AGG - chr1_3:58189318-58189337 None:intergenic 45.0%
GCCTCATCTCTTGTCTCATT+TGG - chr1_3:58189453-58189472 None:intergenic 45.0%
AATGAGACAAGAGATGAGGC+AGG + chr1_3:58189453-58189472 Msa0128460:five_prime_UTR 45.0%
ATGAGACAAGAGATGAGGCA+GGG + chr1_3:58189454-58189473 Msa0128460:five_prime_UTR 45.0%
GCTGAAACTCCTTTCTCTGT+AGG - chr1_3:58189767-58189786 None:intergenic 45.0%
ACAGAGAAAGGAGTTTCAGC+AGG + chr1_3:58189767-58189786 Msa0128460:five_prime_UTR 45.0%
CAGGTGATCAAGCGTTTGAA+AGG + chr1_3:58189786-58189805 Msa0128460:five_prime_UTR 45.0%
TTTGCCGTGATTCTCATCAG+TGG + chr1_3:58189814-58189833 Msa0128460:five_prime_UTR 45.0%
TAGCTCCAGATCCTATAAGG+AGG + chr1_3:58189859-58189878 Msa0128460:five_prime_UTR 45.0%
TCTGTCCTCCTTATAGGATC+TGG - chr1_3:58189867-58189886 None:intergenic 45.0%
!!! TTTTTTGCCGCTACTGCATC+AGG + chr1_3:58189891-58189910 Msa0128460:five_prime_UTR 45.0%
TTACCTTCCTGATGCAGTAG+CGG - chr1_3:58189901-58189920 None:intergenic 45.0%
! CTGGCAATAATTTTCCTGCC+TGG - chr1_3:58190064-58190083 None:intergenic 45.0%
GGCAGGAAAATTATTGCCAG+AGG + chr1_3:58190064-58190083 Msa0128460:five_prime_UTR 45.0%
GCACAAAAATGGTCTCAGTG+AGG + chr1_3:58190100-58190119 Msa0128460:five_prime_UTR 45.0%
TCTTGGAGCCTCCATATTGA+TGG - chr1_3:58190132-58190151 None:intergenic 45.0%
ATATGGAGGCTCCAAGAAAG+TGG + chr1_3:58190135-58190154 Msa0128460:five_prime_UTR 45.0%
CGGCTGTTGAAAGAAAGAAC+AGG + chr1_3:58190158-58190177 Msa0128460:five_prime_UTR 45.0%
AACAATGCGCATCCCATAGA+AGG - chr1_3:58190192-58190211 None:intergenic 45.0%
GGGATGCGCATTGTTGTATA+TGG + chr1_3:58190197-58190216 Msa0128460:five_prime_UTR 45.0%
GCCTTCATATGGGAATGGAT+GGG + chr1_3:58190412-58190431 Msa0128460:intron 45.0%
ACCCATCCATTCCCATATGA+AGG - chr1_3:58190416-58190435 None:intergenic 45.0%
ACAGGATACTCTTAAGCGTG+CGG + chr1_3:58190535-58190554 Msa0128460:intron 45.0%
AAGTAGTCCGCTACAACACA+AGG - chr1_3:58190701-58190720 None:intergenic 45.0%
!! TTGTGTTGTAGCGGACTACT+TGG + chr1_3:58190700-58190719 Msa0128460:five_prime_UTR 45.0%
GTACAGTACGTGTCTCTCAA+GGG - chr1_3:58190753-58190772 None:intergenic 45.0%
CTTGAGAGACACGTACTGTA+CGG + chr1_3:58190752-58190771 Msa0128460:five_prime_UTR 45.0%
GGCAGAAGAGATTATTGAGG+AGG + chr1_3:58190820-58190839 Msa0128460:five_prime_UTR 45.0%
TTTCCAGGGATCCACATACT+TGG - chr1_3:58190895-58190914 None:intergenic 45.0%
CATGACATCTCCTCTTTCCA+GGG - chr1_3:58190909-58190928 None:intergenic 45.0%
!! GGAGATGTCATGCTGATTTG+TGG + chr1_3:58190917-58190936 Msa0128460:five_prime_UTR 45.0%
!!! GTTTGGGTGCTACTGCATTT+TGG - chr1_3:58191037-58191056 None:intergenic 45.0%
