AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0138630

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0138630 MtrunA17_Chr1g0155141 97.163 705 16 3 1 705 1 701 0.0 1412
Msa0138630 MtrunA17_Chr3g0130381 50.284 529 241 5 197 705 252 778 0.0 592
Msa0138630 MtrunA17_Chr8g0384431 43.425 654 328 10 58 683 147 786 0.0 570
Msa0138630 MtrunA17_Chr3g0125511 41.015 729 376 13 13 705 34 744 0.0 564
Msa0138630 MtrunA17_Chr8g0372471 45.594 522 265 7 200 705 374 892 6.05e-175 523
Msa0138630 MtrunA17_Chr5g0437501 42.703 555 290 9 172 705 60 607 1.11e-159 474
Msa0138630 MtrunA17_Chr3g0113981 43.585 530 269 11 195 705 152 670 1.84e-149 450
Msa0138630 MtrunA17_Chr1g0159741 42.574 505 254 13 203 682 141 634 8.38e-123 380
Msa0138630 MtrunA17_Chr3g0112341 40.079 509 268 14 202 686 152 647 1.46e-120 375
Msa0138630 MtrunA17_Chr5g0435751 39.489 509 251 15 202 686 124 599 7.09e-110 346
Msa0138630 MtrunA17_Chr8g0369481 36.832 524 286 14 212 703 78 588 2.90e-107 338
Msa0138630 MtrunA17_Chr5g0409411 36.122 526 291 14 212 705 80 592 4.45e-106 335
Msa0138630 MtrunA17_Chr1g0167381 35.135 592 323 16 162 703 35 615 1.71e-105 334
Msa0138630 MtrunA17_Chr1g0183721 38.277 499 274 11 231 703 95 585 3.30e-105 333
Msa0138630 MtrunA17_Chr6g0472571 37.266 534 281 17 208 703 109 626 2.54e-104 332
Msa0138630 MtrunA17_Chr5g0404761 49.643 280 124 5 437 705 1 274 9.13e-102 313
Msa0138630 MtrunA17_Chr1g0187601 34.906 530 306 11 205 703 93 614 5.20e-100 320
Msa0138630 MtrunA17_Chr1g0203741 37.547 530 277 17 214 703 102 617 1.85e-99 319
Msa0138630 MtrunA17_Chr8g0350391 36.075 535 286 17 210 703 111 630 8.18e-99 317
Msa0138630 MtrunA17_Chr8g0388881 35.104 527 291 16 214 703 108 620 2.10e-97 313
Msa0138630 MtrunA17_Chr4g0055031 35.393 534 296 16 203 703 86 603 3.30e-95 307
Msa0138630 MtrunA17_Chr7g0214551 35.673 513 287 15 203 683 43 544 8.43e-95 305
Msa0138630 MtrunA17_Chr8g0350351 35.471 499 281 13 231 703 117 600 9.58e-94 303
Msa0138630 MtrunA17_Chr7g0246701 34.848 528 293 16 214 703 111 625 1.61e-92 301
Msa0138630 MtrunA17_Chr8g0361791 33.026 542 312 16 196 703 76 600 5.46e-90 293
Msa0138630 MtrunA17_Chr7g0246681 34.400 500 287 14 231 704 104 588 6.32e-89 290
Msa0138630 MtrunA17_Chr3g0092501 34.351 524 291 17 213 703 94 597 6.93e-87 285
Msa0138630 MtrunA17_Chr5g0416991 33.146 534 306 15 203 703 84 599 7.06e-86 282
Msa0138630 MtrunA17_Chr1g0171781 32.432 518 312 12 214 703 96 603 1.19e-85 281
Msa0138630 MtrunA17_Chr5g0426281 31.295 556 303 18 202 704 142 671 4.32e-78 263
Msa0138630 MtrunA17_Chr5g0404771 35.309 405 238 7 38 425 147 544 2.00e-72 245
Msa0138630 MtrunA17_Chr3g0115931 31.346 520 298 19 213 686 163 669 5.30e-72 247
Msa0138630 MtrunA17_Chr4g0043131 51.748 143 63 4 563 700 39 180 2.13e-37 138
Msa0138630 MtrunA17_Chr4g0043121 26.433 314 203 10 209 502 91 396 6.61e-34 135
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0138630 AT1G19430.1 62.256 718 255 4 1 705 10 724 0.0 931
Msa0138630 AT1G19430.3 62.256 718 255 4 1 705 10 724 0.0 931
Msa0138630 AT1G19430.2 58.844 588 226 4 1 575 10 594 0.0 706
Msa0138630 AT5G64030.1 42.183 678 356 8 50 705 155 818 0.0 585
Msa0138630 AT1G29470.1 40.999 761 374 17 8 705 11 759 0.0 571
Msa0138630 AT1G29470.2 40.999 761 374 17 8 705 11 759 0.0 571
Msa0138630 AT2G34300.2 39.414 751 400 8 8 705 11 759 0.0 570
Msa0138630 AT2G34300.3 39.414 751 400 8 8 705 11 759 0.0 570
Msa0138630 AT2G34300.1 39.414 751 400 8 8 705 11 759 0.0 570
Msa0138630 AT3G51070.1 47.036 523 255 6 203 705 371 891 0.0 560
Msa0138630 AT3G51070.2 47.289 461 222 5 203 643 371 830 7.17e-165 495
Msa0138630 AT2G40280.1 45.455 517 257 12 202 705 79 583 5.39e-154 459
Msa0138630 AT3G56080.1 43.436 518 264 12 203 705 107 610 6.84e-147 441
Msa0138630 AT3G56080.2 43.488 453 232 9 203 640 107 550 3.76e-130 396
Msa0138630 AT5G06050.1 39.153 567 307 18 143 686 92 643 3.91e-126 390
Msa0138630 AT2G39750.1 40.472 509 266 14 202 686 176 671 9.01e-123 382
Msa0138630 AT1G77260.1 39.200 500 275 14 202 682 142 631 3.03e-116 363
Msa0138630 AT4G19120.1 36.260 524 291 13 212 703 78 590 1.34e-106 337
Msa0138630 AT4G19120.2 36.260 524 291 13 212 703 78 590 1.34e-106 337
Msa0138630 AT1G31850.1 34.733 524 299 12 212 703 84 596 2.80e-106 336
Msa0138630 AT1G31850.2 34.733 524 299 12 212 703 84 596 2.80e-106 336
Msa0138630 AT1G31850.4 34.733 524 299 12 212 703 84 596 2.80e-106 336
Msa0138630 AT1G31850.3 34.733 524 299 12 212 703 84 596 2.80e-106 336
Msa0138630 AT4G14360.1 36.382 503 288 11 205 683 78 572 2.82e-102 326
Msa0138630 AT4G14360.2 36.382 503 288 11 205 683 78 572 2.82e-102 326
Msa0138630 AT3G23300.2 35.539 529 303 12 205 703 81 601 3.78e-101 323
Msa0138630 AT3G23300.1 35.539 529 303 12 205 703 81 601 3.78e-101 323
Msa0138630 AT1G04430.1 36.634 505 284 13 205 683 86 580 3.99e-100 321
Msa0138630 AT1G04430.3 36.634 505 284 13 205 683 86 580 3.99e-100 321
Msa0138630 AT1G04430.2 36.634 505 284 13 205 683 86 580 3.99e-100 321
Msa0138630 AT1G33170.1 34.414 555 306 15 195 703 92 634 9.29e-99 317
Msa0138630 AT4G10440.1 34.594 529 300 14 210 703 99 616 9.48e-98 315
Msa0138630 AT4G00740.1 36.200 500 278 15 231 704 110 594 1.70e-97 313
Msa0138630 AT4G00740.2 36.200 500 278 15 231 704 110 594 1.70e-97 313
Msa0138630 AT2G45750.1 34.146 533 294 16 214 703 97 615 4.58e-95 308
Msa0138630 AT5G04060.1 35.685 496 278 13 233 703 118 597 1.30e-93 303
Msa0138630 AT5G14430.1 35.084 533 302 13 205 703 82 604 5.04e-92 299
Msa0138630 AT2G43200.2 35.283 513 289 14 213 696 100 598 1.11e-91 298
Msa0138630 AT2G43200.1 35.283 513 289 14 213 696 100 598 1.11e-91 298
Msa0138630 AT4G00750.1 34.270 534 290 18 214 703 106 622 5.27e-91 297
Msa0138630 AT3G10200.1 33.525 522 302 13 207 703 87 588 2.10e-90 294
Msa0138630 AT5G14430.2 34.709 533 304 13 205 703 82 604 2.16e-90 295
Msa0138630 AT4G18030.1 33.771 533 307 15 203 703 85 603 8.82e-90 293
Msa0138630 AT1G26850.2 32.965 543 296 19 206 703 89 608 3.81e-86 283
Msa0138630 AT1G26850.1 32.965 543 296 19 206 703 89 608 3.81e-86 283
Msa0138630 AT3G10200.2 34.395 471 269 12 207 657 87 537 1.76e-83 276
Msa0138630 AT4G19120.3 35.335 433 239 12 212 614 78 499 5.85e-79 261
