Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0083310 | XP_003591658.1 | 88.771 | 472 | 32 | 3 | 13 | 484 | 93 | 543 | 0.0 | 842 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0083310 | sp|Q9FKG3|PFKA4_ARATH | 71.158 | 475 | 113 | 4 | 13 | 484 | 77 | 530 | 0.0 | 678 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0083310 | G7I304 | 88.771 | 472 | 32 | 3 | 13 | 484 | 93 | 543 | 0.0 | 842 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003640 | Msa0083310 | 0.829293 | 5.580847e-55 | -8.615850e-47 |
| Msa0013050 | Msa0083310 | -0.832262 | 1.045227e-55 | -8.615850e-47 |
| Msa0032580 | Msa0083310 | 0.816720 | 4.780562e-52 | -8.615850e-47 |
| Msa0058300 | Msa0083310 | 0.848273 | 6.805999e-60 | -8.615850e-47 |
| Msa0067990 | Msa0083310 | 0.818575 | 1.824601e-52 | -8.615850e-47 |
| Msa0083310 | Msa0115270 | 0.800505 | 1.396334e-48 | -8.615850e-47 |
| Msa0083310 | Msa0129750 | 0.806709 | 7.212185e-50 | -8.615850e-47 |
| Msa0083310 | Msa0138630 | 0.810587 | 1.070458e-50 | -8.615850e-47 |
| Msa0083310 | Msa0143140 | -0.801916 | 7.182709e-49 | -8.615850e-47 |
| Msa0083310 | Msa0145730 | 0.827829 | 1.260490e-54 | -8.615850e-47 |
| Msa0083310 | Msa0160550 | 0.832040 | 1.185702e-55 | -8.615850e-47 |
| Msa0083310 | Msa0165220 | 0.805070 | 1.594031e-49 | -8.615850e-47 |
| Msa0083310 | Msa0171540 | 0.804977 | 1.666785e-49 | -8.615850e-47 |
| Msa0083310 | Msa0172970 | 0.819635 | 1.047055e-52 | -8.615850e-47 |
| Msa0083310 | Msa0197660 | 0.824209 | 9.138526e-54 | -8.615850e-47 |
| Msa0083310 | Msa0208350 | 0.813257 | 2.804350e-51 | -8.615850e-47 |
| Msa0083310 | Msa0239800 | 0.822161 | 2.746385e-53 | -8.615850e-47 |
| Msa0083310 | Msa0260030 | 0.853125 | 2.938737e-61 | -8.615850e-47 |
| Msa0083310 | Msa0277820 | 0.804218 | 2.400405e-49 | -8.615850e-47 |
| Msa0083310 | Msa0279700 | 0.801248 | 9.846568e-49 | -8.615850e-47 |
| Msa0083310 | Msa0279790 | 0.805812 | 1.114306e-49 | -8.615850e-47 |
| Msa0083310 | Msa0294560 | -0.828317 | 9.614511e-55 | -8.615850e-47 |
| Msa0083310 | Msa0306710 | 0.803458 | 3.452153e-49 | -8.615850e-47 |
| Msa0083310 | Msa0317250 | 0.803068 | 4.157819e-49 | -8.615850e-47 |
| Msa0083310 | Msa0317510 | 0.810276 | 1.249080e-50 | -8.615850e-47 |
| Msa0083310 | Msa0358170 | 0.825509 | 4.510606e-54 | -8.615850e-47 |
| Msa0083310 | Msa0372340 | 0.805320 | 1.413243e-49 | -8.615850e-47 |
| Msa0083310 | Msa0442190 | 0.820150 | 7.985893e-53 | -8.615850e-47 |
| Msa0083310 | Msa0469030 | 0.808226 | 3.437375e-50 | -8.615850e-47 |
| Msa0083310 | Msa0510350 | 0.822041 | 2.928092e-53 | -8.615850e-47 |
| Msa0083310 | Msa0621490 | 0.819642 | 1.043375e-52 | -8.615850e-47 |
| Msa0083310 | Msa0623790 | 0.802146 | 6.442050e-49 | -8.615850e-47 |
| Msa0083310 | Msa0636070 | 0.801705 | 7.935733e-49 | -8.615850e-47 |
| Msa0083310 | Msa0643560 | 0.805555 | 1.261505e-49 | -8.615850e-47 |
| Msa0083310 | Msa0661190 | -0.838855 | 2.243990e-57 | -8.615850e-47 |
| Msa0083310 | Msa0701920 | 0.800291 | 1.543887e-48 | -8.615850e-47 |
| Msa0083310 | Msa0716840 | 0.830188 | 3.380753e-55 | -8.615850e-47 |
| Msa0083310 | Msa0795090 | 0.801491 | 8.783608e-49 | -8.615850e-47 |
| Msa0083310 | Msa0812570 | 0.809796 | 1.584822e-50 | -8.615850e-47 |
| Msa0083310 | Msa0813720 | 0.802783 | 4.763096e-49 | -8.615850e-47 |
| Msa0083310 | Msa0945970 | 0.800435 | 1.443477e-48 | -8.615850e-47 |
| Msa0083310 | Msa1004900 | -0.805552 | 1.263110e-49 | -8.615850e-47 |
| Msa0083310 | Msa1012830 | 0.824319 | 8.606989e-54 | -8.615850e-47 |
| Msa0083310 | Msa1037420 | 0.837063 | 6.483838e-57 | -8.615850e-47 |
| Msa0083310 | Msa1051200 | 0.803376 | 3.591480e-49 | -8.615850e-47 |
| Msa0083310 | Msa1123810 | 0.810437 | 1.153445e-50 | -8.615850e-47 |
| Msa0083310 | Msa1136540 | 0.808260 | 3.379668e-50 | -8.615850e-47 |
| Msa0083310 | Msa1203250 | 0.801311 | 9.558657e-49 | -8.615850e-47 |
| Msa0083310 | Msa1264020 | 0.802195 | 6.294600e-49 | -8.615850e-47 |
| Msa0083310 | Msa1275360 | 0.807506 | 4.889734e-50 | -8.615850e-47 |
| Msa0083310 | Msa1291890 | 0.816268 | 6.034990e-52 | -8.615850e-47 |
| Msa0083310 | Msa1332040 | -0.833578 | 4.921141e-56 | -8.615850e-47 |
| Msa0083310 | Msa1340470 | 0.825555 | 4.397389e-54 | -8.615850e-47 |
| Msa0083310 | Msa1348490 | 0.802550 | 5.320181e-49 | -8.615850e-47 |
| Msa0083310 | Msa1385770 | 0.813681 | 2.263184e-51 | -8.615850e-47 |
| Msa0083310 | Msa1409240 | 0.814012 | 1.913074e-51 | -8.615850e-47 |
| Msa0083310 | Msa1416150 | 0.800666 | 1.294960e-48 | -8.615850e-47 |
| Msa0083310 | Msa1419800 | -0.818480 | 1.918136e-52 | -8.615850e-47 |
| Msa0083310 | Msa1426030 | 0.817117 | 3.894663e-52 | -8.615850e-47 |
| Msa0083310 | Msa1434140 | 0.815977 | 7.010966e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0083310 | MtrunA17_Chr1g0196891 | 88.771 | 472 | 32 | 3 | 13 | 484 | 93 | 543 | 0.0 | 842 |
| Msa0083310 | MtrunA17_Chr3g0140611 | 66.147 | 449 | 131 | 3 | 13 | 461 | 27 | 454 | 0.0 | 608 |
| Msa0083310 | MtrunA17_Chr6g0487421 | 61.538 | 468 | 156 | 5 | 13 | 480 | 23 | 466 | 0.0 | 580 |
| Msa0083310 | MtrunA17_Chr8g0389631 | 63.496 | 452 | 143 | 4 | 13 | 463 | 26 | 456 | 0.0 | 580 |
| Msa0083310 | MtrunA17_Chr2g0330871 | 61.771 | 463 | 153 | 7 | 13 | 474 | 26 | 465 | 0.0 | 556 |
| Msa0083310 | MtrunA17_Chr4g0076591 | 51.233 | 365 | 162 | 4 | 102 | 463 | 89 | 440 | 2.05e-127 | 377 |
| Msa0083310 | MtrunA17_Chr8g0367681 | 50.639 | 391 | 172 | 6 | 73 | 461 | 158 | 529 | 1.60e-122 | 368 |
| Msa0083310 | MtrunA17_Chr5g0412481 | 49.616 | 391 | 176 | 6 | 73 | 461 | 162 | 533 | 2.44e-120 | 362 |
| Msa0083310 | MtrunA17_Chr4g0030501 | 62.963 | 54 | 20 | 0 | 363 | 416 | 8 | 61 | 4.22e-18 | 79.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0083310 | AT5G61580.1 | 71.158 | 475 | 113 | 4 | 13 | 484 | 77 | 530 | 0.0 | 678 |
| Msa0083310 | AT5G61580.2 | 71.158 | 475 | 112 | 5 | 13 | 484 | 77 | 529 | 0.0 | 674 |
| Msa0083310 | AT4G32840.1 | 64.551 | 457 | 138 | 4 | 13 | 469 | 27 | 459 | 0.0 | 592 |
| Msa0083310 | AT4G26270.1 | 62.128 | 470 | 151 | 5 | 13 | 477 | 26 | 473 | 0.0 | 585 |
| Msa0083310 | AT5G56630.1 | 63.147 | 464 | 148 | 5 | 13 | 476 | 26 | 466 | 0.0 | 580 |
| Msa0083310 | AT4G29220.1 | 62.309 | 459 | 149 | 5 | 22 | 479 | 36 | 471 | 0.0 | 577 |
| Msa0083310 | AT5G47810.1 | 49.545 | 440 | 202 | 4 | 25 | 463 | 21 | 441 | 8.75e-150 | 435 |
| Msa0083310 | AT2G22480.1 | 50.639 | 391 | 172 | 6 | 73 | 461 | 166 | 537 | 3.82e-126 | 378 |
| Msa0083310 | AT1G20950.1 | 24.281 | 313 | 200 | 10 | 70 | 360 | 67 | 364 | 1.05e-11 | 67.8 |
Find 111 sgRNAs with CRISPR-Local
Find 391 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGATCATACCTTGATCTTAT+TGG | 0.159309 | 1_2:-62382678 | None:intergenic |
| CTCCACATGTGCAGCGTTAA+TGG | 0.178071 | 1_2:-62381899 | None:intergenic |
