Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0145730 | XP_013466100.1 | 92.461 | 703 | 48 | 4 | 1 | 703 | 1 | 698 | 0.0 | 1222 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0145730 | sp|Q9LN50|PMTS_ARATH | 61.233 | 681 | 248 | 4 | 1 | 668 | 10 | 687 | 0.0 | 865 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0145730 | A0A072VPS8 | 92.461 | 703 | 48 | 4 | 1 | 703 | 1 | 698 | 0.0 | 1222 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003640 | Msa0145730 | 0.932182 | 1.249637e-94 | -8.615850e-47 |
| Msa0004980 | Msa0145730 | 0.800550 | 1.367576e-48 | -8.615850e-47 |
| Msa0006040 | Msa0145730 | 0.823271 | 1.515008e-53 | -8.615850e-47 |
| Msa0007440 | Msa0145730 | 0.801878 | 7.315709e-49 | -8.615850e-47 |
| Msa0011960 | Msa0145730 | 0.831351 | 1.753443e-55 | -8.615850e-47 |
| Msa0012080 | Msa0145730 | 0.802100 | 6.584212e-49 | -8.615850e-47 |
| Msa0013050 | Msa0145730 | -0.816473 | 5.429853e-52 | -8.615850e-47 |
| Msa0015930 | Msa0145730 | 0.819063 | 1.413681e-52 | -8.615850e-47 |
| Msa0023000 | Msa0145730 | 0.835007 | 2.155437e-56 | -8.615850e-47 |
| Msa0027260 | Msa0145730 | 0.822705 | 2.053703e-53 | -8.615850e-47 |
| Msa0028660 | Msa0145730 | 0.803216 | 3.876155e-49 | -8.615850e-47 |
| Msa0032090 | Msa0145730 | 0.810398 | 1.175645e-50 | -8.615850e-47 |
| Msa0032580 | Msa0145730 | 0.859184 | 4.929188e-63 | -8.615850e-47 |
| Msa0033110 | Msa0145730 | 0.846430 | 2.182530e-59 | -8.615850e-47 |
| Msa0033260 | Msa0145730 | 0.849639 | 2.842461e-60 | -8.615850e-47 |
| Msa0037540 | Msa0145730 | -0.835292 | 1.826466e-56 | -8.615850e-47 |
| Msa0037590 | Msa0145730 | -0.833489 | 5.179859e-56 | -8.615850e-47 |
| Msa0040690 | Msa0145730 | 0.820732 | 5.872505e-53 | -8.615850e-47 |
| Msa0043660 | Msa0145730 | 0.831581 | 1.538978e-55 | -8.615850e-47 |
| Msa0044000 | Msa0145730 | 0.800988 | 1.113012e-48 | -8.615850e-47 |
| Msa0047160 | Msa0145730 | 0.811072 | 8.405183e-51 | -8.615850e-47 |
| Msa0052640 | Msa0145730 | 0.811211 | 7.842693e-51 | -8.615850e-47 |
| Msa0052770 | Msa0145730 | 0.834616 | 2.704631e-56 | -8.615850e-47 |
| Msa0054750 | Msa0145730 | 0.834620 | 2.697166e-56 | -8.615850e-47 |
| Msa0055180 | Msa0145730 | 0.850947 | 1.220924e-60 | -8.615850e-47 |
| Msa0058300 | Msa0145730 | 0.952421 | 2.509931e-110 | -8.615850e-47 |
| Msa0059040 | Msa0145730 | 0.810784 | 9.704030e-51 | -8.615850e-47 |
| Msa0059110 | Msa0145730 | 0.809292 | 2.033647e-50 | -8.615850e-47 |
| Msa0074320 | Msa0145730 | 0.814682 | 1.360463e-51 | -8.615850e-47 |
| Msa0075500 | Msa0145730 | 0.802305 | 5.975101e-49 | -8.615850e-47 |
| Msa0075960 | Msa0145730 | 0.857559 | 1.503193e-62 | -8.615850e-47 |
| Msa0079180 | Msa0145730 | 0.800507 | 1.395097e-48 | -8.615850e-47 |
| Msa0080200 | Msa0145730 | 0.816244 | 6.110036e-52 | -8.615850e-47 |
| Msa0083310 | Msa0145730 | 0.827829 | 1.260490e-54 | -8.615850e-47 |
| Msa0091410 | Msa0145730 | 0.846818 | 1.710736e-59 | -8.615850e-47 |
| Msa0091570 | Msa0145730 | 0.833545 | 5.015701e-56 | -8.615850e-47 |
| Msa0094470 | Msa0145730 | 0.821338 | 4.256974e-53 | -8.615850e-47 |
| Msa0097780 | Msa0145730 | 0.819268 | 1.269884e-52 | -8.615850e-47 |
| Msa0099220 | Msa0145730 | 0.807816 | 4.200653e-50 | -8.615850e-47 |
| Msa0100740 | Msa0145730 | 0.853208 | 2.781456e-61 | -8.615850e-47 |
| Msa0105620 | Msa0145730 | 0.819369 | 1.204530e-52 | -8.615850e-47 |
| Msa0112770 | Msa0145730 | 0.805970 | 1.032151e-49 | -8.615850e-47 |
| Msa0115270 | Msa0145730 | 0.833315 | 5.722589e-56 | -8.615850e-47 |
| Msa0115390 | Msa0145730 | 0.826336 | 2.869449e-54 | -8.615850e-47 |
| Msa0118780 | Msa0145730 | 0.814677 | 1.363668e-51 | -8.615850e-47 |
| Msa0127050 | Msa0145730 | 0.803607 | 3.215536e-49 | -8.615850e-47 |
| Msa0127800 | Msa0145730 | 0.806360 | 8.544800e-50 | -8.615850e-47 |
| Msa0128860 | Msa0145730 | 0.808593 | 2.869492e-50 | -8.615850e-47 |
| Msa0129190 | Msa0145730 | -0.844435 | 7.575625e-59 | -8.615850e-47 |
| Msa0136070 | Msa0145730 | 0.816767 | 4.666763e-52 | -8.615850e-47 |
| Msa0136100 | Msa0145730 | 0.806265 | 8.945188e-50 | -8.615850e-47 |
| Msa0137550 | Msa0145730 | 0.822273 | 2.587767e-53 | -8.615850e-47 |
| Msa0138630 | Msa0145730 | 0.939287 | 1.638870e-99 | -8.615850e-47 |
| Msa0145730 | Msa0150820 | 0.828404 | 9.161774e-55 | -8.615850e-47 |
| Msa0145730 | Msa0156370 | 0.817364 | 3.425683e-52 | -8.615850e-47 |
| Msa0145730 | Msa0159170 | 0.823081 | 1.677889e-53 | -8.615850e-47 |
| Msa0145730 | Msa0159340 | 0.862228 | 5.878317e-64 | -8.615850e-47 |
| Msa0145730 | Msa0160550 | 0.826920 | 2.081805e-54 | -8.615850e-47 |
| Msa0145730 | Msa0162130 | 0.835842 | 1.326124e-56 | -8.615850e-47 |
| Msa0145730 | Msa0165660 | 0.842570 | 2.385058e-58 | -8.615850e-47 |
| Msa0145730 | Msa0168230 | 0.805357 | 1.388336e-49 | -8.615850e-47 |
| Msa0145730 | Msa0172070 | 0.800983 | 1.115783e-48 | -8.615850e-47 |
| Msa0145730 | Msa0172970 | 0.863085 | 3.201670e-64 | -8.615850e-47 |
| Msa0145730 | Msa0174730 | 0.808585 | 2.881427e-50 | -8.615850e-47 |
| Msa0145730 | Msa0187120 | 0.811134 | 8.151038e-51 | -8.615850e-47 |
| Msa0145730 | Msa0187690 | 0.814446 | 1.534476e-51 | -8.615850e-47 |
| Msa0145730 | Msa0189300 | 0.804561 | 2.036142e-49 | -8.615850e-47 |
| Msa0145730 | Msa0189520 | 0.809303 | 2.022215e-50 | -8.615850e-47 |
| Msa0145730 | Msa0193120 | 0.802401 | 5.708331e-49 | -8.615850e-47 |
| Msa0145730 | Msa0199880 | 0.801147 | 1.032628e-48 | -8.615850e-47 |
| Msa0145730 | Msa0208220 | 0.818801 | 1.621916e-52 | -8.615850e-47 |
| Msa0145730 | Msa0208350 | 0.832555 | 8.840739e-56 | -8.615850e-47 |
| Msa0145730 | Msa0220720 | 0.839521 | 1.507732e-57 | -8.615850e-47 |
| Msa0145730 | Msa0231660 | 0.809497 | 1.838109e-50 | -8.615850e-47 |
| Msa0145730 | Msa0236270 | 0.802437 | 5.613291e-49 | -8.615850e-47 |
| Msa0145730 | Msa0241390 | 0.803875 | 2.829327e-49 | -8.615850e-47 |
| Msa0145730 | Msa0241620 | 0.810395 | 1.177592e-50 | -8.615850e-47 |
| Msa0145730 | Msa0256330 | 0.807179 | 5.734450e-50 | -8.615850e-47 |
| Msa0145730 | Msa0262050 | 0.808226 | 3.436203e-50 | -8.615850e-47 |
| Msa0145730 | Msa0262310 | 0.832112 | 1.138426e-55 | -8.615850e-47 |
| Msa0145730 | Msa0265430 | 0.849760 | 2.629398e-60 | -8.615850e-47 |
| Msa0145730 | Msa0279220 | 0.824565 | 7.534735e-54 | -8.615850e-47 |
| Msa0145730 | Msa0279240 | 0.830279 | 3.212294e-55 | -8.615850e-47 |
| Msa0145730 | Msa0279700 | 0.828765 | 7.492769e-55 | -8.615850e-47 |
| Msa0145730 | Msa0295330 | 0.802858 | 4.595541e-49 | -8.615850e-47 |
| Msa0145730 | Msa0295540 | 0.805192 | 1.502715e-49 | -8.615850e-47 |
| Msa0145730 | Msa0298700 | 0.806585 | 7.659437e-50 | -8.615850e-47 |
| Msa0145730 | Msa0299870 | 0.848772 | 4.952643e-60 | -8.615850e-47 |
| Msa0145730 | Msa0306710 | 0.828122 | 1.071631e-54 | -8.615850e-47 |
| Msa0145730 | Msa0309750 | 0.810555 | 1.087548e-50 | -8.615850e-47 |
| Msa0145730 | Msa0309770 | 0.817145 | 3.838694e-52 | -8.615850e-47 |
| Msa0145730 | Msa0318980 | 0.835619 | 1.510362e-56 | -8.615850e-47 |
| Msa0145730 | Msa0337240 | 0.859865 | 3.076742e-63 | -8.615850e-47 |
| Msa0145730 | Msa0337650 | 0.825835 | 3.774395e-54 | -8.615850e-47 |
| Msa0145730 | Msa0340380 | 0.859288 | 4.588882e-63 | -8.615850e-47 |
| Msa0145730 | Msa0345350 | 0.823237 | 1.543148e-53 | -8.615850e-47 |
| Msa0145730 | Msa0345390 | 0.803890 | 2.808910e-49 | -8.615850e-47 |
| Msa0145730 | Msa0357900 | 0.804618 | 1.981119e-49 | -8.615850e-47 |
| Msa0145730 | Msa0358170 | 0.808111 | 3.636864e-50 | -8.615850e-47 |
| Msa0145730 | Msa0366890 | 0.831537 | 1.578536e-55 | -8.615850e-47 |
| Msa0145730 | Msa0369220 | 0.843064 | 1.763218e-58 | -8.615850e-47 |
| Msa0145730 | Msa0372340 | 0.832299 | 1.023430e-55 | -8.615850e-47 |
| Msa0145730 | Msa0383800 | 0.815907 | 7.268573e-52 | -8.615850e-47 |
| Msa0145730 | Msa0385580 | 0.827257 | 1.728783e-54 | -8.615850e-47 |
| Msa0145730 | Msa0388050 | 0.839183 | 1.845631e-57 | -8.615850e-47 |
| Msa0145730 | Msa0388700 | 0.802779 | 4.770748e-49 | -8.615850e-47 |
| Msa0145730 | Msa0397540 | 0.832989 | 6.901073e-56 | -8.615850e-47 |
| Msa0145730 | Msa0398950 | 0.815039 | 1.133676e-51 | -8.615850e-47 |
| Msa0145730 | Msa0402790 | 0.825177 | 5.403826e-54 | -8.615850e-47 |
| Msa0145730 | Msa0414800 | 0.812150 | 4.899007e-51 | -8.615850e-47 |
| Msa0145730 | Msa0442190 | 0.807742 | 4.356838e-50 | -8.615850e-47 |
| Msa0145730 | Msa0458060 | 0.822251 | 2.617564e-53 | -8.615850e-47 |
| Msa0145730 | Msa0469620 | -0.802287 | 6.026792e-49 | -8.615850e-47 |
| Msa0145730 | Msa0493410 | 0.809046 | 2.295793e-50 | -8.615850e-47 |
| Msa0145730 | Msa0504020 | 0.811863 | 5.658213e-51 | -8.615850e-47 |
| Msa0145730 | Msa0508590 | 0.817193 | 3.744747e-52 | -8.615850e-47 |
| Msa0145730 | Msa0508870 | 0.825120 | 5.573085e-54 | -8.615850e-47 |
| Msa0145730 | Msa0510350 | 0.860093 | 2.626464e-63 | -8.615850e-47 |
| Msa0145730 | Msa0512750 | 0.807191 | 5.703422e-50 | -8.615850e-47 |
| Msa0145730 | Msa0526540 | 0.809593 | 1.752547e-50 | -8.615850e-47 |
| Msa0145730 | Msa0534900 | 0.844764 | 6.177668e-59 | -8.615850e-47 |
| Msa0145730 | Msa0541360 | 0.831393 | 1.712662e-55 | -8.615850e-47 |
| Msa0145730 | Msa0541410 | 0.800964 | 1.125596e-48 | -8.615850e-47 |
| Msa0145730 | Msa0542090 | 0.824579 | 7.478978e-54 | -8.615850e-47 |
| Msa0145730 | Msa0542130 | 0.826529 | 2.580673e-54 | -8.615850e-47 |