ACACAATGAGCAGGGACTAA+CGG - chr1_3:58191172-58191191 None:intergenic 45.0%
GAGTGAAACACACAATGAGC+AGG - chr1_3:58191181-58191200 None:intergenic 45.0%
!!! GGCGACCCTTAATGGATTTT+AGG + chr1_3:58191259-58191278 Msa0128460:exon 45.0%
TCATCATTGCAACCCTCATG+AGG - chr1_3:58191336-58191355 None:intergenic 45.0%
! GATGTAGCTTGCCAAGTATG+TGG + chr1_3:58191357-58191376 Msa0128460:CDS 45.0%
! GGTGATGAAACTGGTTCCAT+TGG + chr1_3:58191414-58191433 Msa0128460:CDS 45.0%
GAGGATTGCAGCAATCGATA+TGG - chr1_3:58191455-58191474 None:intergenic 45.0%
!! AAAAATTAATAAAAAAAAAG+AGG - chr1_3:58182820-58182839 None:intergenic 5.0%
!! TTAAAAACAAAAAAATAAAT+TGG + chr1_3:58184426-58184445 Msa0128460:intron 5.0%
!! TAATGGCGGTGGAGTTGATG+TGG + chr1_3:58182925-58182944 Msa0128460:five_prime_UTR 50.0%
!! AATGGCGGTGGAGTTGATGT+GGG + chr1_3:58182926-58182945 Msa0128460:five_prime_UTR 50.0%
GTTGATGTGGGGAAGAACAC+TGG + chr1_3:58182938-58182957 Msa0128460:five_prime_UTR 50.0%
CAAACCGAGGTAGCATCAAC+AGG - chr1_3:58183174-58183193 None:intergenic 50.0%
GTACGGCTGTGGTACTCTTA+GGG - chr1_3:58184389-58184408 None:intergenic 50.0%
ACCTTGGTACGGTTACGGTA+CGG - chr1_3:58184406-58184425 None:intergenic 50.0%
TTGCAAAACGTACCCGTACC+GGG - chr1_3:58184508-58184527 None:intergenic 50.0%
!! GGTAATCACCTCTGAAGCAC+GGG - chr1_3:58184540-58184559 None:intergenic 50.0%
CAGGGGGCTTGGAAATATAG+GGG - chr1_3:58185110-58185129 None:intergenic 50.0%
GTTTGGAAGTTTGGAGGGGA+GGG - chr1_3:58185136-58185155 None:intergenic 50.0%
TGTTTGGAAGTTTGGAGGGG+AGG - chr1_3:58185137-58185156 None:intergenic 50.0%
TAAGCGGTCTGTACATGACC+TGG - chr1_3:58185532-58185551 None:intergenic 50.0%
CCATAATGTCATCCCGATCC+TGG - chr1_3:58185616-58185635 None:intergenic 50.0%
CCAGGATCGGGATGACATTA+TGG + chr1_3:58185613-58185632 Msa0128460:five_prime_UTR 50.0%
GGCCAACCATTGTCTGAAGA+GGG - chr1_3:58185726-58185745 None:intergenic 50.0%
AGGCCAACCATTGTCTGAAG+AGG - chr1_3:58185727-58185746 None:intergenic 50.0%
!! TCAGACAATGGTTGGCCTGA+TGG + chr1_3:58185729-58185748 Msa0128460:intron 50.0%
!! CAGACAATGGTTGGCCTGAT+GGG + chr1_3:58185730-58185749 Msa0128460:intron 50.0%
TAAGCCGTTGGTCGCAAACA+AGG + chr1_3:58185765-58185784 Msa0128460:five_prime_UTR 50.0%
GAAACTTCCAGTGTGAGGAG+AGG - chr1_3:58186254-58186273 None:intergenic 50.0%
GTACGAGCTTGCCAAGAGAT+TGG + chr1_3:58186656-58186675 Msa0128460:five_prime_UTR 50.0%
GCTAGTTAATCACCGTTGGC+TGG + chr1_3:58186689-58186708 Msa0128460:five_prime_UTR 50.0%
! ATCACCGTTGGCTGGAAGAT+TGG + chr1_3:58186697-58186716 Msa0128460:five_prime_UTR 50.0%
!! AATGATGGCGGAAGAGGCTA+AGG + chr1_3:58187571-58187590 Msa0128460:five_prime_UTR 50.0%