| GCATATTAGGTATACATTAT+TGG | 0.252898 | 1_2:+62380276 | Msa0083310:intron |
| CCTCTTCCTTCCAAATAAAA+TGG | 0.258115 | 1_2:-62382491 | None:intergenic |
| TTCATATTTACCGCCATCTT+TGG | 0.261065 | 1_2:-62383270 | None:intergenic |
| GGAGCTATGGCAGGATATTC+TGG | 0.271894 | 1_2:+62383813 | Msa0083310:CDS |
| GTGCAGCGTTAATGGCTCTT+TGG | 0.272360 | 1_2:-62381891 | None:intergenic |
| ATTTATGTACGAGCATAATT+TGG | 0.278435 | 1_2:+62384798 | Msa0083310:three_prime_UTR |
| TGGATATCGCTAACCACTTT+AGG | 0.280368 | 1_2:-62380084 | None:intergenic |
| CTTGCTCATAGTGCTGTTCA+TGG | 0.284319 | 1_2:+62383792 | Msa0083310:CDS |
| ACTTGCCAACGTTGCATTCA+TGG | 0.295629 | 1_2:-62382154 | None:intergenic |
| GAACAGAGGTTAAAAGAAAA+TGG | 0.297059 | 1_2:+62382533 | Msa0083310:CDS |
| CGTCTTCAAGTGGCTGTGGC+TGG | 0.305034 | 1_2:+62380446 | Msa0083310:CDS |
| TAGGTAATAGATAAATCTTT+TGG | 0.309642 | 1_2:+62381844 | Msa0083310:intron |
| TGCAGCGTTAATGGCTCTTT+GGG | 0.312466 | 1_2:-62381890 | None:intergenic |
| AATTGGAATTGTTAAGCTAA+TGG | 0.323932 | 1_2:+62381942 | Msa0083310:CDS |
| GGAGGTGATGGTACCCAAAA+AGG | 0.324923 | 1_2:+62380297 | Msa0083310:CDS |
| CTAATCACTGTATTAATTCC+TGG | 0.330168 | 1_2:-62378880 | None:intergenic |
| AATGAACCACTTACAGCTAT+TGG | 0.336729 | 1_2:-62383876 | None:intergenic |
| ATTGGAATTGTTAAGCTAAT+GGG | 0.336799 | 1_2:+62381943 | Msa0083310:CDS |
| TCTCCTTCTCAACTCTTTGT+TGG | 0.341144 | 1_2:-62384647 | None:intergenic |
| AGGAATTAATACAGTGATTA+GGG | 0.346264 | 1_2:+62378882 | Msa0083310:CDS |
| CAGGAATTAATACAGTGATT+AGG | 0.347485 | 1_2:+62378881 | Msa0083310:CDS |
| AATAGTGTTGAAAATGGAAT+TGG | 0.353614 | 1_2:+62381925 | Msa0083310:CDS |
| GTGATTAGGGAAATTGTATC+TGG | 0.361111 | 1_2:+62378895 | Msa0083310:CDS |
| CCCGTCAGTTGGACTGTATT+CGG | 0.366088 | 1_2:-62384567 | None:intergenic |
| TGACTGGTTTGCAGTGGGTT+TGG | 0.372043 | 1_2:-62378342 | None:intergenic |
| GATATTCTGGCTTCACAGTT+GGG | 0.387387 | 1_2:+62383826 | Msa0083310:CDS |
| GGATATTCTGGCTTCACAGT+TGG | 0.392595 | 1_2:+62383825 | Msa0083310:CDS |
| GTCTTCAAGTGGCTGTGGCT+GGG | 0.407085 | 1_2:+62380447 | Msa0083310:CDS |
| TTTCACAAAGTTTCCAAAGA+TGG | 0.407975 | 1_2:+62383257 | Msa0083310:CDS |
| TGAAGATATACTTGGGATTG+AGG | 0.413079 | 1_2:+62378939 | Msa0083310:CDS |
| ATATTACCTCTATCTAATCT+AGG | 0.434356 | 1_2:+62384694 | Msa0083310:exon |
| GAGGTTAATAGTGTTGAAAA+TGG | 0.434753 | 1_2:+62381919 | Msa0083310:CDS |
| ATGAACCACTTACAGCTATT+GGG | 0.440181 | 1_2:-62383875 | None:intergenic |
| CACAAACAAGGGAGAAGATT+GGG | 0.442961 | 1_2:-62378591 | None:intergenic |
| CTTTACAAGCTTCCATCTGC+AGG | 0.446730 | 1_2:+62382123 | Msa0083310:CDS |
| GGTAGCAGAAGGAGCTGGTC+AGG | 0.447642 | 1_2:+62382571 | Msa0083310:CDS |
| GACAATTGAATAAGCTTGAC+TGG | 0.449931 | 1_2:-62378358 | None:intergenic |
| ATGTTGTCCGAGGCATTACT+TGG | 0.475315 | 1_2:-62383756 | None:intergenic |
| GCGGTAAATATGAAATATAT+AGG | 0.476109 | 1_2:+62383279 | Msa0083310:CDS |
| AAATGGACATTTAGTTATTG+TGG | 0.476330 | 1_2:+62382550 | Msa0083310:CDS |
| ATATCATTATCAATTGTCTT+CGG | 0.483135 | 1_2:-62380473 | None:intergenic |
| AATGTTATCTACTATCTTGT+GGG | 0.483176 | 1_2:-62380154 | None:intergenic |
| GGTTTGCAGTGGGTTTGGAT+AGG | 0.485729 | 1_2:-62378337 | None:intergenic |
| TCCAACTGACGGGTAGGATG+TGG | 0.486857 | 1_2:+62384577 | Msa0083310:CDS |
| TCACAAACAAGGGAGAAGAT+TGG | 0.492055 | 1_2:-62378592 | None:intergenic |
| CAATGTTATCTACTATCTTG+TGG | 0.493256 | 1_2:-62380155 | None:intergenic |
| TATGGGGTTGAAGATATACT+TGG | 0.494374 | 1_2:+62378931 | Msa0083310:CDS |
| GCTGACGAGAAGGATGCATC+AGG | 0.494441 | 1_2:+62382620 | Msa0083310:CDS |
| GTTAGCGATATCCATAAACT+TGG | 0.494648 | 1_2:+62380093 | Msa0083310:CDS |
| TAATCACTGTATTAATTCCT+GGG | 0.495015 | 1_2:-62378879 | None:intergenic |
| TGGTCAGAGGTAACAAAACT+TGG | 0.499296 | 1_2:-62384627 | None:intergenic |
| CCGTGCTGGACCTCGAGAAA+AGG | 0.504764 | 1_2:+62378731 | Msa0083310:CDS |
| TAAGCATGTTTGCTGTTCAC+AGG | 0.504896 | 1_2:-62383849 | None:intergenic |
| CTCAACTCTTTGTTGGTCAG+AGG | 0.511192 | 1_2:-62384640 | None:intergenic |
| AGGAGCTGCACGCATTTATG+AGG | 0.518699 | 1_2:+62380317 | Msa0083310:CDS |
| CGGCGAAAATGAACTCCTCT+AGG | 0.518806 | 1_2:-62378711 | None:intergenic |
| CATTGCCATGAATGCAACGT+TGG | 0.520595 | 1_2:+62382149 | Msa0083310:CDS |
| TTAGTTATTGTGGTAGCAGA+AGG | 0.524937 | 1_2:+62382560 | Msa0083310:CDS |
| TGAGGACAGAGGAATAAATC+AGG | 0.526961 | 1_2:+62380176 | Msa0083310:CDS |
| TACTTCTTGATGTTGGTCCA+TGG | 0.528721 | 1_2:+62382651 | Msa0083310:CDS |
| TAGTGCTGTTCATGGAGCTA+TGG | 0.529500 | 1_2:+62383800 | Msa0083310:CDS |
| AACAAGCTACTTCTTGATGT+TGG | 0.530093 | 1_2:+62382644 | Msa0083310:CDS |
| GCTGTTCATGGAGCTATGGC+AGG | 0.532078 | 1_2:+62383804 | Msa0083310:CDS |
| GTATACATTATTGGAGGTGA+TGG | 0.532282 | 1_2:+62380285 | Msa0083310:CDS |
| GTTTGTGCGACCATATCTTC+CGG | 0.533344 | 1_2:-62378559 | None:intergenic |
| CATGAGATTGACACCTAAAG+TGG | 0.535638 | 1_2:+62380071 | Msa0083310:CDS |
| ACGTCGTCTTCAAGTGGCTG+TGG | 0.536283 | 1_2:+62380442 | Msa0083310:CDS |
| ATAGCTCGAATCATATATGT+AGG | 0.538257 | 1_2:-62383732 | None:intergenic |
| ATGGTTATCCAATAAGATCA+AGG | 0.539762 | 1_2:+62382670 | Msa0083310:CDS |
| ACATTTCTTCGTACATCTCG+TGG | 0.546699 | 1_2:+62380120 | Msa0083310:CDS |
| AGCCATTAACGCTGCACATG+TGG | 0.551810 | 1_2:+62381897 | Msa0083310:CDS |
| CACTTTAGGTGTCAATCTCA+TGG | 0.552110 | 1_2:-62380070 | None:intergenic |
| ATTGAACCTAGATTAGATAG+AGG | 0.553086 | 1_2:-62384700 | None:intergenic |
| TTAGCGATATCCATAAACTT+GGG | 0.561353 | 1_2:+62380094 | Msa0083310:CDS |
| AGCTATTCCAAGTAATGCCT+CGG | 0.564732 | 1_2:+62383749 | Msa0083310:CDS |
| CACAAAGTTTCCAAAGATGG+CGG | 0.564759 | 1_2:+62383260 | Msa0083310:CDS |
| AAGCTTGACTGGTTTGCAGT+GGG | 0.565605 | 1_2:-62378347 | None:intergenic |
| TGACCAACAAAGAGTTGAGA+AGG | 0.572227 | 1_2:+62384644 | Msa0083310:CDS |
| CCGAATACAGTCCAACTGAC+GGG | 0.573522 | 1_2:+62384567 | Msa0083310:CDS |
| CCCACATCCTACCCGTCAGT+TGG | 0.582635 | 1_2:-62384578 | None:intergenic |
| TTGATCTTATTGGATAACCA+TGG | 0.584300 | 1_2:-62382668 | None:intergenic |
| TAGCGATATCCATAAACTTG+GGG | 0.585309 | 1_2:+62380095 | Msa0083310:CDS |
| ACCGAATACAGTCCAACTGA+CGG | 0.592795 | 1_2:+62384566 | Msa0083310:CDS |
| ATGGGGTTGAAGATATACTT+GGG | 0.595435 | 1_2:+62378932 | Msa0083310:CDS |
| TATTAGGTATACATTATTGG+AGG | 0.596182 | 1_2:+62380279 | Msa0083310:intron |
| CAATTTATTAATACATACAG+AGG | 0.600966 | 1_2:+62384854 | Msa0083310:three_prime_UTR |
| ACTTGTGGAGGATTATGCCC+AGG | 0.602827 | 1_2:+62378862 | Msa0083310:CDS |
| ATGGCAATGAAACCTGCAGA+TGG | 0.605814 | 1_2:-62382135 | None:intergenic |
| AGTTCATACAGCTGACGAGA+AGG | 0.612570 | 1_2:+62382610 | Msa0083310:CDS |
| AACGTTGGCAAGTCGAGATG+TGG | 0.626554 | 1_2:+62382164 | Msa0083310:CDS |