| Msa0145730 | Msa0545080 | 0.834233 | 3.374996e-56 | -8.615850e-47 |
| Msa0145730 | Msa0576940 | 0.816123 | 6.504827e-52 | -8.615850e-47 |
| Msa0145730 | Msa0581280 | 0.800778 | 1.228599e-48 | -8.615850e-47 |
| Msa0145730 | Msa0608320 | 0.802344 | 5.867003e-49 | -8.615850e-47 |
| Msa0145730 | Msa0608500 | 0.805437 | 1.335654e-49 | -8.615850e-47 |
| Msa0145730 | Msa0610430 | 0.834895 | 2.300880e-56 | -8.615850e-47 |
| Msa0145730 | Msa0615440 | 0.803924 | 2.763249e-49 | -8.615850e-47 |
| Msa0145730 | Msa0615490 | 0.803041 | 4.212749e-49 | -8.615850e-47 |
| Msa0145730 | Msa0616240 | 0.840133 | 1.044632e-57 | -8.615850e-47 |
| Msa0145730 | Msa0620890 | 0.849437 | 3.236507e-60 | -8.615850e-47 |
| Msa0145730 | Msa0621490 | 0.813762 | 2.171585e-51 | -8.615850e-47 |
| Msa0145730 | Msa0623790 | 0.839924 | 1.184335e-57 | -8.615850e-47 |
| Msa0145730 | Msa0631350 | 0.824506 | 7.779351e-54 | -8.615850e-47 |
| Msa0145730 | Msa0632870 | 0.808812 | 2.576362e-50 | -8.615850e-47 |
| Msa0145730 | Msa0636070 | 0.826042 | 3.370636e-54 | -8.615850e-47 |
| Msa0145730 | Msa0641670 | 0.823237 | 1.543314e-53 | -8.615850e-47 |
| Msa0145730 | Msa0643560 | 0.849974 | 2.290323e-60 | -8.615850e-47 |
| Msa0145730 | Msa0643570 | 0.807343 | 5.293893e-50 | -8.615850e-47 |
| Msa0145730 | Msa0660490 | 0.833464 | 5.254721e-56 | -8.615850e-47 |
| Msa0145730 | Msa0661210 | 0.830180 | 3.395229e-55 | -8.615850e-47 |
| Msa0145730 | Msa0663920 | 0.802567 | 5.278103e-49 | -8.615850e-47 |
| Msa0145730 | Msa0675410 | 0.826282 | 2.955781e-54 | -8.615850e-47 |
| Msa0145730 | Msa0677290 | 0.812743 | 3.636040e-51 | -8.615850e-47 |
| Msa0145730 | Msa0685140 | 0.813934 | 1.990568e-51 | -8.615850e-47 |
| Msa0145730 | Msa0688960 | 0.830120 | 3.511425e-55 | -8.615850e-47 |
| Msa0145730 | Msa0689260 | 0.800318 | 1.524796e-48 | -8.615850e-47 |
| Msa0145730 | Msa0691900 | 0.811924 | 5.487627e-51 | -8.615850e-47 |
| Msa0145730 | Msa0692830 | 0.835287 | 1.831611e-56 | -8.615850e-47 |
| Msa0145730 | Msa0692950 | 0.840789 | 7.035696e-58 | -8.615850e-47 |
| Msa0145730 | Msa0698490 | 0.807874 | 4.084268e-50 | -8.615850e-47 |
| Msa0145730 | Msa0698540 | 0.805987 | 1.023566e-49 | -8.615850e-47 |
| Msa0145730 | Msa0698660 | 0.808388 | 3.173511e-50 | -8.615850e-47 |
| Msa0145730 | Msa0699570 | 0.841871 | 3.652980e-58 | -8.615850e-47 |
| Msa0145730 | Msa0715700 | 0.822836 | 1.914379e-53 | -8.615850e-47 |
| Msa0145730 | Msa0716840 | 0.835381 | 1.734133e-56 | -8.615850e-47 |
| Msa0145730 | Msa0717230 | -0.820099 | 8.200856e-53 | -8.615850e-47 |
| Msa0145730 | Msa0719420 | 0.827073 | 1.912982e-54 | -8.615850e-47 |
| Msa0145730 | Msa0733890 | 0.813994 | 1.930779e-51 | -8.615850e-47 |
| Msa0145730 | Msa0737600 | 0.803458 | 3.453546e-49 | -8.615850e-47 |
| Msa0145730 | Msa0772480 | 0.804276 | 2.334813e-49 | -8.615850e-47 |
| Msa0145730 | Msa0784860 | 0.856735 | 2.632051e-62 | -8.615850e-47 |
| Msa0145730 | Msa0789680 | 0.828400 | 9.184146e-55 | -8.615850e-47 |
| Msa0145730 | Msa0790660 | -0.800641 | 1.309962e-48 | -8.615850e-47 |
| Msa0145730 | Msa0793380 | 0.803961 | 2.715627e-49 | -8.615850e-47 |
| Msa0145730 | Msa0793800 | 0.809981 | 1.446396e-50 | -8.615850e-47 |
| Msa0145730 | Msa0798440 | 0.817723 | 2.844344e-52 | -8.615850e-47 |
| Msa0145730 | Msa0799680 | -0.816966 | 4.210827e-52 | -8.615850e-47 |
| Msa0145730 | Msa0802410 | 0.827741 | 1.323216e-54 | -8.615850e-47 |
| Msa0145730 | Msa0808080 | 0.811241 | 7.723431e-51 | -8.615850e-47 |
| Msa0145730 | Msa0808270 | 0.807407 | 5.130912e-50 | -8.615850e-47 |
| Msa0145730 | Msa0812570 | 0.824576 | 7.490766e-54 | -8.615850e-47 |
| Msa0145730 | Msa0813720 | 0.820739 | 5.849986e-53 | -8.615850e-47 |
| Msa0145730 | Msa0813740 | 0.808840 | 2.541658e-50 | -8.615850e-47 |
| Msa0145730 | Msa0816730 | 0.811989 | 5.311945e-51 | -8.615850e-47 |
| Msa0145730 | Msa0817730 | 0.815968 | 7.043349e-52 | -8.615850e-47 |
| Msa0145730 | Msa0831530 | 0.802649 | 5.076368e-49 | -8.615850e-47 |
| Msa0145730 | Msa0849030 | 0.822714 | 2.043434e-53 | -8.615850e-47 |
| Msa0145730 | Msa0858180 | 0.816895 | 4.368648e-52 | -8.615850e-47 |
| Msa0145730 | Msa0870150 | 0.827754 | 1.313869e-54 | -8.615850e-47 |
| Msa0145730 | Msa0887250 | 0.810804 | 9.607669e-51 | -8.615850e-47 |
| Msa0145730 | Msa0927260 | 0.812024 | 5.219630e-51 | -8.615850e-47 |
| Msa0145730 | Msa0945440 | 0.806805 | 6.881098e-50 | -8.615850e-47 |
| Msa0145730 | Msa0987370 | 0.818450 | 1.947731e-52 | -8.615850e-47 |
| Msa0145730 | Msa0989540 | 0.821249 | 4.462950e-53 | -8.615850e-47 |
| Msa0145730 | Msa0999970 | 0.818524 | 1.873748e-52 | -8.615850e-47 |
| Msa0145730 | Msa1009820 | 0.844337 | 8.046047e-59 | -8.615850e-47 |
| Msa0145730 | Msa1011680 | 0.815921 | 7.215462e-52 | -8.615850e-47 |
| Msa0145730 | Msa1012830 | 0.814055 | 1.871891e-51 | -8.615850e-47 |
| Msa0145730 | Msa1019260 | 0.802135 | 6.476151e-49 | -8.615850e-47 |
| Msa0145730 | Msa1030620 | 0.851943 | 6.383768e-61 | -8.615850e-47 |
| Msa0145730 | Msa1037420 | 0.861729 | 8.361038e-64 | -8.615850e-47 |
| Msa0145730 | Msa1039140 | 0.800033 | 1.742266e-48 | -8.615850e-47 |
| Msa0145730 | Msa1046020 | 0.804963 | 1.678667e-49 | -8.615850e-47 |
| Msa0145730 | Msa1046060 | 0.810928 | 9.031091e-51 | -8.615850e-47 |
| Msa0145730 | Msa1051200 | 0.864543 | 1.127753e-64 | -8.615850e-47 |
| Msa0145730 | Msa1077030 | 0.817044 | 4.043616e-52 | -8.615850e-47 |
| Msa0145730 | Msa1080290 | 0.834768 | 2.475635e-56 | -8.615850e-47 |
| Msa0145730 | Msa1084470 | 0.836732 | 7.875046e-57 | -8.615850e-47 |
| Msa0145730 | Msa1087710 | 0.813199 | 2.887722e-51 | -8.615850e-47 |
| Msa0145730 | Msa1104140 | 0.826712 | 2.334350e-54 | -8.615850e-47 |
| Msa0145730 | Msa1104210 | 0.820438 | 6.858225e-53 | -8.615850e-47 |
| Msa0145730 | Msa1106700 | 0.808361 | 3.215995e-50 | -8.615850e-47 |
| Msa0145730 | Msa1108820 | 0.800911 | 1.154234e-48 | -8.615850e-47 |
| Msa0145730 | Msa1115080 | 0.802687 | 4.983384e-49 | -8.615850e-47 |
| Msa0145730 | Msa1123810 | 0.845166 | 4.809858e-59 | -8.615850e-47 |
| Msa0145730 | Msa1133230 | 0.801455 | 8.931811e-49 | -8.615850e-47 |
| Msa0145730 | Msa1133250 | 0.811410 | 7.100333e-51 | -8.615850e-47 |
| Msa0145730 | Msa1136540 | 0.830854 | 2.322181e-55 | -8.615850e-47 |
| Msa0145730 | Msa1137700 | 0.852046 | 5.967357e-61 | -8.615850e-47 |
| Msa0145730 | Msa1160590 | 0.803793 | 2.942269e-49 | -8.615850e-47 |
| Msa0145730 | Msa1162270 | 0.803998 | 2.667000e-49 | -8.615850e-47 |
| Msa0145730 | Msa1173140 | 0.834969 | 2.204250e-56 | -8.615850e-47 |
| Msa0145730 | Msa1176710 | 0.806466 | 8.115021e-50 | -8.615850e-47 |
| Msa0145730 | Msa1180500 | 0.828929 | 6.840595e-55 | -8.615850e-47 |
| Msa0145730 | Msa1181250 | 0.830764 | 2.444012e-55 | -8.615850e-47 |
| Msa0145730 | Msa1181330 | 0.817240 | 3.654405e-52 | -8.615850e-47 |
| Msa0145730 | Msa1181850 | 0.801257 | 9.807553e-49 | -8.615850e-47 |
| Msa0145730 | Msa1204890 | 0.812340 | 4.453498e-51 | -8.615850e-47 |
| Msa0145730 | Msa1206670 | 0.801965 | 7.018972e-49 | -8.615850e-47 |
| Msa0145730 | Msa1206850 | 0.801752 | 7.764533e-49 | -8.615850e-47 |
| Msa0145730 | Msa1208880 | 0.812797 | 3.537484e-51 | -8.615850e-47 |
| Msa0145730 | Msa1209200 | 0.813644 | 2.306573e-51 | -8.615850e-47 |
| Msa0145730 | Msa1209260 | 0.806687 | 7.289865e-50 | -8.615850e-47 |
| Msa0145730 | Msa1217470 | 0.802353 | 5.840781e-49 | -8.615850e-47 |
| Msa0145730 | Msa1224810 | 0.848653 | 5.345320e-60 | -8.615850e-47 |
| Msa0145730 | Msa1225700 | 0.802136 | 6.472289e-49 | -8.615850e-47 |
| Msa0145730 | Msa1231840 | 0.844975 | 5.418069e-59 | -8.615850e-47 |
| Msa0145730 | Msa1237940 | 0.805369 | 1.380272e-49 | -8.615850e-47 |
| Msa0145730 | Msa1245930 | 0.806199 | 9.238184e-50 | -8.615850e-47 |
| Msa0145730 | Msa1254730 | 0.810307 | 1.230323e-50 | -8.615850e-47 |
| Msa0145730 | Msa1259060 | 0.810697 | 1.013324e-50 | -8.615850e-47 |
| Msa0145730 | Msa1260130 | 0.801923 | 7.160489e-49 | -8.615850e-47 |
| Msa0145730 | Msa1265630 | 0.810079 | 1.377465e-50 | -8.615850e-47 |
| Msa0145730 | Msa1274560 | 0.841266 | 5.272166e-58 | -8.615850e-47 |
| Msa0145730 | Msa1275360 | 0.806871 | 6.665156e-50 | -8.615850e-47 |
| Msa0145730 | Msa1302100 | 0.800138 | 1.658523e-48 | -8.615850e-47 |
| Msa0145730 | Msa1302850 | 0.825359 | 4.893651e-54 | -8.615850e-47 |
| Msa0145730 | Msa1306560 | 0.805936 | 1.049481e-49 | -8.615850e-47 |
| Msa0145730 | Msa1307600 | 0.810068 | 1.385026e-50 | -8.615850e-47 |
| Msa0145730 | Msa1312520 | 0.834717 | 2.550813e-56 | -8.615850e-47 |
| Msa0145730 | Msa1332040 | -0.802606 | 5.179600e-49 | -8.615850e-47 |
| Msa0145730 | Msa1332590 | 0.800186 | 1.621790e-48 | -8.615850e-47 |
| Msa0145730 | Msa1340470 | 0.823612 | 1.261151e-53 | -8.615850e-47 |
| Msa0145730 | Msa1344340 | 0.803083 | 4.128960e-49 | -8.615850e-47 |
| Msa0145730 | Msa1358250 | 0.800356 | 1.498025e-48 | -8.615850e-47 |
| Msa0145730 | Msa1359630 | 0.841953 | 3.475508e-58 | -8.615850e-47 |
| Msa0145730 | Msa1361520 | 0.811935 | 5.458035e-51 | -8.615850e-47 |
| Msa0145730 | Msa1363330 | 0.811050 | 8.497236e-51 | -8.615850e-47 |
| Msa0145730 | Msa1374120 | 0.813740 | 2.195992e-51 | -8.615850e-47 |
| Msa0145730 | Msa1379760 | 0.813701 | 2.239893e-51 | -8.615850e-47 |
| Msa0145730 | Msa1385100 | 0.826475 | 2.658617e-54 | -8.615850e-47 |
