Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0701920 | AFK34818.1 | 64.894 | 94 | 8 | 1 | 26 | 94 | 89 | 182 | 1.70e-30 | 119 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0701920 | sp|Q8L7W0|SH3P3_ARATH | 41.071 | 112 | 39 | 2 | 10 | 96 | 237 | 346 | 3.52e-21 | 91.7 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0701920 | I3S3H6 | 64.894 | 94 | 8 | 1 | 26 | 94 | 89 | 182 | 8.13e-31 | 119 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003890 | Msa0701920 | 0.803282 | 3.756118e-49 | -8.615850e-47 |
| Msa0007440 | Msa0701920 | 0.818631 | 1.772290e-52 | -8.615850e-47 |
| Msa0011960 | Msa0701920 | 0.830836 | 2.346878e-55 | -8.615850e-47 |
| Msa0012080 | Msa0701920 | 0.803228 | 3.852938e-49 | -8.615850e-47 |
| Msa0020420 | Msa0701920 | 0.804742 | 1.866320e-49 | -8.615850e-47 |
| Msa0027770 | Msa0701920 | 0.818739 | 1.675136e-52 | -8.615850e-47 |
| Msa0028660 | Msa0701920 | 0.808327 | 3.270992e-50 | -8.615850e-47 |
| Msa0032090 | Msa0701920 | 0.826866 | 2.144518e-54 | -8.615850e-47 |
| Msa0032430 | Msa0701920 | 0.817066 | 3.999180e-52 | -8.615850e-47 |
| Msa0032580 | Msa0701920 | 0.831324 | 1.780749e-55 | -8.615850e-47 |
| Msa0033980 | Msa0701920 | 0.805013 | 1.638807e-49 | -8.615850e-47 |
| Msa0043660 | Msa0701920 | 0.800003 | 1.767349e-48 | -8.615850e-47 |
| Msa0044540 | Msa0701920 | -0.806146 | 9.477902e-50 | -8.615850e-47 |
| Msa0052640 | Msa0701920 | 0.801760 | 7.732424e-49 | -8.615850e-47 |
| Msa0052770 | Msa0701920 | 0.826895 | 2.110340e-54 | -8.615850e-47 |
| Msa0054440 | Msa0701920 | 0.814694 | 1.352479e-51 | -8.615850e-47 |
| Msa0054480 | Msa0701920 | 0.807791 | 4.254352e-50 | -8.615850e-47 |
| Msa0061080 | Msa0701920 | 0.803216 | 3.874355e-49 | -8.615850e-47 |
| Msa0063530 | Msa0701920 | 0.830240 | 3.282068e-55 | -8.615850e-47 |
| Msa0067990 | Msa0701920 | 0.800283 | 1.549974e-48 | -8.615850e-47 |
| Msa0075500 | Msa0701920 | 0.809507 | 1.828982e-50 | -8.615850e-47 |
| Msa0078900 | Msa0701920 | 0.815824 | 7.582725e-52 | -8.615850e-47 |
| Msa0079380 | Msa0701920 | 0.819439 | 1.160715e-52 | -8.615850e-47 |
| Msa0081930 | Msa0701920 | 0.806526 | 7.882984e-50 | -8.615850e-47 |
| Msa0083310 | Msa0701920 | 0.800291 | 1.543887e-48 | -8.615850e-47 |
| Msa0084380 | Msa0701920 | 0.802512 | 5.415858e-49 | -8.615850e-47 |
| Msa0091250 | Msa0701920 | -0.802976 | 4.343873e-49 | -8.615850e-47 |
| Msa0105620 | Msa0701920 | 0.814552 | 1.453795e-51 | -8.615850e-47 |
| Msa0115270 | Msa0701920 | 0.804189 | 2.434673e-49 | -8.615850e-47 |
| Msa0610430 | Msa0701920 | 0.820811 | 5.631092e-53 | -8.615850e-47 |
| Msa0615490 | Msa0701920 | 0.821142 | 4.724896e-53 | -8.615850e-47 |
| Msa0616240 | Msa0701920 | 0.807502 | 4.898670e-50 | -8.615850e-47 |
| Msa0617640 | Msa0701920 | 0.825882 | 3.679197e-54 | -8.615850e-47 |
| Msa0621490 | Msa0701920 | 0.814618 | 1.405445e-51 | -8.615850e-47 |
| Msa0623790 | Msa0701920 | 0.802078 | 6.653748e-49 | -8.615850e-47 |
| Msa0625720 | Msa0701920 | 0.833921 | 4.040296e-56 | -8.615850e-47 |
| Msa0632870 | Msa0701920 | 0.803328 | 3.673416e-49 | -8.615850e-47 |
| Msa0641670 | Msa0701920 | 0.806630 | 7.491775e-50 | -8.615850e-47 |
| Msa0643560 | Msa0701920 | 0.819591 | 1.071648e-52 | -8.615850e-47 |
| Msa0663390 | Msa0701920 | 0.826180 | 3.125549e-54 | -8.615850e-47 |
| Msa0675410 | Msa0701920 | 0.809274 | 2.051429e-50 | -8.615850e-47 |
| Msa0685140 | Msa0701920 | 0.812869 | 3.411506e-51 | -8.615850e-47 |
| Msa0688960 | Msa0701920 | 0.812633 | 3.843664e-51 | -8.615850e-47 |
| Msa0691380 | Msa0701920 | 0.821111 | 4.803699e-53 | -8.615850e-47 |
| Msa0692830 | Msa0701920 | 0.828305 | 9.678779e-55 | -8.615850e-47 |
| Msa0692950 | Msa0701920 | 0.821234 | 4.499130e-53 | -8.615850e-47 |
| Msa0698540 | Msa0701920 | 0.821742 | 3.434271e-53 | -8.615850e-47 |
| Msa0699570 | Msa0701920 | 0.806398 | 8.387266e-50 | -8.615850e-47 |
| Msa0701900 | Msa0701920 | 0.813839 | 2.089082e-51 | -8.615850e-47 |
| Msa0701920 | Msa0706400 | 0.810143 | 1.334318e-50 | -8.615850e-47 |
| Msa0701920 | Msa0711780 | 0.812442 | 4.230206e-51 | -8.615850e-47 |
| Msa0701920 | Msa0715700 | 0.802502 | 5.442017e-49 | -8.615850e-47 |
| Msa0701920 | Msa0716840 | 0.851083 | 1.118265e-60 | -8.615850e-47 |