| CATTAACGCTGCACATGTGG+AGG | 0.626820 | 1_2:+62381900 | Msa0083310:CDS |
| ATTGTGGTAGCAGAAGGAGC+TGG | 0.628479 | 1_2:+62382566 | Msa0083310:CDS |
| ATACAGTCCAACTGACGGGT+AGG | 0.630876 | 1_2:+62384571 | Msa0083310:CDS |
| TAAGCTTGACTGGTTTGCAG+TGG | 0.634563 | 1_2:-62378348 | None:intergenic |
| CCAACTGACGGGTAGGATGT+GGG | 0.634997 | 1_2:+62384578 | Msa0083310:CDS |
| GGATGTATATATTACTGAGG+AGG | 0.636391 | 1_2:+62377947 | Msa0083310:CDS |
| CGTGCTTGCATAGTGACTTG+TGG | 0.639705 | 1_2:+62378847 | Msa0083310:CDS |
| ACAAAGAGTTGAGAAGGAGA+TGG | 0.647600 | 1_2:+62384650 | Msa0083310:CDS |
| AGAGGATGTATATATTACTG+AGG | 0.647604 | 1_2:+62377944 | Msa0083310:CDS |
| ATGGTCGCACAAACTGTGAG+TGG | 0.652318 | 1_2:+62378568 | Msa0083310:CDS |
| AAGCTAATGGGAAGATACAG+TGG | 0.661965 | 1_2:+62381955 | Msa0083310:CDS |
| CAAGATAGTAGATAACATTG+AGG | 0.662500 | 1_2:+62380158 | Msa0083310:CDS |
| CTGACGAGAAGGATGCATCA+GGG | 0.670588 | 1_2:+62382621 | Msa0083310:CDS |
| AAATAAATCAGGATAACACA+AGG | 0.692025 | 1_2:-62384742 | None:intergenic |
| CGTGCAGTAAATGTTGTCCG+AGG | 0.692741 | 1_2:-62383766 | None:intergenic |
| GTAGATAACATTGAGGACAG+AGG | 0.702200 | 1_2:+62380165 | Msa0083310:CDS |
| GCTTGCATAGTGACTTGTGG+AGG | 0.703893 | 1_2:+62378850 | Msa0083310:CDS |
| TTTCTTCGTACATCTCGTGG+AGG | 0.711175 | 1_2:+62380123 | Msa0083310:CDS |
| AGCGATATCCATAAACTTGG+GGG | 0.758992 | 1_2:+62380096 | Msa0083310:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTAAAGAAACAAAAATTT+GGG | - | chr1_2:62378480-62378499 | None:intergenic | 10.0% |
| !! | AATTTAAAGAAACAAAAATT+TGG | - | chr1_2:62378481-62378500 | None:intergenic | 10.0% |
| !! | TGTTTAAATTATTAATAGTT+CGG | + | chr1_2:62379091-62379110 | Msa0083310:intron | 10.0% |
| !! | AAAAATATAAAAGATAAAAG+AGG | + | chr1_2:62379232-62379251 | Msa0083310:intron | 10.0% |
| !!! | AACAATAAAGATTAAAATTT+TGG | - | chr1_2:62381409-62381428 | None:intergenic | 10.0% |
| !! | TATTTGGATATATTTATTAT+TGG | - | chr1_2:62381556-62381575 | None:intergenic | 10.0% |
| !! | AAAAAAAACAAAAAAAATAC+AGG | - | chr1_2:62382006-62382025 | None:intergenic | 10.0% |
| !! | TCAATGAAAAAATATATATT+TGG | - | chr1_2:62382043-62382062 | None:intergenic | 10.0% |
| !!! | ATATATATTTTTTCATTGAA+AGG | + | chr1_2:62382044-62382063 | Msa0083310:intron | 10.0% |
| !!! | TGTATTTAATTGATTTAATT+CGG | + | chr1_2:62382359-62382378 | Msa0083310:intron | 10.0% |
| !! | ATTTGTATATTAAGAAAAAA+TGG | - | chr1_2:62383214-62383233 | None:intergenic | 10.0% |
| !!! | ATTGTTTTTTTTTGTAATTA+AGG | + | chr1_2:62384399-62384418 | Msa0083310:intron | 10.0% |
| !!! | ATTTATTTTATTTTTCTGTT+TGG | + | chr1_2:62384757-62384776 | Msa0083310:three_prime_UTR | 10.0% |
| !! | TTAATTCTTCAATTAACAAA+AGG | - | chr1_2:62379023-62379042 | None:intergenic | 15.0% |
| !!! | ATACAATATACACAATATTT+TGG | - | chr1_2:62379915-62379934 | None:intergenic | 15.0% |
| !! | AAAATATTGTGTATATTGTA+TGG | + | chr1_2:62379914-62379933 | Msa0083310:intron | 15.0% |
| !! | AAATGACAATAAAAGAAATT+GGG | - | chr1_2:62379975-62379994 | None:intergenic | 15.0% |
| !!! | TCCATTATATAGTTTTATTA+TGG | + | chr1_2:62380377-62380396 | Msa0083310:intron | 15.0% |
| !! | TCCATAATAAAACTATATAA+TGG | - | chr1_2:62380381-62380400 | None:intergenic | 15.0% |
| !!! | AACAATACTAACAATTTTTT+AGG | + | chr1_2:62380748-62380767 | Msa0083310:intron | 15.0% |
| !!! | TTTGAATCTTTTCTTATTTT+TGG | + | chr1_2:62380781-62380800 | Msa0083310:intron | 15.0% |
| !! | AATATGCAAAAAATTAATGT+AGG | + | chr1_2:62381134-62381153 | Msa0083310:intron | 15.0% |
| !!! | GAATTTTTCTTGTTTTTTTA+AGG | + | chr1_2:62382815-62382834 | Msa0083310:intron | 15.0% |
| !! | AAAACAAAATGAATTTAACA+AGG | - | chr1_2:62382849-62382868 | None:intergenic | 15.0% |
| !!! | TTTTTAATCATAAAACTTGT+GGG | + | chr1_2:62382883-62382902 | Msa0083310:intron | 15.0% |
| !! | TAACATGTTAAATTAACTAT+AGG | - | chr1_2:62383431-62383450 | None:intergenic | 15.0% |
| !!! | CTAAATAAAATATTTTCTCT+TGG | + | chr1_2:62384032-62384051 | Msa0083310:intron | 15.0% |
| !! | AAAACAAGAAAAATATAATG+AGG | - | chr1_2:62384483-62384502 | None:intergenic | 15.0% |
| !!! | TCATTATATTTTTCTTGTTT+TGG | + | chr1_2:62384482-62384501 | Msa0083310:intron | 15.0% |
| !! | ACAGAAAAATAAAATAAATC+AGG | - | chr1_2:62384756-62384775 | None:intergenic | 15.0% |
| !!! | CAGTATTTTCTTTTAACATA+TGG | + | chr1_2:62377986-62378005 | Msa0083310:intron | 20.0% |
| !!! | AGGTGAATTTTAATTGTAAA+AGG | + | chr1_2:62378035-62378054 | Msa0083310:intron | 20.0% |
| !! | TAATTGTAAAAGGATTAAGT+TGG | + | chr1_2:62378045-62378064 | Msa0083310:intron | 20.0% |
| !! | AGAAAATAATTCACAAACAA+GGG | - | chr1_2:62378605-62378624 | None:intergenic | 20.0% |
| !! | AAGAAAATAATTCACAAACA+AGG | - | chr1_2:62378606-62378625 | None:intergenic | 20.0% |
| !! | AATATATGTAAGATCAAAGA+GGG | - | chr1_2:62378648-62378667 | None:intergenic | 20.0% |
| !! | AAATATATGTAAGATCAAAG+AGG | - | chr1_2:62378649-62378668 | None:intergenic | 20.0% |
| !! | TAAGAAAATAACCAAGAAAA+TGG | + | chr1_2:62379282-62379301 | Msa0083310:intron | 20.0% |
| !! | AAGAAAATAACCAAGAAAAT+GGG | + | chr1_2:62379283-62379302 | Msa0083310:intron | 20.0% |
| !! | TTCTTATAACTTATAAGACT+TGG | - | chr1_2:62379437-62379456 | None:intergenic | 20.0% |
| !!! | ATAAGTTATAAGAACTGTTT+TGG | + | chr1_2:62379443-62379462 | Msa0083310:intron | 20.0% |
| !!! | TCTAATAGCATTTTCAAATT+TGG | + | chr1_2:62379582-62379601 | Msa0083310:intron | 20.0% |
| !!! | ATTTTCAAATTTGGATTTTG+AGG | + | chr1_2:62379591-62379610 | Msa0083310:intron | 20.0% |
| !!! | TGTTTTATCTCTAATCAATA+CGG | + | chr1_2:62379676-62379695 | Msa0083310:intron | 20.0% |
| !! | GAAATGACAATAAAAGAAAT+TGG | - | chr1_2:62379976-62379995 | None:intergenic | 20.0% |
| !!! | AAATTTGATTTGTGCATATT+AGG | + | chr1_2:62380263-62380282 | Msa0083310:intron | 20.0% |
| !! | ATATCATTATCAATTGTCTT+CGG | - | chr1_2:62380476-62380495 | None:intergenic | 20.0% |
| !!! | GATAATATATCTGATGATTT+TGG | + | chr1_2:62380681-62380700 | Msa0083310:intron | 20.0% |
| !!! | TTGTAATTGATAGTGAAAAT+AGG | + | chr1_2:62381298-62381317 | Msa0083310:intron | 20.0% |
| !!! | ATTTTTATTTCACAACATAC+AGG | + | chr1_2:62381364-62381383 | Msa0083310:intron | 20.0% |
| !!! | GATTGAATTAATGCTTATTT+TGG | + | chr1_2:62381496-62381515 | Msa0083310:intron | 20.0% |
| !! | TGGATATATTTATTATTGGA+GGG | - | chr1_2:62381552-62381571 | None:intergenic | 20.0% |
| !! | TTGGATATATTTATTATTGG+AGG | - | chr1_2:62381553-62381572 | None:intergenic | 20.0% |
| !! | AAAAAATGACATTAAAGAAC+TGG | + | chr1_2:62381619-62381638 | Msa0083310:intron | 20.0% |
| !! | AAAAATGACATTAAAGAACT+GGG | + | chr1_2:62381620-62381639 | Msa0083310:intron | 20.0% |
| !! | AAATAATATATGCACCAAAA+TGG | - | chr1_2:62381672-62381691 | None:intergenic | 20.0% |
| !!! | TAGGTAATAGATAAATCTTT+TGG | + | chr1_2:62381844-62381863 | Msa0083310:intron | 20.0% |