| Msa0145730 | Msa1385770 | 0.847411 | 1.176504e-59 | -8.615850e-47 |
| Msa0145730 | Msa1386600 | 0.810805 | 9.604085e-51 | -8.615850e-47 |
| Msa0145730 | Msa1386780 | 0.801349 | 9.391583e-49 | -8.615850e-47 |
| Msa0145730 | Msa1389800 | 0.817865 | 2.641502e-52 | -8.615850e-47 |
| Msa0145730 | Msa1390180 | 0.828641 | 8.029553e-55 | -8.615850e-47 |
| Msa0145730 | Msa1392780 | 0.806437 | 8.229512e-50 | -8.615850e-47 |
| Msa0145730 | Msa1394290 | 0.824382 | 8.322295e-54 | -8.615850e-47 |
| Msa0145730 | Msa1400580 | 0.824214 | 9.112914e-54 | -8.615850e-47 |
| Msa0145730 | Msa1403420 | 0.803496 | 3.390938e-49 | -8.615850e-47 |
| Msa0145730 | Msa1409240 | 0.846305 | 2.361157e-59 | -8.615850e-47 |
| Msa0145730 | Msa1432420 | 0.810919 | 9.069719e-51 | -8.615850e-47 |
| Msa0145730 | Msa1434140 | 0.853786 | 1.897868e-61 | -8.615850e-47 |
| Msa0145730 | Msa1444310 | 0.813059 | 3.099428e-51 | -8.615850e-47 |
| Msa0145730 | Msa1454480 | 0.820947 | 5.238747e-53 | -8.615850e-47 |
| Msa0145730 | Msa1457920 | 0.816842 | 4.488495e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0145730 | MtrunA17_Chr1g0155141 | 92.461 | 703 | 48 | 4 | 1 | 703 | 1 | 698 | 0.0 | 1222 |
| Msa0145730 | MtrunA17_Chr8g0384431 | 43.192 | 639 | 323 | 9 | 58 | 669 | 147 | 772 | 0.0 | 554 |
| Msa0145730 | MtrunA17_Chr3g0130381 | 50.000 | 492 | 224 | 5 | 197 | 668 | 252 | 741 | 0.0 | 539 |
| Msa0145730 | MtrunA17_Chr3g0125511 | 41.135 | 705 | 357 | 14 | 13 | 681 | 34 | 716 | 2.13e-177 | 525 |
| Msa0145730 | MtrunA17_Chr8g0372471 | 46.488 | 484 | 240 | 7 | 200 | 667 | 374 | 854 | 1.23e-161 | 489 |
| Msa0145730 | MtrunA17_Chr5g0437501 | 41.788 | 548 | 292 | 9 | 172 | 695 | 60 | 604 | 6.42e-150 | 450 |
| Msa0145730 | MtrunA17_Chr3g0113981 | 42.639 | 523 | 271 | 10 | 195 | 695 | 152 | 667 | 5.16e-143 | 434 |
| Msa0145730 | MtrunA17_Chr1g0159741 | 42.449 | 490 | 246 | 13 | 203 | 667 | 141 | 619 | 1.08e-115 | 363 |
| Msa0145730 | MtrunA17_Chr3g0112341 | 40.408 | 490 | 255 | 14 | 202 | 667 | 152 | 628 | 3.02e-114 | 359 |
| Msa0145730 | MtrunA17_Chr5g0435751 | 39.796 | 490 | 238 | 15 | 202 | 667 | 124 | 580 | 6.51e-104 | 331 |
| Msa0145730 | MtrunA17_Chr1g0167381 | 35.949 | 548 | 297 | 15 | 162 | 666 | 35 | 571 | 7.92e-100 | 320 |
| Msa0145730 | MtrunA17_Chr1g0183721 | 38.809 | 487 | 264 | 12 | 205 | 666 | 64 | 541 | 8.60e-100 | 319 |
| Msa0145730 | MtrunA17_Chr8g0369481 | 37.267 | 483 | 261 | 13 | 212 | 665 | 78 | 547 | 2.15e-99 | 318 |
| Msa0145730 | MtrunA17_Chr5g0409411 | 36.232 | 483 | 266 | 13 | 212 | 665 | 80 | 549 | 2.92e-98 | 315 |
| Msa0145730 | MtrunA17_Chr6g0472571 | 37.778 | 495 | 258 | 16 | 208 | 668 | 109 | 587 | 2.25e-96 | 311 |
| Msa0145730 | MtrunA17_Chr1g0187601 | 36.008 | 486 | 279 | 10 | 205 | 666 | 93 | 570 | 1.50e-94 | 306 |
| Msa0145730 | MtrunA17_Chr1g0203741 | 38.493 | 491 | 252 | 16 | 214 | 668 | 102 | 578 | 7.05e-93 | 302 |
| Msa0145730 | MtrunA17_Chr8g0350391 | 36.089 | 496 | 265 | 16 | 210 | 668 | 111 | 591 | 3.00e-90 | 295 |
| Msa0145730 | MtrunA17_Chr8g0388881 | 35.656 | 488 | 267 | 15 | 214 | 668 | 108 | 581 | 5.06e-90 | 294 |
| Msa0145730 | MtrunA17_Chr7g0214551 | 35.758 | 495 | 275 | 15 | 203 | 665 | 43 | 526 | 3.36e-89 | 290 |
| Msa0145730 | MtrunA17_Chr5g0404761 | 50.622 | 241 | 104 | 4 | 437 | 666 | 1 | 237 | 1.75e-88 | 279 |
| Msa0145730 | MtrunA17_Chr4g0055031 | 35.556 | 495 | 274 | 15 | 203 | 668 | 86 | 564 | 7.03e-86 | 283 |
| Msa0145730 | MtrunA17_Chr8g0350351 | 35.808 | 458 | 261 | 11 | 231 | 668 | 117 | 561 | 1.14e-85 | 282 |
| Msa0145730 | MtrunA17_Chr7g0246701 | 35.174 | 489 | 270 | 15 | 214 | 668 | 111 | 586 | 1.97e-84 | 280 |
| Msa0145730 | MtrunA17_Chr8g0361791 | 33.463 | 514 | 291 | 15 | 196 | 675 | 76 | 572 | 4.97e-83 | 275 |
| Msa0145730 | MtrunA17_Chr7g0246681 | 35.498 | 462 | 264 | 12 | 231 | 673 | 104 | 550 | 3.56e-82 | 272 |
| Msa0145730 | MtrunA17_Chr3g0092501 | 35.124 | 484 | 265 | 16 | 213 | 667 | 94 | 557 | 1.16e-80 | 269 |
| Msa0145730 | MtrunA17_Chr1g0171781 | 33.753 | 477 | 282 | 11 | 214 | 666 | 96 | 562 | 2.52e-80 | 268 |
| Msa0145730 | MtrunA17_Chr5g0416991 | 33.333 | 495 | 283 | 14 | 203 | 668 | 84 | 560 | 3.13e-78 | 262 |
| Msa0145730 | MtrunA17_Chr5g0426281 | 31.827 | 531 | 282 | 18 | 202 | 678 | 142 | 646 | 1.12e-74 | 254 |
| Msa0145730 | MtrunA17_Chr5g0404771 | 35.062 | 405 | 239 | 7 | 38 | 425 | 147 | 544 | 1.40e-70 | 241 |
| Msa0145730 | MtrunA17_Chr3g0115931 | 32.136 | 501 | 281 | 19 | 213 | 667 | 163 | 650 | 3.89e-69 | 240 |
| Msa0145730 | MtrunA17_Chr4g0043131 | 62.037 | 108 | 37 | 3 | 563 | 667 | 39 | 145 | 8.77e-35 | 130 |
| Msa0145730 | MtrunA17_Chr4g0043121 | 26.433 | 314 | 203 | 10 | 209 | 502 | 91 | 396 | 5.30e-34 | 135 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0145730 | AT1G19430.1 | 61.233 | 681 | 248 | 4 | 1 | 668 | 10 | 687 | 0.0 | 865 |
| Msa0145730 | AT1G19430.3 | 61.233 | 681 | 248 | 4 | 1 | 668 | 10 | 687 | 0.0 | 865 |
| Msa0145730 | AT1G19430.2 | 58.673 | 588 | 227 | 4 | 1 | 575 | 10 | 594 | 0.0 | 702 |
| Msa0145730 | AT2G34300.2 | 39.580 | 715 | 377 | 8 | 8 | 669 | 11 | 723 | 0.0 | 538 |
| Msa0145730 | AT2G34300.3 | 39.580 | 715 | 377 | 8 | 8 | 669 | 11 | 723 | 0.0 | 538 |
| Msa0145730 | AT2G34300.1 | 39.580 | 715 | 377 | 8 | 8 | 669 | 11 | 723 | 0.0 | 538 |
| Msa0145730 | AT5G64030.1 | 48.800 | 500 | 234 | 5 | 199 | 678 | 294 | 791 | 1.05e-180 | 537 |
| Msa0145730 | AT1G29470.1 | 40.463 | 734 | 360 | 15 | 8 | 679 | 11 | 729 | 1.80e-180 | 534 |
| Msa0145730 | AT1G29470.2 | 40.463 | 734 | 360 | 15 | 8 | 679 | 11 | 729 | 1.80e-180 | 534 |
| Msa0145730 | AT3G51070.1 | 47.314 | 484 | 233 | 6 | 203 | 666 | 371 | 852 | 7.00e-172 | 516 |
| Msa0145730 | AT3G51070.2 | 47.072 | 461 | 223 | 5 | 203 | 643 | 371 | 830 | 3.34e-163 | 492 |
| Msa0145730 | AT2G40280.1 | 44.706 | 510 | 258 | 11 | 202 | 695 | 79 | 580 | 7.50e-147 | 441 |
| Msa0145730 | AT3G56080.1 | 43.867 | 481 | 245 | 10 | 203 | 668 | 107 | 577 | 7.86e-139 | 421 |
| Msa0145730 | AT3G56080.2 | 43.267 | 453 | 233 | 9 | 203 | 640 | 107 | 550 | 8.57e-129 | 394 |
| Msa0145730 | AT5G06050.1 | 39.416 | 548 | 294 | 18 | 143 | 667 | 92 | 624 | 8.42e-120 | 374 |
| Msa0145730 | AT2G39750.1 | 40.937 | 491 | 253 | 14 | 202 | 668 | 176 | 653 | 4.92e-116 | 365 |
| Msa0145730 | AT1G77260.1 | 39.545 | 483 | 263 | 13 | 204 | 667 | 144 | 616 | 5.24e-111 | 351 |
| Msa0145730 | AT4G19120.1 | 37.474 | 483 | 262 | 12 | 212 | 665 | 78 | 549 | 1.32e-100 | 322 |
| Msa0145730 | AT4G19120.2 | 37.474 | 483 | 262 | 12 | 212 | 665 | 78 | 549 | 1.32e-100 | 322 |
| Msa0145730 | AT1G31850.1 | 35.404 | 483 | 272 | 11 | 212 | 665 | 84 | 555 | 1.34e-98 | 317 |
| Msa0145730 | AT1G31850.2 | 35.404 | 483 | 272 | 11 | 212 | 665 | 84 | 555 | 1.34e-98 | 317 |
| Msa0145730 | AT1G31850.4 | 35.404 | 483 | 272 | 11 | 212 | 665 | 84 | 555 | 1.34e-98 | 317 |
| Msa0145730 | AT1G31850.3 | 35.404 | 483 | 272 | 11 | 212 | 665 | 84 | 555 | 1.34e-98 | 317 |
| Msa0145730 | AT4G14360.1 | 36.831 | 486 | 275 | 11 | 205 | 666 | 78 | 555 | 6.44e-97 | 312 |
| Msa0145730 | AT4G14360.2 | 36.831 | 486 | 275 | 11 | 205 | 666 | 78 | 555 | 6.44e-97 | 312 |
| Msa0145730 | AT3G23300.2 | 36.420 | 486 | 277 | 11 | 205 | 666 | 81 | 558 | 1.14e-94 | 306 |
| Msa0145730 | AT3G23300.1 | 36.420 | 486 | 277 | 11 | 205 | 666 | 81 | 558 | 1.14e-94 | 306 |
| Msa0145730 | AT1G04430.1 | 36.653 | 502 | 278 | 14 | 205 | 680 | 86 | 573 | 1.88e-94 | 306 |
| Msa0145730 | AT1G04430.3 | 36.653 | 502 | 278 | 14 | 205 | 680 | 86 | 573 | 1.88e-94 | 306 |
| Msa0145730 | AT1G04430.2 | 36.653 | 502 | 278 | 14 | 205 | 680 | 86 | 573 | 1.88e-94 | 306 |
| Msa0145730 | AT1G33170.1 | 34.690 | 516 | 283 | 14 | 195 | 668 | 92 | 595 | 4.04e-91 | 298 |
| Msa0145730 | AT4G00740.1 | 37.174 | 460 | 252 | 14 | 231 | 668 | 110 | 554 | 5.36e-91 | 296 |
| Msa0145730 | AT4G00740.2 | 37.174 | 460 | 252 | 14 | 231 | 668 | 110 | 554 | 5.36e-91 | 296 |
| Msa0145730 | AT4G10440.1 | 34.420 | 491 | 280 | 13 | 210 | 669 | 99 | 578 | 1.88e-88 | 291 |
| Msa0145730 | AT5G04060.1 | 35.625 | 480 | 266 | 13 | 214 | 666 | 93 | 556 | 4.55e-88 | 289 |
| Msa0145730 | AT5G14430.1 | 36.049 | 491 | 278 | 12 | 205 | 669 | 82 | 562 | 1.91e-87 | 287 |
| Msa0145730 | AT2G45750.1 | 34.413 | 494 | 271 | 15 | 214 | 668 | 97 | 576 | 3.16e-87 | 287 |
| Msa0145730 | AT2G43200.2 | 35.670 | 485 | 271 | 13 | 213 | 668 | 100 | 572 | 9.92e-87 | 285 |
| Msa0145730 | AT2G43200.1 | 35.670 | 485 | 271 | 13 | 213 | 668 | 100 | 572 | 9.92e-87 | 285 |
| Msa0145730 | AT3G10200.1 | 34.583 | 480 | 274 | 12 | 207 | 666 | 87 | 546 | 4.94e-86 | 283 |
| Msa0145730 | AT5G14430.2 | 35.642 | 491 | 280 | 12 | 205 | 669 | 82 | 562 | 6.38e-86 | 283 |
| Msa0145730 | AT4G00750.1 | 34.008 | 494 | 271 | 16 | 214 | 668 | 106 | 583 | 7.60e-83 | 276 |
| Msa0145730 | AT3G10200.2 | 34.183 | 471 | 270 | 12 | 207 | 657 | 87 | 537 | 3.68e-82 | 273 |
| Msa0145730 | AT4G18030.1 | 34.008 | 494 | 284 | 14 | 203 | 668 | 85 | 564 | 4.45e-81 | 271 |
| Msa0145730 | AT1G26850.2 | 33.002 | 503 | 277 | 16 | 206 | 669 | 89 | 570 | 1.20e-79 | 267 |
| Msa0145730 | AT1G26850.1 | 33.002 | 503 | 277 | 16 | 206 | 669 | 89 | 570 | 1.20e-79 | 267 |
| Msa0145730 | AT4G19120.3 | 34.954 | 432 | 242 | 11 | 212 | 614 | 78 | 499 | 9.14e-78 | 258 |