Msa0138630 AT1G78240.1 30.639 532 309 16 202 686 142 660 6.67e-74 253
Msa0138630 AT1G78240.2 30.639 532 309 16 202 686 142 660 6.67e-74 253
Msa0138630 AT1G13860.4 31.238 541 303 17 209 704 86 602 2.85e-73 249
Msa0138630 AT1G13860.3 31.238 541 303 17 209 704 86 602 2.85e-73 249
Msa0138630 AT1G13860.1 31.238 541 303 17 209 704 86 602 2.85e-73 249
Msa0138630 AT1G13860.5 31.238 541 303 17 209 704 86 602 2.85e-73 249
Msa0138630 AT2G03480.2 31.609 522 305 15 209 700 91 590 4.96e-70 240
Msa0138630 AT2G03480.1 30.912 537 300 15 209 700 91 601 6.61e-69 237
Msa0138630 AT1G13860.2 32.599 454 250 13 292 704 8 446 1.37e-68 232
Msa0138630 AT1G26850.3 28.972 428 246 14 206 595 89 496 2.40e-48 178
Msa0138630 AT2G03480.3 27.760 317 195 10 209 502 91 396 3.30e-30 124

Find 160 sgRNAs with CRISPR-Local

Find 352 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATGACAGCTGTAACAATTT+TGG 0.157752 1_3:+71762310 Msa0138630:CDS
TAATCAACTTAATGTGTAAA+AGG 0.205128 1_3:+71767328 Msa0138630:three_prime_UTR
CATCGTTGGTTGGTGGATTC+TGG 0.212517 1_3:+71763822 Msa0138630:CDS
ATATTTCCTCCAATGCATTT+AGG 0.247505 1_3:-71767094 None:intergenic
ATGGTTCCTCTTCCTCTTGA+TGG 0.249826 1_3:+71762989 Msa0138630:CDS
CTCTATTTGTTGGAATGTTC+TGG 0.254507 1_3:+71765706 Msa0138630:CDS
AATCAAATGTTAACTATAGA+TGG 0.266871 1_3:+71762846 Msa0138630:CDS
CACGATTGGTGCGAGTCTTT+TGG 0.275475 1_3:+71766569 Msa0138630:CDS
TAATATATGCAGCTAGTTTC+GGG 0.294319 1_3:-71763794 None:intergenic
TTAATATATGCAGCTAGTTT+CGG 0.296241 1_3:-71763795 None:intergenic
CTCTATCTAAACATAACGTT+TGG 0.325301 1_3:+71766471 Msa0138630:CDS
TCATGAGAGTGAAGTTGATT+TGG 0.338378 1_3:+71762712 Msa0138630:CDS
TCCTGACTGGATGAACAATA+AGG 0.340719 1_3:+71766052 Msa0138630:CDS
CTAAAAGACCAACTGGGTTA+TGG 0.341620 1_3:+71762282 Msa0138630:CDS
GCTGGCATACCCTCCATAGA+TGG 0.347147 1_3:-71766183 None:intergenic
CGCAGCTGCTCTCTTCGATA+AGG 0.356939 1_3:+71764295 Msa0138630:CDS
CGATGAAGATTCTGAGATAT+TGG 0.360316 1_3:+71762775 Msa0138630:CDS
TCAATGGAATGGGCATTAAC+TGG 0.363494 1_3:+71766129 Msa0138630:CDS
CGTGCCACTTCTTTCTTATG+AGG 0.367580 1_3:-71762572 None:intergenic
TCGTATATGTCATTTCCTTC+AGG 0.373427 1_3:-71765779 None:intergenic
GAGATATGACTTGTTAACTA+TGG 0.375456 1_3:-71766108 None:intergenic
TAAAAGACCAACTGGGTTAT+GGG 0.378287 1_3:+71762283 Msa0138630:CDS
CACTGACAGCCTCTATTTGT+TGG 0.385291 1_3:+71765696 Msa0138630:CDS
ATGAAAATCCCGACGCAGTC+TGG 0.390934 1_3:+71765840 Msa0138630:CDS
AAAATTATGGGAAGCGTATC+CGG 0.395966 1_3:-71766521 None:intergenic
CGTCAAGCTAAAAGACCAAC+TGG 0.396592 1_3:+71762275 Msa0138630:CDS
AGCCTCTTCGGCCATTCCTC+AGG 0.398893 1_3:-71766020 None:intergenic
GGAAGATAAAGAAGAAGGAT+TGG 0.399828 1_3:+71762688 Msa0138630:CDS
AGTGATGATGTTGGTGAAGT+TGG 0.403680 1_3:+71765737 Msa0138630:CDS
GCATTAACTGGACAAATATC+AGG 0.404692 1_3:+71766141 Msa0138630:CDS
TCCTTATTGTTCATCCAGTC+AGG 0.410033 1_3:-71766053 None:intergenic
GGAAGTCTCCTTCTAGCAAA+AGG 0.412928 1_3:-71764407 None:intergenic
TATACCTTCAATTTGCTCTC+AGG 0.413276 1_3:-71763034 None:intergenic
TGTTTGCACACCATTCCAAT+TGG 0.418735 1_3:+71765972 Msa0138630:CDS
GAATGTGAATCAAGGGTCAT+TGG 0.427690 1_3:+71762637 Msa0138630:CDS
ATGGACATGAAATCCATCTA+TGG 0.430968 1_3:+71766170 Msa0138630:CDS
CCATGCTGTTCAATTCCAAT+TGG 0.431043 1_3:-71765987 None:intergenic
GCAGCTGCTCTCTTCGATAA+GGG 0.439107 1_3:+71764296 Msa0138630:CDS
GGAAAAGTTTCGAGCCTCTT+CGG 0.440914 1_3:-71766032 None:intergenic
TCTATCTAAACATAACGTTT+GGG 0.453133 1_3:+71766472 Msa0138630:CDS
AACTTCTACTGGAGATGAAT+CGG 0.456963 1_3:+71764615 Msa0138630:CDS
GGTATATATTAGAGGGTTCA+AGG 0.458635 1_3:-71767200 None:intergenic
TGCAGAAGGTCATAAGTTCT+TGG 0.460158 1_3:-71766599 None:intergenic
AAGGATGCCCTTCATGTGTA+TGG 0.465411 1_3:+71762970 Msa0138630:CDS
AGAGTTAAAGAAAACAAAGA+AGG 0.466174 1_3:+71762799 Msa0138630:CDS
TTCAATTTGCTCTCAGGCCA+CGG 0.468060 1_3:-71763028 None:intergenic
AATAAAGAGAATGTGAATCA+AGG 0.469706 1_3:+71762629 Msa0138630:CDS
AGCGTATCCGGTGCATGGAC+AGG 0.477410 1_3:-71766509 None:intergenic
TTGCTCTCAGGCCACGGCAC+CGG 0.477467 1_3:-71763022 None:intergenic
ATCAAGTCATGGTGGGACTC+TGG 0.478808 1_3:-71767251 None:intergenic
ATACACATGAAGGGCATCCT+TGG 0.479666 1_3:-71762968 None:intergenic
GCAAAAGGGCTAACCAATGT+TGG 0.480251 1_3:-71764392 None:intergenic
GCAGCATACCAGACTGCGTC+GGG 0.480849 1_3:-71765848 None:intergenic
AAGTCATATCTCAATGGAAT+GGG 0.482780 1_3:+71766119 Msa0138630:CDS
CCTTGCATTGATATCGAAGT+AGG 0.484188 1_3:+71762905 Msa0138630:CDS
GACAAATATCAGGAATGTAA+TGG 0.487358 1_3:+71766151 Msa0138630:CDS
GTGCCACTTCTTTCTTATGA+GGG 0.488457 1_3:-71762571 None:intergenic
AATATTGAGAAGTATGCAAT+GGG 0.493277 1_3:+71767112 Msa0138630:CDS
TTGAGATGGACCGTATCTTA+CGG 0.493909 1_3:+71767033 Msa0138630:CDS
CAAAAGGGCTAACCAATGTT+GGG 0.497358 1_3:-71764391 None:intergenic
TCTTGATGGTTATGAGTCTC+CGG 0.498170 1_3:+71763003 Msa0138630:CDS
TATGTGCACAGAAAACTCTA+TGG 0.503076 1_3:+71767174 Msa0138630:CDS
TGTTCTCACGCCTCAAAAGC+AGG 0.503114 1_3:+71766633 Msa0138630:CDS
CAATTGGAATTGAACAGCAT+GGG 0.508639 1_3:+71765988 Msa0138630:CDS
AGTTGAAATCCTAAATGCAT+TGG 0.511405 1_3:+71767085 Msa0138630:CDS
ACCCTCCTGGCCGTAAGATA+CGG 0.511729 1_3:-71767043 None:intergenic
TCAAGGGTCATTGGAGAAAG+AGG 0.512731 1_3:+71762646 Msa0138630:CDS
TTGGATTCTGATGTTGTTGG+TGG 0.513871 1_3:+71762731 Msa0138630:CDS
GATAGCATTGAAGAAGAAGA+AGG 0.514633 1_3:+71764680 Msa0138630:CDS
CAAGTCATATCTCAATGGAA+TGG 0.517713 1_3:+71766118 Msa0138630:CDS
AGAGGCTGTCAGTGCGGTCA+TGG 0.519681 1_3:-71765687 None:intergenic
GAGTTGGAAGATAAAGAAGA+AGG 0.521615 1_3:+71762683 Msa0138630:CDS
CCACTTGAGCTAAGTCCACT+AGG 0.524362 1_3:-71764352 None:intergenic
TGAAATCCTAAATGCATTGG+AGG 0.524906 1_3:+71767088 Msa0138630:CDS
GATTTGGATTCTGATGTTGT+TGG 0.526320 1_3:+71762728 Msa0138630:CDS
CAGAACATTCCAACAAATAG+AGG 0.526503 1_3:-71765705 None:intergenic
CGTATGATCGTCAACCCTCC+TGG 0.526562 1_3:-71767056 None:intergenic
TGATCGCGGACACCAACCAT+TGG 0.528068 1_3:+71766081 Msa0138630:CDS
GTGTGCAAACAAGTCTTGAT+TGG 0.528299 1_3:-71765960 None:intergenic
ATAAAGAGAATGTGAATCAA+GGG 0.529921 1_3:+71762630 Msa0138630:CDS
GTGGTGGAAAGGTGCAGTAC+CGG 0.532025 1_3:+71762927 Msa0138630:CDS
CCAATTGGAATTGAACAGCA+TGG 0.533438 1_3:+71765987 Msa0138630:CDS
