Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1291890 | AET03256.1 | 89.922 | 387 | 38 | 1 | 1 | 387 | 65 | 450 | 0.0 | 707 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1291890 | sp|Q9FWZ1|FBL13_ARATH | 23.981 | 417 | 270 | 11 | 2 | 379 | 3 | 411 | 1.02e-19 | 94.0 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1291890 | G7LH07 | 89.922 | 387 | 38 | 1 | 1 | 387 | 65 | 450 | 0.0 | 707 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0012080 | Msa1291890 | 0.815787 | 7.730834e-52 | -8.615850e-47 |
| Msa0013050 | Msa1291890 | -0.813946 | 1.978776e-51 | -8.615850e-47 |
| Msa0017510 | Msa1291890 | 0.815653 | 8.278320e-52 | -8.615850e-47 |
| Msa0027230 | Msa1291890 | 0.810256 | 1.261598e-50 | -8.615850e-47 |
| Msa0063890 | Msa1291890 | 0.814146 | 1.787367e-51 | -8.615850e-47 |
| Msa0078900 | Msa1291890 | 0.804116 | 2.521064e-49 | -8.615850e-47 |
| Msa0083310 | Msa1291890 | 0.816268 | 6.034990e-52 | -8.615850e-47 |
| Msa0101440 | Msa1291890 | 0.812908 | 3.345935e-51 | -8.615850e-47 |
| Msa0110970 | Msa1291890 | 0.805636 | 1.212942e-49 | -8.615850e-47 |
| Msa0610430 | Msa1291890 | 0.820179 | 7.864619e-53 | -8.615850e-47 |
| Msa0621490 | Msa1291890 | 0.804124 | 2.510917e-49 | -8.615850e-47 |
| Msa0636070 | Msa1291890 | 0.808773 | 2.626395e-50 | -8.615850e-47 |
| Msa0661190 | Msa1291890 | -0.802157 | 6.410208e-49 | -8.615850e-47 |
| Msa0675410 | Msa1291890 | 0.805979 | 1.027510e-49 | -8.615850e-47 |
| Msa0688960 | Msa1291890 | 0.808750 | 2.657066e-50 | -8.615850e-47 |
| Msa0689010 | Msa1291890 | 0.800625 | 1.320036e-48 | -8.615850e-47 |
| Msa0691380 | Msa1291890 | 0.802340 | 5.876930e-49 | -8.615850e-47 |
| Msa0698920 | Msa1291890 | 0.803509 | 3.370144e-49 | -8.615850e-47 |
| Msa0743720 | Msa1291890 | 0.813928 | 1.996635e-51 | -8.615850e-47 |
| Msa0743950 | Msa1291890 | 0.802906 | 4.491434e-49 | -8.615850e-47 |
| Msa0793800 | Msa1291890 | 0.801016 | 1.098624e-48 | -8.615850e-47 |
| Msa0813740 | Msa1291890 | 0.815147 | 1.072828e-51 | -8.615850e-47 |
| Msa0824680 | Msa1291890 | 0.814667 | 1.371286e-51 | -8.615850e-47 |
| Msa0126610 | Msa1291890 | 0.803791 | 2.945364e-49 | -8.615850e-47 |
| Msa0135380 | Msa1291890 | 0.801254 | 9.820744e-49 | -8.615850e-47 |
| Msa0136070 | Msa1291890 | 0.803224 | 3.860049e-49 | -8.615850e-47 |
| Msa0150820 | Msa1291890 | 0.803735 | 3.025031e-49 | -8.615850e-47 |
| Msa0157290 | Msa1291890 | 0.815574 | 8.622129e-52 | -8.615850e-47 |
| Msa0160550 | Msa1291890 | 0.842251 | 2.898988e-58 | -8.615850e-47 |
| Msa0171540 | Msa1291890 | 0.806187 | 9.290679e-50 | -8.615850e-47 |
| Msa0193120 | Msa1291890 | 0.826134 | 3.205468e-54 | -8.615850e-47 |
| Msa1225700 | Msa1291890 | 0.800839 | 1.194046e-48 | -8.615850e-47 |
| Msa1283840 | Msa1291890 | 0.806471 | 8.094225e-50 | -8.615850e-47 |
| Msa1284260 | Msa1291890 | 0.814520 | 1.477933e-51 | -8.615850e-47 |
| Msa1287460 | Msa1291890 | 0.802654 | 5.063511e-49 | -8.615850e-47 |
| Msa1291890 | Msa1306860 | 0.803903 | 2.791309e-49 | -8.615850e-47 |
| Msa1291890 | Msa1327050 | 0.807969 | 3.898741e-50 | -8.615850e-47 |
| Msa1291890 | Msa1353330 | 0.807109 | 5.934369e-50 | -8.615850e-47 |
| Msa1291890 | Msa1387870 | 0.819568 | 1.084854e-52 | -8.615850e-47 |
| Msa1291890 | Msa1417870 | 0.802464 | 5.540683e-49 | -8.615850e-47 |
| Msa1291890 | Msa1419370 | 0.809538 | 1.801039e-50 | -8.615850e-47 |
| Msa0423040 | Msa1291890 | 0.802378 | 5.772553e-49 | -8.615850e-47 |
| Msa0993290 | Msa1291890 | 0.825051 | 5.785822e-54 | -8.615850e-47 |
| Msa0993600 | Msa1291890 | 0.822465 | 2.334390e-53 | -8.615850e-47 |
| Msa0999970 | Msa1291890 | 0.809593 | 1.752744e-50 | -8.615850e-47 |
| Msa1003620 | Msa1291890 | 0.816402 | 5.633565e-52 | -8.615850e-47 |
| Msa1014540 | Msa1291890 | 0.805462 | 1.319742e-49 | -8.615850e-47 |
| Msa1046460 | Msa1291890 | 0.808236 | 3.420811e-50 | -8.615850e-47 |
| Msa1075540 | Msa1291890 | 0.800459 | 1.426949e-48 | -8.615850e-47 |
| Msa0272690 | Msa1291890 | 0.816804 | 4.579061e-52 | -8.615850e-47 |
| Msa0279700 | Msa1291890 | 0.831275 | 1.830814e-55 | -8.615850e-47 |
| Msa0279790 | Msa1291890 | 0.815886 | 7.345566e-52 | -8.615850e-47 |
| Msa0299870 | Msa1291890 | 0.803265 | 3.786191e-49 | -8.615850e-47 |
| Msa0317250 | Msa1291890 | 0.800667 | 1.294092e-48 | -8.615850e-47 |
| Msa0337620 | Msa1291890 | 0.810236 | 1.274557e-50 | -8.615850e-47 |
| Msa0358170 | Msa1291890 | 0.808916 | 2.448509e-50 | -8.615850e-47 |
| Msa1186950 | Msa1291890 | -0.812084 | 5.064829e-51 | -8.615850e-47 |
| Msa1203250 | Msa1291890 | 0.803908 | 2.785335e-49 | -8.615850e-47 |
| Msa0504020 | Msa1291890 | 0.808670 | 2.762745e-50 | -8.615850e-47 |
| Msa0541360 | Msa1291890 | 0.808328 | 3.268658e-50 | -8.615850e-47 |
| Msa0585300 | Msa1291890 | 0.823142 | 1.624322e-53 | -8.615850e-47 |
| Msa0864250 | Msa1291890 | 0.806897 | 6.580292e-50 | -8.615850e-47 |
| Msa0878500 | Msa1291890 | 0.808735 | 2.675990e-50 | -8.615850e-47 |
| Msa0880140 | Msa1291890 | 0.816539 | 5.249103e-52 | -8.615850e-47 |
| Msa0938220 | Msa1291890 | 0.801022 | 1.095196e-48 | -8.615850e-47 |
| Msa0944190 | Msa1291890 | 0.809829 | 1.559658e-50 | -8.615850e-47 |
| Msa0947660 | Msa1291890 | 0.810071 | 1.383414e-50 | -8.615850e-47 |
| Msa0959360 | Msa1291890 | 0.800132 | 1.663478e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1291890 | MtrunA17_Chr8g0366411 | 89.922 | 387 | 38 | 1 | 1 | 387 | 65 | 450 | 0.0 | 707 |
| Msa1291890 | MtrunA17_Chr4g0049031 | 50.773 | 388 | 180 | 3 | 3 | 388 | 15 | 393 | 8.05e-113 | 338 |
| Msa1291890 | MtrunA17_Chr3g0085961 | 48.855 | 393 | 187 | 5 | 1 | 388 | 1 | 384 | 5.87e-112 | 332 |
| Msa1291890 | MtrunA17_Chr3g0085951 | 51.053 | 380 | 169 | 6 | 16 | 385 | 2 | 374 | 7.21e-109 | 325 |
| Msa1291890 | MtrunA17_Chr5g0427711 | 51.989 | 377 | 145 | 6 | 16 | 387 | 3 | 348 | 5.49e-107 | 318 |
| Msa1291890 | MtrunA17_Chr3g0091161 | 47.570 | 391 | 185 | 6 | 9 | 388 | 7 | 388 | 5.70e-105 | 315 |
| Msa1291890 | MtrunA17_Chr3g0085901 | 49.364 | 393 | 144 | 8 | 1 | 387 | 1 | 344 | 1.04e-103 | 310 |
| Msa1291890 | MtrunA17_Chr3g0132661 | 46.310 | 393 | 199 | 5 | 3 | 388 | 15 | 402 | 1.74e-102 | 309 |
| Msa1291890 | MtrunA17_Chr4g0048151 | 45.025 | 402 | 203 | 7 | 1 | 387 | 12 | 410 | 3.47e-100 | 305 |
| Msa1291890 | MtrunA17_Chr4g0049111 | 45.000 | 400 | 203 | 6 | 1 | 386 | 27 | 423 | 6.75e-100 | 305 |
| Msa1291890 | MtrunA17_Chr6g0486911 | 45.813 | 406 | 190 | 10 | 2 | 386 | 7 | 403 | 1.01e-99 | 302 |
| Msa1291890 | MtrunA17_Chr3g0078191 | 47.208 | 394 | 162 | 6 | 4 | 387 | 40 | 397 | 1.67e-99 | 301 |