| Msa0145730 | AT1G78240.1 | 30.934 | 514 | 295 | 16 | 202 | 668 | 142 | 642 | 6.43e-70 | 242 |
| Msa0145730 | AT1G78240.2 | 30.934 | 514 | 295 | 16 | 202 | 668 | 142 | 642 | 6.43e-70 | 242 |
| Msa0145730 | AT1G13860.4 | 32.072 | 502 | 274 | 16 | 209 | 667 | 86 | 563 | 1.25e-69 | 239 |
| Msa0145730 | AT1G13860.3 | 32.072 | 502 | 274 | 16 | 209 | 667 | 86 | 563 | 1.25e-69 | 239 |
| Msa0145730 | AT1G13860.1 | 32.072 | 502 | 274 | 16 | 209 | 667 | 86 | 563 | 1.25e-69 | 239 |
| Msa0145730 | AT1G13860.5 | 32.072 | 502 | 274 | 16 | 209 | 667 | 86 | 563 | 1.25e-69 | 239 |
| Msa0145730 | AT2G03480.2 | 32.444 | 487 | 279 | 14 | 209 | 667 | 91 | 555 | 7.66e-67 | 232 |
| Msa0145730 | AT2G03480.1 | 31.673 | 502 | 274 | 14 | 209 | 667 | 91 | 566 | 9.54e-66 | 229 |
| Msa0145730 | AT1G13860.2 | 33.735 | 415 | 221 | 12 | 292 | 667 | 8 | 407 | 1.48e-64 | 221 |
| Msa0145730 | AT1G26850.3 | 28.738 | 428 | 247 | 14 | 206 | 595 | 89 | 496 | 2.64e-47 | 176 |
| Msa0145730 | AT2G03480.3 | 27.760 | 317 | 195 | 10 | 209 | 502 | 91 | 396 | 1.29e-30 | 125 |
Find 160 sgRNAs with CRISPR-Local
Find 353 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATGACAGCTGTAACAATTT+TGG | 0.157752 | 1_4:+5454725 | Msa0145730:CDS |
| TAATCAACTTAATGTGTAAA+AGG | 0.205128 | 1_4:+5459743 | Msa0145730:three_prime_UTR |
| CATCGTTGGTTGGTGGATTC+TGG | 0.212517 | 1_4:+5456237 | Msa0145730:CDS |
| ATATTTCCTCCAATGCATTT+AGG | 0.232930 | 1_4:-5459509 | None:intergenic |
| ATGGTTTCTCTTCCTCTTGA+TGG | 0.247530 | 1_4:+5455404 | Msa0145730:CDS |
| CTCTATTTGTTGGAATGTTC+TGG | 0.254507 | 1_4:+5458120 | Msa0145730:CDS |
| AATCAAATGTTAACTATAGA+TGG | 0.266871 | 1_4:+5455261 | Msa0145730:CDS |
| CACGATTGGTGCGAGTCTTT+TGG | 0.275475 | 1_4:+5458983 | Msa0145730:CDS |
| TAATATATGCAGCTAGTTTC+GGG | 0.294319 | 1_4:-5456209 | None:intergenic |
| TTAATATATGCAGCTAGTTT+CGG | 0.296241 | 1_4:-5456210 | None:intergenic |
| CTCTATCTAAACATAACGTT+TGG | 0.325301 | 1_4:+5458885 | Msa0145730:CDS |
| TCATGAGAGTGAAGTTGATT+TGG | 0.338378 | 1_4:+5455127 | Msa0145730:CDS |
| TCCTGACTGGATGAACAATA+AGG | 0.340719 | 1_4:+5458466 | Msa0145730:CDS |
| CTAAAAGACCAACTGGGTTA+TGG | 0.341620 | 1_4:+5454697 | Msa0145730:CDS |
| GCTGGCATACCCTCCATAGA+TGG | 0.347147 | 1_4:-5458597 | None:intergenic |
| CGCAGCTGCTCTCTTCGATA+AGG | 0.356939 | 1_4:+5456709 | Msa0145730:CDS |
| CGATGAAGATTCTGAGATAT+TGG | 0.360316 | 1_4:+5455190 | Msa0145730:CDS |
| TCAATGGAATGGGCATTAAC+TGG | 0.363494 | 1_4:+5458543 | Msa0145730:CDS |
| CGCGCCACTTCTTTCTTATG+AGG | 0.368271 | 1_4:-5454987 | None:intergenic |
| TCGTATATGTCATTTCCTTC+AGG | 0.373427 | 1_4:-5458193 | None:intergenic |
| GAGATATGACTTGTTAACTA+TGG | 0.375456 | 1_4:-5458522 | None:intergenic |
| TAAAAGACCAACTGGGTTAT+GGG | 0.378287 | 1_4:+5454698 | Msa0145730:CDS |
| CACTGACAGCCTCTATTTGT+TGG | 0.385291 | 1_4:+5458110 | Msa0145730:CDS |
| ATGAAAATCCCGACGCAGTC+TGG | 0.390934 | 1_4:+5458254 | Msa0145730:CDS |
| AAAATTATGGGAAGCGTATC+CGG | 0.395966 | 1_4:-5458935 | None:intergenic |
| CGTCAAGCTAAAAGACCAAC+TGG | 0.396592 | 1_4:+5454690 | Msa0145730:CDS |
| AGCCTCTTCGGCCATTCCTC+AGG | 0.398893 | 1_4:-5458434 | None:intergenic |
| GGAAGATAAAGAAGAAGGAT+TGG | 0.399828 | 1_4:+5455103 | Msa0145730:CDS |
| AGTGATGATGTTGGTGAAGT+TGG | 0.403680 | 1_4:+5458151 | Msa0145730:CDS |
| GCATTAACTGGACAAATATC+AGG | 0.404692 | 1_4:+5458555 | Msa0145730:CDS |
| TCCTTATTGTTCATCCAGTC+AGG | 0.410033 | 1_4:-5458467 | None:intergenic |
| AAGGATGCCCTTCATGTGTA+TGG | 0.411332 | 1_4:+5455385 | Msa0145730:CDS |
| GGAAGTCTCCTTCTAGCAAA+AGG | 0.412928 | 1_4:-5456821 | None:intergenic |
| TATACCTTCAATTTGCTCTC+AGG | 0.413276 | 1_4:-5455449 | None:intergenic |
| TGTTTGCACACCATTCCAAT+TGG | 0.418735 | 1_4:+5458386 | Msa0145730:CDS |
| GAATGTGAATCAAGGGTCAT+TGG | 0.427690 | 1_4:+5455052 | Msa0145730:CDS |
| ATGGACATGAAATCCATCTA+TGG | 0.430968 | 1_4:+5458584 | Msa0145730:CDS |
| CCATGCTGTTCAATTCCAAT+TGG | 0.431043 | 1_4:-5458401 | None:intergenic |
| GCAGCTGCTCTCTTCGATAA+GGG | 0.439107 | 1_4:+5456710 | Msa0145730:CDS |
| GGAAAAGTTTCGAGCCTCTT+CGG | 0.440914 | 1_4:-5458446 | None:intergenic |
| TCTATCTAAACATAACGTTT+GGG | 0.453133 | 1_4:+5458886 | Msa0145730:CDS |
| AACTTCTACTGGAGATGAAT+CGG | 0.456963 | 1_4:+5457030 | Msa0145730:CDS |
| GGTATATATTAGAGGGTTCA+AGG | 0.458635 | 1_4:-5459615 | None:intergenic |
| TGCAGAAGGTCATAAGTTCT+TGG | 0.460158 | 1_4:-5459013 | None:intergenic |
| AGAGTTAAAGAAAACAAAGA+AGG | 0.466174 | 1_4:+5455214 | Msa0145730:CDS |
| TTCAATTTGCTCTCAGGCCA+CGG | 0.468060 | 1_4:-5455443 | None:intergenic |
| AATAAAGAGAATGTGAATCA+AGG | 0.469706 | 1_4:+5455044 | Msa0145730:CDS |
| AGCGTATCCGGTGCATGGAC+AGG | 0.477410 | 1_4:-5458923 | None:intergenic |
| TTGCTCTCAGGCCACGGCAC+CGG | 0.477467 | 1_4:-5455437 | None:intergenic |
| ATCAAGTCATGGTGGGACTC+TGG | 0.478808 | 1_4:-5459666 | None:intergenic |
| ATACACATGAAGGGCATCCT+TGG | 0.479666 | 1_4:-5455383 | None:intergenic |
| GCAAAAGGGCTAACCAATGT+TGG | 0.480251 | 1_4:-5456806 | None:intergenic |
| GCAGCATACCAGACTGCGTC+GGG | 0.480849 | 1_4:-5458262 | None:intergenic |
| AAGTCATATCTCAATGGAAT+GGG | 0.482780 | 1_4:+5458533 | Msa0145730:CDS |
| CCTTGCATTGATATCGAAGT+AGG | 0.484188 | 1_4:+5455320 | Msa0145730:CDS |
| GACAAATATCAGGAATGTAA+TGG | 0.487358 | 1_4:+5458565 | Msa0145730:CDS |
| AATATTGAGAAGTATGCAAT+GGG | 0.493277 | 1_4:+5459527 | Msa0145730:CDS |
| TTGAGATGGACCGTATCTTA+CGG | 0.493909 | 1_4:+5459447 | Msa0145730:CDS |
| CAAAAGGGCTAACCAATGTT+GGG | 0.497358 | 1_4:-5456805 | None:intergenic |
| TCTTGATGGTTATGAGTCTC+CGG | 0.498170 | 1_4:+5455418 | Msa0145730:CDS |
| GTTGAAAGTCCTAAATGCAT+TGG | 0.498358 | 1_4:+5459500 | Msa0145730:CDS |
| TATGTGCACAGAAAACTCTA+TGG | 0.503076 | 1_4:+5459589 | Msa0145730:CDS |
| TGTTCTCACGCCTCAAAAGC+AGG | 0.503114 | 1_4:+5459047 | Msa0145730:CDS |
| CAATTGGAATTGAACAGCAT+GGG | 0.508639 | 1_4:+5458402 | Msa0145730:CDS |
| ACCCTCCTGGCCGTAAGATA+CGG | 0.511729 | 1_4:-5459457 | None:intergenic |
| TCAAGGGTCATTGGAGAAAG+AGG | 0.512731 | 1_4:+5455061 | Msa0145730:CDS |
| TTGGATTCTGATGTTGTTGG+TGG | 0.513871 | 1_4:+5455146 | Msa0145730:CDS |
| GATAGCATTGAAGAAGAAGA+AGG | 0.514633 | 1_4:+5457095 | Msa0145730:CDS |
| CAAGTCATATCTCAATGGAA+TGG | 0.517713 | 1_4:+5458532 | Msa0145730:CDS |
| AGAGGCTGTCAGTGCGGTCA+TGG | 0.519681 | 1_4:-5458101 | None:intergenic |
| GAGTTGGAAGATAAAGAAGA+AGG | 0.521615 | 1_4:+5455098 | Msa0145730:CDS |
| CCACTTGAGCTAAGTCCACT+AGG | 0.524362 | 1_4:-5456766 | None:intergenic |
| GATTTGGATTCTGATGTTGT+TGG | 0.526320 | 1_4:+5455143 | Msa0145730:CDS |
| CAGAACATTCCAACAAATAG+AGG | 0.526503 | 1_4:-5458119 | None:intergenic |
| CGTATGATCGTCAACCCTCC+TGG | 0.526562 | 1_4:-5459470 | None:intergenic |
| TGATCGCGGACACCAACCAT+TGG | 0.528068 | 1_4:+5458495 | Msa0145730:CDS |
| GTGTGCAAACAAGTCTTGAT+TGG | 0.528299 | 1_4:-5458374 | None:intergenic |
| ATAAAGAGAATGTGAATCAA+GGG | 0.529921 | 1_4:+5455045 | Msa0145730:CDS |
| GTGGTGGAAAGGTGCAGTAC+CGG | 0.532025 | 1_4:+5455342 | Msa0145730:CDS |
| CCAATTGGAATTGAACAGCA+TGG | 0.533438 | 1_4:+5458401 | Msa0145730:CDS |
| GAGTTAAAGAAAACAAAGAA+GGG | 0.534176 | 1_4:+5455215 | Msa0145730:CDS |
| GACAACTCCTCTCCGTGTGC+CGG | 0.534753 | 1_4:-5455361 | None:intergenic |
| GGGCAGAGTGGCCTGAGGAA+TGG | 0.534846 | 1_4:+5458423 | Msa0145730:CDS |
| GAAGTCTCCTTCTAGCAAAA+GGG | 0.539434 | 1_4:-5456820 | None:intergenic |
| TTAACATTTGATTCAAACAA+AGG | 0.539982 | 1_4:-5455251 | None:intergenic |
| AACTATGGCGTTCCAATGGT+TGG | 0.540107 | 1_4:-5458507 | None:intergenic |
| GCGCCACTTCTTTCTTATGA+GGG | 0.540710 | 1_4:-5454986 | None:intergenic |
| GAAAGTCCTAAATGCATTGG+AGG | 0.540768 | 1_4:+5459503 | Msa0145730:CDS |
| AAGAGAAACCATACACATGA+AGG | 0.545446 | 1_4:-5455393 | None:intergenic |
| GTTAACAAGTCATATCTCAA+TGG | 0.546595 | 1_4:+5458527 | Msa0145730:CDS |
| AGCATACCTTGGCATTCCAA+TGG | 0.553335 | 1_4:+5456887 | Msa0145730:CDS |
| AATCAGAATGACTTTCTACC+AGG | 0.554059 | 1_4:+5459551 | Msa0145730:CDS |
| ATTCGTGTTGTCCTGGACAT+TGG | 0.555137 | 1_4:+5456668 | Msa0145730:CDS |
| AGTCGAGGGAAAGAATATCA+TGG | 0.558818 | 1_4:-5459696 | None:intergenic |
| TGTTTGAAGAAATAGAACAT+TGG | 0.560848 | 1_4:+5459898 | Msa0145730:three_prime_UTR |
| ATGGACCGTATCTTACGGCC+AGG | 0.560956 | 1_4:+5459452 | Msa0145730:CDS |
| AATCTGTACATCCAATGTCC+AGG | 0.561710 | 1_4:-5456679 | None:intergenic |
| AAATATTGAGAAGTATGCAA+TGG | 0.561804 | 1_4:+5459526 | Msa0145730:CDS |
| TGGGAAGCGTATCCGGTGCA+TGG | 0.562242 | 1_4:-5458928 | None:intergenic |
| TGTTAACTATGGCGTTCCAA+TGG | 0.562942 | 1_4:-5458511 | None:intergenic |
| CCTAGTGGACTTAGCTCAAG+TGG | 0.563137 | 1_4:+5456766 | Msa0145730:CDS |
| AGATGGTACCAGACATTGAG+TGG | 0.564162 | 1_4:+5456636 | Msa0145730:intron |
| CGAGCGCGGCTTCCCAACAT+TGG | 0.565538 | 1_4:+5456793 | Msa0145730:CDS |
| GTGCACGTTGCAGCATACCT+TGG | 0.566173 | 1_4:+5456876 | Msa0145730:CDS |
| ACAAAGAAGGGAAAAGTGAA+AGG | 0.567820 | 1_4:+5455227 | Msa0145730:CDS |
| ATGACATATACGAATTGAGA+AGG | 0.575466 | 1_4:+5458203 | Msa0145730:CDS |
| GTGGCCTGAGAGCAAATTGA+AGG | 0.576440 | 1_4:+5455445 | Msa0145730:CDS |
| AAAGAAACGTGTGCATAAGA+AGG | 0.577823 | 1_4:+5455013 | Msa0145730:CDS |
| GAGAGATAACAATTCAATGT+GGG | 0.586661 | 1_4:+5459930 | Msa0145730:three_prime_UTR |
| ACAAATGATCAGCATGCAGA+AGG | 0.594137 | 1_4:-5459027 | None:intergenic |
| CTATCTTGAGTCGATTGAAG+AGG | 0.595938 | 1_4:+5456314 | Msa0145730:CDS |