GGAAGAGGCTAAGGATTCTG+AGG + chr1_3:58187580-58187599 Msa0128460:five_prime_UTR 50.0%
! GGCTAAGGATTCTGAGGATG+AGG + chr1_3:58187586-58187605 Msa0128460:five_prime_UTR 50.0%
ATTCCAAGCTGGGGCAATCA+GGG + chr1_3:58187615-58187634 Msa0128460:five_prime_UTR 50.0%
TTTGGCACAGCTGTGACTCA+TGG + chr1_3:58187674-58187693 Msa0128460:five_prime_UTR 50.0%
CAACCTGAAGGTAAGCTGTC+AGG + chr1_3:58187850-58187869 Msa0128460:intron 50.0%
GAACCTGACAGCTTACCTTC+AGG - chr1_3:58187856-58187875 None:intergenic 50.0%
!!! GCTGATTTTCCAAAGGCACC+TGG + chr1_3:58187947-58187966 Msa0128460:intron 50.0%
TCTTGAAACCCCTTCCACCA+AGG + chr1_3:58188204-58188223 Msa0128460:five_prime_UTR 50.0%
CCCTTCCACCAAGGTAGAAA+AGG + chr1_3:58188213-58188232 Msa0128460:five_prime_UTR 50.0%
! GCCTTTTCTACCTTGGTGGA+AGG - chr1_3:58188217-58188236 None:intergenic 50.0%
!! AGGATCGAAAGTGCCATCTG+TGG + chr1_3:58188435-58188454 Msa0128460:five_prime_UTR 50.0%
AGAAAGCCATCAGACACAGG+TGG - chr1_3:58188469-58188488 None:intergenic 50.0%
AGCTTCTGCCTCCAACACAT+TGG + chr1_3:58188546-58188565 Msa0128460:five_prime_UTR 50.0%
TAGTGGTGAGCCTGATGCAA+CGG + chr1_3:58188672-58188691 Msa0128460:five_prime_UTR 50.0%
! GAGCCTGATGCAACGGTTTT+TGG + chr1_3:58188679-58188698 Msa0128460:five_prime_UTR 50.0%
!! ACGGTTTTTGGAAAGGGGCA+AGG + chr1_3:58188691-58188710 Msa0128460:five_prime_UTR 50.0%
GTCAGCTGCCAAGAGAACTT+TGG + chr1_3:58188867-58188886 Msa0128460:five_prime_UTR 50.0%
GAGTATGCAGAAGATGCTGG+TGG + chr1_3:58189081-58189100 Msa0128460:five_prime_UTR 50.0%
AGTAGAGTTGGGAATGGCTC+CGG + chr1_3:58189155-58189174 Msa0128460:five_prime_UTR 50.0%
CTTTGCAGCTGTGGTCTTCT+TGG - chr1_3:58189388-58189407 None:intergenic 50.0%
CGCTAACTTCTTTGCAGCTG+TGG - chr1_3:58189397-58189416 None:intergenic 50.0%
ACTCCTTTCTCTGTAGGCGA+TGG - chr1_3:58189761-58189780 None:intergenic 50.0%
GCTACTGCATCAGGAAGGTA+AGG + chr1_3:58189900-58189919 Msa0128460:intron 50.0%
ACTAATCTCGGGTGGAATGC+AGG + chr1_3:58190003-58190022 Msa0128460:intron 50.0%
TTAAGTGCTAGTAGCCAGGC+AGG + chr1_3:58190047-58190066 Msa0128460:five_prime_UTR 50.0%
!! TGAGGACGGTGCCATCAATA+TGG + chr1_3:58190118-58190137 Msa0128460:five_prime_UTR 50.0%
! TTCAACAGCCGCCACTTTCT+TGG - chr1_3:58190149-58190168 None:intergenic 50.0%
ACAGGTCATGGTGCCTTCTA+TGG + chr1_3:58190176-58190195 Msa0128460:five_prime_UTR 50.0%
CAGGTCATGGTGCCTTCTAT+GGG + chr1_3:58190177-58190196 Msa0128460:five_prime_UTR 50.0%
GCTAAGGGAAAAGGAGTTGG+AGG - chr1_3:58190333-58190352 None:intergenic 50.0%
CGAGCTAAGGGAAAAGGAGT+TGG - chr1_3:58190336-58190355 None:intergenic 50.0%