| !!! | ATTTTTCTGAAAAGAGAAAT+AGG | - | chr1_2:62382102-62382121 | None:intergenic | 20.0% |
| !!! | CTTTTTAATCATAAAACTTG+TGG | + | chr1_2:62382882-62382901 | Msa0083310:intron | 20.0% |
| !! | AGCAAATAAAAAAGTTAACA+TGG | - | chr1_2:62383589-62383608 | None:intergenic | 20.0% |
| !! | TGATTACTTAAACATAATCT+AGG | + | chr1_2:62383609-62383628 | Msa0083310:intron | 20.0% |
| !! | ATAATTTGAATGAAGTAAAG+AGG | - | chr1_2:62383975-62383994 | None:intergenic | 20.0% |
| !! | TTATTTAGAAAATCTAGATG+AGG | - | chr1_2:62384020-62384039 | None:intergenic | 20.0% |
| !! | CAATTTATTAATACATACAG+AGG | + | chr1_2:62384854-62384873 | Msa0083310:three_prime_UTR | 20.0% |
| ! | CAATTAAAATTCACCTCATA+TGG | - | chr1_2:62378031-62378050 | None:intergenic | 25.0% |
| ! | TTGCATAAGTTAACAAGTAA+TGG | + | chr1_2:62378093-62378112 | Msa0083310:intron | 25.0% |
| ! | TAGATATACATACATACATG+AGG | - | chr1_2:62378255-62378274 | None:intergenic | 25.0% |
| ! | AGTTAATAAGCTTCAAATCT+AGG | - | chr1_2:62378436-62378455 | None:intergenic | 25.0% |
| ! | TAATCACTGTATTAATTCCT+GGG | - | chr1_2:62378882-62378901 | None:intergenic | 25.0% |
| ! | AGGAATTAATACAGTGATTA+GGG | + | chr1_2:62378882-62378901 | Msa0083310:CDS | 25.0% |
| !! | AGTAGTTAATATGTCATTTG+CGG | + | chr1_2:62379164-62379183 | Msa0083310:intron | 25.0% |
| !!! | GTTAACTAGTTTTACAATCT+GGG | + | chr1_2:62379364-62379383 | Msa0083310:intron | 25.0% |
| ! | AAAACAAAATAGTCCTTACA+AGG | - | chr1_2:62379662-62379681 | None:intergenic | 25.0% |
| !! | GTTTTATCTCTAATCAATAC+GGG | + | chr1_2:62379677-62379696 | Msa0083310:intron | 25.0% |
| !! | TTTTATCTCTAATCAATACG+GGG | + | chr1_2:62379678-62379697 | Msa0083310:intron | 25.0% |
| ! | TTAAGAGTTATCAAGTTAGA+TGG | - | chr1_2:62379868-62379887 | None:intergenic | 25.0% |
| ! | AATGTTATCTACTATCTTGT+GGG | - | chr1_2:62380157-62380176 | None:intergenic | 25.0% |
| !!! | TCAGTAAATTTTGTCGTTTT+AGG | + | chr1_2:62380211-62380230 | Msa0083310:intron | 25.0% |
| ! | TTTAGGTGCTTAATAGATTA+TGG | + | chr1_2:62380228-62380247 | Msa0083310:intron | 25.0% |
| ! | AATAGATTATGGAAAACCAA+TGG | + | chr1_2:62380239-62380258 | Msa0083310:intron | 25.0% |
| ! | ATAGATTATGGAAAACCAAT+GGG | + | chr1_2:62380240-62380259 | Msa0083310:intron | 25.0% |
| ! | GCATATTAGGTATACATTAT+TGG | + | chr1_2:62380276-62380295 | Msa0083310:intron | 25.0% |
| ! | TATTAGGTATACATTATTGG+AGG | + | chr1_2:62380279-62380298 | Msa0083310:intron | 25.0% |
| ! | TTGATTTCTCTCACAATTTA+TGG | + | chr1_2:62380343-62380362 | Msa0083310:intron | 25.0% |
| ! | AAAACAGGATAATGATACAA+TGG | - | chr1_2:62380594-62380613 | None:intergenic | 25.0% |
| !!! | TATCCTGTTTTTATTCTTTG+TGG | + | chr1_2:62380603-62380622 | Msa0083310:intron | 25.0% |
| !!! | ATCCTGTTTTTATTCTTTGT+GGG | + | chr1_2:62380604-62380623 | Msa0083310:intron | 25.0% |
| ! | ATGTTCATGACAAACAAATT+CGG | + | chr1_2:62380635-62380654 | Msa0083310:intron | 25.0% |
| ! | TATTGTTGTCTAAGAAAATG+AGG | - | chr1_2:62380735-62380754 | None:intergenic | 25.0% |
| !!! | TCTCTAAAACATCATGTAAA+TGG | - | chr1_2:62381072-62381091 | None:intergenic | 25.0% |
| ! | AATGTAGGCTATTACTAAAA+AGG | + | chr1_2:62381149-62381168 | Msa0083310:intron | 25.0% |
| ! | ATGTAGGCTATTACTAAAAA+GGG | + | chr1_2:62381150-62381169 | Msa0083310:intron | 25.0% |
| ! | TGATTTGAAAACAAGAAGTA+AGG | + | chr1_2:62381255-62381274 | Msa0083310:intron | 25.0% |
| ! | AATTTCAGCACATTAATAAG+AGG | + | chr1_2:62381449-62381468 | Msa0083310:intron | 25.0% |
| ! | AAGATTTATCTATTACCTAG+AGG | - | chr1_2:62381843-62381862 | None:intergenic | 25.0% |
| !! | AATAGTGTTGAAAATGGAAT+TGG | + | chr1_2:62381925-62381944 | Msa0083310:CDS | 25.0% |
| ! | AATTGGAATTGTTAAGCTAA+TGG | + | chr1_2:62381942-62381961 | Msa0083310:CDS | 25.0% |
| ! | ATTGGAATTGTTAAGCTAAT+GGG | + | chr1_2:62381943-62381962 | Msa0083310:CDS | 25.0% |
| !! | TCCATAAACTGATTCTTATT+AGG | + | chr1_2:62382196-62382215 | Msa0083310:intron | 25.0% |
| ! | ACCTAATAAGAATCAGTTTA+TGG | - | chr1_2:62382200-62382219 | None:intergenic | 25.0% |
| !!! | ATTAGGTGTTTTGTTATTGA+TGG | + | chr1_2:62382213-62382232 | Msa0083310:intron | 25.0% |
| !!! | TTAGGTGTTTTGTTATTGAT+GGG | + | chr1_2:62382214-62382233 | Msa0083310:intron | 25.0% |
| ! | CTTGAAAAAATCAATAAACG+AGG | - | chr1_2:62382406-62382425 | None:intergenic | 25.0% |
| !!! | GATTTTTTCAAGAGAGAAAA+AGG | + | chr1_2:62382414-62382433 | Msa0083310:intron | 25.0% |
| !!! | TTACAACTTTTGCTATTAGT+AGG | - | chr1_2:62382444-62382463 | None:intergenic | 25.0% |
| !!! | TTTTTGAGTTTATTGAACAG+AGG | + | chr1_2:62382519-62382538 | Msa0083310:CDS | 25.0% |
| ! | AAATGGACATTTAGTTATTG+TGG | + | chr1_2:62382550-62382569 | Msa0083310:CDS | 25.0% |
| ! | ACATTATAGAACTGATCTAT+TGG | - | chr1_2:62382775-62382794 | None:intergenic | 25.0% |
| !! | TTTCATTTTCTTTGATGAGA+AGG | - | chr1_2:62382995-62383014 | None:intergenic | 25.0% |
| ! | AGAAAAAATGGACAACTTAA+AGG | - | chr1_2:62383202-62383221 | None:intergenic | 25.0% |
| ! | GCGGTAAATATGAAATATAT+AGG | + | chr1_2:62383279-62383298 | Msa0083310:CDS | 25.0% |
| ! | AAAGATAAAGCTATTGTAAG+TGG | - | chr1_2:62383367-62383386 | None:intergenic | 25.0% |
| ! | ATTGCATCTAATAGATTAGT+AGG | + | chr1_2:62383473-62383492 | Msa0083310:intron | 25.0% |
| !!! | ACAACTTTGTTGTTAATTCT+AGG | - | chr1_2:62384153-62384172 | None:intergenic | 25.0% |
| ! | TTAAAACTGTTTATCTACAG+TGG | + | chr1_2:62384441-62384460 | Msa0083310:intron | 25.0% |
| ! | ATATTACCTCTATCTAATCT+AGG | + | chr1_2:62384694-62384713 | Msa0083310:exon | 25.0% |
| ! | AAATAAATCAGGATAACACA+AGG | - | chr1_2:62384745-62384764 | None:intergenic | 25.0% |
| ! | ATTTATGTACGAGCATAATT+TGG | + | chr1_2:62384798-62384817 | Msa0083310:three_prime_UTR | 25.0% |
| !!! | TGCATTTTCAAGTCATTAAG+AGG | + | chr1_2:62377926-62377945 | Msa0083310:CDS | 30.0% |
| AGAGGATGTATATATTACTG+AGG | + | chr1_2:62377944-62377963 | Msa0083310:CDS | 30.0% | |
| TTAAAATTCACCTCATATGG+AGG | - | chr1_2:62378028-62378047 | None:intergenic | 30.0% | |
| ! | GAGTTTTTGACAAACTGTTT+TGG | + | chr1_2:62378138-62378157 | Msa0083310:intron | 30.0% |
| !!! | TGTTTTGGTCGATTTGTTAA+GGG | + | chr1_2:62378153-62378172 | Msa0083310:intron | 30.0% |
| ATTCCTTCTTCTAACCATAT+TGG | + | chr1_2:62378274-62378293 | Msa0083310:intron | 30.0% | |
| ACTATCAGAAATCACCAATA+TGG | - | chr1_2:62378291-62378310 | None:intergenic | 30.0% | |
| AGAAACAAAAATTTGGGAAC+TGG | - | chr1_2:62378474-62378493 | None:intergenic | 30.0% | |
| ! | ATAAACCGTTTTATGCTTTC+AGG | + | chr1_2:62378521-62378540 | Msa0083310:intron | 30.0% |
| ! | GTATTCCTGAAAGCATAAAA+CGG | - | chr1_2:62378529-62378548 | None:intergenic | 30.0% |
| ! | ATGTTTTATACCTTTTCTCG+AGG | - | chr1_2:62378744-62378763 | None:intergenic | 30.0% |
| ! | TCGAGAAAAGGTATAAAACA+TGG | + | chr1_2:62378743-62378762 | Msa0083310:intron | 30.0% |