| Msa0701920 | Msa0743950 | 0.819395 | 1.188075e-52 | -8.615850e-47 |
| Msa0701920 | Msa0745790 | 0.815938 | 7.150999e-52 | -8.615850e-47 |
| Msa0701920 | Msa0762970 | 0.801283 | 9.688202e-49 | -8.615850e-47 |
| Msa0701920 | Msa0769920 | 0.815514 | 8.893098e-52 | -8.615850e-47 |
| Msa0701920 | Msa0784860 | 0.809346 | 1.980604e-50 | -8.615850e-47 |
| Msa0701920 | Msa0790510 | 0.804079 | 2.565653e-49 | -8.615850e-47 |
| Msa0701920 | Msa0793800 | 0.805122 | 1.554695e-49 | -8.615850e-47 |
| Msa0701920 | Msa0794670 | 0.812059 | 5.127918e-51 | -8.615850e-47 |
| Msa0701920 | Msa0795090 | 0.810550 | 1.090256e-50 | -8.615850e-47 |
| Msa0701920 | Msa0804230 | 0.803356 | 3.625688e-49 | -8.615850e-47 |
| Msa0701920 | Msa0808270 | 0.800301 | 1.536846e-48 | -8.615850e-47 |
| Msa0701920 | Msa0812570 | 0.803351 | 3.633611e-49 | -8.615850e-47 |
| Msa0701920 | Msa0816700 | 0.819184 | 1.326978e-52 | -8.615850e-47 |
| Msa0701920 | Msa0850960 | 0.815749 | 7.880635e-52 | -8.615850e-47 |
| Msa0701920 | Msa0864250 | 0.812279 | 4.591442e-51 | -8.615850e-47 |
| Msa0701920 | Msa0897330 | 0.801177 | 1.018411e-48 | -8.615850e-47 |
| Msa0701920 | Msa0909110 | 0.809527 | 1.810422e-50 | -8.615850e-47 |
| Msa0701920 | Msa0920610 | 0.815109 | 1.093776e-51 | -8.615850e-47 |
| Msa0701920 | Msa0926850 | 0.815677 | 8.178259e-52 | -8.615850e-47 |
| Msa0701920 | Msa0935410 | 0.804252 | 2.361497e-49 | -8.615850e-47 |
| Msa0701920 | Msa0938220 | 0.804391 | 2.209741e-49 | -8.615850e-47 |
| Msa0701920 | Msa0945440 | 0.810765 | 9.794039e-51 | -8.615850e-47 |
| Msa0701920 | Msa0945970 | 0.808694 | 2.731028e-50 | -8.615850e-47 |
| Msa0701920 | Msa0959360 | 0.813873 | 2.053044e-51 | -8.615850e-47 |
| Msa0701920 | Msa1003320 | 0.802487 | 5.482002e-49 | -8.615850e-47 |
| Msa0701920 | Msa1003620 | 0.823054 | 1.702306e-53 | -8.615850e-47 |
| Msa0701920 | Msa1009820 | 0.834983 | 2.185573e-56 | -8.615850e-47 |
| Msa0701920 | Msa1012830 | 0.802008 | 6.877209e-49 | -8.615850e-47 |
| Msa0701920 | Msa1014540 | 0.814519 | 1.478467e-51 | -8.615850e-47 |
| Msa0701920 | Msa1037420 | 0.814947 | 1.188458e-51 | -8.615850e-47 |
| Msa0701920 | Msa1039140 | 0.813031 | 3.144900e-51 | -8.615850e-47 |
| Msa0701920 | Msa1046460 | 0.829053 | 6.382422e-55 | -8.615850e-47 |
| Msa0701920 | Msa1051200 | 0.838801 | 2.317068e-57 | -8.615850e-47 |
| Msa0701920 | Msa1075650 | 0.802464 | 5.539998e-49 | -8.615850e-47 |
| Msa0701920 | Msa1087710 | 0.811485 | 6.838622e-51 | -8.615850e-47 |
| Msa0701920 | Msa1088640 | 0.809946 | 1.471353e-50 | -8.615850e-47 |
| Msa0701920 | Msa1089020 | 0.813230 | 2.844090e-51 | -8.615850e-47 |
| Msa0701920 | Msa1103980 | 0.801183 | 1.015572e-48 | -8.615850e-47 |
| Msa0701920 | Msa1104090 | 0.811964 | 5.378453e-51 | -8.615850e-47 |
| Msa0701920 | Msa1106700 | 0.806329 | 8.672267e-50 | -8.615850e-47 |
| Msa0701920 | Msa1113170 | 0.806332 | 8.658263e-50 | -8.615850e-47 |
| Msa0701920 | Msa1137700 | 0.842005 | 3.366434e-58 | -8.615850e-47 |
| Msa0701920 | Msa1172400 | 0.802307 | 5.968811e-49 | -8.615850e-47 |
| Msa0701920 | Msa1173140 | 0.820877 | 5.437614e-53 | -8.615850e-47 |
| Msa0701920 | Msa1180500 | 0.804642 | 1.958877e-49 | -8.615850e-47 |
| Msa0701920 | Msa1181250 | 0.812985 | 3.218491e-51 | -8.615850e-47 |
| Msa0701920 | Msa1181330 | 0.806956 | 6.392590e-50 | -8.615850e-47 |
| Msa0701920 | Msa1197410 | 0.805448 | 1.328742e-49 | -8.615850e-47 |
| Msa0701920 | Msa1199220 | 0.805422 | 1.344936e-49 | -8.615850e-47 |
| Msa0701920 | Msa1203250 | 0.806017 | 1.008761e-49 | -8.615850e-47 |
| Msa0701920 | Msa1204530 | 0.802919 | 4.463639e-49 | -8.615850e-47 |
| Msa0701920 | Msa1208880 | 0.812449 | 4.216489e-51 | -8.615850e-47 |
| Msa0701920 | Msa1217470 | 0.804769 | 1.842598e-49 | -8.615850e-47 |
| Msa0701920 | Msa1224810 | 0.809648 | 1.705408e-50 | -8.615850e-47 |
| Msa0701920 | Msa1231840 | 0.803493 | 3.395129e-49 | -8.615850e-47 |
| Msa0701920 | Msa1233890 | 0.810192 | 1.302428e-50 | -8.615850e-47 |
| Msa0701920 | Msa1245930 | 0.808666 | 2.768566e-50 | -8.615850e-47 |
| Msa0701920 | Msa1250890 | 0.801335 | 9.451874e-49 | -8.615850e-47 |
| Msa0701920 | Msa1259060 | 0.807403 | 5.140686e-50 | -8.615850e-47 |