GAGTTAAAGAAAACAAAGAA+GGG 0.534176 1_3:+71762800 Msa0138630:CDS
GACAACTCCTCTCCGTGTGC+CGG 0.534753 1_3:-71762946 None:intergenic
GGGCAGAGTGGCCTGAGGAA+TGG 0.534846 1_3:+71766009 Msa0138630:CDS
TCATAACCATCAAGAGGAAG+AGG 0.538678 1_3:-71762995 None:intergenic
GAAGTCTCCTTCTAGCAAAA+GGG 0.539434 1_3:-71764406 None:intergenic
TTAACATTTGATTCAAACAA+AGG 0.539982 1_3:-71762836 None:intergenic
AACTATGGCGTTCCAATGGT+TGG 0.540107 1_3:-71766093 None:intergenic
AAGAGGAACCATACACATGA+AGG 0.545446 1_3:-71762978 None:intergenic
GTTAACAAGTCATATCTCAA+TGG 0.546595 1_3:+71766113 Msa0138630:CDS
AGCATACCTTGGCATTCCAA+TGG 0.553335 1_3:+71764473 Msa0138630:CDS
AATCAGAATGACTTTCTACC+AGG 0.554059 1_3:+71767136 Msa0138630:CDS
ATTCGTGTTGTCCTGGACAT+TGG 0.555137 1_3:+71764254 Msa0138630:CDS
AGTCGAGGGAAAGAATATCA+TGG 0.558818 1_3:-71767281 None:intergenic
TGTTTGAAGAAATAGAACAT+TGG 0.560848 1_3:+71767451 Msa0138630:three_prime_UTR
ATGGACCGTATCTTACGGCC+AGG 0.560956 1_3:+71767038 Msa0138630:CDS
AATCTGTACATCCAATGTCC+AGG 0.561710 1_3:-71764265 None:intergenic
AAATATTGAGAAGTATGCAA+TGG 0.561804 1_3:+71767111 Msa0138630:CDS
TGGGAAGCGTATCCGGTGCA+TGG 0.562242 1_3:-71766514 None:intergenic
TGTTAACTATGGCGTTCCAA+TGG 0.562942 1_3:-71766097 None:intergenic
CCTAGTGGACTTAGCTCAAG+TGG 0.563137 1_3:+71764352 Msa0138630:CDS
AGATGGTACCAGACATTGAG+TGG 0.564162 1_3:+71764222 Msa0138630:intron
CGAGCGCGGCTTCCCAACAT+TGG 0.565538 1_3:+71764379 Msa0138630:CDS
GTGCACGTTGCAGCATACCT+TGG 0.566173 1_3:+71764462 Msa0138630:CDS
ACAAAGAAGGGAAAAGTGAA+AGG 0.567820 1_3:+71762812 Msa0138630:CDS
ATGACATATACGAATTGAGA+AGG 0.575466 1_3:+71765789 Msa0138630:CDS
GTGGCCTGAGAGCAAATTGA+AGG 0.576440 1_3:+71763030 Msa0138630:CDS
GAAGAAACGTGTGCATAAGA+AGG 0.577823 1_3:+71762598 Msa0138630:CDS
GAGAGATAACAATTCAATGT+GGG 0.586661 1_3:+71767483 Msa0138630:three_prime_UTR
ACAAATGATCAGCATGCAGA+AGG 0.594137 1_3:-71766613 None:intergenic
CTATCTTGAGTCGATTGAAG+AGG 0.595938 1_3:+71763899 Msa0138630:CDS
CTGTTCAATTCCAATTGGAA+TGG 0.597922 1_3:-71765982 None:intergenic
GCTCAAGTGGCACTCGAGCG+CGG 0.598647 1_3:+71764365 Msa0138630:CDS
ATGGAATTTGAATCAAGTCA+TGG 0.598850 1_3:-71767262 None:intergenic
TACAAACCATTGGAATGCCA+AGG 0.599774 1_3:-71764479 None:intergenic
GACATGAAATCCATCTATGG+AGG 0.599957 1_3:+71766173 Msa0138630:CDS
TGTAGTACCTGTCCATGCAC+CGG 0.602517 1_3:+71766502 Msa0138630:CDS
TCATTGGAGAAAGAGGAAGA+AGG 0.607017 1_3:+71762653 Msa0138630:CDS
ATCTTCACCCATAACCCAGT+TGG 0.609231 1_3:-71762290 None:intergenic
TGCAGTACCGGCACACGGAG+AGG 0.611552 1_3:+71762939 Msa0138630:CDS
TATCTCAGAATCTTCATCGA+CGG 0.613988 1_3:-71762771 None:intergenic
ACCGTATCTTACGGCCAGGA+GGG 0.614741 1_3:+71767042 Msa0138630:CDS
GCGCCCTCATAAGAAAGAAG+TGG 0.618413 1_3:+71762568 Msa0138630:CDS
TGTGTCGATTGTTGTTGAGA+TGG 0.618841 1_3:+71767019 Msa0138630:CDS
AGAGAGATAACAATTCAATG+TGG 0.621173 1_3:+71767482 Msa0138630:three_prime_UTR
ATTGATATCGAAGTAGGTGG+TGG 0.622929 1_3:+71762911 Msa0138630:CDS
TTGATTCACGTGTAAGTCGA+GGG 0.625600 1_3:-71767295 None:intergenic
ATTGATTCACGTGTAAGTCG+AGG 0.625907 1_3:-71767296 None:intergenic
AATTGGAATTGAACAGCATG+GGG 0.627104 1_3:+71765989 Msa0138630:CDS
GGCCTGAGGAATGGCCGAAG+AGG 0.629075 1_3:+71766018 Msa0138630:CDS
AGAATATATCAAAAGCCTGA+AGG 0.629533 1_3:+71765764 Msa0138630:CDS
ACACGGAGAGGAGTTGTCCA+AGG 0.632925 1_3:+71762951 Msa0138630:CDS
AATCGGATTCTAAGACCTGG+TGG 0.635756 1_3:+71764632 Msa0138630:CDS
GATGGTACCAGACATTGAGT+GGG 0.637533 1_3:+71764223 Msa0138630:intron
GTTATGAGTCTCCGGTGCCG+TGG 0.638672 1_3:+71763011 Msa0138630:CDS
GACCGTATCTTACGGCCAGG+AGG 0.642174 1_3:+71767041 Msa0138630:CDS
TATCGAAGTAGGTGGTGGAA+AGG 0.642635 1_3:+71762916 Msa0138630:CDS
GAATTTGAATCAAGTCATGG+TGG 0.644298 1_3:-71767259 None:intergenic
GAAACGTGTGCATAAGAAGG+AGG 0.648185 1_3:+71762601 Msa0138630:CDS
AGAGGAACCATACACATGAA+GGG 0.652407 1_3:-71762977 None:intergenic
ACATGAAATCCATCTATGGA+GGG 0.652438 1_3:+71766174 Msa0138630:CDS
ATGAATCGGATTCTAAGACC+TGG 0.653113 1_3:+71764629 Msa0138630:CDS
AATTTGAATCAAGTCATGGT+GGG 0.654326 1_3:-71767258 None:intergenic
AAAGGTGCAGTACCGGCACA+CGG 0.659564 1_3:+71762934 Msa0138630:CDS
AGCAGCATACCAGACTGCGT+CGG 0.659641 1_3:-71765849 None:intergenic
GTGCACAGAAAACTCTATGG+AGG 0.659798 1_3:+71767177 Msa0138630:CDS
TGCATTGATATCGAAGTAGG+TGG 0.661775 1_3:+71762908 Msa0138630:CDS
ATCTCAACAACAATCGACAC+AGG 0.661847 1_3:-71767017 None:intergenic
GCACATAAAAGTGATGATGT+TGG 0.662214 1_3:+71765728 Msa0138630:CDS
GGAGACTCATAACCATCAAG+AGG 0.664207 1_3:-71763001 None:intergenic
TGGCTTGAAAGATGACCTAG+TGG 0.665585 1_3:+71764337 Msa0138630:CDS
TTGAACAGCATGGGGCAGAG+TGG 0.669285 1_3:+71765997 Msa0138630:CDS
GACATGATGAAGTATCCACC+AGG 0.675601 1_3:-71764647 None:intergenic
CCTACTTCGATATCAATGCA+AGG 0.678756 1_3:-71762905 None:intergenic
GTCAAGCTAAAAGACCAACT+GGG 0.685042 1_3:+71762276 Msa0138630:CDS
GCATGGGGCAGAGTGGCCTG+AGG 0.694517 1_3:+71766004 Msa0138630:CDS
ACAAATAGAGGCTGTCAGTG+CGG 0.698581 1_3:-71765693 None:intergenic
CAATAAGGAGAAATTGATCG+CGG 0.710195 1_3:+71766067 Msa0138630:CDS
ATGGTACCAGACATTGAGTG+GGG 0.716463 1_3:+71764224 Msa0138630:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAACAAATTTATTATTTCA+AGG - chr1_3:71765253-71765272 None:intergenic 10.0%
!!! ATTTTTCATCATTTTTAAAT+AGG + chr1_3:71765931-71765950 Msa0138630:intron 10.0%
!!! TGAAAAGTATGTTATATTTA+AGG + chr1_3:71763057-71763076 Msa0138630:intron 15.0%
!!! GTAAATTTTCATTTATTAGT+CGG + chr1_3:71763634-71763653 Msa0138630:intron 15.0%
!! AACAGTTAATTAAATACATA+AGG + chr1_3:71765001-71765020 Msa0138630:intron 15.0%
!!! TTGATTTGTGATTATTTAAA+AGG - chr1_3:71765163-71765182 None:intergenic 15.0%
!! AATAATCACAAATCAAATAA+TGG + chr1_3:71765167-71765186 Msa0138630:intron 15.0%
!! TAAGGTTGTTTATTAATAAT+AGG + chr1_3:71765906-71765925 Msa0138630:intron 15.0%
!!! AGTTATTTCTATAGTTAAAA+TGG + chr1_3:71766739-71766758 Msa0138630:intron 15.0%
!!! GTTATTTCTATAGTTAAAAT+GGG + chr1_3:71766740-71766759 Msa0138630:intron 15.0%
!! ATTTATTGTTAAAAGCAATT+TGG - chr1_3:71766981-71767000 None:intergenic 15.0%
!! AAAAAATGGTATATATTAGA+GGG - chr1_3:71767210-71767229 None:intergenic 15.0%
!! AAAAAAATGGTATATATTAG+AGG - chr1_3:71767211-71767230 None:intergenic 15.0%