! CTGGTTCGAGCTAAGGGAAA+AGG - chr1_3:58190342-58190361 None:intergenic 50.0%
CGCCTTCATATGGGAATGGA+TGG + chr1_3:58190411-58190430 Msa0128460:intron 50.0%
GACTATGCCATAGTTAGCCC+TGG + chr1_3:58190626-58190645 Msa0128460:five_prime_UTR 50.0%
!! CATGCCACGTGTCGATTTGT+GGG + chr1_3:58190649-58190668 Msa0128460:five_prime_UTR 50.0%
CGTACAGTACGTGTCTCTCA+AGG - chr1_3:58190754-58190773 None:intergenic 50.0%
ACTGTACGGCACTCATGCTT+TGG + chr1_3:58190766-58190785 Msa0128460:five_prime_UTR 50.0%
GCACTCATGCTTTGGCAGAT+AGG + chr1_3:58190774-58190793 Msa0128460:five_prime_UTR 50.0%
GGAGGTTATTCCTCCTCATG+AGG + chr1_3:58190838-58190857 Msa0128460:five_prime_UTR 50.0%
TTGCCAAGTATGTGGATCCC+TGG + chr1_3:58190889-58190908 Msa0128460:five_prime_UTR 50.0%
GTATGTGGATCCCTGGAAAG+AGG + chr1_3:58190896-58190915 Msa0128460:five_prime_UTR 50.0%
GCATGACATCTCCTCTTTCC+AGG - chr1_3:58190910-58190929 None:intergenic 50.0%
GGTGATGAAAGTGGTTCCGT+TGG + chr1_3:58190938-58190957 Msa0128460:five_prime_UTR 50.0%
GGGTGCATTGTCTTCATCCA+AGG + chr1_3:58191093-58191112 Msa0128460:five_prime_UTR 50.0%
CACATTTGGGCGACCCTTAA+TGG + chr1_3:58191251-58191270 Msa0128460:exon 50.0%
GGCAGAAGAGATTATCGAGG+AGG + chr1_3:58191305-58191324 Msa0128460:CDS 50.0%
GAGGAGGTCATTCCTCATGA+GGG + chr1_3:58191321-58191340 Msa0128460:CDS 50.0%
CTTGCCAAGTATGTGGATCG+CGG + chr1_3:58191364-58191383 Msa0128460:CDS 50.0%
TTGCCAAGTATGTGGATCGC+GGG + chr1_3:58191365-58191384 Msa0128460:CDS 50.0%
TTTCCCGCGATCCACATACT+TGG - chr1_3:58191371-58191390 None:intergenic 50.0%
! GAAACTGGTTCCATTGGCTG+TGG + chr1_3:58191420-58191439 Msa0128460:CDS 50.0%
TGGGCAAAACCAATCCTCCT+CGG - chr1_3:58191017-58191036 None:intergenic 50.0%
CACTCTTCGCGAGTCTTTCG+CGG + chr1_3:58182742-58182761 Msa0128460:five_prime_UTR 55.0%
!! ATGGCGGTGGAGTTGATGTG+GGG + chr1_3:58182927-58182946 Msa0128460:five_prime_UTR 55.0%
TCTCTCGCAGCAACACACAC+CGG - chr1_3:58183093-58183112 None:intergenic 55.0%
! TGTGTTGCTGCGAGAGAGGA+TGG + chr1_3:58183096-58183115 Msa0128460:five_prime_UTR 55.0%
TTACCTGTGTTGCACGGGTG+CGG + chr1_3:58183969-58183988 Msa0128460:intron 55.0%
GGTACGGCTGTGGTACTCTT+AGG - chr1_3:58184390-58184409 None:intergenic 55.0%
CATACGAGTACCAGTACCCG+CGG + chr1_3:58184478-58184497 Msa0128460:intron 55.0%
! TTGGAGTACCCGTGCTTCAG+AGG + chr1_3:58184529-58184548 Msa0128460:intron 55.0%
TTTGGAGGGGAATGGAAGGG+AGG + chr1_3:58184809-58184828 Msa0128460:intron 55.0%
TTGGAGGGGAATGGAAGGGA+GGG + chr1_3:58184810-58184829 Msa0128460:intron 55.0%
! GGGAATGGAAGGGAGGGTTT+TGG + chr1_3:58184816-58184835 Msa0128460:intron 55.0%