| CTGTTCAATTCCAATTGGAA+TGG | 0.597922 | 1_4:-5458396 | None:intergenic |
| GCTCAAGTGGCACTCGAGCG+CGG | 0.598647 | 1_4:+5456779 | Msa0145730:CDS |
| ATGGAATTTGAATCAAGTCA+TGG | 0.598850 | 1_4:-5459677 | None:intergenic |
| TACAAACCATTGGAATGCCA+AGG | 0.599774 | 1_4:-5456893 | None:intergenic |
| GACATGAAATCCATCTATGG+AGG | 0.599957 | 1_4:+5458587 | Msa0145730:CDS |
| TGTAGTACCTGTCCATGCAC+CGG | 0.602517 | 1_4:+5458916 | Msa0145730:CDS |
| TCATTGGAGAAAGAGGAAGA+AGG | 0.607017 | 1_4:+5455068 | Msa0145730:CDS |
| ATCTTCACCCATAACCCAGT+TGG | 0.609231 | 1_4:-5454705 | None:intergenic |
| GCGCCCTCATAAGAAAGAAG+TGG | 0.610087 | 1_4:+5454983 | Msa0145730:CDS |
| TGCAGTACCGGCACACGGAG+AGG | 0.611552 | 1_4:+5455354 | Msa0145730:CDS |
| TATCTCAGAATCTTCATCGA+CGG | 0.613988 | 1_4:-5455186 | None:intergenic |
| ACCGTATCTTACGGCCAGGA+GGG | 0.614741 | 1_4:+5459456 | Msa0145730:CDS |
| TGTGTCGATTGTTGTTGAGA+TGG | 0.618841 | 1_4:+5459433 | Msa0145730:CDS |
| AGAGAGATAACAATTCAATG+TGG | 0.621173 | 1_4:+5459929 | Msa0145730:three_prime_UTR |
| ATTGATATCGAAGTAGGTGG+TGG | 0.622929 | 1_4:+5455326 | Msa0145730:CDS |
| TTGATTCACGTGTAAGTCGA+GGG | 0.625600 | 1_4:-5459710 | None:intergenic |
| ATTGATTCACGTGTAAGTCG+AGG | 0.625907 | 1_4:-5459711 | None:intergenic |
| AATTGGAATTGAACAGCATG+GGG | 0.627104 | 1_4:+5458403 | Msa0145730:CDS |
| GGCCTGAGGAATGGCCGAAG+AGG | 0.629075 | 1_4:+5458432 | Msa0145730:CDS |
| AGAATATATCAAAAGCCTGA+AGG | 0.629533 | 1_4:+5458178 | Msa0145730:CDS |
| ACACGGAGAGGAGTTGTCCA+AGG | 0.632925 | 1_4:+5455366 | Msa0145730:CDS |
| AATCGGATTCTAAGACCTGG+TGG | 0.635756 | 1_4:+5457047 | Msa0145730:CDS |
| GATGGTACCAGACATTGAGT+GGG | 0.637533 | 1_4:+5456637 | Msa0145730:intron |
| GTTATGAGTCTCCGGTGCCG+TGG | 0.638672 | 1_4:+5455426 | Msa0145730:CDS |
| GACCGTATCTTACGGCCAGG+AGG | 0.642174 | 1_4:+5459455 | Msa0145730:CDS |
| TATCGAAGTAGGTGGTGGAA+AGG | 0.642635 | 1_4:+5455331 | Msa0145730:CDS |
| GAATTTGAATCAAGTCATGG+TGG | 0.644298 | 1_4:-5459674 | None:intergenic |
| GAAACGTGTGCATAAGAAGG+AGG | 0.648185 | 1_4:+5455016 | Msa0145730:CDS |
| AGAGAAACCATACACATGAA+GGG | 0.650111 | 1_4:-5455392 | None:intergenic |
| ACATGAAATCCATCTATGGA+GGG | 0.652438 | 1_4:+5458588 | Msa0145730:CDS |
| ATGAATCGGATTCTAAGACC+TGG | 0.653113 | 1_4:+5457044 | Msa0145730:CDS |
| AATTTGAATCAAGTCATGGT+GGG | 0.654326 | 1_4:-5459673 | None:intergenic |
| CATAAGAAAGAAGTGGCGCG+TGG | 0.655219 | 1_4:+5454990 | Msa0145730:CDS |
| AAAGGTGCAGTACCGGCACA+CGG | 0.659564 | 1_4:+5455349 | Msa0145730:CDS |
| AGCAGCATACCAGACTGCGT+CGG | 0.659641 | 1_4:-5458263 | None:intergenic |
| GTGCACAGAAAACTCTATGG+AGG | 0.659798 | 1_4:+5459592 | Msa0145730:CDS |
| TGCATTGATATCGAAGTAGG+TGG | 0.661775 | 1_4:+5455323 | Msa0145730:CDS |
| ATCTCAACAACAATCGACAC+AGG | 0.661847 | 1_4:-5459431 | None:intergenic |
| GCACATAAAAGTGATGATGT+TGG | 0.662214 | 1_4:+5458142 | Msa0145730:CDS |
| GGAGACTCATAACCATCAAG+AGG | 0.664207 | 1_4:-5455416 | None:intergenic |
| TGGCTTGAAAGATGACCTAG+TGG | 0.665585 | 1_4:+5456751 | Msa0145730:CDS |
| TTGAACAGCATGGGGCAGAG+TGG | 0.669285 | 1_4:+5458411 | Msa0145730:CDS |
| GACATGATGAAGTATCCACC+AGG | 0.675601 | 1_4:-5457062 | None:intergenic |
| CCTACTTCGATATCAATGCA+AGG | 0.678756 | 1_4:-5455320 | None:intergenic |
| GTCAAGCTAAAAGACCAACT+GGG | 0.685042 | 1_4:+5454691 | Msa0145730:CDS |
| GCATGGGGCAGAGTGGCCTG+AGG | 0.694517 | 1_4:+5458418 | Msa0145730:CDS |
| ACAAATAGAGGCTGTCAGTG+CGG | 0.698581 | 1_4:-5458107 | None:intergenic |
| CAATAAGGAGAAATTGATCG+CGG | 0.710195 | 1_4:+5458481 | Msa0145730:CDS |
| ATGGTACCAGACATTGAGTG+GGG | 0.716463 | 1_4:+5456638 | Msa0145730:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTCATCATTTTTAAAT+AGG | + | chr1_4:5458345-5458364 | Msa0145730:intron | 10.0% |
| !!! | TGAAAAGTATGTTATATTTA+AGG | + | chr1_4:5455472-5455491 | Msa0145730:intron | 15.0% |
| !!! | GTAAATTTTCATTTATTAGT+CGG | + | chr1_4:5456049-5456068 | Msa0145730:intron | 15.0% |
| !! | AACAGTTAATTAAATACATA+AGG | + | chr1_4:5457416-5457435 | Msa0145730:intron | 15.0% |
| !!! | TTGATTTGTGATTATTTAAA+AGG | - | chr1_4:5457578-5457597 | None:intergenic | 15.0% |
| !! | AATAATCACAAATCAAATAA+TGG | + | chr1_4:5457582-5457601 | Msa0145730:intron | 15.0% |
| !! | ATAACGAATTTATTATTTCA+AGG | - | chr1_4:5457668-5457687 | None:intergenic | 15.0% |
| !! | TAAGGTTGTTTATTAATAAT+AGG | + | chr1_4:5458320-5458339 | Msa0145730:intron | 15.0% |
| !!! | AGTTATTTCTATAGTTAAAA+TGG | + | chr1_4:5459153-5459172 | Msa0145730:intron | 15.0% |
| !!! | GTTATTTCTATAGTTAAAAT+GGG | + | chr1_4:5459154-5459173 | Msa0145730:intron | 15.0% |
| !! | ATTTATTGTTAAAAGCAATT+TGG | - | chr1_4:5459395-5459414 | None:intergenic | 15.0% |
| !! | AAAAAATGGTATATATTAGA+GGG | - | chr1_4:5459625-5459644 | None:intergenic | 15.0% |
| !! | AAAAAAATGGTATATATTAG+AGG | - | chr1_4:5459626-5459645 | None:intergenic | 15.0% |
| !!! | TCTAATATATACCATTTTTT+TGG | + | chr1_4:5459625-5459644 | Msa0145730:CDS | 15.0% |
| !! | TTAACATTTGATTCAAACAA+AGG | - | chr1_4:5455254-5455273 | None:intergenic | 20.0% |
| !! | AATCAAATGTTAACTATAGA+TGG | + | chr1_4:5455261-5455280 | Msa0145730:CDS | 20.0% |
| !! | CATATATTAAAAAACATCGT+TGG | + | chr1_4:5456223-5456242 | Msa0145730:CDS | 20.0% |
| !! | ATACAATGATTATGTTTAAG+AGG | - | chr1_4:5456376-5456395 | None:intergenic | 20.0% |
| !! | GATAGAACATTAGTTAATAA+TGG | + | chr1_4:5456403-5456422 | Msa0145730:intron | 20.0% |
| !! | AAAATACCAAAATTATAGAC+TGG | - | chr1_4:5456921-5456940 | None:intergenic | 20.0% |
| !! | TGAAAAAAAAAATGAAAGGA+TGG | - | chr1_4:5457003-5457022 | None:intergenic | 20.0% |
| !!! | ATCCTTTCATTTTTTTTTTC+AGG | + | chr1_4:5457002-5457021 | Msa0145730:intron | 20.0% |
| !!! | TCCTTTCATTTTTTTTTTCA+GGG | + | chr1_4:5457003-5457022 | Msa0145730:intron | 20.0% |
| !!! | ATAAAACAAGAGTATTAACT+GGG | + | chr1_4:5457354-5457373 | Msa0145730:intron | 20.0% |
| !! | TCTCACTTATAAATCAATTT+CGG | + | chr1_4:5457750-5457769 | Msa0145730:intron | 20.0% |
| !!! | TTTTCATTTTCTTTGCAAAT+TGG | - | chr1_4:5458241-5458260 | None:intergenic | 20.0% |
| !!! | TTTTTCCTTATATTTAAGTC+CGG | - | chr1_4:5458686-5458705 | None:intergenic | 20.0% |
| !! | TTATTTCCATAAGTTACAAT+AGG | + | chr1_4:5459211-5459230 | Msa0145730:intron | 20.0% |
| !! | TAATCAACTTAATGTGTAAA+AGG | + | chr1_4:5459743-5459762 | Msa0145730:three_prime_UTR | 20.0% |
| !! | TGTTGTTGTAAAAAATTACT+TGG | + | chr1_4:5459865-5459884 | Msa0145730:intron | 20.0% |
| !!! | GTCTCTGTTTTATTTTTGTT+TGG | + | chr1_4:5454748-5454767 | Msa0145730:CDS | 25.0% |
| !!! | TTCTTCTGTTAGTTTTCAAA+GGG | + | chr1_4:5454791-5454810 | Msa0145730:CDS | 25.0% |
| !! | ATGAGAAAAAGATTGATGAT+GGG | + | chr1_4:5454937-5454956 | Msa0145730:CDS | 25.0% |
| ! | AATAAAGAGAATGTGAATCA+AGG | + | chr1_4:5455044-5455063 | Msa0145730:CDS | 25.0% |
| ! | ATAAAGAGAATGTGAATCAA+GGG | + | chr1_4:5455045-5455064 | Msa0145730:CDS | 25.0% |
| ! | AGAGTTAAAGAAAACAAAGA+AGG | + | chr1_4:5455214-5455233 | Msa0145730:CDS | 25.0% |
| ! | GAGTTAAAGAAAACAAAGAA+GGG | + | chr1_4:5455215-5455234 | Msa0145730:CDS | 25.0% |
| !! | GTTATATTTAAGGTCTAGTT+TGG | + | chr1_4:5455482-5455501 | Msa0145730:intron | 25.0% |
| ! | ATCCATATAAGCTTATAGTA+TGG | + | chr1_4:5455560-5455579 | Msa0145730:intron | 25.0% |
| ! | CTTATAGTATGGAGAATTTA+GGG | + | chr1_4:5455571-5455590 | Msa0145730:intron | 25.0% |
| ! | AAGCTTATTTGAGAGTTTAT+GGG | - | chr1_4:5455710-5455729 | None:intergenic | 25.0% |
| ! | TAAGCTTATTTGAGAGTTTA+TGG | - | chr1_4:5455711-5455730 | None:intergenic | 25.0% |
| ! | CGTAAGCAATTATATGATAA+TGG | - | chr1_4:5455789-5455808 | None:intergenic | 25.0% |
| ! | TTTCATTTATTAGTCGGATA+AGG | + | chr1_4:5456055-5456074 | Msa0145730:intron | 25.0% |
| !! | TTAATATATGCAGCTAGTTT+CGG | - | chr1_4:5456213-5456232 | None:intergenic | 25.0% |
| ! | TATTAAAAAACATCGTTGGT+TGG | + | chr1_4:5456227-5456246 | Msa0145730:CDS | 25.0% |
| !! | AAAGAAATGAGACTATGTTT+TGG | - | chr1_4:5456442-5456461 | None:intergenic | 25.0% |
| ! | AAAACATAGTCTCATTTCTT+TGG | + | chr1_4:5456441-5456460 | Msa0145730:intron | 25.0% |
| !! | TGTATTCCAGTCTATAATTT+TGG | + | chr1_4:5456912-5456931 | Msa0145730:intron | 25.0% |
| !!! | CCTTTCATTTTTTTTTTCAG+GGG | + | chr1_4:5457004-5457023 | Msa0145730:intron | 25.0% |
| !!! | CTTTCATTTTTTTTTTCAGG+GGG | + | chr1_4:5457005-5457024 | Msa0145730:intron | 25.0% |
| !!! | GATAAAACAAGAGTATTAAC+TGG | + | chr1_4:5457353-5457372 | Msa0145730:intron | 25.0% |
| !! | GTAATTCAGTTTTCAATTAC+AGG | - | chr1_4:5457467-5457486 | None:intergenic | 25.0% |
| ! | GTCAATGATAGAATTATGTA+AGG | - | chr1_4:5457542-5457561 | None:intergenic | 25.0% |
| !! | TGTATTGCATTTTGTATTCT+AGG | - | chr1_4:5457614-5457633 | None:intergenic | 25.0% |
| ! | TCTGAAAATGAGTTTATAAG+CGG | - | chr1_4:5457938-5457957 | None:intergenic | 25.0% |
| !! | AGCAAAAAAGTACATGTATT+TGG | - | chr1_4:5458737-5458756 | None:intergenic | 25.0% |
| ! | TCTATCTAAACATAACGTTT+GGG | + | chr1_4:5458886-5458905 | Msa0145730:CDS | 25.0% |
| ! | AAAGATAAGTACAACAATAC+TGG | - | chr1_4:5459089-5459108 | None:intergenic | 25.0% |
| ! | AAACTTCCTATTGTAACTTA+TGG | - | chr1_4:5459220-5459239 | None:intergenic | 25.0% |
| !! | GCTTTTAACAATAAATTTGC+AGG | + | chr1_4:5459399-5459418 | Msa0145730:intron | 25.0% |
| !! | AAATATTGAGAAGTATGCAA+TGG | + | chr1_4:5459526-5459545 | Msa0145730:CDS | 25.0% |