| Msa0701920 | Msa1287460 | 0.817975 | 2.494645e-52 | -8.615850e-47 |
| Msa0701920 | Msa1302850 | 0.801280 | 9.699981e-49 | -8.615850e-47 |
| Msa0701920 | Msa1305340 | 0.809406 | 1.921917e-50 | -8.615850e-47 |
| Msa0701920 | Msa1312520 | 0.812237 | 4.690076e-51 | -8.615850e-47 |
| Msa0701920 | Msa1331000 | 0.801792 | 7.619315e-49 | -8.615850e-47 |
| Msa0701920 | Msa1340470 | 0.801502 | 8.736474e-49 | -8.615850e-47 |
| Msa0701920 | Msa1348490 | 0.829584 | 4.744762e-55 | -8.615850e-47 |
| Msa0701920 | Msa1386780 | 0.803019 | 4.256138e-49 | -8.615850e-47 |
| Msa0701920 | Msa1389800 | 0.814633 | 1.394741e-51 | -8.615850e-47 |
| Msa0701920 | Msa1394290 | 0.802724 | 4.898037e-49 | -8.615850e-47 |
| Msa0701920 | Msa1400580 | 0.810469 | 1.134972e-50 | -8.615850e-47 |
| Msa0701920 | Msa1403340 | 0.802780 | 4.768671e-49 | -8.615850e-47 |
| Msa0701920 | Msa1410100 | 0.833234 | 5.994293e-56 | -8.615850e-47 |
| Msa0701920 | Msa1415640 | 0.802729 | 4.885566e-49 | -8.615850e-47 |
| Msa0701920 | Msa1416150 | 0.831662 | 1.470078e-55 | -8.615850e-47 |
| Msa0701920 | Msa1419960 | 0.816732 | 4.751247e-52 | -8.615850e-47 |
| Msa0701920 | Msa1423350 | 0.807489 | 4.930595e-50 | -8.615850e-47 |
| Msa0701920 | Msa1424750 | 0.801217 | 9.994092e-49 | -8.615850e-47 |
| Msa0701920 | Msa1426030 | 0.816834 | 4.506984e-52 | -8.615850e-47 |
| Msa0701920 | Msa1427230 | 0.807495 | 4.916588e-50 | -8.615850e-47 |
| Msa0701920 | Msa1432420 | 0.809845 | 1.547380e-50 | -8.615850e-47 |
| Msa0701920 | Msa1442700 | 0.821490 | 3.928125e-53 | -8.615850e-47 |
| Msa0701920 | Msa1443850 | 0.834054 | 3.740404e-56 | -8.615850e-47 |
| Msa0701920 | Msa1454480 | 0.800643 | 1.308765e-48 | -8.615850e-47 |
| Msa0701920 | Msa1457920 | 0.800866 | 1.178590e-48 | -8.615850e-47 |
| Msa0701920 | Msa1460830 | 0.806732 | 7.130082e-50 | -8.615850e-47 |
| Msa0701920 | Msa1466540 | 0.808491 | 3.017219e-50 | -8.615850e-47 |
| Msa0126610 | Msa0701920 | 0.804501 | 2.095867e-49 | -8.615850e-47 |
| Msa0127020 | Msa0701920 | 0.819589 | 1.072626e-52 | -8.615850e-47 |
| Msa0127050 | Msa0701920 | 0.803774 | 2.969377e-49 | -8.615850e-47 |
| Msa0135380 | Msa0701920 | 0.808332 | 3.262868e-50 | -8.615850e-47 |
| Msa0136070 | Msa0701920 | 0.812831 | 3.478599e-51 | -8.615850e-47 |
| Msa0150820 | Msa0701920 | 0.818297 | 2.109985e-52 | -8.615850e-47 |
| Msa0160550 | Msa0701920 | 0.862935 | 3.561563e-64 | -8.615850e-47 |
| Msa0165220 | Msa0701920 | 0.800477 | 1.415094e-48 | -8.615850e-47 |
| Msa0165660 | Msa0701920 | 0.822262 | 2.602864e-53 | -8.615850e-47 |
| Msa0168230 | Msa0701920 | 0.804434 | 2.164803e-49 | -8.615850e-47 |
| Msa0169280 | Msa0701920 | 0.818632 | 1.771336e-52 | -8.615850e-47 |
| Msa0171540 | Msa0701920 | 0.815555 | 8.705987e-52 | -8.615850e-47 |
| Msa0172070 | Msa0701920 | 0.818975 | 1.480336e-52 | -8.615850e-47 |
| Msa0172970 | Msa0701920 | 0.820638 | 6.169497e-53 | -8.615850e-47 |
| Msa0187120 | Msa0701920 | 0.807974 | 3.888763e-50 | -8.615850e-47 |
| Msa0193120 | Msa0701920 | 0.800757 | 1.240895e-48 | -8.615850e-47 |
| Msa0197660 | Msa0701920 | 0.811594 | 6.474923e-51 | -8.615850e-47 |
| Msa0222890 | Msa0701920 | 0.837650 | 4.587574e-57 | -8.615850e-47 |
| Msa0372340 | Msa0701920 | 0.801534 | 8.604223e-49 | -8.615850e-47 |
| Msa0383500 | Msa0701920 | 0.816068 | 6.690611e-52 | -8.615850e-47 |
| Msa0383800 | Msa0701920 | 0.818432 | 1.966092e-52 | -8.615850e-47 |
| Msa0397540 | Msa0701920 | 0.816932 | 4.285722e-52 | -8.615850e-47 |
| Msa0402790 | Msa0701920 | 0.805315 | 1.416801e-49 | -8.615850e-47 |
| Msa0432770 | Msa0701920 | 0.809858 | 1.536872e-50 | -8.615850e-47 |
| Msa0434180 | Msa0701920 | 0.809278 | 2.047597e-50 | -8.615850e-47 |
| Msa0480000 | Msa0701920 | 0.801451 | 8.949058e-49 | -8.615850e-47 |
| Msa0481530 | Msa0701920 | 0.825624 | 4.236007e-54 | -8.615850e-47 |
| Msa0239800 | Msa0701920 | 0.809878 | 1.521745e-50 | -8.615850e-47 |
| Msa0241470 | Msa0701920 | 0.814381 | 1.586308e-51 | -8.615850e-47 |
| Msa0260680 | Msa0701920 | 0.809048 | 2.293976e-50 | -8.615850e-47 |
| Msa0262340 | Msa0701920 | 0.811701 | 6.138638e-51 | -8.615850e-47 |
| Msa0279220 | Msa0701920 | 0.838159 | 3.392668e-57 | -8.615850e-47 |