! CTTGACTGGCTATCTACGCC+AGG + chr1_3:58185595-58185614 Msa0128460:five_prime_UTR 55.0%
CTGGCTATCTACGCCAGGAT+CGG + chr1_3:58185600-58185619 Msa0128460:five_prime_UTR 55.0%
TGGCTATCTACGCCAGGATC+GGG + chr1_3:58185601-58185620 Msa0128460:five_prime_UTR 55.0%
AGCACTACCTCTCCTCACAC+TGG + chr1_3:58186244-58186263 Msa0128460:intron 55.0%
TGAGGCGGAAGATTCCAAGC+TGG + chr1_3:58187604-58187623 Msa0128460:five_prime_UTR 55.0%
GAGGCGGAAGATTCCAAGCT+GGG + chr1_3:58187605-58187624 Msa0128460:five_prime_UTR 55.0%
AGGCGGAAGATTCCAAGCTG+GGG + chr1_3:58187606-58187625 Msa0128460:five_prime_UTR 55.0%
GATTCCAAGCTGGGGCAATC+AGG + chr1_3:58187614-58187633 Msa0128460:five_prime_UTR 55.0%
TTCCAAGCTGGGGCAATCAG+GGG + chr1_3:58187616-58187635 Msa0128460:five_prime_UTR 55.0%
GGTGGCTCATCAACCACAGA+TGG - chr1_3:58188451-58188470 None:intergenic 55.0%
GATGAGCCACCTGTGTCTGA+TGG + chr1_3:58188460-58188479 Msa0128460:five_prime_UTR 55.0%
TGTGTTGGAGGCAGAAGCTG+CGG - chr1_3:58188545-58188564 None:intergenic 55.0%
! TTGGCAGCTGACTTCTTGCG+CGG - chr1_3:58188859-58188878 None:intergenic 55.0%
!! TTCTGGTGTGAAGGAGCGTC+AGG + chr1_3:58189005-58189024 Msa0128460:five_prime_UTR 55.0%
TGGCCATCGCCTACAGAGAA+AGG + chr1_3:58189755-58189774 Msa0128460:five_prime_UTR 55.0%
TTGCCGCTACTGCATCAGGA+AGG + chr1_3:58189895-58189914 Msa0128460:five_prime_UTR 55.0%
AATCTCGGGTGGAATGCAGG+TGG + chr1_3:58190006-58190025 Msa0128460:intron 55.0%
! TGCCAGAGGAGCCTTATGAG+TGG + chr1_3:58190078-58190097 Msa0128460:five_prime_UTR 55.0%
TGCCACTCATAAGGCTCCTC+TGG - chr1_3:58190083-58190102 None:intergenic 55.0%
!! GGACGGTGCCATCAATATGG+AGG + chr1_3:58190121-58190140 Msa0128460:five_prime_UTR 55.0%
TGGAGGCTCCAAGAAAGTGG+CGG + chr1_3:58190138-58190157 Msa0128460:five_prime_UTR 55.0%
CTTCGTCCGGGTTTGAACTC+CGG + chr1_3:58190306-58190325 Msa0128460:intron 55.0%
GGGAAAAGGAGTTGGAGGTC+CGG - chr1_3:58190328-58190347 None:intergenic 55.0%
!! GCTCAGCTGGTTCGAGCTAA+GGG - chr1_3:58190348-58190367 None:intergenic 55.0%
!! AGCTCAGCTGGTTCGAGCTA+AGG - chr1_3:58190349-58190368 None:intergenic 55.0%
CTTAAGCGTGCGGTCAAAGC+TGG + chr1_3:58190545-58190564 Msa0128460:five_prime_UTR 55.0%
TGGCATGCCAGGGCTAACTA+TGG - chr1_3:58190636-58190655 None:intergenic 55.0%
AATCGACACGTGGCATGCCA+GGG - chr1_3:58190646-58190665 None:intergenic 55.0%
AAATCGACACGTGGCATGCC+AGG - chr1_3:58190647-58190666 None:intergenic 55.0%
!! GCATGCCACGTGTCGATTTG+TGG + chr1_3:58190648-58190667 Msa0128460:five_prime_UTR 55.0%
TGGACCCACAAATCGACACG+TGG - chr1_3:58190656-58190675 None:intergenic 55.0%
GGTTGAGTACGTCTGCAAGC+CGG + chr1_3:58190721-58190740 Msa0128460:five_prime_UTR 55.0%