| !! | AATATTGAGAAGTATGCAAT+GGG | + | chr1_4:5459527-5459546 | Msa0145730:CDS | 25.0% |
| ! | TGTTTGAAGAAATAGAACAT+TGG | + | chr1_4:5459898-5459917 | Msa0145730:three_prime_UTR | 25.0% |
| ! | ATGACAGCTGTAACAATTTT+GGG | + | chr1_4:5454726-5454745 | Msa0145730:CDS | 30.0% |
| !!! | CTTCTTCTGTTAGTTTTCAA+AGG | + | chr1_4:5454790-5454809 | Msa0145730:CDS | 30.0% |
| !!! | TGGTGTTGGTTTTTTAACAT+TGG | - | chr1_4:5454865-5454884 | None:intergenic | 30.0% |
| GATGAGAAAAAGATTGATGA+TGG | + | chr1_4:5454936-5454955 | Msa0145730:CDS | 30.0% | |
| !!! | TGGATTAGCTTTTAGATTGT+TGG | + | chr1_4:5455502-5455521 | Msa0145730:intron | 30.0% |
| !!! | ATTAGCTTTTAGATTGTTGG+AGG | + | chr1_4:5455505-5455524 | Msa0145730:intron | 30.0% |
| CTCCATACTATAAGCTTATA+TGG | - | chr1_4:5455565-5455584 | None:intergenic | 30.0% | |
| GCTTATAGTATGGAGAATTT+AGG | + | chr1_4:5455570-5455589 | Msa0145730:intron | 30.0% | |
| ! | ATTAAGTTGTTTAGCCTACT+AGG | + | chr1_4:5455822-5455841 | Msa0145730:intron | 30.0% |
| ! | TTAAGTTGTTTAGCCTACTA+GGG | + | chr1_4:5455823-5455842 | Msa0145730:intron | 30.0% |
| AATCCTAGTAGAAGCTTATA+GGG | - | chr1_4:5455915-5455934 | None:intergenic | 30.0% | |
| AAATCCTAGTAGAAGCTTAT+AGG | - | chr1_4:5455916-5455935 | None:intergenic | 30.0% | |
| AAACATGTAGATATTGCAAG+AGG | + | chr1_4:5456006-5456025 | Msa0145730:intron | 30.0% | |
| TGTTATCTCACAGTAACATT+TGG | + | chr1_4:5456152-5456171 | Msa0145730:intron | 30.0% | |
| ! | TAATATATGCAGCTAGTTTC+GGG | - | chr1_4:5456212-5456231 | None:intergenic | 30.0% |
| !!! | AAAATTCTGACTGGTTTTGA+GGG | - | chr1_4:5456278-5456297 | None:intergenic | 30.0% |
| !!! | AAAAATTCTGACTGGTTTTG+AGG | - | chr1_4:5456279-5456298 | None:intergenic | 30.0% |
| ! | TCAAAACCAGTCAGAATTTT+TGG | + | chr1_4:5456278-5456297 | Msa0145730:CDS | 30.0% |
| ! | CAAAACCAGTCAGAATTTTT+GGG | + | chr1_4:5456279-5456298 | Msa0145730:CDS | 30.0% |
| TTAGAATGATGCTTGTTTGT+TGG | + | chr1_4:5456348-5456367 | Msa0145730:intron | 30.0% | |
| TTTCAAGATGTTTGCAAAGA+TGG | - | chr1_4:5456599-5456618 | None:intergenic | 30.0% | |
| CTTGTCCTGAAAATTATAGA+TGG | + | chr1_4:5456619-5456638 | Msa0145730:intron | 30.0% | |
| ! | TGGTACCATCTATAATTTTC+AGG | - | chr1_4:5456627-5456646 | None:intergenic | 30.0% |
| TAAAAATATTCGTGTTGTCC+TGG | + | chr1_4:5456661-5456680 | Msa0145730:CDS | 30.0% | |
| !! | TCAAAAACTTGACTTGGAAA+AGG | - | chr1_4:5456845-5456864 | None:intergenic | 30.0% |
| ATAGCATCAAAAACTTGACT+TGG | - | chr1_4:5456851-5456870 | None:intergenic | 30.0% | |
| CCCCTGAAAAAAAAAATGAA+AGG | - | chr1_4:5457007-5457026 | None:intergenic | 30.0% | |
| TGCACTCATTGATGAAATAA+AGG | + | chr1_4:5457143-5457162 | Msa0145730:intron | 30.0% | |
| TGTTTCTTGTGATTCATTCT+CGG | + | chr1_4:5457171-5457190 | Msa0145730:intron | 30.0% | |
| TAACCATGCTTAAAATCAGA+GGG | - | chr1_4:5457203-5457222 | None:intergenic | 30.0% | |
| ATAACCATGCTTAAAATCAG+AGG | - | chr1_4:5457204-5457223 | None:intergenic | 30.0% | |
| ! | GATTTTAAGCATGGTTATCA+TGG | + | chr1_4:5457206-5457225 | Msa0145730:intron | 30.0% |
| CAAAAACACGATATTTAACC+AGG | + | chr1_4:5457275-5457294 | Msa0145730:intron | 30.0% | |
| ATTTAACCAGGTGTATGTAA+AGG | + | chr1_4:5457287-5457306 | Msa0145730:intron | 30.0% | |
| TTTAACCAGGTGTATGTAAA+GGG | + | chr1_4:5457288-5457307 | Msa0145730:intron | 30.0% | |
| AGGTTCATTTGTTTGATTCT+AGG | - | chr1_4:5457648-5457667 | None:intergenic | 30.0% | |
| GTCTCACATTAGATGAAATA+TGG | - | chr1_4:5457777-5457796 | None:intergenic | 30.0% | |
| CTGAAAATGAGTTTATAAGC+GGG | - | chr1_4:5457937-5457956 | None:intergenic | 30.0% | |
| TTGTAGTGTGAGTTTATAAG+TGG | + | chr1_4:5458028-5458047 | Msa0145730:intron | 30.0% | |
| AGAATATATCAAAAGCCTGA+AGG | + | chr1_4:5458178-5458197 | Msa0145730:CDS | 30.0% | |
| ATGACATATACGAATTGAGA+AGG | + | chr1_4:5458203-5458222 | Msa0145730:CDS | 30.0% | |
| ! | CATTTTCTTTGCAAATTGGT+GGG | - | chr1_4:5458237-5458256 | None:intergenic | 30.0% |
| ! | TCATTTTCTTTGCAAATTGG+TGG | - | chr1_4:5458238-5458257 | None:intergenic | 30.0% |
| !! | ACTTGTTTCTAATCAGCTTA+AGG | + | chr1_4:5458302-5458321 | Msa0145730:intron | 30.0% |
| !! | GAGATATGACTTGTTAACTA+TGG | - | chr1_4:5458525-5458544 | None:intergenic | 30.0% |
| GTTAACAAGTCATATCTCAA+TGG | + | chr1_4:5458527-5458546 | Msa0145730:CDS | 30.0% | |
| AAGTCATATCTCAATGGAAT+GGG | + | chr1_4:5458533-5458552 | Msa0145730:CDS | 30.0% | |
| GACAAATATCAGGAATGTAA+TGG | + | chr1_4:5458565-5458584 | Msa0145730:CDS | 30.0% | |
| !! | TTAAAATCAAGTGGTTTTGC+TGG | - | chr1_4:5458618-5458637 | None:intergenic | 30.0% |
| ! | ATTTTCCTTTGATACCATTC+CGG | + | chr1_4:5458664-5458683 | Msa0145730:intron | 30.0% |
| ! | ACATGTATTTGGTTCACATT+TGG | - | chr1_4:5458726-5458745 | None:intergenic | 30.0% |
| AGATGTTGGAAATCATTCAA+TGG | - | chr1_4:5458806-5458825 | None:intergenic | 30.0% | |
| ! | TCATGTTTCTAACAAGATGT+TGG | - | chr1_4:5458820-5458839 | None:intergenic | 30.0% |
| ! | CAGCTAATCTGTATTTTCAT+AGG | - | chr1_4:5458862-5458881 | None:intergenic | 30.0% |
| CTCTATCTAAACATAACGTT+TGG | + | chr1_4:5458885-5458904 | Msa0145730:CDS | 30.0% | |
| AATCCCCGTTCAAAAATTAT+GGG | - | chr1_4:5458950-5458969 | None:intergenic | 30.0% | |
| AAATCCCCGTTCAAAAATTA+TGG | - | chr1_4:5458951-5458970 | None:intergenic | 30.0% | |
| ! | ATTTTTGAACGGGGATTTTT+TGG | + | chr1_4:5458953-5458972 | Msa0145730:CDS | 30.0% |
| AAACGCTAGTATAATGGTTA+TGG | - | chr1_4:5459126-5459145 | None:intergenic | 30.0% | |
| ATATTTCCTCCAATGCATTT+AGG | - | chr1_4:5459512-5459531 | None:intergenic | 30.0% | |
| GTGATGATACACCAAAAAAA+TGG | - | chr1_4:5459639-5459658 | None:intergenic | 30.0% | |
| AATTTGAATCAAGTCATGGT+GGG | - | chr1_4:5459676-5459695 | None:intergenic | 30.0% | |
| ATGGAATTTGAATCAAGTCA+TGG | - | chr1_4:5459680-5459699 | None:intergenic | 30.0% | |
| AGAGAGATAACAATTCAATG+TGG | + | chr1_4:5459929-5459948 | Msa0145730:three_prime_UTR | 30.0% | |
| GAGAGATAACAATTCAATGT+GGG | + | chr1_4:5459930-5459949 | Msa0145730:three_prime_UTR | 30.0% | |
| TAAAAGACCAACTGGGTTAT+GGG | + | chr1_4:5454698-5454717 | Msa0145730:CDS | 35.0% | |
| ! | GATGACAGCTGTAACAATTT+TGG | + | chr1_4:5454725-5454744 | Msa0145730:CDS | 35.0% |
| GAAGAAGAAGAAGAAGAAAC+AGG | - | chr1_4:5454840-5454859 | None:intergenic | 35.0% | |
| !! | CGTTTTTCTGATTTTGGTGT+TGG | - | chr1_4:5454879-5454898 | None:intergenic | 35.0% |
| ACCAAAATCAGAAAAACGTG+TGG | + | chr1_4:5454881-5454900 | Msa0145730:CDS | 35.0% | |
| ! | TCCACACGTTTTTCTGATTT+TGG | - | chr1_4:5454885-5454904 | None:intergenic | 35.0% |
| AAAGAAACGTGTGCATAAGA+AGG | + | chr1_4:5455013-5455032 | Msa0145730:CDS | 35.0% | |
| GAGTTGGAAGATAAAGAAGA+AGG | + | chr1_4:5455098-5455117 | Msa0145730:CDS | 35.0% | |
| GGAAGATAAAGAAGAAGGAT+TGG | + | chr1_4:5455103-5455122 | Msa0145730:CDS | 35.0% | |
| ! | TCATGAGAGTGAAGTTGATT+TGG | + | chr1_4:5455127-5455146 | Msa0145730:CDS | 35.0% |
| GATTTGGATTCTGATGTTGT+TGG | + | chr1_4:5455143-5455162 | Msa0145730:CDS | 35.0% | |
| TATCTCAGAATCTTCATCGA+CGG | - | chr1_4:5455189-5455208 | None:intergenic | 35.0% | |
| !! | CGATGAAGATTCTGAGATAT+TGG | + | chr1_4:5455190-5455209 | Msa0145730:CDS | 35.0% |
| ACAAAGAAGGGAAAAGTGAA+AGG | + | chr1_4:5455227-5455246 | Msa0145730:CDS | 35.0% | |
| AGAGAAACCATACACATGAA+GGG | - | chr1_4:5455395-5455414 | None:intergenic | 35.0% | |
| AAGAGAAACCATACACATGA+AGG | - | chr1_4:5455396-5455415 | None:intergenic | 35.0% | |
| ! | TATACCTTCAATTTGCTCTC+AGG | - | chr1_4:5455452-5455471 | None:intergenic | 35.0% |
| AATCCCTATAAGCTTCTACT+AGG | + | chr1_4:5455909-5455928 | Msa0145730:intron | 35.0% | |
| TTTATTAGTCGGATAAGGCT+CGG | + | chr1_4:5456060-5456079 | Msa0145730:intron | 35.0% | |
| ! | TAAAAAACATCGTTGGTTGG+TGG | + | chr1_4:5456230-5456249 | Msa0145730:CDS | 35.0% |
| GAGATGAAAATGTATCTCTG+TGG | + | chr1_4:5456471-5456490 | Msa0145730:intron | 35.0% | |
| !!! | GGTGTTTTAACATTGTCACT+TGG | + | chr1_4:5456731-5456750 | Msa0145730:CDS | 35.0% |
| TAGACTGGAATACAAACCAT+TGG | - | chr1_4:5456906-5456925 | None:intergenic | 35.0% | |
| AACTTCTACTGGAGATGAAT+CGG | + | chr1_4:5457030-5457049 | Msa0145730:CDS | 35.0% | |
| ! | GATAGCATTGAAGAAGAAGA+AGG | + | chr1_4:5457095-5457114 | Msa0145730:CDS | 35.0% |
| AACCATGCTTAAAATCAGAG+GGG | - | chr1_4:5457202-5457221 | None:intergenic | 35.0% | |
| !! | TCATACAAGTCGGTTTTGTA+GGG | - | chr1_4:5457720-5457739 | None:intergenic | 35.0% |
| !! | ATCATACAAGTCGGTTTTGT+AGG | - | chr1_4:5457721-5457740 | None:intergenic | 35.0% |
| AAAACCTAAGCTGGTACATT+AGG | - | chr1_4:5457863-5457882 | None:intergenic | 35.0% | |
| ! | TACCAGCTTAGGTTTTTATG+TGG | + | chr1_4:5457867-5457886 | Msa0145730:intron | 35.0% |
| ! | ACCAGCTTAGGTTTTTATGT+GGG | + | chr1_4:5457868-5457887 | Msa0145730:intron | 35.0% |
| GCTAATCCTGCTTACAAAAT+CGG | + | chr1_4:5457890-5457909 | Msa0145730:intron | 35.0% | |
| AAAATGAGTTTATAAGCGGG+AGG | - | chr1_4:5457934-5457953 | None:intergenic | 35.0% | |
| CAGAACATTCCAACAAATAG+AGG | - | chr1_4:5458122-5458141 | None:intergenic | 35.0% | |
| ! | CTCTATTTGTTGGAATGTTC+TGG | + | chr1_4:5458120-5458139 | Msa0145730:CDS | 35.0% |
| ! | GCACATAAAAGTGATGATGT+TGG | + | chr1_4:5458142-5458161 | Msa0145730:CDS | 35.0% |
| ! | TCGTATATGTCATTTCCTTC+AGG | - | chr1_4:5458196-5458215 | None:intergenic | 35.0% |
| CTGTTCAATTCCAATTGGAA+TGG | - | chr1_4:5458399-5458418 | None:intergenic | 35.0% | |