| Msa1291890 | MtrunA17_Chr7g0249591 | 45.592 | 397 | 168 | 8 | 1 | 388 | 1 | 358 | 5.68e-98 | 298 |
| Msa1291890 | MtrunA17_Chr4g0049041 | 44.802 | 404 | 197 | 7 | 2 | 386 | 14 | 410 | 1.61e-97 | 297 |
| Msa1291890 | MtrunA17_Chr4g0049121 | 44.039 | 411 | 203 | 8 | 1 | 386 | 17 | 425 | 1.96e-97 | 300 |
| Msa1291890 | MtrunA17_Chr3g0084261 | 47.028 | 387 | 189 | 8 | 8 | 388 | 17 | 393 | 3.96e-97 | 295 |
| Msa1291890 | MtrunA17_Chr7g0221741 | 45.570 | 395 | 168 | 6 | 1 | 388 | 1 | 355 | 2.88e-96 | 291 |
| Msa1291890 | MtrunA17_Chr6g0457681 | 43.382 | 408 | 166 | 9 | 1 | 387 | 40 | 403 | 1.00e-95 | 292 |
| Msa1291890 | MtrunA17_Chr5g0424761 | 46.429 | 392 | 169 | 8 | 1 | 387 | 2 | 357 | 6.99e-95 | 288 |
| Msa1291890 | MtrunA17_Chr3g0084241 | 47.757 | 379 | 183 | 6 | 13 | 388 | 4 | 370 | 3.64e-94 | 286 |
| Msa1291890 | MtrunA17_Chr3g0099441 | 41.686 | 427 | 192 | 6 | 15 | 388 | 26 | 448 | 6.36e-94 | 289 |
| Msa1291890 | MtrunA17_Chr4g0005311 | 47.906 | 382 | 184 | 6 | 15 | 387 | 24 | 399 | 4.67e-92 | 282 |
| Msa1291890 | MtrunA17_Chr5g0419301 | 43.000 | 400 | 210 | 8 | 3 | 386 | 10 | 407 | 5.90e-91 | 280 |
| Msa1291890 | MtrunA17_Chr2g0331741 | 45.939 | 394 | 171 | 6 | 5 | 388 | 69 | 430 | 1.13e-90 | 279 |
| Msa1291890 | MtrunA17_Chr4g0049071 | 44.474 | 380 | 199 | 4 | 17 | 386 | 50 | 427 | 2.35e-90 | 278 |
| Msa1291890 | MtrunA17_Chr7g0252201 | 53.763 | 279 | 122 | 4 | 1 | 273 | 1 | 278 | 2.89e-90 | 273 |
| Msa1291890 | MtrunA17_Chr6g0486921 | 42.619 | 420 | 200 | 9 | 3 | 386 | 7 | 421 | 2.97e-90 | 278 |
| Msa1291890 | MtrunA17_Chr3g0085941 | 46.429 | 392 | 166 | 8 | 3 | 386 | 2 | 357 | 5.26e-90 | 275 |
| Msa1291890 | MtrunA17_Chr2g0325081 | 45.431 | 383 | 165 | 6 | 17 | 387 | 14 | 364 | 3.68e-89 | 273 |
| Msa1291890 | MtrunA17_Chr3g0091201 | 48.428 | 318 | 147 | 5 | 1 | 306 | 11 | 323 | 3.79e-86 | 264 |
| Msa1291890 | MtrunA17_Chr3g0082451 | 44.125 | 383 | 175 | 6 | 9 | 388 | 4 | 350 | 6.49e-86 | 265 |
| Msa1291890 | MtrunA17_Chr4g0049531 | 46.628 | 341 | 164 | 6 | 61 | 386 | 2 | 339 | 6.55e-85 | 263 |
| Msa1291890 | MtrunA17_Chr3g0082431 | 44.271 | 384 | 174 | 7 | 9 | 388 | 4 | 351 | 8.83e-85 | 262 |
| Msa1291890 | MtrunA17_Chr5g0440681 | 43.684 | 380 | 175 | 7 | 15 | 388 | 24 | 370 | 2.88e-84 | 261 |
| Msa1291890 | MtrunA17_Chr3g0085981 | 51.342 | 298 | 128 | 6 | 100 | 388 | 1 | 290 | 1.02e-81 | 251 |
| Msa1291890 | MtrunA17_Chr4g0023631 | 43.455 | 382 | 201 | 6 | 13 | 388 | 12 | 384 | 2.57e-79 | 251 |
| Msa1291890 | MtrunA17_Chr6g0460081 | 41.710 | 386 | 169 | 9 | 13 | 384 | 30 | 373 | 2.34e-78 | 246 |
| Msa1291890 | MtrunA17_Chr3g0077781 | 42.211 | 398 | 182 | 12 | 1 | 385 | 1 | 363 | 1.23e-77 | 244 |
| Msa1291890 | MtrunA17_Chr6g0457641 | 45.973 | 298 | 153 | 5 | 13 | 306 | 48 | 341 | 1.41e-76 | 241 |
| Msa1291890 | MtrunA17_Chr7g0221701 | 43.258 | 356 | 152 | 7 | 39 | 388 | 4 | 315 | 1.81e-76 | 239 |
| Msa1291890 | MtrunA17_Chr6g0457621 | 41.117 | 394 | 166 | 11 | 13 | 387 | 30 | 376 | 3.95e-74 | 235 |
| Msa1291890 | MtrunA17_Chr3g0099461 | 37.123 | 431 | 172 | 6 | 14 | 388 | 25 | 412 | 1.56e-72 | 232 |
| Msa1291890 | MtrunA17_Chr5g0419311 | 43.175 | 315 | 166 | 5 | 3 | 306 | 10 | 322 | 3.55e-69 | 221 |
| Msa1291890 | MtrunA17_Chr8g0364381 | 40.347 | 404 | 188 | 12 | 2 | 385 | 53 | 423 | 2.37e-68 | 222 |
| Msa1291890 | MtrunA17_Chr5g0424701 | 46.743 | 261 | 132 | 5 | 1 | 258 | 1 | 257 | 6.09e-68 | 215 |
| Msa1291890 | MtrunA17_Chr6g0460041 | 45.977 | 261 | 133 | 5 | 14 | 270 | 38 | 294 | 2.67e-67 | 215 |
| Msa1291890 | MtrunA17_Chr3g0104731 | 46.442 | 267 | 134 | 5 | 11 | 270 | 13 | 277 | 1.93e-65 | 209 |
| Msa1291890 | MtrunA17_Chr1g0199541 | 45.594 | 261 | 136 | 3 | 4 | 260 | 13 | 271 | 5.08e-65 | 208 |
| Msa1291890 | MtrunA17_Chr4g0070811 | 44.850 | 301 | 122 | 6 | 100 | 388 | 1 | 269 | 1.14e-64 | 207 |
| Msa1291890 | MtrunA17_Chr3g0078731 | 39.547 | 397 | 183 | 11 | 16 | 387 | 10 | 374 | 1.21e-63 | 208 |
| Msa1291890 | MtrunA17_Chr3g0084251 | 43.252 | 326 | 170 | 6 | 72 | 388 | 252 | 571 | 1.41e-63 | 213 |
| Msa1291890 | MtrunA17_Chr3g0084251 | 51.786 | 224 | 105 | 2 | 3 | 223 | 10 | 233 | 7.24e-53 | 184 |
| Msa1291890 | MtrunA17_Chr3g0078891 | 39.949 | 393 | 183 | 11 | 16 | 387 | 10 | 370 | 4.41e-63 | 207 |
| Msa1291890 | MtrunA17_Chr3g0104721 | 45.956 | 272 | 135 | 6 | 1 | 263 | 14 | 282 | 3.24e-60 | 197 |
| Msa1291890 | MtrunA17_Chr3g0091211 | 43.816 | 283 | 103 | 6 | 15 | 287 | 9 | 245 | 2.92e-59 | 192 |
| Msa1291890 | MtrunA17_Chr3g0077791 | 40.854 | 328 | 172 | 9 | 1 | 308 | 1 | 326 | 7.38e-56 | 186 |
| Msa1291890 | MtrunA17_Chr8g0362531 | 32.921 | 404 | 223 | 11 | 3 | 387 | 24 | 398 | 1.01e-51 | 177 |
| Msa1291890 | MtrunA17_Chr4g0049091 | 37.651 | 332 | 156 | 9 | 89 | 386 | 1 | 315 | 1.03e-49 | 172 |
| Msa1291890 | MtrunA17_Chr3g0078681 | 40.196 | 306 | 157 | 9 | 13 | 293 | 21 | 325 | 1.75e-49 | 170 |
| Msa1291890 | MtrunA17_Chr1g0170171 | 38.158 | 304 | 152 | 8 | 9 | 308 | 17 | 288 | 7.87e-47 | 162 |
| Msa1291890 | MtrunA17_Chr8g0361351 | 31.701 | 388 | 219 | 14 | 15 | 387 | 10 | 366 | 6.45e-46 | 161 |
| Msa1291890 | MtrunA17_Chr5g0404531 | 49.254 | 201 | 92 | 5 | 135 | 334 | 1 | 192 | 1.17e-44 | 152 |
| Msa1291890 | MtrunA17_Chr1g0181881 | 52.381 | 147 | 67 | 1 | 4 | 147 | 3 | 149 | 1.83e-44 | 151 |
| Msa1291890 | MtrunA17_Chr4g0049081 | 50.303 | 165 | 72 | 3 | 231 | 386 | 7 | 170 | 7.25e-41 | 142 |
| Msa1291890 | MtrunA17_Chr3g0084231 | 40.083 | 242 | 98 | 5 | 186 | 388 | 125 | 358 | 1.61e-39 | 144 |
| Msa1291890 | MtrunA17_Chr3g0084231 | 58.095 | 105 | 39 | 2 | 13 | 112 | 21 | 125 | 7.37e-26 | 107 |
| Msa1291890 | MtrunA17_Chr4g0049141 | 42.453 | 212 | 101 | 5 | 195 | 386 | 2 | 212 | 3.10e-38 | 139 |
| Msa1291890 | MtrunA17_Chr2g0331731 | 44.059 | 202 | 73 | 4 | 195 | 387 | 2 | 172 | 3.28e-38 | 135 |
| Msa1291890 | MtrunA17_Chr3g0099431 | 46.980 | 149 | 78 | 1 | 159 | 306 | 9 | 157 | 5.32e-37 | 131 |
| Msa1291890 | MtrunA17_Chr4g0011401 | 33.929 | 336 | 191 | 8 | 13 | 334 | 142 | 460 | 8.37e-37 | 140 |
| Msa1291890 | MtrunA17_Chr4g0039521 | 42.041 | 245 | 109 | 5 | 1 | 240 | 1 | 217 | 1.17e-36 | 133 |
| Msa1291890 | MtrunA17_Chr7g0220351 | 35.693 | 339 | 182 | 13 | 17 | 328 | 148 | 477 | 6.12e-35 | 134 |
| Msa1291890 | MtrunA17_Chr1g0188701 | 33.333 | 252 | 153 | 5 | 16 | 253 | 3 | 253 | 9.97e-35 | 129 |
| Msa1291890 | MtrunA17_Chr4g0058061 | 35.179 | 307 | 175 | 9 | 13 | 309 | 154 | 446 | 3.52e-33 | 129 |
| Msa1291890 | MtrunA17_Chr6g0452031 | 33.463 | 257 | 149 | 7 | 14 | 249 | 13 | 268 | 1.64e-32 | 124 |
| Msa1291890 | MtrunA17_Chr3g0100081 | 30.398 | 352 | 173 | 11 | 11 | 309 | 19 | 351 | 2.51e-32 | 125 |