GTTGAGTACGTCTGCAAGCC+GGG + chr1_3:58190722-58190741 Msa0128460:five_prime_UTR 55.0%
TTGAGTACGTCTGCAAGCCG+GGG + chr1_3:58190723-58190742 Msa0128460:five_prime_UTR 55.0%
TGTCTCTCAAGGGAGAACCC+CGG - chr1_3:58190743-58190762 None:intergenic 55.0%
TCATCGTCGCGATCCTCATG+AGG - chr1_3:58190854-58190873 None:intergenic 55.0%
! GAAAGTGGTTCCGTTGGCTG+TGG + chr1_3:58190944-58190963 Msa0128460:five_prime_UTR 55.0%
AGTACCCACTCCACAGCCAA+CGG - chr1_3:58190957-58190976 None:intergenic 55.0%
CAGCTGTTCCTGAGGAGGAT+TGG + chr1_3:58191005-58191024 Msa0128460:five_prime_UTR 55.0%
GGGCAAAACCAATCCTCCTC+AGG - chr1_3:58191016-58191035 None:intergenic 55.0%
GGGACAGACTCACTTTGCCT+TGG - chr1_3:58191113-58191132 None:intergenic 55.0%
CGAGGAGGTCATTCCTCATG+AGG + chr1_3:58191320-58191339 Msa0128460:CDS 55.0%
GTATGTGGATCGCGGGAAAG+AGG + chr1_3:58191372-58191391 Msa0128460:CDS 55.0%
! TGGTTCCATTGGCTGTGGAG+TGG + chr1_3:58191425-58191444 Msa0128460:CDS 55.0%
! GGTTCCATTGGCTGTGGAGT+GGG + chr1_3:58191426-58191445 Msa0128460:CDS 55.0%
TCCTCGGGAATAGCTGTCAG+CGG - chr1_3:58191477-58191496 None:intergenic 55.0%
CAGCTATTCCCGAGGAGGAT+TGG + chr1_3:58191481-58191500 Msa0128460:CDS 55.0%
GGGCAAAACCAATCCTCCTC+GGG - chr1_3:58191016-58191035 None:intergenic 55.0%
! GGTGTGTGTTGCTGCGAGAG+AGG + chr1_3:58183092-58183111 Msa0128460:five_prime_UTR 60.0%
TACCTGTGTTGCACGGGTGC+GGG + chr1_3:58183970-58183989 Msa0128460:intron 60.0%
GTACGGTTACGGTACGGCTG+TGG - chr1_3:58184400-58184419 None:intergenic 60.0%
GCCGTACCGTAACCGTACCA+AGG + chr1_3:58184402-58184421 Msa0128460:intron 60.0%
!! CGCGGGTACTGGTACTCGTA+TGG - chr1_3:58184480-58184499 None:intergenic 60.0%
!! GATAGGGGAGAGCTTTGGGG+AGG + chr1_3:58184882-58184901 Msa0128460:intron 60.0%
TTTGGAGGGGAGGGCTTCAG+GGG - chr1_3:58185127-58185146 None:intergenic 60.0%
GTTTGGAGGGGAGGGCTTCA+GGG - chr1_3:58185128-58185147 None:intergenic 60.0%
AGTTTGGAGGGGAGGGCTTC+AGG - chr1_3:58185129-58185148 None:intergenic 60.0%
TCCAAGCTGGGGCAATCAGG+GGG + chr1_3:58187617-58187636 Msa0128460:five_prime_UTR 60.0%
!! TCCAAAGGCACCTGGCTTCC+AGG + chr1_3:58187955-58187974 Msa0128460:intron 60.0%
TCCTGGAAGCCAGGTGCCTT+TGG - chr1_3:58187959-58187978 None:intergenic 60.0%
CGGAGTTCAAACCCGGACGA+AGG - chr1_3:58190308-58190327 None:intergenic 60.0%
GGAGGTCCGGAGTTCAAACC+CGG - chr1_3:58190315-58190334 None:intergenic 60.0%
CGTGCGGTCAAAGCTGGAGA+TGG + chr1_3:58190551-58190570 Msa0128460:five_prime_UTR 60.0%
TCGTCGCGATCCTCATGAGG+AGG - chr1_3:58190851-58190870 None:intergenic 60.0%