| GAAGTAAACCTAATATTCGA+AGG | - | chr1_2:62378812-62378831 | None:intergenic | 30.0% | |
| CTAATCACTGTATTAATTCC+TGG | - | chr1_2:62378883-62378902 | None:intergenic | 30.0% | |
| CAGGAATTAATACAGTGATT+AGG | + | chr1_2:62378881-62378900 | Msa0083310:CDS | 30.0% | |
| AAATAACCAAGAAAATGGGA+AGG | + | chr1_2:62379287-62379306 | Msa0083310:intron | 30.0% | |
| CAACCAATTCATAACAGTAA+AGG | + | chr1_2:62379321-62379340 | Msa0083310:intron | 30.0% | |
| CAATTCATAACAGTAAAGGA+GGG | + | chr1_2:62379325-62379344 | Msa0083310:intron | 30.0% | |
| !!! | CGTTAACTAGTTTTACAATC+TGG | + | chr1_2:62379363-62379382 | Msa0083310:intron | 30.0% |
| ATGGGACTAATAATAGATCT+AGG | + | chr1_2:62379554-62379573 | Msa0083310:intron | 30.0% | |
| AGAAAAACTGTAATTCCTCA+AGG | + | chr1_2:62379733-62379752 | Msa0083310:intron | 30.0% | |
| TCCTGTCTTGAATATTATGA+CGG | + | chr1_2:62379798-62379817 | Msa0083310:intron | 30.0% | |
| TTATGAATCACCATATTCTC+TGG | + | chr1_2:62380004-62380023 | Msa0083310:intron | 30.0% | |
| TATGAATCACCATATTCTCT+GGG | + | chr1_2:62380005-62380024 | Msa0083310:intron | 30.0% | |
| !!! | CTTTTTCAGGAAGGATATAA+AGG | + | chr1_2:62380030-62380049 | Msa0083310:intron | 30.0% |
| TTAGCGATATCCATAAACTT+GGG | + | chr1_2:62380094-62380113 | Msa0083310:CDS | 30.0% | |
| CAATGTTATCTACTATCTTG+TGG | - | chr1_2:62380158-62380177 | None:intergenic | 30.0% | |
| CAAGATAGTAGATAACATTG+AGG | + | chr1_2:62380158-62380177 | Msa0083310:CDS | 30.0% | |
| ! | TTTTCAACTTCCTTCATCAA+AGG | - | chr1_2:62380422-62380441 | None:intergenic | 30.0% |
| ! | CACAAGTTTAAAACAGACAA+CGG | - | chr1_2:62380516-62380535 | None:intergenic | 30.0% |
| !!! | TCCTGTTTTTATTCTTTGTG+GGG | + | chr1_2:62380605-62380624 | Msa0083310:intron | 30.0% |
| !!! | TGATGATTTTGGTGTTGTTT+TGG | + | chr1_2:62380692-62380711 | Msa0083310:intron | 30.0% |
| !!! | TTATTTTTGGCTGCAAACTT+TGG | + | chr1_2:62380794-62380813 | Msa0083310:intron | 30.0% |
| !!! | TTGATTATTTTTACCAGACC+AGG | - | chr1_2:62380902-62380921 | None:intergenic | 30.0% |
| TGGTCTGGTAAAAATAATCA+AGG | + | chr1_2:62380901-62380920 | Msa0083310:intron | 30.0% | |
| AGATGTCATATTCTCTAAGT+AGG | - | chr1_2:62380984-62381003 | None:intergenic | 30.0% | |
| ! | TATTTTGCATGTTTACCTCT+AGG | + | chr1_2:62381825-62381844 | Msa0083310:intron | 30.0% |
| TTCATTGAAAGGACATAGAA+TGG | + | chr1_2:62382055-62382074 | Msa0083310:intron | 30.0% | |
| TCATTGAAAGGACATAGAAT+GGG | + | chr1_2:62382056-62382075 | Msa0083310:intron | 30.0% | |
| ATAGGATGCTTAAAGATCTA+AGG | - | chr1_2:62382084-62382103 | None:intergenic | 30.0% | |
| !! | GTTTGATGAACTGATTCTTT+TGG | + | chr1_2:62382241-62382260 | Msa0083310:intron | 30.0% |
| !! | GTTCTTCTGAGATTTATAGT+AGG | + | chr1_2:62382280-62382299 | Msa0083310:intron | 30.0% |
| ! | TCTGAGATTTATAGTAGGAT+TGG | + | chr1_2:62382285-62382304 | Msa0083310:intron | 30.0% |
| GAAAAAATCAATAAACGAGG+AGG | - | chr1_2:62382403-62382422 | None:intergenic | 30.0% | |
| CTAATAGCAAAAGTTGTAAC+AGG | + | chr1_2:62382445-62382464 | Msa0083310:intron | 30.0% | |
| GAACAGAGGTTAAAAGAAAA+TGG | + | chr1_2:62382533-62382552 | Msa0083310:CDS | 30.0% | |
| TTGATCTTATTGGATAACCA+TGG | - | chr1_2:62382671-62382690 | None:intergenic | 30.0% | |
| ATGGTTATCCAATAAGATCA+AGG | + | chr1_2:62382670-62382689 | Msa0083310:CDS | 30.0% | |
| ! | ATTGGTAAGTTGACTGATAA+TGG | - | chr1_2:62382757-62382776 | None:intergenic | 30.0% |
| ATAACGATACTGTCAAATAG+AGG | + | chr1_2:62383024-62383043 | Msa0083310:intron | 30.0% | |
| TTTGAAAACTGTGTAGACTT+TGG | + | chr1_2:62383065-62383084 | Msa0083310:intron | 30.0% | |
| TTTCACAAAGTTTCCAAAGA+TGG | + | chr1_2:62383257-62383276 | Msa0083310:CDS | 30.0% | |
| ATAAAGCTATTGTAAGTGGA+AGG | - | chr1_2:62383363-62383382 | None:intergenic | 30.0% | |
| ACGAAAATGTATTATCCAGT+TGG | + | chr1_2:62383398-62383417 | Msa0083310:intron | 30.0% | |
| TAACATGTTACTGAATCAGA+TGG | + | chr1_2:62383441-62383460 | Msa0083310:intron | 30.0% | |
| ATAGCTCGAATCATATATGT+AGG | - | chr1_2:62383735-62383754 | None:intergenic | 30.0% | |
| TCTCATAAAGCTTATGCATT+TGG | - | chr1_2:62384250-62384269 | None:intergenic | 30.0% | |
| AGCTGGTATAGTAAATGTTA+TGG | - | chr1_2:62384509-62384528 | None:intergenic | 30.0% | |
| ATTGAACCTAGATTAGATAG+AGG | - | chr1_2:62384703-62384722 | None:intergenic | 30.0% | |
| GGATGTATATATTACTGAGG+AGG | + | chr1_2:62377947-62377966 | Msa0083310:CDS | 35.0% | |
| ! | ACTTGTTAACTTATGCAACG+AGG | - | chr1_2:62378091-62378110 | None:intergenic | 35.0% |
| TCTATATTTGTCCTTCGATC+TGG | - | chr1_2:62378120-62378139 | None:intergenic | 35.0% | |
| !!! | CTGTTTTGGTCGATTTGTTA+AGG | + | chr1_2:62378152-62378171 | Msa0083310:intron | 35.0% |
| !!! | GTTTTGGTCGATTTGTTAAG+GGG | + | chr1_2:62378154-62378173 | Msa0083310:intron | 35.0% |
| TCACCAATATGGTTAGAAGA+AGG | - | chr1_2:62378280-62378299 | None:intergenic | 35.0% | |
| CTGCAAAAGAGGAATTCAAA+TGG | - | chr1_2:62378316-62378335 | None:intergenic | 35.0% | |
| GACAATTGAATAAGCTTGAC+TGG | - | chr1_2:62378361-62378380 | None:intergenic | 35.0% | |
| ! | CAGGAATACTTTTGTAAGTC+CGG | + | chr1_2:62378540-62378559 | Msa0083310:intron | 35.0% |
| ! | TTTTGTAAGTCCGGAAGATA+TGG | + | chr1_2:62378549-62378568 | Msa0083310:CDS | 35.0% |
| GTTCAGAAAAATAGTCCTAG+AGG | + | chr1_2:62378696-62378715 | Msa0083310:CDS | 35.0% | |
| GTGATTAGGGAAATTGTATC+TGG | + | chr1_2:62378895-62378914 | Msa0083310:CDS | 35.0% | |
| ! | TCTGGCTTGAAAAACATGTA+TGG | + | chr1_2:62378913-62378932 | Msa0083310:CDS | 35.0% |
| ! | CTGGCTTGAAAAACATGTAT+GGG | + | chr1_2:62378914-62378933 | Msa0083310:CDS | 35.0% |
| TGGCTTGAAAAACATGTATG+GGG | + | chr1_2:62378915-62378934 | Msa0083310:CDS | 35.0% | |
| TATGGGGTTGAAGATATACT+TGG | + | chr1_2:62378931-62378950 | Msa0083310:CDS | 35.0% | |
| ATGGGGTTGAAGATATACTT+GGG | + | chr1_2:62378932-62378951 | Msa0083310:CDS | 35.0% | |
| TGAAGATATACTTGGGATTG+AGG | + | chr1_2:62378939-62378958 | Msa0083310:CDS | 35.0% | |
| ! | TTCAATCCTTCCCATTTTCT+TGG | - | chr1_2:62379296-62379315 | None:intergenic | 35.0% |
| CCTCCTTTACTGTTATGAAT+TGG | - | chr1_2:62379327-62379346 | None:intergenic | 35.0% | |
| CCAATTCATAACAGTAAAGG+AGG | + | chr1_2:62379324-62379343 | Msa0083310:intron | 35.0% | |
| ! | ACTAGTTAACGAGTGTTTTG+TGG | - | chr1_2:62379354-62379373 | None:intergenic | 35.0% |
| GCTATATCTTGACTCAACAT+GGG | + | chr1_2:62379465-62379484 | Msa0083310:intron | 35.0% | |
| TTCAACCTTAAGCCATCTTT+GGG | - | chr1_2:62379628-62379647 | None:intergenic | 35.0% | |
| AAAATAGTCCTTACAAGGCT+TGG | - | chr1_2:62379657-62379676 | None:intergenic | 35.0% | |
| TCCTCAAGGTAGAAAACTAT+AGG | + | chr1_2:62379747-62379766 | Msa0083310:intron | 35.0% | |
| ! | ACCTATAGTTTTCTACCTTG+AGG | - | chr1_2:62379751-62379770 | None:intergenic | 35.0% |