| Msa1291890 | MtrunA17_Chr6g0488401 | 31.700 | 347 | 208 | 13 | 1 | 330 | 1 | 335 | 8.50e-32 | 124 |
| Msa1291890 | MtrunA17_Chr4g0011331 | 35.110 | 319 | 178 | 11 | 14 | 320 | 151 | 452 | 1.57e-30 | 121 |
| Msa1291890 | MtrunA17_Chr3g0091331 | 48.529 | 136 | 65 | 3 | 173 | 305 | 15 | 148 | 9.48e-30 | 112 |
| Msa1291890 | MtrunA17_Chr8g0361241 | 27.154 | 383 | 172 | 12 | 15 | 387 | 10 | 295 | 1.54e-29 | 115 |
| Msa1291890 | MtrunA17_Chr4g0011321 | 32.107 | 299 | 165 | 11 | 4 | 295 | 17 | 284 | 3.54e-28 | 112 |
| Msa1291890 | MtrunA17_Chr4g0049131 | 49.505 | 101 | 51 | 0 | 16 | 116 | 6 | 106 | 3.83e-28 | 107 |
| Msa1291890 | MtrunA17_Chr3g0087471 | 48.800 | 125 | 63 | 1 | 3 | 126 | 12 | 136 | 1.06e-27 | 106 |
| Msa1291890 | MtrunA17_Chr4g0049061 | 44.697 | 132 | 64 | 3 | 1 | 123 | 14 | 145 | 1.32e-27 | 106 |
| Msa1291890 | MtrunA17_Chr8g0342451 | 31.650 | 297 | 160 | 9 | 14 | 271 | 33 | 325 | 4.45e-27 | 111 |
| Msa1291890 | MtrunA17_Chr6g0488371 | 36.058 | 208 | 123 | 5 | 13 | 210 | 7 | 214 | 2.19e-26 | 105 |
| Msa1291890 | MtrunA17_Chr4g0023731 | 45.763 | 118 | 59 | 2 | 2 | 118 | 9 | 122 | 1.21e-25 | 103 |
| Msa1291890 | MtrunA17_Chr5g0404351 | 45.763 | 118 | 63 | 1 | 34 | 150 | 10 | 127 | 1.04e-24 | 98.2 |
| Msa1291890 | MtrunA17_Chr6g0460051 | 47.222 | 108 | 55 | 1 | 13 | 118 | 48 | 155 | 1.31e-24 | 98.6 |
| Msa1291890 | MtrunA17_Chr4g0076201 | 45.324 | 139 | 65 | 4 | 257 | 386 | 35 | 171 | 1.79e-24 | 99.4 |
| Msa1291890 | MtrunA17_Chr7g0269551 | 43.443 | 122 | 67 | 1 | 159 | 280 | 2 | 121 | 3.35e-24 | 96.7 |
| Msa1291890 | MtrunA17_Chr4g0049051 | 44.094 | 127 | 69 | 1 | 178 | 304 | 2 | 126 | 3.69e-24 | 97.1 |
| Msa1291890 | MtrunA17_Chr3g0080921 | 50.862 | 116 | 51 | 3 | 59 | 171 | 5 | 117 | 1.34e-22 | 92.0 |
| Msa1291890 | MtrunA17_Chr1g0170181 | 34.263 | 251 | 129 | 5 | 140 | 388 | 31 | 247 | 2.06e-21 | 92.4 |
| Msa1291890 | MtrunA17_Chr6g0462351 | 39.831 | 118 | 69 | 1 | 176 | 293 | 7 | 122 | 6.58e-21 | 87.4 |
| Msa1291890 | MtrunA17_Chr2g0330161 | 37.500 | 152 | 85 | 4 | 3 | 146 | 25 | 174 | 3.85e-20 | 91.7 |
| Msa1291890 | MtrunA17_Chr7g0236101 | 31.737 | 167 | 106 | 3 | 14 | 178 | 6 | 166 | 2.68e-17 | 79.0 |
| Msa1291890 | MtrunA17_Chr7g0236151 | 31.902 | 163 | 107 | 3 | 14 | 173 | 6 | 167 | 2.80e-16 | 79.0 |
| Msa1291890 | MtrunA17_Chr7g0236191 | 31.902 | 163 | 107 | 3 | 14 | 173 | 6 | 167 | 2.80e-16 | 79.0 |
| Msa1291890 | MtrunA17_Chr3g0086141 | 34.884 | 172 | 98 | 4 | 17 | 178 | 3 | 170 | 2.68e-15 | 74.3 |
| Msa1291890 | MtrunA17_Chr3g0136291 | 33.766 | 154 | 97 | 3 | 17 | 165 | 14 | 167 | 3.23e-15 | 75.9 |
| Msa1291890 | MtrunA17_Chr2g0278121 | 34.171 | 199 | 105 | 7 | 3 | 178 | 2 | 197 | 8.03e-15 | 75.5 |
| Msa1291890 | MtrunA17_Chr3g0107721 | 32.558 | 172 | 97 | 5 | 17 | 171 | 3 | 172 | 3.92e-14 | 73.6 |
| Msa1291890 | MtrunA17_Chr1g0166251 | 32.759 | 174 | 106 | 4 | 17 | 186 | 11 | 177 | 4.72e-14 | 73.2 |
| Msa1291890 | MtrunA17_Chr3g0096461 | 30.631 | 222 | 128 | 7 | 17 | 223 | 23 | 233 | 1.06e-13 | 72.4 |
| Msa1291890 | MtrunA17_Chr3g0086041 | 37.143 | 140 | 82 | 4 | 14 | 147 | 23 | 162 | 1.27e-13 | 71.6 |
| Msa1291890 | MtrunA17_Chr3g0139601 | 29.114 | 237 | 128 | 6 | 16 | 224 | 12 | 236 | 1.31e-13 | 72.0 |
| Msa1291890 | MtrunA17_Chr7g0226481 | 30.460 | 174 | 110 | 3 | 10 | 178 | 4 | 171 | 1.37e-13 | 71.2 |
| Msa1291890 | MtrunA17_Chr7g0236171 | 34.375 | 128 | 74 | 3 | 16 | 136 | 8 | 132 | 1.64e-13 | 68.2 |
| Msa1291890 | MtrunA17_Chr7g0236131 | 34.375 | 128 | 74 | 3 | 16 | 136 | 8 | 132 | 1.64e-13 | 68.2 |
| Msa1291890 | MtrunA17_Chr7g0236081 | 34.375 | 128 | 74 | 3 | 16 | 136 | 8 | 132 | 1.64e-13 | 68.2 |
| Msa1291890 | MtrunA17_Chr7g0236211 | 32.000 | 225 | 112 | 8 | 12 | 202 | 7 | 224 | 2.01e-13 | 71.2 |
| Msa1291890 | MtrunA17_Chr7g0222771 | 28.981 | 314 | 197 | 10 | 9 | 305 | 17 | 321 | 2.26e-13 | 70.9 |
| Msa1291890 | MtrunA17_Chr4g0010971 | 30.705 | 241 | 147 | 10 | 76 | 309 | 1 | 228 | 4.48e-13 | 68.9 |
| Msa1291890 | MtrunA17_Chr7g0262091 | 29.697 | 165 | 109 | 2 | 17 | 178 | 18 | 178 | 6.78e-13 | 69.7 |
| Msa1291890 | MtrunA17_Chr7g0222761 | 26.102 | 295 | 193 | 9 | 1 | 281 | 11 | 294 | 7.84e-13 | 69.3 |
| Msa1291890 | MtrunA17_Chr7g0262131 | 39.560 | 91 | 55 | 0 | 17 | 107 | 18 | 108 | 8.68e-13 | 65.1 |
| Msa1291890 | MtrunA17_Chr3g0091171 | 29.586 | 169 | 107 | 5 | 17 | 178 | 5 | 168 | 1.05e-12 | 68.9 |
| Msa1291890 | MtrunA17_Chr7g0227621 | 47.826 | 69 | 36 | 0 | 15 | 83 | 9 | 77 | 1.21e-12 | 63.9 |
| Msa1291890 | MtrunA17_Chr7g0262121 | 28.916 | 166 | 111 | 3 | 17 | 179 | 20 | 181 | 1.41e-12 | 68.6 |
| Msa1291890 | MtrunA17_Chr7g0236221 | 46.753 | 77 | 41 | 0 | 16 | 92 | 8 | 84 | 2.37e-12 | 63.9 |
| Msa1291890 | MtrunA17_Chr7g0227821 | 33.628 | 113 | 74 | 1 | 10 | 122 | 4 | 115 | 2.43e-12 | 66.2 |
| Msa1291890 | MtrunA17_Chr4g0041581 | 27.410 | 332 | 214 | 10 | 11 | 328 | 17 | 335 | 2.43e-12 | 68.2 |
| Msa1291890 | MtrunA17_Chr7g0227851 | 30.000 | 210 | 109 | 9 | 15 | 205 | 9 | 199 | 2.77e-12 | 67.8 |
| Msa1291890 | MtrunA17_Chr5g0435741 | 34.043 | 141 | 89 | 3 | 12 | 149 | 28 | 167 | 5.11e-12 | 67.0 |
| Msa1291890 | MtrunA17_Chr7g0274231 | 28.431 | 204 | 118 | 6 | 16 | 204 | 11 | 201 | 5.95e-12 | 65.5 |
| Msa1291890 | MtrunA17_Chr1g0198241 | 44.444 | 81 | 43 | 1 | 14 | 92 | 3 | 83 | 8.01e-12 | 61.6 |
| Msa1291890 | MtrunA17_Chr3g0093361 | 30.657 | 137 | 90 | 3 | 17 | 148 | 43 | 179 | 9.94e-12 | 65.9 |
| Msa1291890 | MtrunA17_Chr8g0363981 | 36.496 | 137 | 79 | 5 | 17 | 148 | 25 | 158 | 1.13e-11 | 65.9 |
| Msa1291890 | MtrunA17_Chr4g0012101 | 31.760 | 233 | 130 | 11 | 76 | 296 | 1 | 216 | 1.28e-11 | 64.7 |
| Msa1291890 | MtrunA17_Chr3g0124041 | 46.479 | 71 | 38 | 0 | 15 | 85 | 10 | 80 | 2.02e-11 | 60.5 |
| Msa1291890 | MtrunA17_Chr5g0438191 | 34.000 | 150 | 86 | 4 | 1 | 146 | 1 | 141 | 2.50e-11 | 65.1 |
| Msa1291890 | MtrunA17_Chr3g0137681 | 32.948 | 173 | 106 | 5 | 13 | 178 | 6 | 175 | 2.55e-11 | 64.7 |
| Msa1291890 | MtrunA17_Chr8g0362021 | 44.944 | 89 | 43 | 3 | 1 | 83 | 1 | 89 | 2.82e-11 | 64.7 |
| Msa1291890 | MtrunA17_Chr7g0227641 | 39.773 | 88 | 51 | 1 | 15 | 102 | 9 | 94 | 2.96e-11 | 64.3 |
| Msa1291890 | MtrunA17_Chr3g0138571 | 32.117 | 137 | 86 | 3 | 15 | 147 | 11 | 144 | 4.08e-11 | 63.9 |
| Msa1291890 | MtrunA17_Chr7g0227651 | 35.577 | 104 | 65 | 1 | 17 | 118 | 11 | 114 | 4.25e-11 | 63.9 |
| Msa1291890 | MtrunA17_Chr5g0396411 | 32.022 | 178 | 104 | 6 | 19 | 192 | 1 | 165 | 5.27e-11 | 63.9 |
| Msa1291890 | MtrunA17_Chr5g0405101 | 32.278 | 158 | 81 | 5 | 13 | 149 | 15 | 167 | 5.37e-11 | 61.2 |