| Msa0279240 | Msa0701920 | 0.827506 | 1.506599e-54 | -8.615850e-47 |
| Msa0279700 | Msa0701920 | 0.801515 | 8.684145e-49 | -8.615850e-47 |
| Msa0280090 | Msa0701920 | 0.809065 | 2.274780e-50 | -8.615850e-47 |
| Msa0289250 | Msa0701920 | 0.822730 | 2.025829e-53 | -8.615850e-47 |
| Msa0292120 | Msa0701920 | 0.804714 | 1.891573e-49 | -8.615850e-47 |
| Msa0303380 | Msa0701920 | 0.817003 | 4.130411e-52 | -8.615850e-47 |
| Msa0306710 | Msa0701920 | 0.803453 | 3.460349e-49 | -8.615850e-47 |
| Msa0309750 | Msa0701920 | 0.805533 | 1.274839e-49 | -8.615850e-47 |
| Msa0309770 | Msa0701920 | 0.844321 | 8.129628e-59 | -8.615850e-47 |
| Msa0317510 | Msa0701920 | 0.805072 | 1.592377e-49 | -8.615850e-47 |
| Msa0318980 | Msa0701920 | 0.829379 | 5.319027e-55 | -8.615850e-47 |
| Msa0333030 | Msa0701920 | 0.812253 | 4.653404e-51 | -8.615850e-47 |
| Msa0337620 | Msa0701920 | 0.833884 | 4.125850e-56 | -8.615850e-47 |
| Msa0363680 | Msa0701920 | 0.839060 | 1.986455e-57 | -8.615850e-47 |
| Msa0529890 | Msa0701920 | 0.831832 | 1.335002e-55 | -8.615850e-47 |
| Msa0541360 | Msa0701920 | 0.811932 | 5.466505e-51 | -8.615850e-47 |
| Msa0542090 | Msa0701920 | 0.820646 | 6.145620e-53 | -8.615850e-47 |
| Msa0542130 | Msa0701920 | 0.819065 | 1.412430e-52 | -8.615850e-47 |
| Msa0584860 | Msa0701920 | 0.804955 | 1.685060e-49 | -8.615850e-47 |
| Msa0585560 | Msa0701920 | 0.827467 | 1.539605e-54 | -8.615850e-47 |
| Msa0592440 | Msa0701920 | 0.808515 | 2.981781e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0701920 | MtrunA17_Chr8g0380121 | 64.211 | 95 | 9 | 1 | 26 | 95 | 248 | 342 | 1.65e-33 | 121 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0701920 | AT4G18060.1 | 41.071 | 112 | 39 | 2 | 10 | 96 | 237 | 346 | 3.58e-22 | 91.7 |
Find 37 sgRNAs with CRISPR-Local
Find 166 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCCTTCTGACCACCCTGTT+TGG | 0.277296 | 4_4:-73358080 | None:intergenic |
| AAAGGAGGGTGGTTTCCTTC+TGG | 0.305425 | 4_4:+73358114 | Msa0701920:CDS |
| TTCTCCAGCCATGTGCTAGA+TGG | 0.335775 | 4_4:-73358162 | None:intergenic |
| AGAGAAAACAATGTACTTCT+TGG | 0.347005 | 4_4:+73356663 | Msa0701920:CDS |
| GTTACACAGGTGAGCCAAAC+AGG | 0.349387 | 4_4:+73358066 | Msa0701920:intron |
| GTAGAGGATGGTGGAATTGA+TGG | 0.368031 | 4_4:+73358282 | Msa0701920:CDS |
| CATGGCTGGAGAAGTTTACT+AGG | 0.416579 | 4_4:+73358172 | Msa0701920:CDS |
| TCTTTACATCTATGCGTTGA+AGG | 0.429127 | 4_4:+73356077 | Msa0701920:CDS |
| CATTATTTCGTCTGTAAAGA+TGG | 0.433288 | 4_4:+73356103 | Msa0701920:CDS |
| CTCGAGCTAGCTCAGTCCTT+AGG | 0.453195 | 4_4:-73358393 | None:intergenic |
| ATTCAAAGAAGATGAACAAA+AGG | 0.473270 | 4_4:+73358256 | Msa0701920:CDS |
| AATCCCATCTAGCACATGGC+TGG | 0.494413 | 4_4:+73358158 | Msa0701920:CDS |
| TCTCCAGCCATGTGCTAGAT+GGG | 0.504378 | 4_4:-73358161 | None:intergenic |
| GGAGAATGCAATGGTAAAGG+AGG | 0.517024 | 4_4:+73358099 | Msa0701920:CDS |
| AGCCAAACAGGGTGGTCAGA+AGG | 0.549155 | 4_4:+73358078 | Msa0701920:CDS |
| GATGAACAAAAGGAATGTAG+AGG | 0.553167 | 4_4:+73358266 | Msa0701920:CDS |
| GAAGGAGAATGCAATGGTAA+AGG | 0.558279 | 4_4:+73358096 | Msa0701920:CDS |
| TGACAGACAGAAGAAAGAAT+CGG | 0.562404 | 4_4:+73356609 | Msa0701920:CDS |
| CCATTCTGGGAGATAACGAC+TGG | 0.563563 | 4_4:-73356637 | None:intergenic |
| AACAATGTACTTCTTGGCTG+AGG | 0.565631 | 4_4:+73356669 | Msa0701920:CDS |
| AAAAGGAATGTAGAGGATGG+TGG | 0.572679 | 4_4:+73358273 | Msa0701920:CDS |
| AACAAAAGGAATGTAGAGGA+TGG | 0.582996 | 4_4:+73358270 | Msa0701920:CDS |
| GTTTACATGTGTGAAACCTA+AGG | 0.589454 | 4_4:+73358377 | Msa0701920:CDS |
| ATTCTGTGATAACAGACAAG+AGG | 0.600167 | 4_4:-73358313 | None:intergenic |
| GTGGTTTCCTTCTGGCTGCG+TGG | 0.602408 | 4_4:+73358122 | Msa0701920:CDS |
| AATGCAATGGTAAAGGAGGG+TGG | 0.612541 | 4_4:+73358103 | Msa0701920:CDS |
| CCAGTCGTTATCTCCCAGAA+TGG | 0.618533 | 4_4:+73356637 | Msa0701920:CDS |
| GAGAATGCAATGGTAAAGGA+GGG | 0.624503 | 4_4:+73358100 | Msa0701920:CDS |
| TTCTGGGAGATAACGACTGG+AGG | 0.624938 | 4_4:-73356634 | None:intergenic |
| TCTGGGAGATAACGACTGGA+GGG | 0.630834 | 4_4:-73356633 | None:intergenic |
| AAAGAATCCCATCTAGCACA+TGG | 0.656686 | 4_4:+73358154 | Msa0701920:CDS |
| TGGTCAGAAGGAGAATGCAA+TGG | 0.665150 | 4_4:+73358090 | Msa0701920:CDS |