| CAATTGGAATTGAACAGCAT+GGG | + | chr1_4:5458402-5458421 | Msa0145730:CDS | 35.0% | |
| AATTGGAATTGAACAGCATG+GGG | + | chr1_4:5458403-5458422 | Msa0145730:CDS | 35.0% | |
| CAATAAGGAGAAATTGATCG+CGG | + | chr1_4:5458481-5458500 | Msa0145730:CDS | 35.0% | |
| CAAGTCATATCTCAATGGAA+TGG | + | chr1_4:5458532-5458551 | Msa0145730:CDS | 35.0% | |
| GCATTAACTGGACAAATATC+AGG | + | chr1_4:5458555-5458574 | Msa0145730:CDS | 35.0% | |
| ATGGACATGAAATCCATCTA+TGG | + | chr1_4:5458584-5458603 | Msa0145730:CDS | 35.0% | |
| ACATGAAATCCATCTATGGA+GGG | + | chr1_4:5458588-5458607 | Msa0145730:CDS | 35.0% | |
| GCAACGAACTTAAAATCAAG+TGG | - | chr1_4:5458627-5458646 | None:intergenic | 35.0% | |
| CCTTATATTTAAGTCCGGAA+TGG | - | chr1_4:5458681-5458700 | None:intergenic | 35.0% | |
| CCATTCCGGACTTAAATATA+AGG | + | chr1_4:5458678-5458697 | Msa0145730:intron | 35.0% | |
| GGAAAAACCATACATGTATC+TGG | + | chr1_4:5458699-5458718 | Msa0145730:intron | 35.0% | |
| ATTTGGACCAGATACATGTA+TGG | - | chr1_4:5458709-5458728 | None:intergenic | 35.0% | |
| ! | AAAATTATGGGAAGCGTATC+CGG | - | chr1_4:5458938-5458957 | None:intergenic | 35.0% |
| ! | CGCTTCCCATAATTTTTGAA+CGG | + | chr1_4:5458942-5458961 | Msa0145730:CDS | 35.0% |
| ! | GCTTCCCATAATTTTTGAAC+GGG | + | chr1_4:5458943-5458962 | Msa0145730:CDS | 35.0% |
| ! | CTTCCCATAATTTTTGAACG+GGG | + | chr1_4:5458944-5458963 | Msa0145730:CDS | 35.0% |
| ATACGCAAACGCTAGTATAA+TGG | - | chr1_4:5459132-5459151 | None:intergenic | 35.0% | |
| AGCTGAAAAAACTTATGCAC+AGG | + | chr1_4:5459249-5459268 | Msa0145730:intron | 35.0% | |
| GTTAAAAGCAATTTGGTCAC+AGG | - | chr1_4:5459388-5459407 | None:intergenic | 35.0% | |
| GTTGAAAGTCCTAAATGCAT+TGG | + | chr1_4:5459500-5459519 | Msa0145730:CDS | 35.0% | |
| AATCAGAATGACTTTCTACC+AGG | + | chr1_4:5459551-5459570 | Msa0145730:CDS | 35.0% | |
| ACTTTCTACCAGGAAAAAGA+GGG | + | chr1_4:5459561-5459580 | Msa0145730:CDS | 35.0% | |
| ! | ATAAGATACCCTCTTTTTCC+TGG | - | chr1_4:5459572-5459591 | None:intergenic | 35.0% |
| TATGTGCACAGAAAACTCTA+TGG | + | chr1_4:5459589-5459608 | Msa0145730:CDS | 35.0% | |
| GGTATATATTAGAGGGTTCA+AGG | - | chr1_4:5459618-5459637 | None:intergenic | 35.0% | |
| GAATTTGAATCAAGTCATGG+TGG | - | chr1_4:5459677-5459696 | None:intergenic | 35.0% | |
| GTCAAGCTAAAAGACCAACT+GGG | + | chr1_4:5454691-5454710 | Msa0145730:CDS | 40.0% | |
| CTAAAAGACCAACTGGGTTA+TGG | + | chr1_4:5454697-5454716 | Msa0145730:CDS | 40.0% | |
| ATCAGAAAAACGTGTGGAAG+TGG | + | chr1_4:5454887-5454906 | Msa0145730:CDS | 40.0% | |
| GAATGTGAATCAAGGGTCAT+TGG | + | chr1_4:5455052-5455071 | Msa0145730:CDS | 40.0% | |
| TCATTGGAGAAAGAGGAAGA+AGG | + | chr1_4:5455068-5455087 | Msa0145730:CDS | 40.0% | |
| GGAAGAAGGTGAAAAAGAGT+TGG | + | chr1_4:5455082-5455101 | Msa0145730:CDS | 40.0% | |
| TTGGATTCTGATGTTGTTGG+TGG | + | chr1_4:5455146-5455165 | Msa0145730:CDS | 40.0% | |
| CCTACTTCGATATCAATGCA+AGG | - | chr1_4:5455323-5455342 | None:intergenic | 40.0% | |
| ! | CCTTGCATTGATATCGAAGT+AGG | + | chr1_4:5455320-5455339 | Msa0145730:CDS | 40.0% |
| ! | TGCATTGATATCGAAGTAGG+TGG | + | chr1_4:5455323-5455342 | Msa0145730:CDS | 40.0% |
| ATTGATATCGAAGTAGGTGG+TGG | + | chr1_4:5455326-5455345 | Msa0145730:CDS | 40.0% | |
| ATGGTTTCTCTTCCTCTTGA+TGG | + | chr1_4:5455404-5455423 | Msa0145730:CDS | 40.0% | |
| ! | TCTTGATGGTTATGAGTCTC+CGG | + | chr1_4:5455418-5455437 | Msa0145730:CDS | 40.0% |
| !! | TCTAGTCTAGCCTTAAGTGT+TGG | + | chr1_4:5456111-5456130 | Msa0145730:intron | 40.0% |
| !! | TCTAGCCTTAAGTGTTGGAT+TGG | + | chr1_4:5456116-5456135 | Msa0145730:intron | 40.0% |
| CCAAACCAATCCAACACTTA+AGG | - | chr1_4:5456124-5456143 | None:intergenic | 40.0% | |
| !! | CCTTAAGTGTTGGATTGGTT+TGG | + | chr1_4:5456121-5456140 | Msa0145730:intron | 40.0% |
| !! | AACCAGTCAGAATTTTTGGG+AGG | + | chr1_4:5456282-5456301 | Msa0145730:CDS | 40.0% |
| !! | ACCAGTCAGAATTTTTGGGA+GGG | + | chr1_4:5456283-5456302 | Msa0145730:CDS | 40.0% |
| CTATCTTGAGTCGATTGAAG+AGG | + | chr1_4:5456314-5456333 | Msa0145730:CDS | 40.0% | |
| CAAGATGTTTGCAAAGATGG+TGG | - | chr1_4:5456596-5456615 | None:intergenic | 40.0% | |
| ! | TTTTTACCCCACTCAATGTC+TGG | - | chr1_4:5456647-5456666 | None:intergenic | 40.0% |
| AATCTGTACATCCAATGTCC+AGG | - | chr1_4:5456682-5456701 | None:intergenic | 40.0% | |
| CAAAAGGGCTAACCAATGTT+GGG | - | chr1_4:5456808-5456827 | None:intergenic | 40.0% | |
| GAAGTCTCCTTCTAGCAAAA+GGG | - | chr1_4:5456823-5456842 | None:intergenic | 40.0% | |
| TACAAACCATTGGAATGCCA+AGG | - | chr1_4:5456896-5456915 | None:intergenic | 40.0% | |
| !! | ATGAATCGGATTCTAAGACC+TGG | + | chr1_4:5457044-5457063 | Msa0145730:CDS | 40.0% |
| ! | TTCCCCTCTGATTTTAAGCA+TGG | + | chr1_4:5457197-5457216 | Msa0145730:intron | 40.0% |
| ! | TGACTGTTTGACTTCACACT+TGG | - | chr1_4:5457388-5457407 | None:intergenic | 40.0% |
| !! | CAAAACCGACTTGTATGATG+AGG | + | chr1_4:5457722-5457741 | Msa0145730:intron | 40.0% |
| GACATCCTCATCATACAAGT+CGG | - | chr1_4:5457730-5457749 | None:intergenic | 40.0% | |
| AGTCATGCGTAACCATTCAT+GGG | - | chr1_4:5457818-5457837 | None:intergenic | 40.0% | |
| AAGTCATGCGTAACCATTCA+TGG | - | chr1_4:5457819-5457838 | None:intergenic | 40.0% | |
| AATGGTTACGCATGACTTGA+GGG | + | chr1_4:5457821-5457840 | Msa0145730:intron | 40.0% | |
| !! | TACAAGCCGATTTTGTAAGC+AGG | - | chr1_4:5457899-5457918 | None:intergenic | 40.0% |
| !! | TGCTTACAAAATCGGCTTGT+AGG | + | chr1_4:5457898-5457917 | Msa0145730:intron | 40.0% |
| !! | GCTTACAAAATCGGCTTGTA+GGG | + | chr1_4:5457899-5457918 | Msa0145730:intron | 40.0% |
| TGACCTGAGTAACCTTGAAA+CGG | + | chr1_4:5457991-5458010 | Msa0145730:intron | 40.0% | |
| GTTGTTAGTCATCCGTTTCA+AGG | - | chr1_4:5458006-5458025 | None:intergenic | 40.0% | |
| ! | AGTGATGATGTTGGTGAAGT+TGG | + | chr1_4:5458151-5458170 | Msa0145730:CDS | 40.0% |
| TGCTGCTGAAACATTAGTTG+AGG | + | chr1_4:5458279-5458298 | Msa0145730:intron | 40.0% | |
| GTGTGCAAACAAGTCTTGAT+TGG | - | chr1_4:5458377-5458396 | None:intergenic | 40.0% | |
| TGTTTGCACACCATTCCAAT+TGG | + | chr1_4:5458386-5458405 | Msa0145730:CDS | 40.0% | |
| CCATGCTGTTCAATTCCAAT+TGG | - | chr1_4:5458404-5458423 | None:intergenic | 40.0% | |
| CCAATTGGAATTGAACAGCA+TGG | + | chr1_4:5458401-5458420 | Msa0145730:CDS | 40.0% | |
| TCCTGACTGGATGAACAATA+AGG | + | chr1_4:5458466-5458485 | Msa0145730:CDS | 40.0% | |
| TCCTTATTGTTCATCCAGTC+AGG | - | chr1_4:5458470-5458489 | None:intergenic | 40.0% | |
| TGTTAACTATGGCGTTCCAA+TGG | - | chr1_4:5458514-5458533 | None:intergenic | 40.0% | |
| TCAATGGAATGGGCATTAAC+TGG | + | chr1_4:5458543-5458562 | Msa0145730:CDS | 40.0% | |
| GACATGAAATCCATCTATGG+AGG | + | chr1_4:5458587-5458606 | Msa0145730:CDS | 40.0% | |
| TAAGTCCGGAATGGTATCAA+AGG | - | chr1_4:5458672-5458691 | None:intergenic | 40.0% | |
| !! | TTTTTGGCGTCTATCACGAT+TGG | + | chr1_4:5458969-5458988 | Msa0145730:CDS | 40.0% |
| TGCAGAAGGTCATAAGTTCT+TGG | - | chr1_4:5459016-5459035 | None:intergenic | 40.0% | |
| ACAAATGATCAGCATGCAGA+AGG | - | chr1_4:5459030-5459049 | None:intergenic | 40.0% | |
| ATCTCAACAACAATCGACAC+AGG | - | chr1_4:5459434-5459453 | None:intergenic | 40.0% | |
| !! | TGTGTCGATTGTTGTTGAGA+TGG | + | chr1_4:5459433-5459452 | Msa0145730:CDS | 40.0% |
| TTGAGATGGACCGTATCTTA+CGG | + | chr1_4:5459447-5459466 | Msa0145730:CDS | 40.0% | |
| GAAAGTCCTAAATGCATTGG+AGG | + | chr1_4:5459503-5459522 | Msa0145730:CDS | 40.0% | |
| GACTTTCTACCAGGAAAAAG+AGG | + | chr1_4:5459560-5459579 | Msa0145730:CDS | 40.0% | |
| AGTCGAGGGAAAGAATATCA+TGG | - | chr1_4:5459699-5459718 | None:intergenic | 40.0% | |
| TTGATTCACGTGTAAGTCGA+GGG | - | chr1_4:5459713-5459732 | None:intergenic | 40.0% | |
| ! | ATTGATTCACGTGTAAGTCG+AGG | - | chr1_4:5459714-5459733 | None:intergenic | 40.0% |
| !!! | GTTGGTCTTTTAGCTTGACG+AGG | - | chr1_4:5454690-5454709 | None:intergenic | 45.0% |
| CGTCAAGCTAAAAGACCAAC+TGG | + | chr1_4:5454690-5454709 | Msa0145730:CDS | 45.0% | |
| ATCTTCACCCATAACCCAGT+TGG | - | chr1_4:5454708-5454727 | None:intergenic | 45.0% | |
| GCGCCACTTCTTTCTTATGA+GGG | - | chr1_4:5454989-5455008 | None:intergenic | 45.0% | |
| GAAACGTGTGCATAAGAAGG+AGG | + | chr1_4:5455016-5455035 | Msa0145730:CDS | 45.0% | |
| TCAAGGGTCATTGGAGAAAG+AGG | + | chr1_4:5455061-5455080 | Msa0145730:CDS | 45.0% | |
| !! | TATCGAAGTAGGTGGTGGAA+AGG | + | chr1_4:5455331-5455350 | Msa0145730:CDS | 45.0% |
| !! | ATACACATGAAGGGCATCCT+TGG | - | chr1_4:5455386-5455405 | None:intergenic | 45.0% |
| AAGGATGCCCTTCATGTGTA+TGG | + | chr1_4:5455385-5455404 | Msa0145730:CDS | 45.0% | |
| GGAGACTCATAACCATCAAG+AGG | - | chr1_4:5455419-5455438 | None:intergenic | 45.0% | |
| ! | TTCAATTTGCTCTCAGGCCA+CGG | - | chr1_4:5455446-5455465 | None:intergenic | 45.0% |
| AGACTGTTTGCGAGAGCTAA+TGG | + | chr1_4:5455644-5455663 | Msa0145730:intron | 45.0% | |
| TTGTTTAGCCTACTAGGGTC+TGG | + | chr1_4:5455828-5455847 | Msa0145730:intron | 45.0% | |
| AATCCAAACCAGACCCTAGT+AGG | - | chr1_4:5455839-5455858 | None:intergenic | 45.0% | |
| TCCCTCCCAAAAATTCTGAC+TGG | - | chr1_4:5456287-5456306 | None:intergenic | 45.0% | |
| TCTGTGGCACTGTGATTTCT+AGG | + | chr1_4:5456487-5456506 | Msa0145730:intron | 45.0% | |
| AGATGGTACCAGACATTGAG+TGG | + | chr1_4:5456636-5456655 | Msa0145730:intron | 45.0% | |
| GATGGTACCAGACATTGAGT+GGG | + | chr1_4:5456637-5456656 | Msa0145730:intron | 45.0% | |