| Msa1291890 | MtrunA17_Chr2g0278131 | 47.761 | 67 | 32 | 1 | 17 | 80 | 14 | 80 | 6.54e-11 | 58.2 |
| Msa1291890 | MtrunA17_Chr8g0362521 | 45.455 | 77 | 33 | 2 | 16 | 83 | 14 | 90 | 7.91e-11 | 63.5 |
| Msa1291890 | MtrunA17_Chr7g0215531 | 41.975 | 81 | 45 | 1 | 17 | 95 | 13 | 93 | 8.43e-11 | 60.5 |
| Msa1291890 | MtrunA17_Chr2g0326831 | 26.989 | 352 | 198 | 13 | 19 | 323 | 71 | 410 | 9.14e-11 | 63.5 |
| Msa1291890 | MtrunA17_Chr2g0278101 | 28.033 | 239 | 124 | 10 | 17 | 232 | 12 | 225 | 9.89e-11 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1291890 | AT1G69630.1 | 23.981 | 417 | 270 | 11 | 2 | 379 | 3 | 411 | 1.03e-20 | 94.0 |
| Msa1291890 | AT1G66310.1 | 25.117 | 426 | 247 | 13 | 11 | 388 | 13 | 414 | 6.11e-20 | 91.7 |
| Msa1291890 | AT1G66290.1 | 25.647 | 425 | 240 | 15 | 8 | 383 | 20 | 417 | 2.93e-18 | 86.7 |
| Msa1291890 | AT1G78760.1 | 23.747 | 379 | 258 | 10 | 7 | 368 | 6 | 370 | 5.22e-17 | 82.8 |
| Msa1291890 | AT4G13965.1 | 29.098 | 244 | 152 | 6 | 15 | 250 | 8 | 238 | 1.41e-16 | 81.3 |
| Msa1291890 | AT1G66300.1 | 25.061 | 411 | 248 | 14 | 17 | 383 | 29 | 423 | 1.45e-16 | 81.6 |
| Msa1291890 | AT5G53840.1 | 33.728 | 169 | 99 | 6 | 14 | 178 | 15 | 174 | 2.64e-16 | 80.5 |
| Msa1291890 | AT1G66320.1 | 23.501 | 417 | 237 | 14 | 21 | 383 | 34 | 422 | 5.74e-16 | 79.7 |
| Msa1291890 | AT1G80470.1 | 24.759 | 311 | 209 | 11 | 17 | 316 | 15 | 311 | 5.91e-15 | 76.6 |
| Msa1291890 | AT3G26922.1 | 29.630 | 243 | 152 | 10 | 15 | 249 | 12 | 243 | 6.16e-15 | 75.5 |
| Msa1291890 | AT3G26922.2 | 29.630 | 243 | 152 | 10 | 15 | 249 | 12 | 243 | 6.16e-15 | 75.5 |
| Msa1291890 | AT5G22720.1 | 32.727 | 165 | 99 | 6 | 16 | 174 | 22 | 180 | 7.92e-15 | 76.3 |
| Msa1291890 | AT1G60410.1 | 26.829 | 246 | 147 | 8 | 14 | 242 | 7 | 236 | 1.77e-14 | 74.7 |
| Msa1291890 | AT1G78750.2 | 24.601 | 313 | 206 | 10 | 17 | 306 | 18 | 323 | 2.01e-14 | 75.1 |
| Msa1291890 | AT1G78750.1 | 24.601 | 313 | 206 | 10 | 17 | 306 | 18 | 323 | 2.01e-14 | 75.1 |
| Msa1291890 | AT4G13960.2 | 28.779 | 344 | 194 | 15 | 17 | 329 | 2 | 325 | 3.37e-14 | 74.3 |
| Msa1291890 | AT4G13960.1 | 28.779 | 344 | 194 | 15 | 17 | 329 | 2 | 325 | 3.37e-14 | 74.3 |
| Msa1291890 | AT4G13985.1 | 26.730 | 318 | 191 | 11 | 17 | 306 | 19 | 322 | 3.67e-14 | 74.3 |
| Msa1291890 | AT2G42730.1 | 26.374 | 273 | 178 | 6 | 14 | 272 | 2 | 265 | 1.06e-13 | 72.8 |
| Msa1291890 | AT1G16930.2 | 24.779 | 339 | 209 | 9 | 13 | 325 | 11 | 329 | 1.44e-13 | 72.4 |
| Msa1291890 | AT1G16930.1 | 24.779 | 339 | 209 | 9 | 13 | 325 | 11 | 329 | 1.44e-13 | 72.4 |
| Msa1291890 | AT1G16930.3 | 24.779 | 339 | 209 | 9 | 13 | 325 | 11 | 329 | 1.44e-13 | 72.4 |
| Msa1291890 | AT4G14096.2 | 26.935 | 323 | 211 | 9 | 16 | 323 | 7 | 319 | 1.93e-13 | 72.0 |
| Msa1291890 | AT4G14096.1 | 26.935 | 323 | 211 | 9 | 16 | 323 | 7 | 319 | 1.93e-13 | 72.0 |
| Msa1291890 | AT1G78840.1 | 35.882 | 170 | 93 | 9 | 14 | 177 | 2 | 161 | 1.95e-13 | 72.0 |
| Msa1291890 | AT1G78840.2 | 35.882 | 170 | 93 | 9 | 14 | 177 | 2 | 161 | 1.95e-13 | 72.0 |
| Msa1291890 | AT3G59190.1 | 27.925 | 265 | 160 | 10 | 1 | 248 | 1 | 251 | 3.25e-13 | 70.9 |
| Msa1291890 | AT5G22730.1 | 23.575 | 386 | 254 | 13 | 15 | 372 | 26 | 398 | 6.35e-13 | 70.5 |
| Msa1291890 | AT5G22730.3 | 23.575 | 386 | 254 | 13 | 15 | 372 | 26 | 398 | 6.35e-13 | 70.5 |
| Msa1291890 | AT4G14103.3 | 25.455 | 330 | 218 | 8 | 14 | 323 | 5 | 326 | 6.63e-13 | 70.1 |
| Msa1291890 | AT4G14103.1 | 25.455 | 330 | 218 | 8 | 14 | 323 | 5 | 326 | 6.63e-13 | 70.1 |
| Msa1291890 | AT3G59190.2 | 27.925 | 265 | 160 | 10 | 1 | 248 | 1 | 251 | 7.36e-13 | 70.5 |
| Msa1291890 | AT4G14103.2 | 25.455 | 330 | 218 | 8 | 14 | 323 | 5 | 326 | 1.12e-12 | 69.7 |
| Msa1291890 | AT2G26030.4 | 22.781 | 338 | 220 | 11 | 15 | 325 | 2 | 325 | 1.72e-12 | 68.9 |
| Msa1291890 | AT2G26030.3 | 22.781 | 338 | 220 | 11 | 15 | 325 | 2 | 325 | 1.91e-12 | 68.9 |
| Msa1291890 | AT2G26030.1 | 22.781 | 338 | 220 | 11 | 15 | 325 | 2 | 325 | 1.91e-12 | 68.9 |
| Msa1291890 | AT3G28410.1 | 25.664 | 339 | 222 | 13 | 14 | 341 | 25 | 344 | 2.06e-12 | 68.9 |
| Msa1291890 | AT1G55030.2 | 25.540 | 278 | 192 | 6 | 3 | 277 | 5 | 270 | 2.24e-12 | 68.6 |
| Msa1291890 | AT5G22730.2 | 25.455 | 275 | 180 | 8 | 15 | 275 | 26 | 289 | 2.91e-12 | 68.2 |
| Msa1291890 | AT2G04230.1 | 28.226 | 248 | 158 | 8 | 15 | 249 | 11 | 251 | 3.09e-12 | 68.2 |
| Msa1291890 | AT3G58860.1 | 29.555 | 247 | 144 | 9 | 17 | 247 | 7 | 239 | 6.42e-12 | 67.4 |
| Msa1291890 | AT1G13780.2 | 25.378 | 331 | 198 | 14 | 17 | 313 | 10 | 325 | 1.02e-11 | 65.9 |
| Msa1291890 | AT3G58930.3 | 25.556 | 360 | 209 | 14 | 17 | 332 | 2 | 346 | 1.15e-11 | 66.6 |
| Msa1291890 | AT3G58930.1 | 25.556 | 360 | 209 | 14 | 17 | 332 | 2 | 346 | 1.15e-11 | 66.6 |
| Msa1291890 | AT3G58930.5 | 25.556 | 360 | 209 | 14 | 17 | 332 | 2 | 346 | 1.15e-11 | 66.6 |
| Msa1291890 | AT1G66300.2 | 25.369 | 406 | 207 | 16 | 17 | 383 | 29 | 377 | 1.24e-11 | 66.2 |
| Msa1291890 | AT5G44490.1 | 23.720 | 371 | 239 | 14 | 1 | 345 | 1 | 353 | 1.42e-11 | 66.2 |
| Msa1291890 | AT5G44490.2 | 23.720 | 371 | 239 | 14 | 1 | 345 | 1 | 353 | 1.42e-11 | 66.2 |
| Msa1291890 | AT5G22700.6 | 34.752 | 141 | 86 | 2 | 10 | 146 | 36 | 174 | 1.76e-11 | 65.9 |
| Msa1291890 | AT5G44940.1 | 31.138 | 167 | 99 | 6 | 17 | 174 | 5 | 164 | 1.77e-11 | 65.5 |
| Msa1291890 | AT5G22700.5 | 34.752 | 141 | 86 | 2 | 10 | 146 | 36 | 174 | 1.88e-11 | 65.9 |
| Msa1291890 | AT1G55030.1 | 25.758 | 264 | 181 | 6 | 17 | 277 | 9 | 260 | 1.94e-11 | 65.5 |
| Msa1291890 | AT3G50710.1 | 27.152 | 302 | 191 | 12 | 17 | 304 | 2 | 288 | 2.00e-11 | 65.5 |
| Msa1291890 | AT1G55660.2 | 27.016 | 248 | 161 | 9 | 6 | 242 | 42 | 280 | 2.22e-11 | 65.1 |
| Msa1291890 | AT5G02910.2 | 37.984 | 129 | 72 | 3 | 14 | 140 | 8 | 130 | 2.59e-11 | 65.1 |
| Msa1291890 | AT5G02910.3 | 37.984 | 129 | 72 | 3 | 14 | 140 | 8 | 130 | 3.24e-11 | 64.7 |
| Msa1291890 | AT2G42720.1 | 28.782 | 271 | 142 | 9 | 17 | 263 | 2 | 245 | 4.39e-11 | 64.7 |
| Msa1291890 | AT5G22610.1 | 30.723 | 166 | 103 | 4 | 16 | 173 | 17 | 178 | 4.58e-11 | 64.7 |
| Msa1291890 | AT5G02910.1 | 37.984 | 129 | 72 | 3 | 14 | 140 | 8 | 130 | 4.79e-11 | 64.7 |
| Msa1291890 | AT1G13780.1 | 25.153 | 326 | 195 | 14 | 17 | 308 | 10 | 320 | 4.81e-11 | 64.7 |
| Msa1291890 | AT5G22670.1 | 25.962 | 312 | 199 | 9 | 15 | 307 | 9 | 307 | 4.84e-11 | 64.3 |
| Msa1291890 | AT1G55660.1 | 27.016 | 248 | 161 | 9 | 6 | 242 | 42 | 280 | 5.06e-11 | 64.7 |
| Msa1291890 | AT3G58960.1 | 28.819 | 288 | 155 | 13 | 17 | 274 | 2 | 269 | 5.51e-11 | 64.3 |
| Msa1291890 | AT5G53635.1 | 30.180 | 222 | 137 | 8 | 19 | 232 | 2 | 213 | 5.55e-11 | 64.3 |