!!! TCTAATATATACCATTTTTT+TGG + chr1_3:71767210-71767229 Msa0138630:three_prime_UTR 15.0%
!! TTAACATTTGATTCAAACAA+AGG - chr1_3:71762839-71762858 None:intergenic 20.0%
!! AATCAAATGTTAACTATAGA+TGG + chr1_3:71762846-71762865 Msa0138630:CDS 20.0%
!! CATATATTAAAAAACATCGT+TGG + chr1_3:71763808-71763827 Msa0138630:CDS 20.0%
!! ATACAATGATTATGTTTAAG+AGG - chr1_3:71763961-71763980 None:intergenic 20.0%
!! GATAGAACATTAGTTAATAA+TGG + chr1_3:71763988-71764007 Msa0138630:intron 20.0%
!! AAAATACCAAAATTATAGAC+TGG - chr1_3:71764507-71764526 None:intergenic 20.0%
!!! ATCCTTTCATTTTTTTTTCA+GGG + chr1_3:71764588-71764607 Msa0138630:intron 20.0%
!!! ATAAAACAAGAGTATTAACT+GGG + chr1_3:71764939-71764958 Msa0138630:intron 20.0%
!! CTCACTTATAAAATCAATTT+CGG + chr1_3:71765336-71765355 Msa0138630:intron 20.0%
!!! TTTTCATTTTCTTTGCAAAT+TGG - chr1_3:71765827-71765846 None:intergenic 20.0%
!!! TTTTTCCTTATATTTAAGTC+CGG - chr1_3:71766272-71766291 None:intergenic 20.0%
!! TTATTTCCATAAGTTACAAT+AGG + chr1_3:71766797-71766816 Msa0138630:intron 20.0%
!! TAATCAACTTAATGTGTAAA+AGG + chr1_3:71767328-71767347 Msa0138630:three_prime_UTR 20.0%
!!! TTTTTGCTGTAAAAATTACT+TGG + chr1_3:71767418-71767437 Msa0138630:three_prime_UTR 20.0%
!!! GTCTCTGTTTTATTTTTGTT+TGG + chr1_3:71762333-71762352 Msa0138630:CDS 25.0%
!!! TTCTTCTGTTAGTTTTCAAA+GGG + chr1_3:71762376-71762395 Msa0138630:CDS 25.0%
!! ATGAGAAAAAGATTGATGAT+GGG + chr1_3:71762522-71762541 Msa0138630:CDS 25.0%
! AATAAAGAGAATGTGAATCA+AGG + chr1_3:71762629-71762648 Msa0138630:CDS 25.0%
! ATAAAGAGAATGTGAATCAA+GGG + chr1_3:71762630-71762649 Msa0138630:CDS 25.0%
! AGAGTTAAAGAAAACAAAGA+AGG + chr1_3:71762799-71762818 Msa0138630:CDS 25.0%
! GAGTTAAAGAAAACAAAGAA+GGG + chr1_3:71762800-71762819 Msa0138630:CDS 25.0%
!! GTTATATTTAAGGTCTAGTT+TGG + chr1_3:71763067-71763086 Msa0138630:intron 25.0%
! ATCCATATAAGCTTATAGTA+TGG + chr1_3:71763145-71763164 Msa0138630:intron 25.0%
! CTTATAGTATGGAGAATTTA+GGG + chr1_3:71763156-71763175 Msa0138630:intron 25.0%
! AAGCTTATTTGAGAGTTTAT+GGG - chr1_3:71763295-71763314 None:intergenic 25.0%
! TAAGCTTATTTGAGAGTTTA+TGG - chr1_3:71763296-71763315 None:intergenic 25.0%
! CGTAAGCAATTATATGATAA+TGG - chr1_3:71763374-71763393 None:intergenic 25.0%
! TTTCATTTATTAGTCGGATA+AGG + chr1_3:71763640-71763659 Msa0138630:intron 25.0%
!! TTAATATATGCAGCTAGTTT+CGG - chr1_3:71763798-71763817 None:intergenic 25.0%
! TATTAAAAAACATCGTTGGT+TGG + chr1_3:71763812-71763831 Msa0138630:CDS 25.0%
!! AAAGAAATGAGACTATGTTT+TGG - chr1_3:71764027-71764046 None:intergenic 25.0%
! AAAACATAGTCTCATTTCTT+TGG + chr1_3:71764026-71764045 Msa0138630:intron 25.0%
!! TGTATTCCAGTCTATAATTT+TGG + chr1_3:71764498-71764517 Msa0138630:intron 25.0%
! CTGAAAAAAAAATGAAAGGA+TGG - chr1_3:71764589-71764608 None:intergenic 25.0%
!!! CATCCTTTCATTTTTTTTTC+AGG + chr1_3:71764587-71764606 Msa0138630:intron 25.0%
!!! TCCTTTCATTTTTTTTTCAG+GGG + chr1_3:71764589-71764608 Msa0138630:intron 25.0%
!!! GATAAAACAAGAGTATTAAC+TGG + chr1_3:71764938-71764957 Msa0138630:intron 25.0%
!! GTAATTCAGTTTTCAATTAC+AGG - chr1_3:71765052-71765071 None:intergenic 25.0%
! GTCAATGATAGAATTATGTA+AGG - chr1_3:71765127-71765146 None:intergenic 25.0%
!! TGTATTGCATTTTGTATTCT+AGG - chr1_3:71765199-71765218 None:intergenic 25.0%
! TCTGAAAATGAGTTTATAAG+CGG - chr1_3:71765524-71765543 None:intergenic 25.0%
!! AGCAAAAAAGTACATGTATT+TGG - chr1_3:71766323-71766342 None:intergenic 25.0%
! TCTATCTAAACATAACGTTT+GGG + chr1_3:71766472-71766491 Msa0138630:CDS 25.0%
! AAAGATAAGTACAACAATAC+TGG - chr1_3:71766675-71766694 None:intergenic 25.0%
! AAACTTCCTATTGTAACTTA+TGG - chr1_3:71766806-71766825 None:intergenic 25.0%
!! GCTTTTAACAATAAATTTGC+AGG + chr1_3:71766985-71767004 Msa0138630:intron 25.0%
!! AAATATTGAGAAGTATGCAA+TGG + chr1_3:71767111-71767130 Msa0138630:CDS 25.0%
!! AATATTGAGAAGTATGCAAT+GGG + chr1_3:71767112-71767131 Msa0138630:CDS 25.0%
! TGTTTGAAGAAATAGAACAT+TGG + chr1_3:71767451-71767470 Msa0138630:three_prime_UTR 25.0%
! ATGACAGCTGTAACAATTTT+GGG + chr1_3:71762311-71762330 Msa0138630:CDS 30.0%
!!! CTTCTTCTGTTAGTTTTCAA+AGG + chr1_3:71762375-71762394 Msa0138630:CDS 30.0%
!!! TGGTGTTGGTTTTTTAACAT+TGG - chr1_3:71762450-71762469 None:intergenic 30.0%
GATGAGAAAAAGATTGATGA+TGG + chr1_3:71762521-71762540 Msa0138630:CDS 30.0%
!!! TGGATTAGCTTTTAGATTGT+TGG + chr1_3:71763087-71763106 Msa0138630:intron 30.0%
!!! ATTAGCTTTTAGATTGTTGG+AGG + chr1_3:71763090-71763109 Msa0138630:intron 30.0%
CTCCATACTATAAGCTTATA+TGG - chr1_3:71763150-71763169 None:intergenic 30.0%
GCTTATAGTATGGAGAATTT+AGG + chr1_3:71763155-71763174 Msa0138630:intron 30.0%
! ATTAAGTTGTTTAGCCTACT+AGG + chr1_3:71763407-71763426 Msa0138630:intron 30.0%
! TTAAGTTGTTTAGCCTACTA+GGG + chr1_3:71763408-71763427 Msa0138630:intron 30.0%
AATCCTAGTAGAAGCTTATA+GGG - chr1_3:71763500-71763519 None:intergenic 30.0%
AAATCCTAGTAGAAGCTTAT+AGG - chr1_3:71763501-71763520 None:intergenic 30.0%
AAACATGTAGATATTGCAAG+AGG + chr1_3:71763591-71763610 Msa0138630:intron 30.0%
TGTTATCTCACAGTAACATT+TGG + chr1_3:71763737-71763756 Msa0138630:intron 30.0%
! TAATATATGCAGCTAGTTTC+GGG - chr1_3:71763797-71763816 None:intergenic 30.0%
!!! AAAATTCTGACTGGTTTTGA+GGG - chr1_3:71763863-71763882 None:intergenic 30.0%
!!! AAAAATTCTGACTGGTTTTG+AGG - chr1_3:71763864-71763883 None:intergenic 30.0%
! TCAAAACCAGTCAGAATTTT+TGG + chr1_3:71763863-71763882 Msa0138630:CDS 30.0%
! CAAAACCAGTCAGAATTTTT+GGG + chr1_3:71763864-71763883 Msa0138630:CDS 30.0%
TTAGAATGATGCTTGTTTGT+TGG + chr1_3:71763933-71763952 Msa0138630:intron 30.0%
TTTCAAGATGTTTGCAAAGA+TGG - chr1_3:71764185-71764204 None:intergenic 30.0%
CTTGTCCTGAAAATTATAGA+TGG + chr1_3:71764205-71764224 Msa0138630:intron 30.0%
! TGGTACCATCTATAATTTTC+AGG - chr1_3:71764213-71764232 None:intergenic 30.0%
TAAAAATATTCGTGTTGTCC+TGG + chr1_3:71764247-71764266 Msa0138630:CDS 30.0%
!! TCAAAAACTTGACTTGGAAA+AGG - chr1_3:71764431-71764450 None:intergenic 30.0%
ATAGCATCAAAAACTTGACT+TGG - chr1_3:71764437-71764456 None:intergenic 30.0%
!!! CCTTTCATTTTTTTTTCAGG+GGG + chr1_3:71764590-71764609 Msa0138630:intron 30.0%
TGCACTCATTGATGAAATAA+AGG + chr1_3:71764728-71764747 Msa0138630:intron 30.0%