| GATGGTGGAATTGATGGAGA+TGG | 0.669831 | 4_4:+73358288 | Msa0701920:CDS |
| CTGGGAGATAACGACTGGAG+GGG | 0.689228 | 4_4:-73356632 | None:intergenic |
| TTACACAGGTGAGCCAAACA+GGG | 0.693041 | 4_4:+73358067 | Msa0701920:intron |
| CACAGGTGAGCCAAACAGGG+TGG | 0.732609 | 4_4:+73358070 | Msa0701920:intron |
| AAAGAATGAACAGCACAACG+AGG | 0.733190 | 4_4:-73358199 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CAAAAACAAATTTTTTTTAT+AGG | - | chr4_4:73356899-73356918 | None:intergenic | 10.0% |
| !!! | CTATAAAAAAAATTTGTTTT+TGG | + | chr4_4:73356897-73356916 | Msa0701920:intron | 10.0% |
| !!! | GTAAAAAAAAAATTTGTTTT+TGG | - | chr4_4:73357127-73357146 | None:intergenic | 10.0% |
| !!! | AAAACAAATTTTTTTTTTAC+AGG | + | chr4_4:73357127-73357146 | Msa0701920:intron | 10.0% |
| !!! | AAACAAATTTTTTTTTTACA+GGG | + | chr4_4:73357128-73357147 | Msa0701920:intron | 10.0% |
| !!! | TAAGAAAATAGATTTTTATA+AGG | - | chr4_4:73357203-73357222 | None:intergenic | 10.0% |
| !! | TTATAATAATAATCAATCTC+AGG | - | chr4_4:73356499-73356518 | None:intergenic | 15.0% |
| !! | ATTATAAAAAGGCTAAAATA+TGG | + | chr4_4:73356834-73356853 | Msa0701920:intron | 15.0% |
| !!! | TTAAAAAACAAAATTTTGCA+GGG | - | chr4_4:73356924-73356943 | None:intergenic | 15.0% |
| !!! | TTTAAAAAACAAAATTTTGC+AGG | - | chr4_4:73356925-73356944 | None:intergenic | 15.0% |
| !!! | AAAAAACAAAATATTTTGCA+GGG | - | chr4_4:73357023-73357042 | None:intergenic | 15.0% |
| !!! | TAAAAAACAAAATATTTTGC+AGG | - | chr4_4:73357024-73357043 | None:intergenic | 15.0% |
| !!! | AAAAAACAAAAAATTTTGCA+GGG | - | chr4_4:73357100-73357119 | None:intergenic | 15.0% |
| !!! | AAAAAAACAAAAAATTTTGC+AGG | - | chr4_4:73357099-73357118 | None:intergenic | 15.0% |
| !!! | AAAAAAACAAAAAATTTTGC+AGG | + | chr4_4:73357099-73357118 | Msa0701920:intron | 15.0% |
| !!! | AAAAAACAAAAAATTTTGCA+GGG | + | chr4_4:73357100-73357119 | Msa0701920:intron | 15.0% |
| !!! | ATTTTTATAAGGCTAAAATA+TGG | - | chr4_4:73357192-73357211 | None:intergenic | 15.0% |
| !!! | AGATTTTTGAAAAATCAATT+TGG | - | chr4_4:73357475-73357494 | None:intergenic | 15.0% |
| !!! | GATCTTAAAAAATTGTTTTT+TGG | + | chr4_4:73357726-73357745 | Msa0701920:intron | 15.0% |
| !!! | ATCCTGTTATATTTTTTTTT+AGG | + | chr4_4:73357944-73357963 | Msa0701920:intron | 15.0% |
| !!! | TCCTGTTATATTTTTTTTTA+GGG | + | chr4_4:73357945-73357964 | Msa0701920:intron | 15.0% |
| !!! | AATACTTTTTTGTTTGTTTG+GGG | - | chr4_4:73356154-73356173 | None:intergenic | 20.0% |
| !!! | CAATACTTTTTTGTTTGTTT+GGG | - | chr4_4:73356155-73356174 | None:intergenic | 20.0% |
| !!! | TCAATACTTTTTTGTTTGTT+TGG | - | chr4_4:73356156-73356175 | None:intergenic | 20.0% |
| !!! | ACAAAAAAGTATTGAAAATG+AGG | + | chr4_4:73356161-73356180 | Msa0701920:intron | 20.0% |
| !!! | TTACTATTGTTATTGTTATG+TGG | + | chr4_4:73356724-73356743 | Msa0701920:intron | 20.0% |
| !!! | ATAACCGAAAATTATTGTTT+TGG | + | chr4_4:73357420-73357439 | Msa0701920:intron | 20.0% |
| !!! | GAATCCAAAACAATAATTTT+CGG | - | chr4_4:73357427-73357446 | None:intergenic | 20.0% |
| !!! | TTGATTTTTCAAAAATCTTG+AGG | + | chr4_4:73357477-73357496 | Msa0701920:intron | 20.0% |
| !! | TCCCTAAAAAAAAATATAAC+AGG | - | chr4_4:73357949-73357968 | None:intergenic | 20.0% |
| !! | TTGACATTGATACATTTTCA+AGG | + | chr4_4:73356021-73356040 | Msa0701920:intron | 25.0% |
| ! | AATAATAATCAATCTCAGGA+TGG | - | chr4_4:73356495-73356514 | None:intergenic | 25.0% |
| ! | TCCTCATCATCATTATAAAA+AGG | + | chr4_4:73356823-73356842 | Msa0701920:intron | 25.0% |
| ! | ATGCAAATCATCACAAAAAT+GGG | - | chr4_4:73356960-73356979 | None:intergenic | 25.0% |
| ! | TATGCAAATCATCACAAAAA+TGG | - | chr4_4:73356961-73356980 | None:intergenic | 25.0% |
| !!! | TTGTTTTTTTAAATAGTCCC+TGG | + | chr4_4:73357065-73357084 | Msa0701920:intron | 25.0% |
| !!! | GTATTTTTACTTGCTTAGTT+TGG | + | chr4_4:73357234-73357253 | Msa0701920:intron | 25.0% |
| !! | AACTCTTATTTATCAGTTTG+AGG | + | chr4_4:73357293-73357312 | Msa0701920:intron | 25.0% |
| !! | ACTCTTATTTATCAGTTTGA+GGG | + | chr4_4:73357294-73357313 | Msa0701920:intron | 25.0% |
| ! | AAAATCTTGAGGACTAAAAT+TGG | + | chr4_4:73357488-73357507 | Msa0701920:intron | 25.0% |