| CCTGTCTTGAATATTATGAC+GGG | + | chr1_2:62379799-62379818 | Msa0083310:intron | 35.0% | |
| GAAAAAGTTCCCAGAGAATA+TGG | - | chr1_2:62380017-62380036 | None:intergenic | 35.0% | |
| !! | TATTCTCTGGGAACTTTTTC+AGG | + | chr1_2:62380017-62380036 | Msa0083310:intron | 35.0% |
| GTTAGCGATATCCATAAACT+TGG | + | chr1_2:62380093-62380112 | Msa0083310:CDS | 35.0% | |
| TAGCGATATCCATAAACTTG+GGG | + | chr1_2:62380095-62380114 | Msa0083310:CDS | 35.0% | |
| GCACAAATCAAATTTCCCAT+TGG | - | chr1_2:62380258-62380277 | None:intergenic | 35.0% | |
| GTATACATTATTGGAGGTGA+TGG | + | chr1_2:62380285-62380304 | Msa0083310:CDS | 35.0% | |
| ATATGAGCATCCTTTGATGA+AGG | + | chr1_2:62380409-62380428 | Msa0083310:intron | 35.0% | |
| !! | GTTTTAAACTTGTGCTCACA+TGG | + | chr1_2:62380522-62380541 | Msa0083310:intron | 35.0% |
| TCCCCACAAAGAATAAAAAC+AGG | - | chr1_2:62380609-62380628 | None:intergenic | 35.0% | |
| !! | TCTGGCATTTAAGGAGTATT+TGG | - | chr1_2:62381572-62381591 | None:intergenic | 35.0% |
| AAAAAGTCGTCTGGCATTTA+AGG | - | chr1_2:62381581-62381600 | None:intergenic | 35.0% | |
| ! | TTTGACATCAGTGACCATTT+TGG | + | chr1_2:62381655-62381674 | Msa0083310:intron | 35.0% |
| GTTCTGACAAACAAATGCTA+AGG | - | chr1_2:62381723-62381742 | None:intergenic | 35.0% | |
| ! | TTTTGGATTTGATACTGCTG+TGG | + | chr1_2:62381861-62381880 | Msa0083310:CDS | 35.0% |
| ! | TCCAGAGTCTCCATTTTATT+TGG | + | chr1_2:62382481-62382500 | Msa0083310:intron | 35.0% |
| TCCAAATAAAATGGAGACTC+TGG | - | chr1_2:62382485-62382504 | None:intergenic | 35.0% | |
| !! | GAGTCTCCATTTTATTTGGA+AGG | + | chr1_2:62382485-62382504 | Msa0083310:intron | 35.0% |
| CCTCTTCCTTCCAAATAAAA+TGG | - | chr1_2:62382494-62382513 | None:intergenic | 35.0% | |
| !! | CCATTTTATTTGGAAGGAAG+AGG | + | chr1_2:62382491-62382510 | Msa0083310:CDS | 35.0% |
| !! | TTTTATTTGGAAGGAAGAGG+CGG | + | chr1_2:62382494-62382513 | Msa0083310:CDS | 35.0% |
| TTAGTTATTGTGGTAGCAGA+AGG | + | chr1_2:62382560-62382579 | Msa0083310:CDS | 35.0% | |
| AACAAGCTACTTCTTGATGT+TGG | + | chr1_2:62382644-62382663 | Msa0083310:CDS | 35.0% | |
| GGATCATACCTTGATCTTAT+TGG | - | chr1_2:62382681-62382700 | None:intergenic | 35.0% | |
| TACAAGAGAAGGAAAGATGA+TGG | - | chr1_2:62382702-62382721 | None:intergenic | 35.0% | |
| AGTGTACAGAATACAAGAGA+AGG | - | chr1_2:62382713-62382732 | None:intergenic | 35.0% | |
| !! | GACTGATAATGGCATAAATG+CGG | - | chr1_2:62382746-62382765 | None:intergenic | 35.0% |
| AAAACCATACTCAGAACTTC+TGG | - | chr1_2:62383173-62383192 | None:intergenic | 35.0% | |
| AAATACAACCTCCTTGTTAC+AGG | + | chr1_2:62383230-62383249 | Msa0083310:intron | 35.0% | |
| TGTGAAATGATCCTGTAACA+AGG | - | chr1_2:62383244-62383263 | None:intergenic | 35.0% | |
| TTCATATTTACCGCCATCTT+TGG | - | chr1_2:62383273-62383292 | None:intergenic | 35.0% | |
| ACTATAGGTAGATTTCCAAC+TGG | - | chr1_2:62383416-62383435 | None:intergenic | 35.0% | |
| TGTTACTGAATCAGATGGAA+AGG | + | chr1_2:62383446-62383465 | Msa0083310:intron | 35.0% | |
| ATGAACCACTTACAGCTATT+GGG | - | chr1_2:62383878-62383897 | None:intergenic | 35.0% | |
| AATGAACCACTTACAGCTAT+TGG | - | chr1_2:62383879-62383898 | None:intergenic | 35.0% | |
| GTTGTTTGAACTACACTTTG+AGG | - | chr1_2:62383953-62383972 | None:intergenic | 35.0% | |
| GAGTATAGACTATAGTCCAA+TGG | + | chr1_2:62384119-62384138 | Msa0083310:intron | 35.0% | |
| !! | ATTCTAGGAAGCTTTTCCAT+TGG | - | chr1_2:62384138-62384157 | None:intergenic | 35.0% |
| TTAACAACAAAGTTGTGTCG+AGG | + | chr1_2:62384157-62384176 | Msa0083310:intron | 35.0% | |
| ! | GGAATAGTTTCTTGTTTACG+AGG | - | chr1_2:62384229-62384248 | None:intergenic | 35.0% |
| GAATAAGTCGTAGAGTAGTT+TGG | + | chr1_2:62384268-62384287 | Msa0083310:intron | 35.0% | |
| !! | AGGTTGTTAGAGAAGGTATT+AGG | - | chr1_2:62384327-62384346 | None:intergenic | 35.0% |
| ! | TGCTAGGTTTTTCTTCGATT+TGG | + | chr1_2:62384349-62384368 | Msa0083310:intron | 35.0% |
| !! | TTTCTTCGATTTGGCAGATT+TGG | + | chr1_2:62384358-62384377 | Msa0083310:intron | 35.0% |
| ! | TCAATTTGCTCCTCCATATG+AGG | + | chr1_2:62378015-62378034 | Msa0083310:intron | 40.0% |
| TTTGGATAGGACTGCAAAAG+AGG | - | chr1_2:62378327-62378346 | None:intergenic | 40.0% | |
| CACAAACAAGGGAGAAGATT+GGG | - | chr1_2:62378594-62378613 | None:intergenic | 40.0% | |
| TCACAAACAAGGGAGAAGAT+TGG | - | chr1_2:62378595-62378614 | None:intergenic | 40.0% | |
| CGATGATGCCTTCGAATATT+AGG | + | chr1_2:62378801-62378820 | Msa0083310:intron | 40.0% | |
| !!! | ATGCAAGCACGTACTTTTTC+TGG | - | chr1_2:62378838-62378857 | None:intergenic | 40.0% |
| GGCTATATCTTGACTCAACA+TGG | + | chr1_2:62379464-62379483 | Msa0083310:intron | 40.0% | |
| ATAGACCCAAAGATGGCTTA+AGG | + | chr1_2:62379620-62379639 | Msa0083310:intron | 40.0% | |
| CTTCAACCTTAAGCCATCTT+TGG | - | chr1_2:62379629-62379648 | None:intergenic | 40.0% | |
| ! | AAGATTGTCCAAGCCTTGTA+AGG | + | chr1_2:62379646-62379665 | Msa0083310:intron | 40.0% |
| CCCGTCATAATATTCAAGAC+AGG | - | chr1_2:62379802-62379821 | None:intergenic | 40.0% | |
| CACTTTAGGTGTCAATCTCA+TGG | - | chr1_2:62380073-62380092 | None:intergenic | 40.0% | |
| CATGAGATTGACACCTAAAG+TGG | + | chr1_2:62380071-62380090 | Msa0083310:CDS | 40.0% | |
| TGGATATCGCTAACCACTTT+AGG | - | chr1_2:62380087-62380106 | None:intergenic | 40.0% | |
| AGCGATATCCATAAACTTGG+GGG | + | chr1_2:62380096-62380115 | Msa0083310:CDS | 40.0% | |
| GAAATGTTCCCCCAAGTTTA+TGG | - | chr1_2:62380107-62380126 | None:intergenic | 40.0% | |
| ACATTTCTTCGTACATCTCG+TGG | + | chr1_2:62380120-62380139 | Msa0083310:CDS | 40.0% | |
| GTAGATAACATTGAGGACAG+AGG | + | chr1_2:62380165-62380184 | Msa0083310:CDS | 40.0% | |
| TGAGGACAGAGGAATAAATC+AGG | + | chr1_2:62380176-62380195 | Msa0083310:CDS | 40.0% | |
| TGAAAAACGTCGTCTTCAAG+TGG | + | chr1_2:62380436-62380455 | Msa0083310:CDS | 40.0% | |
| !!! | TTTTTGGCTGCAAACTTTGG+TGG | + | chr1_2:62380797-62380816 | Msa0083310:intron | 40.0% |
| TACCGTTTGTGCTCATAGAT+AGG | + | chr1_2:62380833-62380852 | Msa0083310:intron | 40.0% | |
| ACCGTTTGTGCTCATAGATA+GGG | + | chr1_2:62380834-62380853 | Msa0083310:intron | 40.0% | |
| CCTAAAAATAAGCCTTCGAC+AGG | - | chr1_2:62380936-62380955 | None:intergenic | 40.0% | |
| !! | CCTGTCGAAGGCTTATTTTT+AGG | + | chr1_2:62380933-62380952 | Msa0083310:intron | 40.0% |
| TATTCTCTAAGTAGGCTAGC+AGG | - | chr1_2:62380976-62380995 | None:intergenic | 40.0% | |
| CGATTCTTCAAAAAGTCGTC+TGG | - | chr1_2:62381590-62381609 | None:intergenic | 40.0% | |
| AAGCTAATGGGAAGATACAG+TGG | + | chr1_2:62381955-62381974 | Msa0083310:CDS | 40.0% | |
| !!! | GGTGTTTTGTTATTGATGGG+TGG | + | chr1_2:62382217-62382236 | Msa0083310:intron | 40.0% |
| TACTTCTTGATGTTGGTCCA+TGG | + | chr1_2:62382651-62382670 | Msa0083310:CDS | 40.0% | |
| TGTGGGATATTACTTTGCGA+TGG | + | chr1_2:62382900-62382919 | Msa0083310:intron | 40.0% | |