TGTTTCTTGTGATTCATTCT+CGG + chr1_3:71764756-71764775 Msa0138630:intron 30.0%
CAAAAACACGATATTTAACC+AGG + chr1_3:71764860-71764879 Msa0138630:intron 30.0%
ATTTAACCAGGTGTATGTAA+AGG + chr1_3:71764872-71764891 Msa0138630:intron 30.0%
TTTAACCAGGTGTATGTAAA+GGG + chr1_3:71764873-71764892 Msa0138630:intron 30.0%
AGGTTCATTTGTTTGATTCT+AGG - chr1_3:71765233-71765252 None:intergenic 30.0%
GTCTCACATTAGATGAAATA+TGG - chr1_3:71765363-71765382 None:intergenic 30.0%
CTGAAAATGAGTTTATAAGC+GGG - chr1_3:71765523-71765542 None:intergenic 30.0%
TTGTAGTGTGAGTTTATAAG+TGG + chr1_3:71765614-71765633 Msa0138630:intron 30.0%
AGAATATATCAAAAGCCTGA+AGG + chr1_3:71765764-71765783 Msa0138630:CDS 30.0%
ATGACATATACGAATTGAGA+AGG + chr1_3:71765789-71765808 Msa0138630:CDS 30.0%
! CATTTTCTTTGCAAATTGGT+GGG - chr1_3:71765823-71765842 None:intergenic 30.0%
! TCATTTTCTTTGCAAATTGG+TGG - chr1_3:71765824-71765843 None:intergenic 30.0%
!! ACTTGTTTCTAATCAGCTTA+AGG + chr1_3:71765888-71765907 Msa0138630:intron 30.0%
!! GAGATATGACTTGTTAACTA+TGG - chr1_3:71766111-71766130 None:intergenic 30.0%
GTTAACAAGTCATATCTCAA+TGG + chr1_3:71766113-71766132 Msa0138630:CDS 30.0%
AAGTCATATCTCAATGGAAT+GGG + chr1_3:71766119-71766138 Msa0138630:CDS 30.0%
GACAAATATCAGGAATGTAA+TGG + chr1_3:71766151-71766170 Msa0138630:CDS 30.0%
!! TTAAAATCAAGTGGTTTTGC+TGG - chr1_3:71766204-71766223 None:intergenic 30.0%
! ATTTTCCTTTGATACCATTC+CGG + chr1_3:71766250-71766269 Msa0138630:intron 30.0%
! ACATGTATTTGGTTCACATT+TGG - chr1_3:71766312-71766331 None:intergenic 30.0%
AGATGTTGGAAATCATTCAA+TGG - chr1_3:71766392-71766411 None:intergenic 30.0%
! TCATGTTTCTAACAAGATGT+TGG - chr1_3:71766406-71766425 None:intergenic 30.0%
! CAGCTAATCTGTATTTTCAT+AGG - chr1_3:71766448-71766467 None:intergenic 30.0%
CTCTATCTAAACATAACGTT+TGG + chr1_3:71766471-71766490 Msa0138630:CDS 30.0%
AATCCCCGTTCAAAAATTAT+GGG - chr1_3:71766536-71766555 None:intergenic 30.0%
AAATCCCCGTTCAAAAATTA+TGG - chr1_3:71766537-71766556 None:intergenic 30.0%
! ATTTTTGAACGGGGATTTTT+TGG + chr1_3:71766539-71766558 Msa0138630:CDS 30.0%
AAACGCTAGTATAATGGTTA+TGG - chr1_3:71766712-71766731 None:intergenic 30.0%
AGTTGAAATCCTAAATGCAT+TGG + chr1_3:71767085-71767104 Msa0138630:CDS 30.0%
ATATTTCCTCCAATGCATTT+AGG - chr1_3:71767097-71767116 None:intergenic 30.0%
GTGATGATACACCAAAAAAA+TGG - chr1_3:71767224-71767243 None:intergenic 30.0%
AATTTGAATCAAGTCATGGT+GGG - chr1_3:71767261-71767280 None:intergenic 30.0%
ATGGAATTTGAATCAAGTCA+TGG - chr1_3:71767265-71767284 None:intergenic 30.0%
AGAGAGATAACAATTCAATG+TGG + chr1_3:71767482-71767501 Msa0138630:three_prime_UTR 30.0%
GAGAGATAACAATTCAATGT+GGG + chr1_3:71767483-71767502 Msa0138630:three_prime_UTR 30.0%
TAAAAGACCAACTGGGTTAT+GGG + chr1_3:71762283-71762302 Msa0138630:CDS 35.0%
! GATGACAGCTGTAACAATTT+TGG + chr1_3:71762310-71762329 Msa0138630:CDS 35.0%
GAAGAAGAAGAAGAAGAAAC+AGG - chr1_3:71762425-71762444 None:intergenic 35.0%
!! CGTTTTTCTGATTTTGGTGT+TGG - chr1_3:71762464-71762483 None:intergenic 35.0%
GAGTTGGAAGATAAAGAAGA+AGG + chr1_3:71762683-71762702 Msa0138630:CDS 35.0%
GGAAGATAAAGAAGAAGGAT+TGG + chr1_3:71762688-71762707 Msa0138630:CDS 35.0%
! TCATGAGAGTGAAGTTGATT+TGG + chr1_3:71762712-71762731 Msa0138630:CDS 35.0%
GATTTGGATTCTGATGTTGT+TGG + chr1_3:71762728-71762747 Msa0138630:CDS 35.0%
TATCTCAGAATCTTCATCGA+CGG - chr1_3:71762774-71762793 None:intergenic 35.0%
!! CGATGAAGATTCTGAGATAT+TGG + chr1_3:71762775-71762794 Msa0138630:CDS 35.0%
ACAAAGAAGGGAAAAGTGAA+AGG + chr1_3:71762812-71762831 Msa0138630:CDS 35.0%
! TATACCTTCAATTTGCTCTC+AGG - chr1_3:71763037-71763056 None:intergenic 35.0%
AATCCCTATAAGCTTCTACT+AGG + chr1_3:71763494-71763513 Msa0138630:intron 35.0%
TTTATTAGTCGGATAAGGCT+CGG + chr1_3:71763645-71763664 Msa0138630:intron 35.0%
! TAAAAAACATCGTTGGTTGG+TGG + chr1_3:71763815-71763834 Msa0138630:CDS 35.0%
GAGATGAAAATGTATCTCTG+TGG + chr1_3:71764056-71764075 Msa0138630:intron 35.0%
!!! GGTGTTTTAACATTGTCACT+TGG + chr1_3:71764317-71764336 Msa0138630:CDS 35.0%
TAGACTGGAATACAAACCAT+TGG - chr1_3:71764492-71764511 None:intergenic 35.0%
CCCCCTGAAAAAAAAATGAA+AGG - chr1_3:71764593-71764612 None:intergenic 35.0%
AACTTCTACTGGAGATGAAT+CGG + chr1_3:71764615-71764634 Msa0138630:CDS 35.0%
! GATAGCATTGAAGAAGAAGA+AGG + chr1_3:71764680-71764699 Msa0138630:CDS 35.0%
TAACCATGCTTAGAATCAGA+GGG - chr1_3:71764788-71764807 None:intergenic 35.0%
ATAACCATGCTTAGAATCAG+AGG - chr1_3:71764789-71764808 None:intergenic 35.0%
GATTCTAAGCATGGTTATCA+TGG + chr1_3:71764791-71764810 Msa0138630:intron 35.0%
!! TCATACAAGTCGGTTTTGTA+GGG - chr1_3:71765305-71765324 None:intergenic 35.0%
!! ATCATACAAGTCGGTTTTGT+AGG - chr1_3:71765306-71765325 None:intergenic 35.0%
AAAACCTAAGCTGGTACATT+AGG - chr1_3:71765449-71765468 None:intergenic 35.0%
! TACCAGCTTAGGTTTTTATG+TGG + chr1_3:71765453-71765472 Msa0138630:intron 35.0%
! ACCAGCTTAGGTTTTTATGT+GGG + chr1_3:71765454-71765473 Msa0138630:intron 35.0%
GCTAATCCTGCTTACAAAAT+CGG + chr1_3:71765476-71765495 Msa0138630:intron 35.0%
AAAATGAGTTTATAAGCGGG+AGG - chr1_3:71765520-71765539 None:intergenic 35.0%
CAGAACATTCCAACAAATAG+AGG - chr1_3:71765708-71765727 None:intergenic 35.0%
! CTCTATTTGTTGGAATGTTC+TGG + chr1_3:71765706-71765725 Msa0138630:CDS 35.0%
! GCACATAAAAGTGATGATGT+TGG + chr1_3:71765728-71765747 Msa0138630:CDS 35.0%
! TCGTATATGTCATTTCCTTC+AGG - chr1_3:71765782-71765801 None:intergenic 35.0%
CTGTTCAATTCCAATTGGAA+TGG - chr1_3:71765985-71766004 None:intergenic 35.0%
CAATTGGAATTGAACAGCAT+GGG + chr1_3:71765988-71766007 Msa0138630:CDS 35.0%
AATTGGAATTGAACAGCATG+GGG + chr1_3:71765989-71766008 Msa0138630:CDS 35.0%
CAATAAGGAGAAATTGATCG+CGG + chr1_3:71766067-71766086 Msa0138630:CDS 35.0%
CAAGTCATATCTCAATGGAA+TGG + chr1_3:71766118-71766137 Msa0138630:CDS 35.0%
GCATTAACTGGACAAATATC+AGG + chr1_3:71766141-71766160 Msa0138630:CDS 35.0%
ATGGACATGAAATCCATCTA+TGG + chr1_3:71766170-71766189 Msa0138630:CDS 35.0%
ACATGAAATCCATCTATGGA+GGG + chr1_3:71766174-71766193 Msa0138630:CDS 35.0%
GCAACGAACTTAAAATCAAG+TGG - chr1_3:71766213-71766232 None:intergenic 35.0%
CCTTATATTTAAGTCCGGAA+TGG - chr1_3:71766267-71766286 None:intergenic 35.0%
CCATTCCGGACTTAAATATA+AGG + chr1_3:71766264-71766283 Msa0138630:intron 35.0%