! TGGTTCCGTTGGCTGTGGAG+TGG + chr1_3:58190949-58190968 Msa0128460:five_prime_UTR 60.0%
! GGTTCCGTTGGCTGTGGAGT+GGG + chr1_3:58190950-58190969 Msa0128460:five_prime_UTR 60.0%
TCCTCAGGAACAGCTGCCAG+CGG - chr1_3:58191001-58191020 None:intergenic 60.0%
GGTACCCACTCCACAGCCAA+TGG - chr1_3:58191433-58191452 None:intergenic 60.0%
TCGGGAATAGCTGTCAGCGG+AGG - chr1_3:58191474-58191493 None:intergenic 60.0%
TCCGCTGACAGCTATTCCCG+AGG + chr1_3:58191473-58191492 Msa0128460:CDS 60.0%
GCTGACAGCTATTCCCGAGG+AGG + chr1_3:58191476-58191495 Msa0128460:CDS 60.0%
TACCCGCACCCGTGCAACAC+AGG - chr1_3:58183975-58183994 None:intergenic 65.0%
GTGTTGCACGGGTGCGGGTA+CGG + chr1_3:58183975-58183994 Msa0128460:intron 65.0%
TGTTGCACGGGTGCGGGTAC+GGG + chr1_3:58183976-58183995 Msa0128460:intron 65.0%
ACGGGTGCGGGTACGGGATA+CGG + chr1_3:58183982-58184001 Msa0128460:intron 65.0%
! ACCAGTACCCGCGGAGTACC+CGG + chr1_3:58184487-58184506 Msa0128460:intron 65.0%
! TACCCGCGGAGTACCCGGTA+CGG + chr1_3:58184492-58184511 Msa0128460:intron 65.0%
TACCCGTACCGGGTACTCCG+CGG - chr1_3:58184498-58184517 None:intergenic 65.0%
TTGGAGGGGAGGGCTTCAGG+GGG - chr1_3:58185126-58185145 None:intergenic 65.0%
TCCCCCTGATTGCCCCAGCT+TGG - chr1_3:58187621-58187640 None:intergenic 65.0%
AGCTGGGGCAATCAGGGGGA+AGG + chr1_3:58187621-58187640 Msa0128460:five_prime_UTR 65.0%
AGGGGGTTGGGTAGCTCAGC+TGG - chr1_3:58190361-58190380 None:intergenic 65.0%
TCAGGAACAGCTGCCAGCGG+AGG - chr1_3:58190998-58191017 None:intergenic 65.0%
TCCGCTGGCAGCTGTTCCTG+AGG + chr1_3:58190997-58191016 Msa0128460:five_prime_UTR 65.0%
GCTGGCAGCTGTTCCTGAGG+AGG + chr1_3:58191000-58191019 Msa0128460:five_prime_UTR 65.0%
ACCGGGTACTCCGCGGGTAC+TGG - chr1_3:58184491-58184510 None:intergenic 70.0%
! ACCCGCGGAGTACCCGGTAC+GGG + chr1_3:58184493-58184512 Msa0128460:intron 70.0%
ACCCGTACCGGGTACTCCGC+GGG - chr1_3:58184497-58184516 None:intergenic 70.0%
CGACTGCTGCGATCCTCCGC+TGG + chr1_3:58190982-58191001 Msa0128460:five_prime_UTR 70.0%
GGGGAGGGCTTCAGGGGGCT+TGG - chr1_3:58185121-58185140 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 58182632 58191593 58182632 ID=Msa0128460;Name=Msa0128460
chr1_3 mRNA 58182632 58191593 58182632 ID=Msa0128460-mRNA-1;Parent=Msa0128460;Name=Msa0128460-mRNA-1;_AED=0.05;_eAED=0.05;_QI=3868|1|0.90|1|0.8|0.72|11|0|107
chr1_3 exon 58182632 58182810 58182632 ID=Msa0128460-mRNA-1:exon:18671;Parent=Msa0128460-mRNA-1
chr1_3 exon 58182908 58182997 58182908 ID=Msa0128460-mRNA-1:exon:18672;Parent=Msa0128460-mRNA-1
chr1_3 exon 58183084 58183188 58183084 ID=Msa0128460-mRNA-1:exon:18673;Parent=Msa0128460-mRNA-1