| GTGGGATATTACTTTGCGAT+GGG | + | chr1_2:62382901-62382920 | Msa0083310:intron | 40.0% | |
| CTTTGACTGAGCGCTATATT+TGG | + | chr1_2:62383094-62383113 | Msa0083310:intron | 40.0% | |
| !! | TTCTCCAGAAGTTCTGAGTA+TGG | + | chr1_2:62383166-62383185 | Msa0083310:intron | 40.0% |
| GAAATGATCCTGTAACAAGG+AGG | - | chr1_2:62383241-62383260 | None:intergenic | 40.0% | |
| CACAAAGTTTCCAAAGATGG+CGG | + | chr1_2:62383260-62383279 | Msa0083310:CDS | 40.0% | |
| AGCTATTCCAAGTAATGCCT+CGG | + | chr1_2:62383749-62383768 | Msa0083310:CDS | 40.0% | |
| !! | GATATTCTGGCTTCACAGTT+GGG | + | chr1_2:62383826-62383845 | Msa0083310:CDS | 40.0% |
| !! | TAAGCATGTTTGCTGTTCAC+AGG | - | chr1_2:62383852-62383871 | None:intergenic | 40.0% |
| TATCTCCCAATAGCTGTAAG+TGG | + | chr1_2:62383870-62383889 | Msa0083310:intron | 40.0% | |
| GTTGTGTCGAGGATATGAAA+TGG | + | chr1_2:62384168-62384187 | Msa0083310:intron | 40.0% | |
| ! | TTTCTTGTTTACGAGGATGC+TGG | - | chr1_2:62384222-62384241 | None:intergenic | 40.0% |
| TAGCAGAAGGTTGTTAGAGA+AGG | - | chr1_2:62384334-62384353 | None:intergenic | 40.0% | |
| TTCTCTAACAACCTTCTGCT+AGG | + | chr1_2:62384333-62384352 | Msa0083310:intron | 40.0% | |
| TCGAAGAAAAACCTAGCAGA+AGG | - | chr1_2:62384347-62384366 | None:intergenic | 40.0% | |
| ! | CAAGATGTTTTGTGATCAGC+TGG | - | chr1_2:62384526-62384545 | None:intergenic | 40.0% |
| TGGTCAGAGGTAACAAAACT+TGG | - | chr1_2:62384630-62384649 | None:intergenic | 40.0% | |
| TGACCAACAAAGAGTTGAGA+AGG | + | chr1_2:62384644-62384663 | Msa0083310:CDS | 40.0% | |
| TCTCCTTCTCAACTCTTTGT+TGG | - | chr1_2:62384650-62384669 | None:intergenic | 40.0% | |
| ACAAAGAGTTGAGAAGGAGA+TGG | + | chr1_2:62384650-62384669 | Msa0083310:CDS | 40.0% | |
| !! | CAAGTAATGGACCAGATCGA+AGG | + | chr1_2:62378106-62378125 | Msa0083310:intron | 45.0% |
| !! | GGTCGATTTGTTAAGGGGTT+CGG | + | chr1_2:62378159-62378178 | Msa0083310:intron | 45.0% |
| !! | AAGCTTGACTGGTTTGCAGT+GGG | - | chr1_2:62378350-62378369 | None:intergenic | 45.0% |
| !! | TAAGCTTGACTGGTTTGCAG+TGG | - | chr1_2:62378351-62378370 | None:intergenic | 45.0% |
| GTTTGTGCGACCATATCTTC+CGG | - | chr1_2:62378562-62378581 | None:intergenic | 45.0% | |
| GTCGCTTAAGCTAGCAATCT+GGG | - | chr1_2:62379405-62379424 | None:intergenic | 45.0% | |
| TTGACTCAACATGGGATCTC+AGG | + | chr1_2:62379473-62379492 | Msa0083310:intron | 45.0% | |
| CATCTCTTCACGCTCAAGAT+TGG | + | chr1_2:62379504-62379523 | Msa0083310:intron | 45.0% | |
| ! | AAGATTGGTCATCTAGAGCG+TGG | + | chr1_2:62379519-62379538 | Msa0083310:intron | 45.0% |
| ! | TCTAGAGCGTGGACTGATAT+AGG | + | chr1_2:62379530-62379549 | Msa0083310:intron | 45.0% |
| GCTGACTATAGACCCAAAGA+TGG | + | chr1_2:62379613-62379632 | Msa0083310:intron | 45.0% | |
| TGACGGGAACATTGAGAAGA+AGG | + | chr1_2:62379815-62379834 | Msa0083310:intron | 45.0% | |
| GGGAACATTGAGAAGAAGGT+TGG | + | chr1_2:62379819-62379838 | Msa0083310:intron | 45.0% | |
| AAATTGGGAAACAGCGCTCA+CGG | - | chr1_2:62379960-62379979 | None:intergenic | 45.0% | |
| !!! | CTCTGGGAACTTTTTCAGGA+AGG | + | chr1_2:62380021-62380040 | Msa0083310:intron | 45.0% |
| TTTCTTCGTACATCTCGTGG+AGG | + | chr1_2:62380123-62380142 | Msa0083310:CDS | 45.0% | |
| GGACAGAGGAATAAATCAGG+TGG | + | chr1_2:62380179-62380198 | Msa0083310:intron | 45.0% | |
| ! | AATGCGTGCAGCTCCTTTTT+GGG | - | chr1_2:62380313-62380332 | None:intergenic | 45.0% |
| ! | AAATGCGTGCAGCTCCTTTT+TGG | - | chr1_2:62380314-62380333 | None:intergenic | 45.0% |
| CCCCTATCTATGAGCACAAA+CGG | - | chr1_2:62380838-62380857 | None:intergenic | 45.0% | |
| CCGTTTGTGCTCATAGATAG+GGG | + | chr1_2:62380835-62380854 | Msa0083310:intron | 45.0% | |
| TTTGTGCTCATAGATAGGGG+TGG | + | chr1_2:62380838-62380857 | Msa0083310:intron | 45.0% | |
| TTGTGCTCATAGATAGGGGT+GGG | + | chr1_2:62380839-62380858 | Msa0083310:intron | 45.0% | |
| TCATAGATAGGGGTGGGAAT+AGG | + | chr1_2:62380845-62380864 | Msa0083310:intron | 45.0% | |
| AAGCCTTGCAAAGTCTAACC+CGG | - | chr1_2:62380876-62380895 | None:intergenic | 45.0% | |
| !!! | CTTATTTTTAGGCTCGAGCC+TGG | + | chr1_2:62380944-62380963 | Msa0083310:intron | 45.0% |
| !! | CAGGAGCATCTTCACACAAA+TGG | + | chr1_2:62381383-62381402 | Msa0083310:intron | 45.0% |
| TGCAGCGTTAATGGCTCTTT+GGG | - | chr1_2:62381893-62381912 | None:intergenic | 45.0% | |
| CTTTACAAGCTTCCATCTGC+AGG | + | chr1_2:62382123-62382142 | Msa0083310:CDS | 45.0% | |
| ATGGCAATGAAACCTGCAGA+TGG | - | chr1_2:62382138-62382157 | None:intergenic | 45.0% | |
| CATTGCCATGAATGCAACGT+TGG | + | chr1_2:62382149-62382168 | Msa0083310:CDS | 45.0% | |
| ACTTGCCAACGTTGCATTCA+TGG | - | chr1_2:62382157-62382176 | None:intergenic | 45.0% | |
| ! | AATAAACGAGGAGGTGCAAG+AGG | - | chr1_2:62382394-62382413 | None:intergenic | 45.0% |
| AGTTCATACAGCTGACGAGA+AGG | + | chr1_2:62382610-62382629 | Msa0083310:CDS | 45.0% | |
| CGATGGGAAATTTACTGACG+TGG | + | chr1_2:62382917-62382936 | Msa0083310:intron | 45.0% | |
| GTGGAAGGCTACAGTCATTT+CGG | - | chr1_2:62383348-62383367 | None:intergenic | 45.0% | |
| ! | ATGTTGTCCGAGGCATTACT+TGG | - | chr1_2:62383759-62383778 | None:intergenic | 45.0% |
| ! | CTTGCTCATAGTGCTGTTCA+TGG | + | chr1_2:62383792-62383811 | Msa0083310:CDS | 45.0% |
| ! | TAGTGCTGTTCATGGAGCTA+TGG | + | chr1_2:62383800-62383819 | Msa0083310:CDS | 45.0% |
| !! | GGATATTCTGGCTTCACAGT+TGG | + | chr1_2:62383825-62383844 | Msa0083310:CDS | 45.0% |
| ACCGAATACAGTCCAACTGA+CGG | + | chr1_2:62384566-62384585 | Msa0083310:CDS | 45.0% | |
| CTCAACTCTTTGTTGGTCAG+AGG | - | chr1_2:62384643-62384662 | None:intergenic | 45.0% | |
| !! | AAAAAAAAATAAAAATTGAA+TGG | - | chr1_2:62379050-62379069 | None:intergenic | 5.0% |
| !! | TAAAATCTAATATATAATAA+TGG | + | chr1_2:62381201-62381220 | Msa0083310:intron | 5.0% |
| !! | TTATAAATATAAATAAAACA+TGG | + | chr1_2:62381780-62381799 | Msa0083310:intron | 5.0% |
| ! | GGTTTGCAGTGGGTTTGGAT+AGG | - | chr1_2:62378340-62378359 | None:intergenic | 50.0% |
| !! | TGACTGGTTTGCAGTGGGTT+TGG | - | chr1_2:62378345-62378364 | None:intergenic | 50.0% |
| ATGGTCGCACAAACTGTGAG+TGG | + | chr1_2:62378568-62378587 | Msa0083310:CDS | 50.0% | |
| CGGCGAAAATGAACTCCTCT+AGG | - | chr1_2:62378714-62378733 | None:intergenic | 50.0% | |
| CGTGCTTGCATAGTGACTTG+TGG | + | chr1_2:62378847-62378866 | Msa0083310:CDS | 50.0% | |
| ! | GCTTGCATAGTGACTTGTGG+AGG | + | chr1_2:62378850-62378869 | Msa0083310:CDS | 50.0% |
| ACTTGTGGAGGATTATGCCC+AGG | + | chr1_2:62378862-62378881 | Msa0083310:CDS | 50.0% | |
| CGTCGCTTAAGCTAGCAATC+TGG | - | chr1_2:62379406-62379425 | None:intergenic | 50.0% | |
| ! | GATTGCTAGCTTAAGCGACG+AGG | + | chr1_2:62379406-62379425 | Msa0083310:intron | 50.0% |
| ! | AGCGTGGACTGATATAGGCA+TGG | + | chr1_2:62379535-62379554 | Msa0083310:intron | 50.0% |
| ! | GCGTGGACTGATATAGGCAT+GGG | + | chr1_2:62379536-62379555 | Msa0083310:intron | 50.0% |