GGAAAAACCATACATGTATC+TGG + chr1_3:71766285-71766304 Msa0138630:intron 35.0%
ATTTGGACCAGATACATGTA+TGG - chr1_3:71766295-71766314 None:intergenic 35.0%
! AAAATTATGGGAAGCGTATC+CGG - chr1_3:71766524-71766543 None:intergenic 35.0%
! CGCTTCCCATAATTTTTGAA+CGG + chr1_3:71766528-71766547 Msa0138630:CDS 35.0%
! GCTTCCCATAATTTTTGAAC+GGG + chr1_3:71766529-71766548 Msa0138630:CDS 35.0%
! CTTCCCATAATTTTTGAACG+GGG + chr1_3:71766530-71766549 Msa0138630:CDS 35.0%
ATACGCAAACGCTAGTATAA+TGG - chr1_3:71766718-71766737 None:intergenic 35.0%
AGCTGAAAAAACTTATGCAC+AGG + chr1_3:71766835-71766854 Msa0138630:intron 35.0%
GTTAAAAGCAATTTGGTCAC+AGG - chr1_3:71766974-71766993 None:intergenic 35.0%
TGAAATCCTAAATGCATTGG+AGG + chr1_3:71767088-71767107 Msa0138630:CDS 35.0%
AATCAGAATGACTTTCTACC+AGG + chr1_3:71767136-71767155 Msa0138630:CDS 35.0%
ACTTTCTACCAGGAAAAAGA+GGG + chr1_3:71767146-71767165 Msa0138630:CDS 35.0%
! ATAAGATACCCTCTTTTTCC+TGG - chr1_3:71767157-71767176 None:intergenic 35.0%
TATGTGCACAGAAAACTCTA+TGG + chr1_3:71767174-71767193 Msa0138630:CDS 35.0%
GGTATATATTAGAGGGTTCA+AGG - chr1_3:71767203-71767222 None:intergenic 35.0%
GAATTTGAATCAAGTCATGG+TGG - chr1_3:71767262-71767281 None:intergenic 35.0%
GTCAAGCTAAAAGACCAACT+GGG + chr1_3:71762276-71762295 Msa0138630:CDS 40.0%
CTAAAAGACCAACTGGGTTA+TGG + chr1_3:71762282-71762301 Msa0138630:CDS 40.0%
ACCAAAATCAGAAAAACGCG+TGG + chr1_3:71762466-71762485 Msa0138630:CDS 40.0%
! TCCACGCGTTTTTCTGATTT+TGG - chr1_3:71762470-71762489 None:intergenic 40.0%
!! GTGCCACTTCTTTCTTATGA+GGG - chr1_3:71762574-71762593 None:intergenic 40.0%
GAAGAAACGTGTGCATAAGA+AGG + chr1_3:71762598-71762617 Msa0138630:CDS 40.0%
GAATGTGAATCAAGGGTCAT+TGG + chr1_3:71762637-71762656 Msa0138630:CDS 40.0%
TCATTGGAGAAAGAGGAAGA+AGG + chr1_3:71762653-71762672 Msa0138630:CDS 40.0%
GGAAGAAGGTGAAAAAGAGT+TGG + chr1_3:71762667-71762686 Msa0138630:CDS 40.0%
TTGGATTCTGATGTTGTTGG+TGG + chr1_3:71762731-71762750 Msa0138630:CDS 40.0%
CCTACTTCGATATCAATGCA+AGG - chr1_3:71762908-71762927 None:intergenic 40.0%
! CCTTGCATTGATATCGAAGT+AGG + chr1_3:71762905-71762924 Msa0138630:CDS 40.0%
! TGCATTGATATCGAAGTAGG+TGG + chr1_3:71762908-71762927 Msa0138630:CDS 40.0%
ATTGATATCGAAGTAGGTGG+TGG + chr1_3:71762911-71762930 Msa0138630:CDS 40.0%
AGAGGAACCATACACATGAA+GGG - chr1_3:71762980-71762999 None:intergenic 40.0%
AAGAGGAACCATACACATGA+AGG - chr1_3:71762981-71763000 None:intergenic 40.0%
TCATAACCATCAAGAGGAAG+AGG - chr1_3:71762998-71763017 None:intergenic 40.0%
! TCTTGATGGTTATGAGTCTC+CGG + chr1_3:71763003-71763022 Msa0138630:CDS 40.0%
!! TCTAGTCTAGCCTTAAGTGT+TGG + chr1_3:71763696-71763715 Msa0138630:intron 40.0%
!! TCTAGCCTTAAGTGTTGGAT+TGG + chr1_3:71763701-71763720 Msa0138630:intron 40.0%
CCAAACCAATCCAACACTTA+AGG - chr1_3:71763709-71763728 None:intergenic 40.0%
!! CCTTAAGTGTTGGATTGGTT+TGG + chr1_3:71763706-71763725 Msa0138630:intron 40.0%
!! AACCAGTCAGAATTTTTGGG+AGG + chr1_3:71763867-71763886 Msa0138630:CDS 40.0%
!! ACCAGTCAGAATTTTTGGGA+GGG + chr1_3:71763868-71763887 Msa0138630:CDS 40.0%
CTATCTTGAGTCGATTGAAG+AGG + chr1_3:71763899-71763918 Msa0138630:CDS 40.0%
CAAGATGTTTGCAAAGATGG+TGG - chr1_3:71764182-71764201 None:intergenic 40.0%
! TTTTTACCCCACTCAATGTC+TGG - chr1_3:71764233-71764252 None:intergenic 40.0%
AATCTGTACATCCAATGTCC+AGG - chr1_3:71764268-71764287 None:intergenic 40.0%
CAAAAGGGCTAACCAATGTT+GGG - chr1_3:71764394-71764413 None:intergenic 40.0%
GAAGTCTCCTTCTAGCAAAA+GGG - chr1_3:71764409-71764428 None:intergenic 40.0%
TACAAACCATTGGAATGCCA+AGG - chr1_3:71764482-71764501 None:intergenic 40.0%
!! ATGAATCGGATTCTAAGACC+TGG + chr1_3:71764629-71764648 Msa0138630:CDS 40.0%
AACCATGCTTAGAATCAGAG+GGG - chr1_3:71764787-71764806 None:intergenic 40.0%
! TGACTGTTTGACTTCACACT+TGG - chr1_3:71764973-71764992 None:intergenic 40.0%
!! CAAAACCGACTTGTATGATG+AGG + chr1_3:71765307-71765326 Msa0138630:intron 40.0%
GACATCCTCATCATACAAGT+CGG - chr1_3:71765315-71765334 None:intergenic 40.0%
AGTCATGCGTAACCATTCAT+GGG - chr1_3:71765404-71765423 None:intergenic 40.0%
AAGTCATGCGTAACCATTCA+TGG - chr1_3:71765405-71765424 None:intergenic 40.0%
AATGGTTACGCATGACTTGA+GGG + chr1_3:71765407-71765426 Msa0138630:intron 40.0%
!! TACAAGCCGATTTTGTAAGC+AGG - chr1_3:71765485-71765504 None:intergenic 40.0%
!! TGCTTACAAAATCGGCTTGT+AGG + chr1_3:71765484-71765503 Msa0138630:intron 40.0%
!! GCTTACAAAATCGGCTTGTA+GGG + chr1_3:71765485-71765504 Msa0138630:intron 40.0%
TGACCTGAGTAACCTTGAAA+CGG + chr1_3:71765577-71765596 Msa0138630:intron 40.0%
GTTGTTAGTCATCCGTTTCA+AGG - chr1_3:71765592-71765611 None:intergenic 40.0%
TGCTGCTGAAACATTAGTTG+AGG + chr1_3:71765865-71765884 Msa0138630:intron 40.0%
GTGTGCAAACAAGTCTTGAT+TGG - chr1_3:71765963-71765982 None:intergenic 40.0%
TGTTTGCACACCATTCCAAT+TGG + chr1_3:71765972-71765991 Msa0138630:CDS 40.0%
CCATGCTGTTCAATTCCAAT+TGG - chr1_3:71765990-71766009 None:intergenic 40.0%
CCAATTGGAATTGAACAGCA+TGG + chr1_3:71765987-71766006 Msa0138630:CDS 40.0%
TCCTGACTGGATGAACAATA+AGG + chr1_3:71766052-71766071 Msa0138630:CDS 40.0%
TCCTTATTGTTCATCCAGTC+AGG - chr1_3:71766056-71766075 None:intergenic 40.0%
TGTTAACTATGGCGTTCCAA+TGG - chr1_3:71766100-71766119 None:intergenic 40.0%
TCAATGGAATGGGCATTAAC+TGG + chr1_3:71766129-71766148 Msa0138630:CDS 40.0%
GACATGAAATCCATCTATGG+AGG + chr1_3:71766173-71766192 Msa0138630:CDS 40.0%
TAAGTCCGGAATGGTATCAA+AGG - chr1_3:71766258-71766277 None:intergenic 40.0%
!! TTTTTGGCGTCTATCACGAT+TGG + chr1_3:71766555-71766574 Msa0138630:CDS 40.0%
TGCAGAAGGTCATAAGTTCT+TGG - chr1_3:71766602-71766621 None:intergenic 40.0%
ACAAATGATCAGCATGCAGA+AGG - chr1_3:71766616-71766635 None:intergenic 40.0%
ATCTCAACAACAATCGACAC+AGG - chr1_3:71767020-71767039 None:intergenic 40.0%
!! TGTGTCGATTGTTGTTGAGA+TGG + chr1_3:71767019-71767038 Msa0138630:CDS 40.0%
TTGAGATGGACCGTATCTTA+CGG + chr1_3:71767033-71767052 Msa0138630:CDS 40.0%
GACTTTCTACCAGGAAAAAG+AGG + chr1_3:71767145-71767164 Msa0138630:CDS 40.0%
AGTCGAGGGAAAGAATATCA+TGG - chr1_3:71767284-71767303 None:intergenic 40.0%
TTGATTCACGTGTAAGTCGA+GGG - chr1_3:71767298-71767317 None:intergenic 40.0%
! ATTGATTCACGTGTAAGTCG+AGG - chr1_3:71767299-71767318 None:intergenic 40.0%