| ATGGTACCAGACATTGAGTG+GGG | + | chr1_4:5456638-5456657 | Msa0145730:CDS | 45.0% | |
| ATTCGTGTTGTCCTGGACAT+TGG | + | chr1_4:5456668-5456687 | Msa0145730:CDS | 45.0% | |
| TGGCTTGAAAGATGACCTAG+TGG | + | chr1_4:5456751-5456770 | Msa0145730:CDS | 45.0% | |
| GCAAAAGGGCTAACCAATGT+TGG | - | chr1_4:5456809-5456828 | None:intergenic | 45.0% | |
| !! | TGGTTAGCCCTTTTGCTAGA+AGG | + | chr1_4:5456813-5456832 | Msa0145730:CDS | 45.0% |
| GGAAGTCTCCTTCTAGCAAA+AGG | - | chr1_4:5456824-5456843 | None:intergenic | 45.0% | |
| AGCATACCTTGGCATTCCAA+TGG | + | chr1_4:5456887-5456906 | Msa0145730:CDS | 45.0% | |
| TTCAGGGGGTAAACTTCTAC+TGG | + | chr1_4:5457019-5457038 | Msa0145730:intron | 45.0% | |
| !! | AATCGGATTCTAAGACCTGG+TGG | + | chr1_4:5457047-5457066 | Msa0145730:CDS | 45.0% |
| ! | GACATGATGAAGTATCCACC+AGG | - | chr1_4:5457065-5457084 | None:intergenic | 45.0% |
| AACCAGGTGTATGTAAAGGG+TGG | + | chr1_4:5457291-5457310 | Msa0145730:intron | 45.0% | |
| TACCACCCTTTACATACACC+TGG | - | chr1_4:5457296-5457315 | None:intergenic | 45.0% | |
| ATAAGGACAAGAGAAACGCG+TGG | + | chr1_4:5457433-5457452 | Msa0145730:intron | 45.0% | |
| !! | CGGTTTTGTAGGGTTGAGTT+AGG | - | chr1_4:5457710-5457729 | None:intergenic | 45.0% |
| GTCATGCGTAACCATTCATG+GGG | - | chr1_4:5457817-5457836 | None:intergenic | 45.0% | |
| GAATGGTTACGCATGACTTG+AGG | + | chr1_4:5457820-5457839 | Msa0145730:intron | 45.0% | |
| ATGGTTACGCATGACTTGAG+GGG | + | chr1_4:5457822-5457841 | Msa0145730:intron | 45.0% | |
| TGACTTGAGGGGCTTGATAA+TGG | + | chr1_4:5457833-5457852 | Msa0145730:intron | 45.0% | |
| ! | GACTTGAGGGGCTTGATAAT+GGG | + | chr1_4:5457834-5457853 | Msa0145730:intron | 45.0% |
| GCCCACATAAAAACCTAAGC+TGG | - | chr1_4:5457872-5457891 | None:intergenic | 45.0% | |
| GTTCAGTCTTAGGCGAGATA+AGG | - | chr1_4:5457961-5457980 | None:intergenic | 45.0% | |
| CGCTTCAGATGTTCAGTCTT+AGG | - | chr1_4:5457971-5457990 | None:intergenic | 45.0% | |
| CATCCGTTTCAAGGTTACTC+AGG | - | chr1_4:5457997-5458016 | None:intergenic | 45.0% | |
| ACAAATAGAGGCTGTCAGTG+CGG | - | chr1_4:5458110-5458129 | None:intergenic | 45.0% | |
| CACTGACAGCCTCTATTTGT+TGG | + | chr1_4:5458110-5458129 | Msa0145730:CDS | 45.0% | |
| GGAAAAGTTTCGAGCCTCTT+CGG | - | chr1_4:5458449-5458468 | None:intergenic | 45.0% | |
| AACTATGGCGTTCCAATGGT+TGG | - | chr1_4:5458510-5458529 | None:intergenic | 45.0% | |
| ACGCCTCAAAAGCAGGTATT+CGG | + | chr1_4:5459054-5459073 | Msa0145730:intron | 45.0% | |
| !! | TTCCCGAATACCTGCTTTTG+AGG | - | chr1_4:5459060-5459079 | None:intergenic | 45.0% |
| TATCTCGATCACTTACGCAG+AGG | + | chr1_4:5459301-5459320 | Msa0145730:intron | 45.0% | |
| GTGCACAGAAAACTCTATGG+AGG | + | chr1_4:5459592-5459611 | Msa0145730:CDS | 45.0% | |
| GCGCCCTCATAAGAAAGAAG+TGG | + | chr1_4:5454983-5455002 | Msa0145730:CDS | 50.0% | |
| CGCGCCACTTCTTTCTTATG+AGG | - | chr1_4:5454990-5455009 | None:intergenic | 50.0% | |
| CATAAGAAAGAAGTGGCGCG+TGG | + | chr1_4:5454990-5455009 | Msa0145730:CDS | 50.0% | |
| GTGGCCTGAGAGCAAATTGA+AGG | + | chr1_4:5455445-5455464 | Msa0145730:CDS | 50.0% | |
| TAGCCTACTAGGGTCTGGTT+TGG | + | chr1_4:5455833-5455852 | Msa0145730:intron | 50.0% | |
| !! | CATCGTTGGTTGGTGGATTC+TGG | + | chr1_4:5456237-5456256 | Msa0145730:CDS | 50.0% |
| GCAGCTGCTCTCTTCGATAA+GGG | + | chr1_4:5456710-5456729 | Msa0145730:CDS | 50.0% | |
| CCACTTGAGCTAAGTCCACT+AGG | - | chr1_4:5456769-5456788 | None:intergenic | 50.0% | |
| !! | CCTAGTGGACTTAGCTCAAG+TGG | + | chr1_4:5456766-5456785 | Msa0145730:CDS | 50.0% |
| !! | TTGAGGGGCTTGATAATGGG+TGG | + | chr1_4:5457837-5457856 | Msa0145730:intron | 50.0% |
| GTGGCCTAATGTACCAGCTT+AGG | + | chr1_4:5457856-5457875 | Msa0145730:intron | 50.0% | |
| ATGAAAATCCCGACGCAGTC+TGG | + | chr1_4:5458254-5458273 | Msa0145730:CDS | 50.0% | |
| ! | GGCTCGAAACTTTTCCTGAC+TGG | + | chr1_4:5458453-5458472 | Msa0145730:CDS | 50.0% |
| TGTAGTACCTGTCCATGCAC+CGG | + | chr1_4:5458916-5458935 | Msa0145730:CDS | 50.0% | |
| ! | CACGATTGGTGCGAGTCTTT+TGG | + | chr1_4:5458983-5459002 | Msa0145730:CDS | 50.0% |
| TGTTCTCACGCCTCAAAAGC+AGG | + | chr1_4:5459047-5459066 | Msa0145730:CDS | 50.0% | |
| CGCCTCAAAAGCAGGTATTC+GGG | + | chr1_4:5459055-5459074 | Msa0145730:intron | 50.0% | |
| ! | ATCAAGTCATGGTGGGACTC+TGG | - | chr1_4:5459669-5459688 | None:intergenic | 50.0% |
| ! | GTGGTGGAAAGGTGCAGTAC+CGG | + | chr1_4:5455342-5455361 | Msa0145730:CDS | 55.0% |
| !! | AAAGGTGCAGTACCGGCACA+CGG | + | chr1_4:5455349-5455368 | Msa0145730:CDS | 55.0% |
| ACACGGAGAGGAGTTGTCCA+AGG | + | chr1_4:5455366-5455385 | Msa0145730:CDS | 55.0% | |
| CGCAGCTGCTCTCTTCGATA+AGG | + | chr1_4:5456709-5456728 | Msa0145730:CDS | 55.0% | |
| GTGCACGTTGCAGCATACCT+TGG | + | chr1_4:5456876-5456895 | Msa0145730:CDS | 55.0% | |
| CGTAACCATTCATGGGGCGT+CGG | - | chr1_4:5457811-5457830 | None:intergenic | 55.0% | |
| AGCAGCATACCAGACTGCGT+CGG | - | chr1_4:5458266-5458285 | None:intergenic | 55.0% | |
| TTGAACAGCATGGGGCAGAG+TGG | + | chr1_4:5458411-5458430 | Msa0145730:CDS | 55.0% | |
| TGATCGCGGACACCAACCAT+TGG | + | chr1_4:5458495-5458514 | Msa0145730:CDS | 55.0% | |
| GCTGGCATACCCTCCATAGA+TGG | - | chr1_4:5458600-5458619 | None:intergenic | 55.0% | |
| ATGGACCGTATCTTACGGCC+AGG | + | chr1_4:5459452-5459471 | Msa0145730:CDS | 55.0% | |
| ACCGTATCTTACGGCCAGGA+GGG | + | chr1_4:5459456-5459475 | Msa0145730:CDS | 55.0% | |
| ACCCTCCTGGCCGTAAGATA+CGG | - | chr1_4:5459460-5459479 | None:intergenic | 55.0% | |
| CGTATGATCGTCAACCCTCC+TGG | - | chr1_4:5459473-5459492 | None:intergenic | 55.0% | |
| GACAACTCCTCTCCGTGTGC+CGG | - | chr1_4:5455364-5455383 | None:intergenic | 60.0% | |
| ! | GTTATGAGTCTCCGGTGCCG+TGG | + | chr1_4:5455426-5455445 | Msa0145730:CDS | 60.0% |
| !! | AACCATTCATGGGGCGTCGG+AGG | - | chr1_4:5457808-5457827 | None:intergenic | 60.0% |
| AGAGGCTGTCAGTGCGGTCA+TGG | - | chr1_4:5458104-5458123 | None:intergenic | 60.0% | |
| GCAGCATACCAGACTGCGTC+GGG | - | chr1_4:5458265-5458284 | None:intergenic | 60.0% | |
| AGCCTCTTCGGCCATTCCTC+AGG | - | chr1_4:5458437-5458456 | None:intergenic | 60.0% | |
| AGCGTATCCGGTGCATGGAC+AGG | - | chr1_4:5458926-5458945 | None:intergenic | 60.0% | |
| ! | TGGGAAGCGTATCCGGTGCA+TGG | - | chr1_4:5458931-5458950 | None:intergenic | 60.0% |
| GACCGTATCTTACGGCCAGG+AGG | + | chr1_4:5459455-5459474 | Msa0145730:CDS | 60.0% | |
| !! | TGCAGTACCGGCACACGGAG+AGG | + | chr1_4:5455354-5455373 | Msa0145730:CDS | 65.0% |
| TTGCTCTCAGGCCACGGCAC+CGG | - | chr1_4:5455440-5455459 | None:intergenic | 65.0% | |
| GCTCAAGTGGCACTCGAGCG+CGG | + | chr1_4:5456779-5456798 | Msa0145730:CDS | 65.0% | |
| CGAGCGCGGCTTCCCAACAT+TGG | + | chr1_4:5456793-5456812 | Msa0145730:CDS | 65.0% | |
| CACCTCCGACGCCCCATGAA+TGG | + | chr1_4:5457803-5457822 | Msa0145730:intron | 65.0% | |
| GGGCAGAGTGGCCTGAGGAA+TGG | + | chr1_4:5458423-5458442 | Msa0145730:CDS | 65.0% | |
| GGCCTGAGGAATGGCCGAAG+AGG | + | chr1_4:5458432-5458451 | Msa0145730:CDS | 65.0% | |
| GCATGGGGCAGAGTGGCCTG+AGG | + | chr1_4:5458418-5458437 | Msa0145730:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 5454675 | 5459997 | 5454675 | ID=Msa0145730;Name=Msa0145730 |
| chr1_4 | mRNA | 5454675 | 5459997 | 5454675 | ID=Msa0145730-mRNA-1;Parent=Msa0145730;Name=Msa0145730-mRNA-1;_AED=0.09;_eAED=0.09;_QI=0|1|0.88|1|0.87|0.77|9|285|726 |
| chr1_4 | exon | 5454675 | 5455466 | 5454675 | ID=Msa0145730-mRNA-1:exon:2244;Parent=Msa0145730-mRNA-1 |
| chr1_4 | exon | 5456186 | 5456335 | 5456186 | ID=Msa0145730-mRNA-1:exon:2245;Parent=Msa0145730-mRNA-1 |
| chr1_4 | exon | 5456638 | 5456908 | 5456638 | ID=Msa0145730-mRNA-1:exon:2246;Parent=Msa0145730-mRNA-1 |
| chr1_4 | exon | 5457024 | 5457116 | 5457024 | ID=Msa0145730-mRNA-1:exon:2247;Parent=Msa0145730-mRNA-1 |
| chr1_4 | exon | 5458101 | 5458275 | 5458101 | ID=Msa0145730-mRNA-1:exon:2248;Parent=Msa0145730-mRNA-1 |
| chr1_4 | exon | 5458367 | 5458609 | 5458367 | ID=Msa0145730-mRNA-1:exon:2249;Parent=Msa0145730-mRNA-1 |
| chr1_4 | exon | 5458874 | 5459068 | 5458874 | ID=Msa0145730-mRNA-1:exon:2250;Parent=Msa0145730-mRNA-1 |
| chr1_4 | exon | 5459421 | 5459845 | 5459421 | ID=Msa0145730-mRNA-1:exon:2251;Parent=Msa0145730-mRNA-1 |
| chr1_4 | exon | 5459876 | 5459997 | 5459876 | ID=Msa0145730-mRNA-1:exon:2252;Parent=Msa0145730-mRNA-1 |
| chr1_4 | CDS | 5454675 | 5455466 | 5454675 | ID=Msa0145730-mRNA-1:cds;Parent=Msa0145730-mRNA-1 |
| chr1_4 | CDS | 5456186 | 5456335 | 5456186 | ID=Msa0145730-mRNA-1:cds;Parent=Msa0145730-mRNA-1 |
| chr1_4 | CDS | 5456638 | 5456908 | 5456638 | ID=Msa0145730-mRNA-1:cds;Parent=Msa0145730-mRNA-1 |
| chr1_4 | CDS | 5457024 | 5457116 | 5457024 | ID=Msa0145730-mRNA-1:cds;Parent=Msa0145730-mRNA-1 |
| chr1_4 | CDS | 5458101 | 5458275 | 5458101 | ID=Msa0145730-mRNA-1:cds;Parent=Msa0145730-mRNA-1 |
| chr1_4 | CDS | 5458367 | 5458609 | 5458367 | ID=Msa0145730-mRNA-1:cds;Parent=Msa0145730-mRNA-1 |
| chr1_4 | CDS | 5458874 | 5459068 | 5458874 | ID=Msa0145730-mRNA-1:cds;Parent=Msa0145730-mRNA-1 |
| chr1_4 | CDS | 5459421 | 5459682 | 5459421 | ID=Msa0145730-mRNA-1:cds;Parent=Msa0145730-mRNA-1 |
| chr1_4 | three_prime_UTR | 5459683 | 5459845 | 5459683 | ID=Msa0145730-mRNA-1:three_prime_utr;Parent=Msa0145730-mRNA-1 |
| chr1_4 | three_prime_UTR | 5459876 | 5459997 | 5459876 | ID=Msa0145730-mRNA-1:three_prime_utr;Parent=Msa0145730-mRNA-1 |
| Gene Sequence |
| Protein sequence |