| Msa1291890 | AT5G22610.2 | 30.723 | 166 | 103 | 4 | 16 | 173 | 17 | 178 | 6.15e-11 | 64.3 |
| Msa1291890 | AT3G59150.1 | 28.674 | 279 | 179 | 10 | 8 | 272 | 4 | 276 | 6.71e-11 | 64.3 |
| Msa1291890 | AT5G22700.2 | 35.036 | 137 | 83 | 2 | 14 | 146 | 3 | 137 | 7.01e-11 | 63.9 |
| Msa1291890 | AT5G22700.3 | 35.036 | 137 | 83 | 2 | 14 | 146 | 3 | 137 | 7.01e-11 | 63.9 |
| Msa1291890 | AT5G22700.1 | 35.036 | 137 | 83 | 2 | 14 | 146 | 3 | 137 | 7.01e-11 | 63.9 |
| Msa1291890 | AT5G22700.4 | 35.036 | 137 | 83 | 2 | 14 | 146 | 3 | 137 | 7.01e-11 | 63.9 |
Find 72 sgRNAs with CRISPR-Local
Find 209 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGGGTTATGTTCTAATTTA+AGG | 0.098914 | 8_3:+47475289 | Msa1291890:three_prime_UTR |
| GTTCGATTGTATTGTTAAAT+TGG | 0.166177 | 8_3:-47472329 | None:intergenic |
| GAGGCTCCACAGAACCTTTC+CGG | 0.252332 | 8_3:-47471958 | None:intergenic |
| ACTTATCACAACTGCTTTCC+AGG | 0.276183 | 8_3:+47472998 | Msa1291890:CDS |
| GTCATTAACTAGATTGTAAA+AGG | 0.280924 | 8_3:+47473120 | Msa1291890:exon |
| TCTCTCTCTTTCTCTGCAAT+TGG | 0.294169 | 8_3:-47475150 | None:intergenic |
| AATCCTCTTGAGATACTCTT+TGG | 0.303138 | 8_3:+47472421 | Msa1291890:CDS |
| AGGTTAGAGGAAGCGTTTAA+AGG | 0.314114 | 8_3:+47473018 | Msa1291890:CDS |
| ACACTCTCTTTCTCTGCAAT+TGG | 0.315672 | 8_3:-47475125 | None:intergenic |
| ACAACTGCTTTCCAGGTTAG+AGG | 0.336629 | 8_3:+47473005 | Msa1291890:CDS |
| GGTCTCTTCAACTACTCTTC+AGG | 0.345230 | 8_3:+47472564 | Msa1291890:CDS |
| TTTCTTGCGGTATTAGGTAT+TGG | 0.354944 | 8_3:-47472121 | None:intergenic |
| GATTTAAATTGAAAATTCAT+AGG | 0.360114 | 8_3:-47475355 | None:intergenic |
| AGAGACCACCAATGATTTGA+TGG | 0.372452 | 8_3:-47472548 | None:intergenic |
| TTCAAGTTGCATGACTTTAC+CGG | 0.373501 | 8_3:+47472150 | Msa1291890:CDS |
| CATGGTTCCTGATTTATTGA+AGG | 0.373966 | 8_3:+47472885 | Msa1291890:CDS |
| CCACAAGATGGAACAATCTC+TGG | 0.389912 | 8_3:+47471810 | Msa1291890:CDS |
| GAGTATCTCAAGAGGATTAC+CGG | 0.389936 | 8_3:-47472416 | None:intergenic |
| GGTAGTTTGAACGGCGTGTT+TGG | 0.393877 | 8_3:-47471780 | None:intergenic |
| CAATTGGAAACACATTTCCT+TGG | 0.401795 | 8_3:-47475109 | None:intergenic |
| AACTCAACCTTCAATAAATC+AGG | 0.421944 | 8_3:-47472892 | None:intergenic |
| CATTTCTTAGGTTCTCTCCA+TGG | 0.425794 | 8_3:+47472867 | Msa1291890:intron |
| ACTAGTTCATAGAGCTGAAC+TGG | 0.426499 | 8_3:+47475042 | Msa1291890:intron |
| CCAGAGATTGTTCCATCTTG+TGG | 0.431308 | 8_3:-47471810 | None:intergenic |
| CAGCGACTTCAAGTTACATA+AGG | 0.431511 | 8_3:-47472920 | None:intergenic |
| AGTGTGTGGAGTTTAATCTA+AGG | 0.431548 | 8_3:-47471847 | None:intergenic |
| ATAATTAGAAGTAGTGTGAT+TGG | 0.435113 | 8_3:+47475085 | Msa1291890:three_prime_UTR |
| ATCCTCTTGAGATACTCTTT+GGG | 0.446494 | 8_3:+47472422 | Msa1291890:CDS |
| TTTAAACGCTTCCTCTAACC+TGG | 0.454474 | 8_3:-47473016 | None:intergenic |
| TCCTTTCGCGGTAACAATAG+TGG | 0.459732 | 8_3:+47472202 | Msa1291890:CDS |
| GTGTTACATTTAAAGAAATA+CGG | 0.469793 | 8_3:-47472070 | None:intergenic |
| AATTGGAAACACATTTCCTT+GGG | 0.470075 | 8_3:-47475108 | None:intergenic |
| CTACCATTCTTTCCACAAGA+TGG | 0.475044 | 8_3:+47471798 | Msa1291890:CDS |
| GTTCCATCTTGTGGAAAGAA+TGG | 0.477626 | 8_3:-47471801 | None:intergenic |
| TATGTGAAAGAGAATGCAAT+CGG | 0.487480 | 8_3:-47471741 | None:intergenic |
| CTTATCCAGGTCGTTGATAG+AGG | 0.491440 | 8_3:+47472972 | Msa1291890:CDS |
| TTCTGCCATCAAATCATTGG+TGG | 0.498968 | 8_3:+47472543 | Msa1291890:CDS |
| GGCGTGTTTGGTTTCTAAAG+AGG | 0.503650 | 8_3:-47471768 | None:intergenic |
| GGAAAGCAGTTGTGATAAGT+TGG | 0.508948 | 8_3:-47472995 | None:intergenic |
| GTGTGTGGAGTTTAATCTAA+GGG | 0.512529 | 8_3:-47471846 | None:intergenic |
| TAGAGGAAGCGTTTAAAGGA+AGG | 0.513979 | 8_3:+47473022 | Msa1291890:CDS |
| GCCACTATTGTTACCGCGAA+AGG | 0.516648 | 8_3:-47472203 | None:intergenic |
| GCATTGACGTAAATGTAGCT+TGG | 0.527977 | 8_3:+47472473 | Msa1291890:CDS |
| TCTATAAGCTTACTAAGTAT+AGG | 0.530167 | 8_3:-47471980 | None:intergenic |
| GTGCTTGATATGCAAAACTT+TGG | 0.531022 | 8_3:-47472298 | None:intergenic |
| AACAATGAAGAAACGAAGAA+AGG | 0.534194 | 8_3:+47471670 | None:intergenic |
| GCTGAACTGGTAGAGAATCA+AGG | 0.538682 | 8_3:+47475055 | Msa1291890:three_prime_UTR |
| TATTGTTAAATTGGTAAGTG+TGG | 0.545945 | 8_3:-47472320 | None:intergenic |
| ATACAATCGAACGATGGACT+TGG | 0.564424 | 8_3:+47472340 | Msa1291890:CDS |
| TAGGTATTGGAGTACTAGAG+AGG | 0.567441 | 8_3:-47472108 | None:intergenic |
| ATAAGCTTACTAAGTATAGG+AGG | 0.571201 | 8_3:-47471977 | None:intergenic |
| CAACAACTTGACAATTCTCA+AGG | 0.577880 | 8_3:-47472270 | None:intergenic |
| ATGTGAAAGAGAATGCAATC+GGG | 0.582036 | 8_3:-47471740 | None:intergenic |
| TCACAAAGATATCTAACCGT+TGG | 0.582935 | 8_3:-47472024 | None:intergenic |
| GGAAAGAATGGTAGTTTGAA+CGG | 0.583290 | 8_3:-47471789 | None:intergenic |
| CTTCAATAAATCAGGAACCA+TGG | 0.584761 | 8_3:-47472884 | None:intergenic |
| TTTCAACCGGAAAGGTTCTG+TGG | 0.588833 | 8_3:+47471952 | Msa1291890:CDS |
| GATATCTTTGTGAGATGTGA+CGG | 0.594143 | 8_3:+47472034 | Msa1291890:CDS |
| TAACTAGCTTGTCTCTACGA+TGG | 0.609452 | 8_3:+47472176 | Msa1291890:CDS |
| CGTGTTCAATAGACGAAAGA+CGG | 0.610521 | 8_3:-47472447 | None:intergenic |
| AGAGACAAGCTAGTTAATGC+CGG | 0.612176 | 8_3:-47472169 | None:intergenic |
| AGCCAACTAAGCAAAACTGA+AGG | 0.619317 | 8_3:-47472511 | None:intergenic |
| ACACATTCATCTATACCTGA+TGG | 0.624228 | 8_3:+47473051 | Msa1291890:CDS |
| GAAGTAGTGTGATTGGCCCA+AGG | 0.638653 | 8_3:+47475092 | Msa1291890:three_prime_UTR |
| GTTGGCCTCTATCAACGACC+TGG | 0.643199 | 8_3:-47472977 | None:intergenic |
| CTGCTTCACACAATGTCCAA+CGG | 0.656603 | 8_3:+47472008 | Msa1291890:CDS |
| CTCCCAAAGAGTATCTCAAG+AGG | 0.656764 | 8_3:-47472424 | None:intergenic |
| ATCTTGAAAAGGGCTCAGCA+CGG | 0.657382 | 8_3:-47472225 | None:intergenic |
| TTACATTTAAAGAAATACGG+TGG | 0.665262 | 8_3:-47472067 | None:intergenic |
| TTAACAATACAATCGAACGA+TGG | 0.669434 | 8_3:+47472334 | Msa1291890:CDS |
| AAGCAACTAAAGAAATGCAG+AGG | 0.682925 | 8_3:+47475184 | Msa1291890:three_prime_UTR |
| GAAAAGTAGAGTGTGTAACG+CGG | 0.729474 | 8_3:-47471933 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AACTTTTTAAATCTTGAAAA+GGG | - | chr8_3:47472238-47472257 | None:intergenic | 15.0% |
| !! | ATTTATAGAAAATTCACTAT+TGG | + | chr8_3:47474736-47474755 | Msa1291890:intron | 15.0% |
| !! | TTTATAGAAAATTCACTATT+GGG | + | chr8_3:47474737-47474756 | Msa1291890:intron | 15.0% |
| !! | TATTCATATAAATGTAGAAA+AGG | - | chr8_3:47474831-47474850 | None:intergenic | 15.0% |
| !! | AACACATTAAAAAGAAAAAA+AGG | - | chr8_3:47474986-47475005 | None:intergenic | 15.0% |