| !! | GAAGTGACTTTTCAAATTTT+GGG | + | chr4_4:73357679-73357698 | Msa0701920:intron | 25.0% |
| !!! | AATTGTTTTTTGGAATCACA+TGG | + | chr4_4:73357736-73357755 | Msa0701920:intron | 25.0% |
| ! | CATGAAGTAATAAATTACAC+AGG | - | chr4_4:73357797-73357816 | None:intergenic | 25.0% |
| ! | TTACTTCATGAACTTATCTT+TGG | + | chr4_4:73357807-73357826 | Msa0701920:intron | 25.0% |
| !!! | ATGAAATTTGGTTGATGAAT+TGG | + | chr4_4:73357993-73358012 | Msa0701920:intron | 25.0% |
| !!! | CTGTGTAACATTTAGAATTT+TGG | - | chr4_4:73358055-73358074 | None:intergenic | 25.0% |
| ! | CAAAATTCTAAATGTTACAC+AGG | + | chr4_4:73358053-73358072 | Msa0701920:intron | 25.0% |
| ! | ATTCAAAGAAGATGAACAAA+AGG | + | chr4_4:73358256-73358275 | Msa0701920:CDS | 25.0% |
| ! | TGTACATTGACACATTTTCA+AGG | + | chr4_4:73355936-73355955 | Msa0701920:intron | 30.0% |
| GTAAATGAAAGCAATTTGCA+GGG | + | chr4_4:73355958-73355977 | Msa0701920:intron | 30.0% | |
| !!! | GTGAAAGCTTTATTTTTAGC+AGG | + | chr4_4:73356047-73356066 | Msa0701920:intron | 30.0% |
| CATTATTTCGTCTGTAAAGA+TGG | + | chr4_4:73356103-73356122 | Msa0701920:CDS | 30.0% | |
| GACTAAGGAAAATACTTGTT+AGG | - | chr4_4:73356228-73356247 | None:intergenic | 30.0% | |
| ! | ACAAGTATTTTCCTTAGTCT+TGG | + | chr4_4:73356229-73356248 | Msa0701920:intron | 30.0% |
| ! | CAACATCATGACATTTTATC+TGG | - | chr4_4:73356378-73356397 | None:intergenic | 30.0% |
| ! | TTTTGGTGAAATTGAAACTG+AGG | + | chr4_4:73356459-73356478 | Msa0701920:intron | 30.0% |
| TTTCTATGATTGCTAACAGT+TGG | + | chr4_4:73356563-73356582 | Msa0701920:intron | 30.0% | |
| AGAGAAAACAATGTACTTCT+TGG | + | chr4_4:73356663-73356682 | Msa0701920:CDS | 30.0% | |
| ATCTTAGGTTTAGAGAAATG+TGG | - | chr4_4:73356699-73356718 | None:intergenic | 30.0% | |
| TTTCTCTAAACCTAAGATGA+TGG | + | chr4_4:73356701-73356720 | Msa0701920:intron | 30.0% | |
| ACAATAGTAACCATCATCTT+AGG | - | chr4_4:73356714-73356733 | None:intergenic | 30.0% | |
| !! | GCCTTTTTATAATGATGATG+AGG | - | chr4_4:73356827-73356846 | None:intergenic | 30.0% |
| TGCAAATCATCACAAAAATG+GGG | - | chr4_4:73356959-73356978 | None:intergenic | 30.0% | |
| ! | TGAACCCATTTTGTAGTTTT+TGG | + | chr4_4:73356996-73357015 | Msa0701920:intron | 30.0% |
| !!! | TTTTTTTAAATAGTCCCTGG+AGG | + | chr4_4:73357068-73357087 | Msa0701920:intron | 30.0% |
| !!! | TTTTTTAAATAGTCCCTGGA+GGG | + | chr4_4:73357069-73357088 | Msa0701920:intron | 30.0% |
| !!! | TTTTTTAAATAGTCCCTCCA+GGG | - | chr4_4:73357085-73357104 | None:intergenic | 30.0% |
| !!! | TTTTTTTAAATAGTCCCTCC+AGG | - | chr4_4:73357086-73357105 | None:intergenic | 30.0% |
| ! | TTTACTTGCTTAGTTTGGTT+AGG | + | chr4_4:73357239-73357258 | Msa0701920:intron | 30.0% |
| ! | CTCTTATTTATCAGTTTGAG+GGG | + | chr4_4:73357295-73357314 | Msa0701920:intron | 30.0% |
| CCTTTCCTTTCAAGAAATTA+CGG | + | chr4_4:73357528-73357547 | Msa0701920:intron | 30.0% | |
| CTTTCCTTTCAAGAAATTAC+GGG | + | chr4_4:73357529-73357548 | Msa0701920:intron | 30.0% | |
| ACAACAAGAAAGAATTCACA+TGG | - | chr4_4:73357557-73357576 | None:intergenic | 30.0% | |
| !! | TCTAGTTCTTAAGCTTCAAA+GGG | + | chr4_4:73357642-73357661 | Msa0701920:intron | 30.0% |
| AAATTTGAAAAGTCACTTCC+TGG | - | chr4_4:73357678-73357697 | None:intergenic | 30.0% | |
| ! | GGAAGTGACTTTTCAAATTT+TGG | + | chr4_4:73357678-73357697 | Msa0701920:intron | 30.0% |
| TCATACAGAAATGCAAAAGA+CGG | - | chr4_4:73357708-73357727 | None:intergenic | 30.0% | |
| TACACAGGTTATTGTTCATA+AGG | - | chr4_4:73357782-73357801 | None:intergenic | 30.0% | |
| !! | AAAGGAACTTAGCTTTTCAA+AGG | + | chr4_4:73357880-73357899 | Msa0701920:intron | 30.0% |
| !! | AAGGAACTTAGCTTTTCAAA+GGG | + | chr4_4:73357881-73357900 | Msa0701920:intron | 30.0% |
| ACCAAATTTCATTATGACAG+TGG | - | chr4_4:73357985-73358004 | None:intergenic | 30.0% | |
| GGTAAATGAAAGCAATTTGC+AGG | + | chr4_4:73355957-73355976 | Msa0701920:intron | 35.0% | |
| TCTTTACATCTATGCGTTGA+AGG | + | chr4_4:73356077-73356096 | Msa0701920:CDS | 35.0% | |
| !!! | AGTATTTTCCTTAGTCTTGG+TGG | + | chr4_4:73356232-73356251 | Msa0701920:intron | 35.0% |
| GTTTACTGATATTGAAGACG+TGG | + | chr4_4:73356335-73356354 | Msa0701920:intron | 35.0% | |
| ! | TTAAGAGTTGCAGCTCTTTT+TGG | + | chr4_4:73356442-73356461 | Msa0701920:intron | 35.0% |