chr1_3 exon 58185533 58185634 58185533 ID=Msa0128460-mRNA-1:exon:18674;Parent=Msa0128460-mRNA-1
chr1_3 exon 58185733 58185817 58185733 ID=Msa0128460-mRNA-1:exon:18675;Parent=Msa0128460-mRNA-1
chr1_3 exon 58186649 58186718 58186649 ID=Msa0128460-mRNA-1:exon:18676;Parent=Msa0128460-mRNA-1
chr1_3 exon 58186857 58186901 58186857 ID=Msa0128460-mRNA-1:exon:18677;Parent=Msa0128460-mRNA-1
chr1_3 exon 58187556 58187859 58187556 ID=Msa0128460-mRNA-1:exon:18678;Parent=Msa0128460-mRNA-1
chr1_3 exon 58187977 58189916 58187977 ID=Msa0128460-mRNA-1:exon:18679;Parent=Msa0128460-mRNA-1
chr1_3 exon 58190025 58190241 58190025 ID=Msa0128460-mRNA-1:exon:18680;Parent=Msa0128460-mRNA-1
chr1_3 exon 58190539 58191593 58190539 ID=Msa0128460-mRNA-1:exon:18681;Parent=Msa0128460-mRNA-1
chr1_3 five_prime_UTR 58182632 58182810 58182632 ID=Msa0128460-mRNA-1:five_prime_utr;Parent=Msa0128460-mRNA-1
chr1_3 five_prime_UTR 58182908 58182997 58182908 ID=Msa0128460-mRNA-1:five_prime_utr;Parent=Msa0128460-mRNA-1
chr1_3 five_prime_UTR 58183084 58183188 58183084 ID=Msa0128460-mRNA-1:five_prime_utr;Parent=Msa0128460-mRNA-1
chr1_3 five_prime_UTR 58185533 58185634 58185533 ID=Msa0128460-mRNA-1:five_prime_utr;Parent=Msa0128460-mRNA-1
chr1_3 five_prime_UTR 58185733 58185817 58185733 ID=Msa0128460-mRNA-1:five_prime_utr;Parent=Msa0128460-mRNA-1
chr1_3 five_prime_UTR 58186649 58186718 58186649 ID=Msa0128460-mRNA-1:five_prime_utr;Parent=Msa0128460-mRNA-1
chr1_3 five_prime_UTR 58186857 58186901 58186857 ID=Msa0128460-mRNA-1:five_prime_utr;Parent=Msa0128460-mRNA-1
chr1_3 five_prime_UTR 58187556 58187859 58187556 ID=Msa0128460-mRNA-1:five_prime_utr;Parent=Msa0128460-mRNA-1
chr1_3 five_prime_UTR 58187977 58189916 58187977 ID=Msa0128460-mRNA-1:five_prime_utr;Parent=Msa0128460-mRNA-1
chr1_3 five_prime_UTR 58190025 58190241 58190025 ID=Msa0128460-mRNA-1:five_prime_utr;Parent=Msa0128460-mRNA-1
chr1_3 five_prime_UTR 58190539 58191269 58190539 ID=Msa0128460-mRNA-1:five_prime_utr;Parent=Msa0128460-mRNA-1
chr1_3 CDS 58191270 58191593 58191270 ID=Msa0128460-mRNA-1:cds;Parent=Msa0128460-mRNA-1
Gene Sequence

>Msa0128460

ATGGATTTTAGGTCATTTACCAAACATCAAAGTAAGGCAGAAGAGATTATCGAGGAGGTCATTCCTCATGAGGGTTGCAATGATGACGATGTAGCTTGCCAAGTATGTGGATCGCGGGAAAGAGGAGATTTGATGCTGATTTGTGGTGATGAAACTGGTTCCATTGGCTGTGGAGTGGGTACCCATATCGATTGCTGCAATCCTCCGCTGACAGCTATTCCCGAGGAGGATTGGTTTTGCCCAAAATGCATTAGAATCCAAAAATGCTCAAAAAAAGTCAATAAAAGTAAAAAGGGTGCATTATCTTCATCAAAGGCCAAGTGA
Protein sequence

>Msa0128460

MDFRSFTKHQSKAEEIIEEVIPHEGCNDDDVACQVCGSRERGDLMLICGDETGSIGCGVGTHIDCCNPPLTAIPEEDWFCPKCIRIQKCSKKVNKSKKGALSSSKAK*