| !!! | TATTTTTATTGCAATTTTCT+TGG | + | chr8_3:47475270-47475289 | Msa1291890:three_prime_UTR | 15.0% |
| !!! | ATTTTTATTGCAATTTTCTT+GGG | + | chr8_3:47475271-47475290 | Msa1291890:three_prime_UTR | 15.0% |
| !! | GATTTAAATTGAAAATTCAT+AGG | - | chr8_3:47475358-47475377 | None:intergenic | 15.0% |
| !! | GTGTTACATTTAAAGAAATA+CGG | - | chr8_3:47472073-47472092 | None:intergenic | 20.0% |
| !!! | CAACTTTTTAAATCTTGAAA+AGG | - | chr8_3:47472239-47472258 | None:intergenic | 20.0% |
| !!! | AATTCTTTTATACCTTAACT+TGG | + | chr8_3:47472664-47472683 | Msa1291890:intron | 20.0% |
| !! | CTGGTTTAAATTTATTATCA+TGG | + | chr8_3:47473223-47473242 | Msa1291890:intron | 20.0% |
| !!! | TAGTTTTGAATGAAAGTTAA+TGG | + | chr8_3:47473342-47473361 | Msa1291890:intron | 20.0% |
| !! | AATATTTATTCTGATTTCTG+AGG | + | chr8_3:47473386-47473405 | Msa1291890:intron | 20.0% |
| !! | ATCACTTTGAATTAGTATTT+AGG | + | chr8_3:47473667-47473686 | Msa1291890:intron | 20.0% |
| !!! | TTGTAAAAAATAAGCCTTAT+AGG | + | chr8_3:47473723-47473742 | Msa1291890:intron | 20.0% |
| !! | ATTATCAAAAAACTTCTTGA+AGG | - | chr8_3:47474562-47474581 | None:intergenic | 20.0% |
| !!! | AAATTATTATTTTGCTCCTA+TGG | + | chr8_3:47474765-47474784 | Msa1291890:intron | 20.0% |
| !!! | TTCTTTTTAATGTGTTATTC+TGG | + | chr8_3:47474990-47475009 | Msa1291890:intron | 20.0% |
| ! | TCTATAAGCTTACTAAGTAT+AGG | - | chr8_3:47471983-47472002 | None:intergenic | 25.0% |
| ! | TTACATTTAAAGAAATACGG+TGG | - | chr8_3:47472070-47472089 | None:intergenic | 25.0% |
| !! | ACTTGAAAATTGTTTTCTTG+CGG | - | chr8_3:47472137-47472156 | None:intergenic | 25.0% |
| ! | TATTGTTAAATTGGTAAGTG+TGG | - | chr8_3:47472323-47472342 | None:intergenic | 25.0% |
| ! | GTTCGATTGTATTGTTAAAT+TGG | - | chr8_3:47472332-47472351 | None:intergenic | 25.0% |
| !! | AAAGAAAAAGTACAAAGACT+TGG | - | chr8_3:47472394-47472413 | None:intergenic | 25.0% |
| !!! | CTTTGTACTTTTTCTTTTAC+CGG | + | chr8_3:47472397-47472416 | Msa1291890:CDS | 25.0% |
| ! | TTAACTCATATACTCTGTTA+TGG | - | chr8_3:47472594-47472613 | None:intergenic | 25.0% |
| !! | AAAATGAGACAATTTTCAGA+TGG | + | chr8_3:47472949-47472968 | Msa1291890:CDS | 25.0% |
| ! | GTCATTAACTAGATTGTAAA+AGG | + | chr8_3:47473120-47473139 | Msa1291890:exon | 25.0% |
| ! | TTAAGAGAGATTCTTTAGTT+TGG | + | chr8_3:47473164-47473183 | Msa1291890:intron | 25.0% |
| ! | AAAGAAAACAGAAACATAGT+AGG | - | chr8_3:47473196-47473215 | None:intergenic | 25.0% |
| !!! | TCTGTTTTCTTTGTTTTTTC+TGG | + | chr8_3:47473204-47473223 | Msa1291890:intron | 25.0% |
| !! | TTTTGAATGAAAGTTAATGG+CGG | + | chr8_3:47473345-47473364 | Msa1291890:intron | 25.0% |
| ! | AAGATTATAGTTGAGTGAAA+AGG | + | chr8_3:47473415-47473434 | Msa1291890:intron | 25.0% |
| !!! | ATAAAGTTTTTTCACAAGTG+AGG | - | chr8_3:47473623-47473642 | None:intergenic | 25.0% |
| !!! | AAGGCTTATTTTTTACAAGT+TGG | - | chr8_3:47473721-47473740 | None:intergenic | 25.0% |
| ! | AAAAAAAAATGTTGAAGTGC+AGG | + | chr8_3:47473782-47473801 | Msa1291890:intron | 25.0% |
| !! | TCAAAACTTTTCTTTTTCCA+AGG | + | chr8_3:47473826-47473845 | Msa1291890:intron | 25.0% |
| !! | CAAAACTTTTCTTTTTCCAA+GGG | + | chr8_3:47473827-47473846 | Msa1291890:intron | 25.0% |
| ! | TAAACTTTATAACAAACCCT+TGG | - | chr8_3:47473846-47473865 | None:intergenic | 25.0% |
| ! | TCAACTATAAAGACTACTAT+GGG | - | chr8_3:47473879-47473898 | None:intergenic | 25.0% |
| ! | ATCAACTATAAAGACTACTA+TGG | - | chr8_3:47473880-47473899 | None:intergenic | 25.0% |
| ! | TCTATAAATGATTAGTACAC+TGG | - | chr8_3:47474725-47474744 | None:intergenic | 25.0% |
| ! | AAAATGAGTAAAACATGGTA+CGG | - | chr8_3:47474794-47474813 | None:intergenic | 25.0% |
| ! | ATGTTCAATGTCAAAATTAG+AGG | - | chr8_3:47474889-47474908 | None:intergenic | 25.0% |
| ! | ATAATTAGAAGTAGTGTGAT+TGG | + | chr8_3:47475085-47475104 | Msa1291890:three_prime_UTR | 25.0% |
| ! | TTGGGTTATGTTCTAATTTA+AGG | + | chr8_3:47475289-47475308 | Msa1291890:three_prime_UTR | 25.0% |
| !!! | TGTTATTTTCAGTGTGGTTA+TGG | - | chr8_3:47471700-47471719 | None:intergenic | 30.0% |
| !!! | TGTCTTTGTTATTTTCAGTG+TGG | - | chr8_3:47471706-47471725 | None:intergenic | 30.0% |
| TATGTGAAAGAGAATGCAAT+CGG | - | chr8_3:47471744-47471763 | None:intergenic | 30.0% | |
| !!! | TTTAAGAGTTTTGAAGTGTG+TGG | - | chr8_3:47471864-47471883 | None:intergenic | 30.0% |
| ! | GTTTTACAAAATTCGTGTCT+CGG | + | chr8_3:47471885-47471904 | Msa1291890:CDS | 30.0% |
| ! | TTTTACAAAATTCGTGTCTC+GGG | + | chr8_3:47471886-47471905 | Msa1291890:CDS | 30.0% |
| ATAAGCTTACTAAGTATAGG+AGG | - | chr8_3:47471980-47471999 | None:intergenic | 30.0% | |
| ! | AATTGTTTTCTTGCGGTATT+AGG | - | chr8_3:47472130-47472149 | None:intergenic | 30.0% |
| TTAACAATACAATCGAACGA+TGG | + | chr8_3:47472334-47472353 | Msa1291890:CDS | 30.0% | |
| ATTCAAAACATGCCAAGTTA+AGG | - | chr8_3:47472679-47472698 | None:intergenic | 30.0% | |
| AACTTAAAAACGACTTCACT+GGG | - | chr8_3:47472737-47472756 | None:intergenic | 30.0% | |
| AAACTTAAAAACGACTTCAC+TGG | - | chr8_3:47472738-47472757 | None:intergenic | 30.0% | |
| AACTCAACCTTCAATAAATC+AGG | - | chr8_3:47472895-47472914 | None:intergenic | 30.0% | |
| AAAAAGTCAACTATACCATC+AGG | - | chr8_3:47473069-47473088 | None:intergenic | 30.0% | |
| TCACAAATGTTAGAGAAGAA+TGG | + | chr8_3:47473452-47473471 | Msa1291890:intron | 30.0% | |
| ! | TTGCATCTTGAATCACATTT+TGG | + | chr8_3:47473644-47473663 | Msa1291890:intron | 30.0% |
| !! | TATTTAGGCATTTAGCTTGT+AGG | + | chr8_3:47473682-47473701 | Msa1291890:intron | 30.0% |
| CTTACTCACAAATACCTATA+AGG | - | chr8_3:47473740-47473759 | None:intergenic | 30.0% | |
| TCTTTATAGTTGATCATGTG+AGG | + | chr8_3:47473886-47473905 | Msa1291890:intron | 30.0% | |
| ! | AACCAAAATCAACGTTTTGA+AGG | + | chr8_3:47474213-47474232 | Msa1291890:intron | 30.0% |
| ! | CATTGCTTTGATTTAGTCAT+AGG | + | chr8_3:47474451-47474470 | Msa1291890:intron | 30.0% |
| !!! | TGTTTTAGAAAATGAATGCG+AGG | + | chr8_3:47474581-47474600 | Msa1291890:intron | 30.0% |
| TACTCAATTTGATGTACTGT+TGG | + | chr8_3:47474615-47474634 | Msa1291890:intron | 30.0% | |
| ACTGTTGGATCATAATATGT+TGG | + | chr8_3:47474630-47474649 | Msa1291890:intron | 30.0% | |
| GATTAGTACACTGGTAATAT+AGG | - | chr8_3:47474716-47474735 | None:intergenic | 30.0% | |
| ! | GTACCATGTTTTACTCATTT+TGG | + | chr8_3:47474793-47474812 | Msa1291890:intron | 30.0% |
| TGACCAAAATGAGTAAAACA+TGG | - | chr8_3:47474799-47474818 | None:intergenic | 30.0% | |
| AATTGGAAACACATTTCCTT+GGG | - | chr8_3:47475111-47475130 | None:intergenic | 30.0% | |
| ATGTGAAAGAGAATGCAATC+GGG | - | chr8_3:47471743-47471762 | None:intergenic | 35.0% | |