| TGACAGACAGAAGAAAGAAT+CGG | + | chr4_4:73356609-73356628 | Msa0701920:CDS | 35.0% | |
| ! | TTTGTGATGATTTGCATACG+TGG | + | chr4_4:73356963-73356982 | Msa0701920:intron | 35.0% |
| GGGACCAAAAACTACAAAAT+GGG | - | chr4_4:73357003-73357022 | None:intergenic | 35.0% | |
| AGGGACCAAAAACTACAAAA+TGG | - | chr4_4:73357004-73357023 | None:intergenic | 35.0% | |
| CAAAACAAGGCATATTTGCA+GGG | + | chr4_4:73357159-73357178 | Msa0701920:intron | 35.0% | |
| ! | GACTTATGGTTGTTACTTAG+TGG | + | chr4_4:73357321-73357340 | Msa0701920:intron | 35.0% |
| CCGTAATTTCTTGAAAGGAA+AGG | - | chr4_4:73357531-73357550 | None:intergenic | 35.0% | |
| !! | CTTGCTGTTACTTGTTAGTT+AGG | + | chr4_4:73357596-73357615 | Msa0701920:intron | 35.0% |
| !! | GTCTAGTTCTTAAGCTTCAA+AGG | + | chr4_4:73357641-73357660 | Msa0701920:intron | 35.0% |
| CTTCATGAACTTATCTTTGG+TGG | + | chr4_4:73357810-73357829 | Msa0701920:intron | 35.0% | |
| ! | TTTTCCATTTCAGCATCGTA+AGG | - | chr4_4:73357863-73357882 | None:intergenic | 35.0% |
| TTACGATGCTGAAATGGAAA+AGG | + | chr4_4:73357862-73357881 | Msa0701920:intron | 35.0% | |
| GCCACTGTCATAATGAAATT+TGG | + | chr4_4:73357981-73358000 | Msa0701920:intron | 35.0% | |
| ! | TTTGCTTTGTCTCCTGTTTT+TGG | + | chr4_4:73358219-73358238 | Msa0701920:CDS | 35.0% |
| TGCAATGCAAAACCAAAAAC+AGG | - | chr4_4:73358234-73358253 | None:intergenic | 35.0% | |
| GATGAACAAAAGGAATGTAG+AGG | + | chr4_4:73358266-73358285 | Msa0701920:CDS | 35.0% | |
| AACAAAAGGAATGTAGAGGA+TGG | + | chr4_4:73358270-73358289 | Msa0701920:CDS | 35.0% | |
| ATTCTGTGATAACAGACAAG+AGG | - | chr4_4:73358316-73358335 | None:intergenic | 35.0% | |
| GTTTACATGTGTGAAACCTA+AGG | + | chr4_4:73358377-73358396 | Msa0701920:CDS | 35.0% | |
| ! | TTGTTTGGGGCAAACAAACA+AGG | - | chr4_4:73356141-73356160 | None:intergenic | 40.0% |
| TGATTCCAGATTTGACGAAC+AGG | - | chr4_4:73356203-73356222 | None:intergenic | 40.0% | |
| !! | TTAGTCTTGGTGGCACTATT+CGG | + | chr4_4:73356242-73356261 | Msa0701920:intron | 40.0% |
| ! | TGTTTTCTCTGAGCCATTCT+GGG | - | chr4_4:73356653-73356672 | None:intergenic | 40.0% |
| ! | TTGTTTTCTCTGAGCCATTC+TGG | - | chr4_4:73356654-73356673 | None:intergenic | 40.0% |
| AACAATGTACTTCTTGGCTG+AGG | + | chr4_4:73356669-73356688 | Msa0701920:CDS | 40.0% | |
| CAAAACGAGGCATATTTGCA+GGG | - | chr4_4:73356867-73356886 | None:intergenic | 40.0% | |
| TAGGGACTAAAACCAAAACG+AGG | - | chr4_4:73356880-73356899 | None:intergenic | 40.0% | |
| TCATCACAAAAATGGGGTCA+GGG | - | chr4_4:73356953-73356972 | None:intergenic | 40.0% | |
| ATCATCACAAAAATGGGGTC+AGG | - | chr4_4:73356954-73356973 | None:intergenic | 40.0% | |
| CAGGGACTAAAACCAAAACA+AGG | + | chr4_4:73357146-73357165 | Msa0701920:intron | 40.0% | |
| !!! | CCTGCAAATATGCCTTGTTT+TGG | - | chr4_4:73357161-73357180 | None:intergenic | 40.0% |
| CCAAAACAAGGCATATTTGC+AGG | + | chr4_4:73357158-73357177 | Msa0701920:intron | 40.0% | |
| ! | AGTTTGAGGGGTTTGACTTA+TGG | + | chr4_4:73357307-73357326 | Msa0701920:intron | 40.0% |
| GGAACCCGTAATTTCTTGAA+AGG | - | chr4_4:73357536-73357555 | None:intergenic | 40.0% | |
| ! | ATGAACTTATCTTTGGTGGC+TGG | + | chr4_4:73357814-73357833 | Msa0701920:intron | 40.0% |
| TATGACAGTGGCAGATGAAT+TGG | - | chr4_4:73357973-73357992 | None:intergenic | 40.0% | |
| GAAGGAGAATGCAATGGTAA+AGG | + | chr4_4:73358096-73358115 | Msa0701920:CDS | 40.0% | |
| GAGAATGCAATGGTAAAGGA+GGG | + | chr4_4:73358100-73358119 | Msa0701920:CDS | 40.0% | |
| AAAGAATCCCATCTAGCACA+TGG | + | chr4_4:73358154-73358173 | Msa0701920:CDS | 40.0% | |
| AAAGAATGAACAGCACAACG+AGG | - | chr4_4:73358202-73358221 | None:intergenic | 40.0% | |
| AAAAGGAATGTAGAGGATGG+TGG | + | chr4_4:73358273-73358292 | Msa0701920:CDS | 40.0% | |
| GCAATCCTGTTCGTCAAATC+TGG | + | chr4_4:73356195-73356214 | Msa0701920:intron | 45.0% | |
| GAATAGTGCCACCAAGACTA+AGG | - | chr4_4:73356243-73356262 | None:intergenic | 45.0% | |
| CTGCATCAGCTAAATCCAGA+AGG | - | chr4_4:73356412-73356431 | None:intergenic | 45.0% | |
| GGATTTAGCTGATGCAGTTG+TGG | + | chr4_4:73356415-73356434 | Msa0701920:intron | 45.0% | |
| CCAAAACGAGGCATATTTGC+AGG | - | chr4_4:73356868-73356887 | None:intergenic | 45.0% | |