!!! GTTGGTCTTTTAGCTTGACG+AGG - chr1_3:71762275-71762294 None:intergenic 45.0%
CGTCAAGCTAAAAGACCAAC+TGG + chr1_3:71762275-71762294 Msa0138630:CDS 45.0%
ATCTTCACCCATAACCCAGT+TGG - chr1_3:71762293-71762312 None:intergenic 45.0%
ATCAGAAAAACGCGTGGAAG+TGG + chr1_3:71762472-71762491 Msa0138630:CDS 45.0%
!! CGTGCCACTTCTTTCTTATG+AGG - chr1_3:71762575-71762594 None:intergenic 45.0%
GAAACGTGTGCATAAGAAGG+AGG + chr1_3:71762601-71762620 Msa0138630:CDS 45.0%
TCAAGGGTCATTGGAGAAAG+AGG + chr1_3:71762646-71762665 Msa0138630:CDS 45.0%
!! TATCGAAGTAGGTGGTGGAA+AGG + chr1_3:71762916-71762935 Msa0138630:CDS 45.0%
!! ATACACATGAAGGGCATCCT+TGG - chr1_3:71762971-71762990 None:intergenic 45.0%
AAGGATGCCCTTCATGTGTA+TGG + chr1_3:71762970-71762989 Msa0138630:CDS 45.0%
ATGGTTCCTCTTCCTCTTGA+TGG + chr1_3:71762989-71763008 Msa0138630:CDS 45.0%
GGAGACTCATAACCATCAAG+AGG - chr1_3:71763004-71763023 None:intergenic 45.0%
! TTCAATTTGCTCTCAGGCCA+CGG - chr1_3:71763031-71763050 None:intergenic 45.0%
AGACTGTTTGCGAGAGCTAA+TGG + chr1_3:71763229-71763248 Msa0138630:intron 45.0%
TTGTTTAGCCTACTAGGGTC+TGG + chr1_3:71763413-71763432 Msa0138630:intron 45.0%
AATCCAAACCAGACCCTAGT+AGG - chr1_3:71763424-71763443 None:intergenic 45.0%
TCCCTCCCAAAAATTCTGAC+TGG - chr1_3:71763872-71763891 None:intergenic 45.0%
TCTGTGGCACTGTGATTTCT+AGG + chr1_3:71764072-71764091 Msa0138630:intron 45.0%
AGATGGTACCAGACATTGAG+TGG + chr1_3:71764222-71764241 Msa0138630:intron 45.0%
GATGGTACCAGACATTGAGT+GGG + chr1_3:71764223-71764242 Msa0138630:intron 45.0%
ATGGTACCAGACATTGAGTG+GGG + chr1_3:71764224-71764243 Msa0138630:CDS 45.0%
ATTCGTGTTGTCCTGGACAT+TGG + chr1_3:71764254-71764273 Msa0138630:CDS 45.0%
TGGCTTGAAAGATGACCTAG+TGG + chr1_3:71764337-71764356 Msa0138630:CDS 45.0%
GCAAAAGGGCTAACCAATGT+TGG - chr1_3:71764395-71764414 None:intergenic 45.0%
!! TGGTTAGCCCTTTTGCTAGA+AGG + chr1_3:71764399-71764418 Msa0138630:CDS 45.0%
GGAAGTCTCCTTCTAGCAAA+AGG - chr1_3:71764410-71764429 None:intergenic 45.0%
AGCATACCTTGGCATTCCAA+TGG + chr1_3:71764473-71764492 Msa0138630:CDS 45.0%
TTCAGGGGGTAAACTTCTAC+TGG + chr1_3:71764604-71764623 Msa0138630:intron 45.0%
!! AATCGGATTCTAAGACCTGG+TGG + chr1_3:71764632-71764651 Msa0138630:CDS 45.0%
! GACATGATGAAGTATCCACC+AGG - chr1_3:71764650-71764669 None:intergenic 45.0%
TTCCCCTCTGATTCTAAGCA+TGG + chr1_3:71764782-71764801 Msa0138630:intron 45.0%
AACCAGGTGTATGTAAAGGG+TGG + chr1_3:71764876-71764895 Msa0138630:intron 45.0%
TACCACCCTTTACATACACC+TGG - chr1_3:71764881-71764900 None:intergenic 45.0%
ATAAGGACAAGAGAAACGCG+TGG + chr1_3:71765018-71765037 Msa0138630:intron 45.0%
!! CGGTTTTGTAGGGTTGAGTT+AGG - chr1_3:71765295-71765314 None:intergenic 45.0%
GTCATGCGTAACCATTCATG+GGG - chr1_3:71765403-71765422 None:intergenic 45.0%
GAATGGTTACGCATGACTTG+AGG + chr1_3:71765406-71765425 Msa0138630:intron 45.0%
ATGGTTACGCATGACTTGAG+GGG + chr1_3:71765408-71765427 Msa0138630:intron 45.0%
TGACTTGAGGGGCTTGATAA+TGG + chr1_3:71765419-71765438 Msa0138630:intron 45.0%
! GACTTGAGGGGCTTGATAAT+GGG + chr1_3:71765420-71765439 Msa0138630:intron 45.0%
GCCCACATAAAAACCTAAGC+TGG - chr1_3:71765458-71765477 None:intergenic 45.0%
GTTCAGTCTTAGGCGAGATA+AGG - chr1_3:71765547-71765566 None:intergenic 45.0%
CGCTTCAGATGTTCAGTCTT+AGG - chr1_3:71765557-71765576 None:intergenic 45.0%
CATCCGTTTCAAGGTTACTC+AGG - chr1_3:71765583-71765602 None:intergenic 45.0%
ACAAATAGAGGCTGTCAGTG+CGG - chr1_3:71765696-71765715 None:intergenic 45.0%
CACTGACAGCCTCTATTTGT+TGG + chr1_3:71765696-71765715 Msa0138630:CDS 45.0%
GGAAAAGTTTCGAGCCTCTT+CGG - chr1_3:71766035-71766054 None:intergenic 45.0%
AACTATGGCGTTCCAATGGT+TGG - chr1_3:71766096-71766115 None:intergenic 45.0%
ACGCCTCAAAAGCAGGTATT+CGG + chr1_3:71766640-71766659 Msa0138630:intron 45.0%
!! TTCCCGAATACCTGCTTTTG+AGG - chr1_3:71766646-71766665 None:intergenic 45.0%
TATCTCGATCACTTACGCAG+AGG + chr1_3:71766887-71766906 Msa0138630:intron 45.0%
GTGCACAGAAAACTCTATGG+AGG + chr1_3:71767177-71767196 Msa0138630:CDS 45.0%
GCGCCCTCATAAGAAAGAAG+TGG + chr1_3:71762568-71762587 Msa0138630:CDS 50.0%
GTGGCCTGAGAGCAAATTGA+AGG + chr1_3:71763030-71763049 Msa0138630:CDS 50.0%
TAGCCTACTAGGGTCTGGTT+TGG + chr1_3:71763418-71763437 Msa0138630:intron 50.0%
!! CATCGTTGGTTGGTGGATTC+TGG + chr1_3:71763822-71763841 Msa0138630:CDS 50.0%
GCAGCTGCTCTCTTCGATAA+GGG + chr1_3:71764296-71764315 Msa0138630:CDS 50.0%
CCACTTGAGCTAAGTCCACT+AGG - chr1_3:71764355-71764374 None:intergenic 50.0%
!! CCTAGTGGACTTAGCTCAAG+TGG + chr1_3:71764352-71764371 Msa0138630:CDS 50.0%
!! TTGAGGGGCTTGATAATGGG+TGG + chr1_3:71765423-71765442 Msa0138630:intron 50.0%
GTGGCCTAATGTACCAGCTT+AGG + chr1_3:71765442-71765461 Msa0138630:intron 50.0%
ATGAAAATCCCGACGCAGTC+TGG + chr1_3:71765840-71765859 Msa0138630:CDS 50.0%
! GGCTCGAAACTTTTCCTGAC+TGG + chr1_3:71766039-71766058 Msa0138630:CDS 50.0%
TGTAGTACCTGTCCATGCAC+CGG + chr1_3:71766502-71766521 Msa0138630:CDS 50.0%
! CACGATTGGTGCGAGTCTTT+TGG + chr1_3:71766569-71766588 Msa0138630:CDS 50.0%
TGTTCTCACGCCTCAAAAGC+AGG + chr1_3:71766633-71766652 Msa0138630:CDS 50.0%
CGCCTCAAAAGCAGGTATTC+GGG + chr1_3:71766641-71766660 Msa0138630:intron 50.0%
! ATCAAGTCATGGTGGGACTC+TGG - chr1_3:71767254-71767273 None:intergenic 50.0%
! GTGGTGGAAAGGTGCAGTAC+CGG + chr1_3:71762927-71762946 Msa0138630:CDS 55.0%
!! AAAGGTGCAGTACCGGCACA+CGG + chr1_3:71762934-71762953 Msa0138630:CDS 55.0%
ACACGGAGAGGAGTTGTCCA+AGG + chr1_3:71762951-71762970 Msa0138630:CDS 55.0%
CGCAGCTGCTCTCTTCGATA+AGG + chr1_3:71764295-71764314 Msa0138630:CDS 55.0%
GTGCACGTTGCAGCATACCT+TGG + chr1_3:71764462-71764481 Msa0138630:CDS 55.0%
CGTAACCATTCATGGGGCGT+CGG - chr1_3:71765397-71765416 None:intergenic 55.0%
AGCAGCATACCAGACTGCGT+CGG - chr1_3:71765852-71765871 None:intergenic 55.0%
TTGAACAGCATGGGGCAGAG+TGG + chr1_3:71765997-71766016 Msa0138630:CDS 55.0%
TGATCGCGGACACCAACCAT+TGG + chr1_3:71766081-71766100 Msa0138630:CDS 55.0%
GCTGGCATACCCTCCATAGA+TGG - chr1_3:71766186-71766205 None:intergenic 55.0%
ATGGACCGTATCTTACGGCC+AGG + chr1_3:71767038-71767057 Msa0138630:CDS 55.0%
ACCGTATCTTACGGCCAGGA+GGG + chr1_3:71767042-71767061 Msa0138630:CDS 55.0%
ACCCTCCTGGCCGTAAGATA+CGG - chr1_3:71767046-71767065 None:intergenic 55.0%