| GGAAAGAATGGTAGTTTGAA+CGG | - | chr8_3:47471792-47471811 | None:intergenic | 35.0% | |
| GTGTGTGGAGTTTAATCTAA+GGG | - | chr8_3:47471849-47471868 | None:intergenic | 35.0% | |
| AGTGTGTGGAGTTTAATCTA+AGG | - | chr8_3:47471850-47471869 | None:intergenic | 35.0% | |
| !! | TACACACTCTACTTTTCAAC+CGG | + | chr8_3:47471939-47471958 | Msa1291890:CDS | 35.0% |
| TCACAAAGATATCTAACCGT+TGG | - | chr8_3:47472027-47472046 | None:intergenic | 35.0% | |
| GATATCTTTGTGAGATGTGA+CGG | + | chr8_3:47472034-47472053 | Msa1291890:CDS | 35.0% | |
| TTTCTTGCGGTATTAGGTAT+TGG | - | chr8_3:47472124-47472143 | None:intergenic | 35.0% | |
| !! | TTCAAGTTGCATGACTTTAC+CGG | + | chr8_3:47472150-47472169 | Msa1291890:CDS | 35.0% |
| CAACAACTTGACAATTCTCA+AGG | - | chr8_3:47472273-47472292 | None:intergenic | 35.0% | |
| GTGCTTGATATGCAAAACTT+TGG | - | chr8_3:47472301-47472320 | None:intergenic | 35.0% | |
| AATCCTCTTGAGATACTCTT+TGG | + | chr8_3:47472421-47472440 | Msa1291890:CDS | 35.0% | |
| ATCCTCTTGAGATACTCTTT+GGG | + | chr8_3:47472422-47472441 | Msa1291890:CDS | 35.0% | |
| ! | TTCCTTCAGTTTTGCTTAGT+TGG | + | chr8_3:47472509-47472528 | Msa1291890:CDS | 35.0% |
| ! | GTTTTCTGCCATCAAATCAT+TGG | + | chr8_3:47472540-47472559 | Msa1291890:CDS | 35.0% |
| ACCATCATCCTTCATTTCTT+AGG | + | chr8_3:47472855-47472874 | Msa1291890:intron | 35.0% | |
| ACCTAAGAAATGAAGGATGA+TGG | - | chr8_3:47472859-47472878 | None:intergenic | 35.0% | |
| CTTCAATAAATCAGGAACCA+TGG | - | chr8_3:47472887-47472906 | None:intergenic | 35.0% | |
| CATGGTTCCTGATTTATTGA+AGG | + | chr8_3:47472885-47472904 | Msa1291890:CDS | 35.0% | |
| ! | AATTTTCAGATGGCTTATCC+AGG | + | chr8_3:47472959-47472978 | Msa1291890:CDS | 35.0% |
| ACACATTCATCTATACCTGA+TGG | + | chr8_3:47473051-47473070 | Msa1291890:CDS | 35.0% | |
| ! | ATGACATCAACTTTTGCTGA+AGG | - | chr8_3:47473105-47473124 | None:intergenic | 35.0% |
| AAACATGTACAATCTACGCA+AGG | - | chr8_3:47473262-47473281 | None:intergenic | 35.0% | |
| TTATGTGGATGCTCTATATC+AGG | + | chr8_3:47473309-47473328 | Msa1291890:intron | 35.0% | |
| !! | TATTCTGATTTCTGAGGTCA+AGG | + | chr8_3:47473392-47473411 | Msa1291890:intron | 35.0% |
| GTAGTACATGTGATTCAAGA+TGG | - | chr8_3:47473539-47473558 | None:intergenic | 35.0% | |
| ! | CATGTACTACTAGTCTAGTT+TGG | + | chr8_3:47473549-47473568 | Msa1291890:intron | 35.0% |
| ! | AAGACTACTATGGGTTTGTT+TGG | - | chr8_3:47473870-47473889 | None:intergenic | 35.0% |
| TTATAGTTGATCATGTGAGG+AGG | + | chr8_3:47473889-47473908 | Msa1291890:intron | 35.0% | |
| TATAGTTGATCATGTGAGGA+GGG | + | chr8_3:47473890-47473909 | Msa1291890:intron | 35.0% | |
| TTGAGCTTATTTCCCCTATT+TGG | - | chr8_3:47473933-47473952 | None:intergenic | 35.0% | |
| AAATAGGGGAAATAAGCTCA+AGG | + | chr8_3:47473932-47473951 | Msa1291890:intron | 35.0% | |
| AGGAAACAATTCAAGAAGAG+TGG | + | chr8_3:47473972-47473991 | Msa1291890:intron | 35.0% | |
| GGAAACAATTCAAGAAGAGT+GGG | + | chr8_3:47473973-47473992 | Msa1291890:intron | 35.0% | |
| GAAACAATTCAAGAAGAGTG+GGG | + | chr8_3:47473974-47473993 | Msa1291890:intron | 35.0% | |
| ! | GATGTTGATTATGCAAAGGA+TGG | + | chr8_3:47473996-47474015 | Msa1291890:intron | 35.0% |
| ATCCAGTGAGAAACAAAAGA+AGG | + | chr8_3:47474068-47474087 | Msa1291890:intron | 35.0% | |
| !! | ATCCTTCTTTTGTTTCTCAC+TGG | - | chr8_3:47474073-47474092 | None:intergenic | 35.0% |
| !!! | CACCTTCAAAACGTTGATTT+TGG | - | chr8_3:47474218-47474237 | None:intergenic | 35.0% |
| CTCATTGTTCATGCTTCAAA+AGG | - | chr8_3:47474280-47474299 | None:intergenic | 35.0% | |
| !!! | CTTTTGAAGCATGAACAATG+AGG | + | chr8_3:47474278-47474297 | Msa1291890:intron | 35.0% |
| ATCTCAAAGTGAAGAAGTCA+AGG | + | chr8_3:47474405-47474424 | Msa1291890:intron | 35.0% | |
| TCGTAAACCAAATCAATGAG+TGG | - | chr8_3:47474495-47474514 | None:intergenic | 35.0% | |
| ATACCTCAAGTTCAAGAAAG+TGG | + | chr8_3:47474520-47474539 | Msa1291890:intron | 35.0% | |
| GAATATGATTGTCTCAGTCT+CGG | + | chr8_3:47474846-47474865 | Msa1291890:intron | 35.0% | |
| AGAGAGAAATACGCTATTAC+CGG | - | chr8_3:47474919-47474938 | None:intergenic | 35.0% | |
| CAATTGGAAACACATTTCCT+TGG | - | chr8_3:47475112-47475131 | None:intergenic | 35.0% | |
| AAGCAACTAAAGAAATGCAG+AGG | + | chr8_3:47475184-47475203 | Msa1291890:three_prime_UTR | 35.0% | |
| CTACCATTCTTTCCACAAGA+TGG | + | chr8_3:47471798-47471817 | Msa1291890:CDS | 40.0% | |
| GTTCCATCTTGTGGAAAGAA+TGG | - | chr8_3:47471804-47471823 | None:intergenic | 40.0% | |
| GAAAAGTAGAGTGTGTAACG+CGG | - | chr8_3:47471936-47471955 | None:intergenic | 40.0% | |
| !! | ACTCTACTTTTCAACCGGAA+AGG | + | chr8_3:47471944-47471963 | Msa1291890:CDS | 40.0% |
| !! | TAGGTATTGGAGTACTAGAG+AGG | - | chr8_3:47472111-47472130 | None:intergenic | 40.0% |
| AGAGACAAGCTAGTTAATGC+CGG | - | chr8_3:47472172-47472191 | None:intergenic | 40.0% | |
| ! | TAACTAGCTTGTCTCTACGA+TGG | + | chr8_3:47472176-47472195 | Msa1291890:CDS | 40.0% |
| ! | ATACAATCGAACGATGGACT+TGG | + | chr8_3:47472340-47472359 | Msa1291890:CDS | 40.0% |
| GAGTATCTCAAGAGGATTAC+CGG | - | chr8_3:47472419-47472438 | None:intergenic | 40.0% | |
| CGTGTTCAATAGACGAAAGA+CGG | - | chr8_3:47472450-47472469 | None:intergenic | 40.0% | |
| ! | GCATTGACGTAAATGTAGCT+TGG | + | chr8_3:47472473-47472492 | Msa1291890:CDS | 40.0% |
| AGCCAACTAAGCAAAACTGA+AGG | - | chr8_3:47472514-47472533 | None:intergenic | 40.0% | |
| TTCTGCCATCAAATCATTGG+TGG | + | chr8_3:47472543-47472562 | Msa1291890:CDS | 40.0% | |
| AGAGACCACCAATGATTTGA+TGG | - | chr8_3:47472551-47472570 | None:intergenic | 40.0% | |
| TAAAAACGACTTCACTGGGT+CGG | - | chr8_3:47472733-47472752 | None:intergenic | 40.0% | |
| ! | AAGTCTTATCCCACTAAGTG+GGG | - | chr8_3:47472772-47472791 | None:intergenic | 40.0% |
| ! | CAAGTCTTATCCCACTAAGT+GGG | - | chr8_3:47472773-47472792 | None:intergenic | 40.0% |
| ! | AAGACTTGGTTGTTGGTTGT+TGG | + | chr8_3:47472785-47472804 | Msa1291890:intron | 40.0% |
| GGAGAGAACCTAAGAAATGA+AGG | - | chr8_3:47472866-47472885 | None:intergenic | 40.0% | |
| CATTTCTTAGGTTCTCTCCA+TGG | + | chr8_3:47472867-47472886 | Msa1291890:intron | 40.0% | |
| ! | CAGCGACTTCAAGTTACATA+AGG | - | chr8_3:47472923-47472942 | None:intergenic | 40.0% |
| GGAAAGCAGTTGTGATAAGT+TGG | - | chr8_3:47472998-47473017 | None:intergenic | 40.0% | |
| ACTTATCACAACTGCTTTCC+AGG | + | chr8_3:47472998-47473017 | Msa1291890:CDS | 40.0% | |
| TTTAAACGCTTCCTCTAACC+TGG | - | chr8_3:47473019-47473038 | None:intergenic | 40.0% | |
| !! | AGGTTAGAGGAAGCGTTTAA+AGG | + | chr8_3:47473018-47473037 | Msa1291890:CDS | 40.0% |
| !! | TAGAGGAAGCGTTTAAAGGA+AGG | + | chr8_3:47473022-47473041 | Msa1291890:CDS | 40.0% |