| ! | CCTGCAAATATGCCTCGTTT+TGG | + | chr4_4:73356865-73356884 | Msa0701920:intron | 45.0% |
| TCAAAGGGCGAGTAATATCC+AGG | + | chr4_4:73357657-73357676 | Msa0701920:intron | 45.0% | |
| GCATCCTTACGATGCTGAAA+TGG | + | chr4_4:73357856-73357875 | Msa0701920:intron | 45.0% | |
| AGGGTGACTTTATTGTCGTG+CGG | + | chr4_4:73357900-73357919 | Msa0701920:intron | 45.0% | |
| TGACTTTATTGTCGTGCGGA+AGG | + | chr4_4:73357904-73357923 | Msa0701920:intron | 45.0% | |
| TTACACAGGTGAGCCAAACA+GGG | + | chr4_4:73358067-73358086 | Msa0701920:intron | 45.0% | |
| TGGTCAGAAGGAGAATGCAA+TGG | + | chr4_4:73358090-73358109 | Msa0701920:CDS | 45.0% | |
| GGAGAATGCAATGGTAAAGG+AGG | + | chr4_4:73358099-73358118 | Msa0701920:CDS | 45.0% | |
| AATGCAATGGTAAAGGAGGG+TGG | + | chr4_4:73358103-73358122 | Msa0701920:CDS | 45.0% | |
| CATGGCTGGAGAAGTTTACT+AGG | + | chr4_4:73358172-73358191 | Msa0701920:CDS | 45.0% | |
| !! | GTAGAGGATGGTGGAATTGA+TGG | + | chr4_4:73358282-73358301 | Msa0701920:CDS | 45.0% |
| !! | GATGGTGGAATTGATGGAGA+TGG | + | chr4_4:73358288-73358307 | Msa0701920:CDS | 45.0% |
| !!! | AAAAACAAATTTTTTTTATA+GGG | - | chr4_4:73356898-73356917 | None:intergenic | 5.0% |
| !!! | AAATATTTTGTTTTTTAAAA+AGG | + | chr4_4:73357027-73357046 | Msa0701920:intron | 5.0% |
| !! | GTTGCTGTTTCACTGCCTTC+TGG | + | chr4_4:73356394-73356413 | Msa0701920:intron | 50.0% |
| TCTGGGAGATAACGACTGGA+GGG | - | chr4_4:73356636-73356655 | None:intergenic | 50.0% | |
| ! | TTCTGGGAGATAACGACTGG+AGG | - | chr4_4:73356637-73356656 | None:intergenic | 50.0% |
| ! | CCATTCTGGGAGATAACGAC+TGG | - | chr4_4:73356640-73356659 | None:intergenic | 50.0% |
| CCAGTCGTTATCTCCCAGAA+TGG | + | chr4_4:73356637-73356656 | Msa0701920:CDS | 50.0% | |
| !! | TGGTTCTGACGATGTGAGTG+AGG | + | chr4_4:73357756-73357775 | Msa0701920:intron | 50.0% |
| GTTACACAGGTGAGCCAAAC+AGG | + | chr4_4:73358066-73358085 | Msa0701920:intron | 50.0% | |
| AAAGGAGGGTGGTTTCCTTC+TGG | + | chr4_4:73358114-73358133 | Msa0701920:CDS | 50.0% | |
| ! | CTTCTGGCTGCGTGGAAAAA+CGG | + | chr4_4:73358130-73358149 | Msa0701920:CDS | 50.0% |
| AATCCCATCTAGCACATGGC+TGG | + | chr4_4:73358158-73358177 | Msa0701920:CDS | 50.0% | |
| TCTCCAGCCATGTGCTAGAT+GGG | - | chr4_4:73358164-73358183 | None:intergenic | 50.0% | |
| TTCTCCAGCCATGTGCTAGA+TGG | - | chr4_4:73358165-73358184 | None:intergenic | 50.0% | |
| CTGGGAGATAACGACTGGAG+GGG | - | chr4_4:73356635-73356654 | None:intergenic | 55.0% | |
| AGCCAAACAGGGTGGTCAGA+AGG | + | chr4_4:73358078-73358097 | Msa0701920:CDS | 55.0% | |
| CTCCTTCTGACCACCCTGTT+TGG | - | chr4_4:73358083-73358102 | None:intergenic | 55.0% | |
| ! | CGTTTTTCCACGCAGCCAGA+AGG | - | chr4_4:73358132-73358151 | None:intergenic | 55.0% |
| GTGGCTGGTACATCTCCTGC+AGG | + | chr4_4:73357829-73357848 | Msa0701920:intron | 60.0% | |
| CGTAAGGATGCGATGCCTGC+AGG | - | chr4_4:73357847-73357866 | None:intergenic | 60.0% | |
| CACAGGTGAGCCAAACAGGG+TGG | + | chr4_4:73358070-73358089 | Msa0701920:intron | 60.0% | |
| ! | GTGGTTTCCTTCTGGCTGCG+TGG | + | chr4_4:73358122-73358141 | Msa0701920:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 73355897 | 73358404 | 73355897 | ID=Msa0701920;Name=Msa0701920 |
| chr4_4 | mRNA | 73355897 | 73358404 | 73355897 | ID=Msa0701920-mRNA-1;Parent=Msa0701920;Name=Msa0701920-mRNA-1;_AED=0.98;_eAED=0.98;_QI=0|0|0|0.25|1|1|4|0|171 |
| chr4_4 | exon | 73355897 | 73355900 | 73355897 | ID=Msa0701920-mRNA-1:exon:22505;Parent=Msa0701920-mRNA-1 |
| chr4_4 | exon | 73356069 | 73356141 | 73356069 | ID=Msa0701920-mRNA-1:exon:22506;Parent=Msa0701920-mRNA-1 |
| chr4_4 | exon | 73356582 | 73356690 | 73356582 | ID=Msa0701920-mRNA-1:exon:22507;Parent=Msa0701920-mRNA-1 |
| chr4_4 | exon | 73358075 | 73358404 | 73358075 | ID=Msa0701920-mRNA-1:exon:22508;Parent=Msa0701920-mRNA-1 |
| chr4_4 | CDS | 73355897 | 73355900 | 73355897 | ID=Msa0701920-mRNA-1:cds;Parent=Msa0701920-mRNA-1 |
| chr4_4 | CDS | 73356069 | 73356141 | 73356069 | ID=Msa0701920-mRNA-1:cds;Parent=Msa0701920-mRNA-1 |
| chr4_4 | CDS | 73356582 | 73356690 | 73356582 | ID=Msa0701920-mRNA-1:cds;Parent=Msa0701920-mRNA-1 |
| chr4_4 | CDS | 73358075 | 73358404 | 73358075 | ID=Msa0701920-mRNA-1:cds;Parent=Msa0701920-mRNA-1 |
| Gene Sequence |
| Protein sequence |