CGTATGATCGTCAACCCTCC+TGG - chr1_3:71767059-71767078 None:intergenic 55.0%
GACAACTCCTCTCCGTGTGC+CGG - chr1_3:71762949-71762968 None:intergenic 60.0%
! GTTATGAGTCTCCGGTGCCG+TGG + chr1_3:71763011-71763030 Msa0138630:CDS 60.0%
!! AACCATTCATGGGGCGTCGG+AGG - chr1_3:71765394-71765413 None:intergenic 60.0%
AGAGGCTGTCAGTGCGGTCA+TGG - chr1_3:71765690-71765709 None:intergenic 60.0%
GCAGCATACCAGACTGCGTC+GGG - chr1_3:71765851-71765870 None:intergenic 60.0%
AGCCTCTTCGGCCATTCCTC+AGG - chr1_3:71766023-71766042 None:intergenic 60.0%
AGCGTATCCGGTGCATGGAC+AGG - chr1_3:71766512-71766531 None:intergenic 60.0%
! TGGGAAGCGTATCCGGTGCA+TGG - chr1_3:71766517-71766536 None:intergenic 60.0%
GACCGTATCTTACGGCCAGG+AGG + chr1_3:71767041-71767060 Msa0138630:CDS 60.0%
!! TGCAGTACCGGCACACGGAG+AGG + chr1_3:71762939-71762958 Msa0138630:CDS 65.0%
TTGCTCTCAGGCCACGGCAC+CGG - chr1_3:71763025-71763044 None:intergenic 65.0%
GCTCAAGTGGCACTCGAGCG+CGG + chr1_3:71764365-71764384 Msa0138630:CDS 65.0%
CGAGCGCGGCTTCCCAACAT+TGG + chr1_3:71764379-71764398 Msa0138630:CDS 65.0%
CACCTCCGACGCCCCATGAA+TGG + chr1_3:71765389-71765408 Msa0138630:intron 65.0%
GGGCAGAGTGGCCTGAGGAA+TGG + chr1_3:71766009-71766028 Msa0138630:CDS 65.0%
GGCCTGAGGAATGGCCGAAG+AGG + chr1_3:71766018-71766037 Msa0138630:CDS 65.0%
GCATGGGGCAGAGTGGCCTG+AGG + chr1_3:71766004-71766023 Msa0138630:CDS 70.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 71762260 71767550 71762260 ID=Msa0138630;Name=Msa0138630
chr1_3 mRNA 71762260 71767550 71762260 ID=Msa0138630-mRNA-1;Parent=Msa0138630;Name=Msa0138630-mRNA-1;_AED=0.09;_eAED=0.09;_QI=0|1|0.87|1|1|1|8|345|705
chr1_3 exon 71762260 71763051 71762260 ID=Msa0138630-mRNA-1:exon:24951;Parent=Msa0138630-mRNA-1
chr1_3 exon 71763771 71763920 71763771 ID=Msa0138630-mRNA-1:exon:24952;Parent=Msa0138630-mRNA-1
chr1_3 exon 71764224 71764494 71764224 ID=Msa0138630-mRNA-1:exon:24953;Parent=Msa0138630-mRNA-1
chr1_3 exon 71764609 71764701 71764609 ID=Msa0138630-mRNA-1:exon:24954;Parent=Msa0138630-mRNA-1
chr1_3 exon 71765687 71765861 71765687 ID=Msa0138630-mRNA-1:exon:24955;Parent=Msa0138630-mRNA-1
chr1_3 exon 71765953 71766195 71765953 ID=Msa0138630-mRNA-1:exon:24956;Parent=Msa0138630-mRNA-1
chr1_3 exon 71766460 71766654 71766460 ID=Msa0138630-mRNA-1:exon:24957;Parent=Msa0138630-mRNA-1
chr1_3 exon 71767007 71767550 71767007 ID=Msa0138630-mRNA-1:exon:24958;Parent=Msa0138630-mRNA-1
chr1_3 CDS 71762260 71763051 71762260 ID=Msa0138630-mRNA-1:cds;Parent=Msa0138630-mRNA-1
chr1_3 CDS 71763771 71763920 71763771 ID=Msa0138630-mRNA-1:cds;Parent=Msa0138630-mRNA-1
chr1_3 CDS 71764224 71764494 71764224 ID=Msa0138630-mRNA-1:cds;Parent=Msa0138630-mRNA-1
chr1_3 CDS 71764609 71764701 71764609 ID=Msa0138630-mRNA-1:cds;Parent=Msa0138630-mRNA-1
chr1_3 CDS 71765687 71765861 71765687 ID=Msa0138630-mRNA-1:cds;Parent=Msa0138630-mRNA-1
chr1_3 CDS 71765953 71766195 71765953 ID=Msa0138630-mRNA-1:cds;Parent=Msa0138630-mRNA-1
chr1_3 CDS 71766460 71766654 71766460 ID=Msa0138630-mRNA-1:cds;Parent=Msa0138630-mRNA-1
chr1_3 CDS 71767007 71767205 71767007 ID=Msa0138630-mRNA-1:cds;Parent=Msa0138630-mRNA-1
chr1_3 three_prime_UTR 71767206 71767550 71767206 ID=Msa0138630-mRNA-1:three_prime_utr;Parent=Msa0138630-mRNA-1
Gene Sequence

>Msa0138630

ATGGCTATTATACCTCGTCAAGCTAAAAGACCAACTGGGTTATGGGTGAAGATGACAGCTGTAACAATTTTGGGTCTCTGTTTTATTTTTGTTTGGACTGTGTTTTCTTCTTCATCTTCTTCTGTTAGTTTTCAAAGGGAAAGTTTTGAAGATATTTCAGAACCTGTTTCTTCTTCTTCTTCTTCTTCCAATGTTAAAAAACCAACACCAAAATCAGAAAAACGCGTGGAAGTGGAGAAAGATCATAAATTTCATAAGAGTGATGAGAAAAAGATTGATGATGGGTCATCTTCAAATTCTTCTTCTACGCGCCCTCATAAGAAAGAAGTGGCACGTGAGAAGAAACGTGTGCATAAGAAGGAGGATAATAATAAAGAGAATGTGAATCAAGGGTCATTGGAGAAAGAGGAAGAAGGTGAAAAAGAGTTGGAAGATAAAGAAGAAGGATTGGATCATGAGAGTGAAGTTGATTTGGATTCTGATGTTGTTGGTGGTGATGATTCAGCTGAATCCGTCGATGAAGATTCTGAGATATTGGAAGAGTTAAAGAAAACAAAGAAGGGAAAAGTGAAAGGACCTTTGTTTGAATCAAATGTTAACTATAGATGGAAAATGTGCAATACTAGAAGCAAGCATAACTATATTCCTTGCATTGATATCGAAGTAGGTGGTGGAAAGGTGCAGTACCGGCACACGGAGAGGAGTTGTCCAAGGATGCCCTTCATGTGTATGGTTCCTCTTCCTCTTGATGGTTATGAGTCTCCGGTGCCGTGGCCTGAGAGCAAATTGAAGATATTTTATAAGAATGTTGCACACCCGAAACTAGCTGCATATATTAAAAAACATCGTTGGTTGGTGGATTCTGGAGAATATCTTACTTTCCCTCAAAACCAGTCAGAATTTTTGGGAGGGATTCAGCACTATCTTGAGTCGATTGAAGAGATGGTACCAGACATTGAGTGGGGTAAAAATATTCGTGTTGTCCTGGACATTGGATGTACAGATTCAAGCTTCGCAGCTGCTCTCTTCGATAAGGGTGTTTTAACATTGTCACTTGGCTTGAAAGATGACCTAGTGGACTTAGCTCAAGTGGCACTCGAGCGCGGCTTCCCAACATTGGTTAGCCCTTTTGCTAGAAGGAGACTTCCTTTTCCAAGTCAAGTTTTTGATGCTATAAATTGTGCACGTTGCAGCATACCTTGGCATTCCAATGGGGGTAAACTTCTACTGGAGATGAATCGGATTCTAAGACCTGGTGGATACTTCATCATGTCAACTAAACATGATAGCATTGAAGAAGAAGAAGCCATGACCGCACTGACAGCCTCTATTTGTTGGAATGTTCTGGCACATAAAAGTGATGATGTTGGTGAAGTTGGAGTTAGAATATATCAAAAGCCTGAAGGAAATGACATATACGAATTGAGAAGGAAGAAGATCCCACCAATTTGCAAAGAAAATGAAAATCCCGACGCAGTCTGGCATGTTCCAATCAAGACTTGTTTGCACACCATTCCAATTGGAATTGAACAGCATGGGGCAGAGTGGCCTGAGGAATGGCCGAAGAGGCTCGAAACTTTTCCTGACTGGATGAACAATAAGGAGAAATTGATCGCGGACACCAACCATTGGAACGCCATAGTTAACAAGTCATATCTCAATGGAATGGGCATTAACTGGACAAATATCAGGAATGTAATGGACATGAAATCCATCTATGGAGGATTAGCTGCAGCTCTATCTAAACATAACGTTTGGGTGATGAATGTAGTACCTGTCCATGCACCGGATACGCTTCCCATAATTTTTGAACGGGGATTTTTTGGCGTCTATCACGATTGGTGCGAGTCTTTTGGTACTTATCCAAGAACTTATGACCTTCTGCATGCTGATCATTTGTTCTCACGCCTCAAAAGCAGGTGCAAGCAACCTGTGTCGATTGTTGTTGAGATGGACCGTATCTTACGGCCAGGAGGGTTGACGATCATACGTGATAAAGTTGAAATCCTAAATGCATTGGAGGAAATATTGAGAAGTATGCAATGGGAAATCAGAATGACTTTCTACCAGGAAAAAGAGGGTATCTTATGTGCACAGAAAACTCTATGGAGGCCTTGA
Protein sequence

>Msa0138630

MAIIPRQAKRPTGLWVKMTAVTILGLCFIFVWTVFSSSSSSVSFQRESFEDISEPVSSSSSSSNVKKPTPKSEKRVEVEKDHKFHKSDEKKIDDGSSSNSSSTRPHKKEVAREKKRVHKKEDNNKENVNQGSLEKEEEGEKELEDKEEGLDHESEVDLDSDVVGGDDSAESVDEDSEILEELKKTKKGKVKGPLFESNVNYRWKMCNTRSKHNYIPCIDIEVGGGKVQYRHTERSCPRMPFMCMVPLPLDGYESPVPWPESKLKIFYKNVAHPKLAAYIKKHRWLVDSGEYLTFPQNQSEFLGGIQHYLESIEEMVPDIEWGKNIRVVLDIGCTDSSFAAALFDKGVLTLSLGLKDDLVDLAQVALERGFPTLVSPFARRRLPFPSQVFDAINCARCSIPWHSNGGKLLLEMNRILRPGGYFIMSTKHDSIEEEEAMTALTASICWNVLAHKSDDVGEVGVRIYQKPEGNDIYELRRKKIPPICKENENPDAVWHVPIKTCLHTIPIGIEQHGAEWPEEWPKRLETFPDWMNNKEKLIADTNHWNAIVNKSYLNGMGINWTNIRNVMDMKSIYGGLAAALSKHNVWVMNVVPVHAPDTLPIIFERGFFGVYHDWCESFGTYPRTYDLLHADHLFSRLKSRCKQPVSIVVEMDRILRPGGLTIIRDKVEILNALEEILRSMQWEIRMTFYQEKEGILCAQKTLWRP*