| GTATCCAGTCTAGACTTATG+TGG | + | chr8_3:47473294-47473313 | Msa1291890:intron | 40.0% | |
| TGGATGCTCTATATCAGGAT+TGG | + | chr8_3:47473314-47473333 | Msa1291890:intron | 40.0% | |
| GAATGAAAGTTAATGGCGGT+TGG | + | chr8_3:47473349-47473368 | Msa1291890:intron | 40.0% | |
| ! | AAAGTTAATGGCGGTTGGTT+TGG | + | chr8_3:47473354-47473373 | Msa1291890:intron | 40.0% |
| AGGTGTGGAATGTTGACAAT+AGG | + | chr8_3:47473952-47473971 | Msa1291890:intron | 40.0% | |
| ! | TGGGGATGTTGATTATGCAA+AGG | + | chr8_3:47473992-47474011 | Msa1291890:intron | 40.0% |
| CTCACATGTCATGTGAGAAT+TGG | - | chr8_3:47474165-47474184 | None:intergenic | 40.0% | |
| TGAGACAAATAAACCAGCGA+AGG | + | chr8_3:47474181-47474200 | Msa1291890:intron | 40.0% | |
| !!! | GTTTTGAAGGTGTTAACCTC+CGG | + | chr8_3:47474226-47474245 | Msa1291890:intron | 40.0% |
| ATTCCAAACTCCGGATAACT+AGG | - | chr8_3:47474254-47474273 | None:intergenic | 40.0% | |
| ! | AAAAGGTCGATTCCAAACTC+CGG | - | chr8_3:47474263-47474282 | None:intergenic | 40.0% |
| GAACGTAGTTGTTTACACTG+AGG | - | chr8_3:47474343-47474362 | None:intergenic | 40.0% | |
| ! | TGTGTGTCCACTCATTGATT+TGG | + | chr8_3:47474485-47474504 | Msa1291890:intron | 40.0% |
| CTACCACTTTCTTGAACTTG+AGG | - | chr8_3:47474526-47474545 | None:intergenic | 40.0% | |
| AAACATGGTACGGAAACCAT+AGG | - | chr8_3:47474784-47474803 | None:intergenic | 40.0% | |
| ! | GTCTCGGTTTTTATTGCTGT+TGG | + | chr8_3:47474862-47474881 | Msa1291890:intron | 40.0% |
| GACATTGAACATACTGCTTC+CGG | + | chr8_3:47474897-47474916 | Msa1291890:intron | 40.0% | |
| ACTAGTTCATAGAGCTGAAC+TGG | + | chr8_3:47475042-47475061 | Msa1291890:intron | 40.0% | |
| ACACTCTCTTTCTCTGCAAT+TGG | - | chr8_3:47475128-47475147 | None:intergenic | 40.0% | |
| TCTCTCTCTTTCTCTGCAAT+TGG | - | chr8_3:47475153-47475172 | None:intergenic | 40.0% | |
| ! | GGCGTGTTTGGTTTCTAAAG+AGG | - | chr8_3:47471771-47471790 | None:intergenic | 45.0% |
| CCAGAGATTGTTCCATCTTG+TGG | - | chr8_3:47471813-47471832 | None:intergenic | 45.0% | |
| CCACAAGATGGAACAATCTC+TGG | + | chr8_3:47471810-47471829 | Msa1291890:CDS | 45.0% | |
| TTTCAACCGGAAAGGTTCTG+TGG | + | chr8_3:47471952-47471971 | Msa1291890:CDS | 45.0% | |
| CTGCTTCACACAATGTCCAA+CGG | + | chr8_3:47472008-47472027 | Msa1291890:CDS | 45.0% | |
| ! | CTACGATGGTTTTCCTTTCG+CGG | + | chr8_3:47472190-47472209 | Msa1291890:CDS | 45.0% |
| TCCTTTCGCGGTAACAATAG+TGG | + | chr8_3:47472202-47472221 | Msa1291890:CDS | 45.0% | |
| ATCTTGAAAAGGGCTCAGCA+CGG | - | chr8_3:47472228-47472247 | None:intergenic | 45.0% | |
| !!! | GATGGACTTGGTGACTTTTG+CGG | + | chr8_3:47472352-47472371 | Msa1291890:CDS | 45.0% |
| !! | CTCCCAAAGAGTATCTCAAG+AGG | - | chr8_3:47472427-47472446 | None:intergenic | 45.0% |
| GGTCTCTTCAACTACTCTTC+AGG | + | chr8_3:47472564-47472583 | Msa1291890:CDS | 45.0% | |
| ! | CCAAGTCTTATCCCACTAAG+TGG | - | chr8_3:47472774-47472793 | None:intergenic | 45.0% |
| CCACTTAGTGGGATAAGACT+TGG | + | chr8_3:47472771-47472790 | Msa1291890:intron | 45.0% | |
| ! | GTGGGATAAGACTTGGTTGT+TGG | + | chr8_3:47472778-47472797 | Msa1291890:intron | 45.0% |
| ! | CTTATCCAGGTCGTTGATAG+AGG | + | chr8_3:47472972-47472991 | Msa1291890:CDS | 45.0% |
| ACAACTGCTTTCCAGGTTAG+AGG | + | chr8_3:47473005-47473024 | Msa1291890:CDS | 45.0% | |
| GCATCCACATAAGTCTAGAC+TGG | - | chr8_3:47473301-47473320 | None:intergenic | 45.0% | |
| CGCACACACACATACTTTCA+TGG | - | chr8_3:47473490-47473509 | None:intergenic | 45.0% | |
| TTGATCATGTGAGGAGGGAT+TGG | + | chr8_3:47473895-47473914 | Msa1291890:intron | 45.0% | |
| TGATCATGTGAGGAGGGATT+GGG | + | chr8_3:47473896-47473915 | Msa1291890:intron | 45.0% | |
| AACTCCGGATAACTAGGAAC+CGG | - | chr8_3:47474248-47474267 | None:intergenic | 45.0% | |
| GTTCCTAGTTATCCGGAGTT+TGG | + | chr8_3:47474248-47474267 | Msa1291890:intron | 45.0% | |
| GCTGAACTGGTAGAGAATCA+AGG | + | chr8_3:47475055-47475074 | Msa1291890:three_prime_UTR | 45.0% | |
| GGTAGTTTGAACGGCGTGTT+TGG | - | chr8_3:47471783-47471802 | None:intergenic | 50.0% | |
| GCCACTATTGTTACCGCGAA+AGG | - | chr8_3:47472206-47472225 | None:intergenic | 50.0% | |
| AAGTAGTCGACCCCACTTAG+TGG | + | chr8_3:47472759-47472778 | Msa1291890:intron | 50.0% | |
| AGTAGTCGACCCCACTTAGT+GGG | + | chr8_3:47472760-47472779 | Msa1291890:intron | 50.0% | |
| GATCATGTGAGGAGGGATTG+GGG | + | chr8_3:47473897-47473916 | Msa1291890:intron | 50.0% | |
| TTCCCCTATTTGGCACCAAC+TGG | - | chr8_3:47473923-47473942 | None:intergenic | 50.0% | |
| GGGGAAATAAGCTCAAGGTG+TGG | + | chr8_3:47473937-47473956 | Msa1291890:intron | 50.0% | |
| !! | GGTTTTGTGCTTTCCTTCGC+TGG | - | chr8_3:47474197-47474216 | None:intergenic | 50.0% |
| ACCTCCGGTTCCTAGTTATC+CGG | + | chr8_3:47474241-47474260 | Msa1291890:intron | 50.0% | |
| ! | GAAGTAGTGTGATTGGCCCA+AGG | + | chr8_3:47475092-47475111 | Msa1291890:three_prime_UTR | 50.0% |
| GAGGCTCCACAGAACCTTTC+CGG | - | chr8_3:47471961-47471980 | None:intergenic | 55.0% | |
| ! | GTTGGCCTCTATCAACGACC+TGG | - | chr8_3:47472980-47472999 | None:intergenic | 55.0% |
| !! | GGGCCAGTTGGTGCCAAATA+GGG | + | chr8_3:47473917-47473936 | Msa1291890:intron | 55.0% |
| !! | GGCCAGTTGGTGCCAAATAG+GGG | + | chr8_3:47473918-47473937 | Msa1291890:intron | 55.0% |
| TCCGGATAACTAGGAACCGG+AGG | - | chr8_3:47474245-47474264 | None:intergenic | 55.0% | |
| !! | GGGGCCAGTTGGTGCCAAAT+AGG | + | chr8_3:47473916-47473935 | Msa1291890:intron | 60.0% |
| GAGGAGGGATTGGGGCCAGT+TGG | + | chr8_3:47473905-47473924 | Msa1291890:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 47471674 | 47475388 | 47471674 | ID=Msa1291890;Name=Msa1291890 |
| chr8_3 | mRNA | 47471674 | 47475388 | 47471674 | ID=Msa1291890-mRNA-1;Parent=Msa1291890;Name=Msa1291890-mRNA-1;_AED=0.41;_eAED=0.41;_QI=0|0.5|0.66|0.66|0.5|0.33|3|352|388 |
| chr8_3 | exon | 47471674 | 47472585 | 47471674 | ID=Msa1291890-mRNA-1:exon:13211;Parent=Msa1291890-mRNA-1 |
| chr8_3 | exon | 47472877 | 47473141 | 47472877 | ID=Msa1291890-mRNA-1:exon:13212;Parent=Msa1291890-mRNA-1 |
| chr8_3 | exon | 47475047 | 47475388 | 47475047 | ID=Msa1291890-mRNA-1:exon:13213;Parent=Msa1291890-mRNA-1 |
| chr8_3 | CDS | 47471674 | 47472585 | 47471674 | ID=Msa1291890-mRNA-1:cds;Parent=Msa1291890-mRNA-1 |
| chr8_3 | CDS | 47472877 | 47473131 | 47472877 | ID=Msa1291890-mRNA-1:cds;Parent=Msa1291890-mRNA-1 |
| chr8_3 | three_prime_UTR | 47473132 | 47473141 | 47473132 | ID=Msa1291890-mRNA-1:three_prime_utr;Parent=Msa1291890-mRNA-1 |
| chr8_3 | three_prime_UTR | 47475047 | 47475388 | 47475047 | ID=Msa1291890-mRNA-1:three_prime_utr;Parent=Msa1291890-mRNA-1 |
| Gene Sequence |
| Protein sequence |