| ! | GGAGGTGATGGTACCCAAAA+AGG | + | chr1_2:62380297-62380316 | Msa0083310:CDS | 50.0% |
| AGGAGCTGCACGCATTTATG+AGG | + | chr1_2:62380317-62380336 | Msa0083310:CDS | 50.0% | |
| GACTTTGCAAGGCTTAAGCC+TGG | + | chr1_2:62380881-62380900 | Msa0083310:intron | 50.0% | |
| AAGCCTTCGACAGGTAACAG+AGG | - | chr1_2:62380927-62380946 | None:intergenic | 50.0% | |
| GTGCAGCGTTAATGGCTCTT+TGG | - | chr1_2:62381894-62381913 | None:intergenic | 50.0% | |
| AGCCATTAACGCTGCACATG+TGG | + | chr1_2:62381897-62381916 | Msa0083310:CDS | 50.0% | |
| CTCCACATGTGCAGCGTTAA+TGG | - | chr1_2:62381902-62381921 | None:intergenic | 50.0% | |
| CATTAACGCTGCACATGTGG+AGG | + | chr1_2:62381900-62381919 | Msa0083310:CDS | 50.0% | |
| AACGTTGGCAAGTCGAGATG+TGG | + | chr1_2:62382164-62382183 | Msa0083310:CDS | 50.0% | |
| ATTGTGGTAGCAGAAGGAGC+TGG | + | chr1_2:62382566-62382585 | Msa0083310:CDS | 50.0% | |
| CTGACGAGAAGGATGCATCA+GGG | + | chr1_2:62382621-62382640 | Msa0083310:CDS | 50.0% | |
| CGTGCAGTAAATGTTGTCCG+AGG | - | chr1_2:62383769-62383788 | None:intergenic | 50.0% | |
| GGAGCTATGGCAGGATATTC+TGG | + | chr1_2:62383813-62383832 | Msa0083310:CDS | 50.0% | |
| CCCGTCAGTTGGACTGTATT+CGG | - | chr1_2:62384570-62384589 | None:intergenic | 50.0% | |
| CCGAATACAGTCCAACTGAC+GGG | + | chr1_2:62384567-62384586 | Msa0083310:CDS | 50.0% | |
| ! | ATACAGTCCAACTGACGGGT+AGG | + | chr1_2:62384571-62384590 | Msa0083310:CDS | 50.0% |
| ! | GGAGTTCATTTTCGCCGTGC+TGG | + | chr1_2:62378717-62378736 | Msa0083310:CDS | 55.0% |
| ! | CCTTTTCTCGAGGTCCAGCA+CGG | - | chr1_2:62378734-62378753 | None:intergenic | 55.0% |
| ACGTCGTCTTCAAGTGGCTG+TGG | + | chr1_2:62380442-62380461 | Msa0083310:CDS | 55.0% | |
| GTCTTCAAGTGGCTGTGGCT+GGG | + | chr1_2:62380447-62380466 | Msa0083310:CDS | 55.0% | |
| ! | GAGCCGGGTTAGACTTTGCA+AGG | + | chr1_2:62380870-62380889 | Msa0083310:intron | 55.0% |
| TGCAAGGCTTAAGCCTGGTC+TGG | + | chr1_2:62380886-62380905 | Msa0083310:intron | 55.0% | |
| AGGCCTCTGTTACCTGTCGA+AGG | + | chr1_2:62380921-62380940 | Msa0083310:intron | 55.0% | |
| CTAAGTAGGCTAGCAGGCCA+AGG | - | chr1_2:62380970-62380989 | None:intergenic | 55.0% | |
| GCTGACGAGAAGGATGCATC+AGG | + | chr1_2:62382620-62382639 | Msa0083310:CDS | 55.0% | |
| GCTGTTCATGGAGCTATGGC+AGG | + | chr1_2:62383804-62383823 | Msa0083310:CDS | 55.0% | |
| ! | TCCAACTGACGGGTAGGATG+TGG | + | chr1_2:62384577-62384596 | Msa0083310:CDS | 55.0% |
| ! | CCAACTGACGGGTAGGATGT+GGG | + | chr1_2:62384578-62384597 | Msa0083310:CDS | 55.0% |
| CCGTGCTGGACCTCGAGAAA+AGG | + | chr1_2:62378731-62378750 | Msa0083310:CDS | 60.0% | |
| CGTCTTCAAGTGGCTGTGGC+TGG | + | chr1_2:62380446-62380465 | Msa0083310:CDS | 60.0% | |
| TTTAGGCTCGAGCCTGGCCT+TGG | + | chr1_2:62380950-62380969 | Msa0083310:intron | 60.0% | |
| GGTAGCAGAAGGAGCTGGTC+AGG | + | chr1_2:62382571-62382590 | Msa0083310:CDS | 60.0% | |
| CCCACATCCTACCCGTCAGT+TGG | - | chr1_2:62384581-62384600 | None:intergenic | 60.0% | |
| GGGAAACAGCGCTCACGGAC+TGG | - | chr1_2:62379955-62379974 | None:intergenic | 65.0% | |
| GGGGTGGGAATAGGCTGAGC+CGG | + | chr1_2:62380854-62380873 | Msa0083310:intron | 65.0% | |
| GGGTGGGAATAGGCTGAGCC+GGG | + | chr1_2:62380855-62380874 | Msa0083310:intron | 65.0% | |
| TAGGCTAGCAGGCCAAGGCC+AGG | - | chr1_2:62380965-62380984 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 62377925 | 62384889 | 62377925 | ID=Msa0083310;Name=Msa0083310 |
| chr1_2 | mRNA | 62377925 | 62384889 | 62377925 | ID=Msa0083310-mRNA-1;Parent=Msa0083310;Name=Msa0083310-mRNA-1;_AED=0.15;_eAED=0.15;_QI=0|0.69|0.71|0.92|1|1|14|179|484 |
| chr1_2 | exon | 62377925 | 62377987 | 62377925 | ID=Msa0083310-mRNA-1:exon:20735;Parent=Msa0083310-mRNA-1 |
| chr1_2 | exon | 62378336 | 62378382 | 62378336 | ID=Msa0083310-mRNA-1:exon:20736;Parent=Msa0083310-mRNA-1 |
| chr1_2 | exon | 62378543 | 62378606 | 62378543 | ID=Msa0083310-mRNA-1:exon:20737;Parent=Msa0083310-mRNA-1 |
| chr1_2 | exon | 62378690 | 62378752 | 62378690 | ID=Msa0083310-mRNA-1:exon:20738;Parent=Msa0083310-mRNA-1 |
| chr1_2 | exon | 62378823 | 62378960 | 62378823 | ID=Msa0083310-mRNA-1:exon:20739;Parent=Msa0083310-mRNA-1 |
| chr1_2 | exon | 62380039 | 62380197 | 62380039 | ID=Msa0083310-mRNA-1:exon:20740;Parent=Msa0083310-mRNA-1 |
| chr1_2 | exon | 62380285 | 62380338 | 62380285 | ID=Msa0083310-mRNA-1:exon:20741;Parent=Msa0083310-mRNA-1 |
| chr1_2 | exon | 62380431 | 62380499 | 62380431 | ID=Msa0083310-mRNA-1:exon:20742;Parent=Msa0083310-mRNA-1 |
| chr1_2 | exon | 62381847 | 62382005 | 62381847 | ID=Msa0083310-mRNA-1:exon:20743;Parent=Msa0083310-mRNA-1 |
| chr1_2 | exon | 62382116 | 62382185 | 62382116 | ID=Msa0083310-mRNA-1:exon:20744;Parent=Msa0083310-mRNA-1 |
| chr1_2 | exon | 62382486 | 62382691 | 62382486 | ID=Msa0083310-mRNA-1:exon:20745;Parent=Msa0083310-mRNA-1 |
| chr1_2 | exon | 62383252 | 62383300 | 62383252 | ID=Msa0083310-mRNA-1:exon:20746;Parent=Msa0083310-mRNA-1 |
| chr1_2 | exon | 62383730 | 62383884 | 62383730 | ID=Msa0083310-mRNA-1:exon:20747;Parent=Msa0083310-mRNA-1 |
| chr1_2 | exon | 62384552 | 62384889 | 62384552 | ID=Msa0083310-mRNA-1:exon:20748;Parent=Msa0083310-mRNA-1 |
| chr1_2 | CDS | 62377925 | 62377987 | 62377925 | ID=Msa0083310-mRNA-1:cds;Parent=Msa0083310-mRNA-1 |
| chr1_2 | CDS | 62378336 | 62378382 | 62378336 | ID=Msa0083310-mRNA-1:cds;Parent=Msa0083310-mRNA-1 |
| chr1_2 | CDS | 62378543 | 62378606 | 62378543 | ID=Msa0083310-mRNA-1:cds;Parent=Msa0083310-mRNA-1 |
| chr1_2 | CDS | 62378690 | 62378752 | 62378690 | ID=Msa0083310-mRNA-1:cds;Parent=Msa0083310-mRNA-1 |
| chr1_2 | CDS | 62378823 | 62378960 | 62378823 | ID=Msa0083310-mRNA-1:cds;Parent=Msa0083310-mRNA-1 |
| chr1_2 | CDS | 62380039 | 62380197 | 62380039 | ID=Msa0083310-mRNA-1:cds;Parent=Msa0083310-mRNA-1 |
| chr1_2 | CDS | 62380285 | 62380338 | 62380285 | ID=Msa0083310-mRNA-1:cds;Parent=Msa0083310-mRNA-1 |
| chr1_2 | CDS | 62380431 | 62380499 | 62380431 | ID=Msa0083310-mRNA-1:cds;Parent=Msa0083310-mRNA-1 |
| chr1_2 | CDS | 62381847 | 62382005 | 62381847 | ID=Msa0083310-mRNA-1:cds;Parent=Msa0083310-mRNA-1 |
| chr1_2 | CDS | 62382116 | 62382185 | 62382116 | ID=Msa0083310-mRNA-1:cds;Parent=Msa0083310-mRNA-1 |
| chr1_2 | CDS | 62382486 | 62382691 | 62382486 | ID=Msa0083310-mRNA-1:cds;Parent=Msa0083310-mRNA-1 |
| chr1_2 | CDS | 62383252 | 62383300 | 62383252 | ID=Msa0083310-mRNA-1:cds;Parent=Msa0083310-mRNA-1 |
| chr1_2 | CDS | 62383730 | 62383884 | 62383730 | ID=Msa0083310-mRNA-1:cds;Parent=Msa0083310-mRNA-1 |
| chr1_2 | CDS | 62384552 | 62384710 | 62384552 | ID=Msa0083310-mRNA-1:cds;Parent=Msa0083310-mRNA-1 |
| chr1_2 | three_prime_UTR | 62384711 | 62384889 | 62384711 | ID=Msa0083310-mRNA-1:three_prime_utr;Parent=Msa0083310-mRNA-1 |
| Gene Sequence |
| Protein sequence |
