Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0812570 | XP_003615573.1 | 100.000 | 161 | 0 | 0 | 1 | 161 | 1 | 161 | 1.38e-114 | 331 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0812570 | G7KE40 | 100.000 | 161 | 0 | 0 | 1 | 161 | 1 | 161 | 6.59e-115 | 331 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004950 | Msa0812570 | 0.802343 | 5.867844e-49 | -8.615850e-47 |
| Msa0013050 | Msa0812570 | -0.819597 | 1.068569e-52 | -8.615850e-47 |
| Msa0016670 | Msa0812570 | 0.806757 | 7.043126e-50 | -8.615850e-47 |
| Msa0025730 | Msa0812570 | 0.828183 | 1.035569e-54 | -8.615850e-47 |
| Msa0027260 | Msa0812570 | 0.822793 | 1.958483e-53 | -8.615850e-47 |
| Msa0029270 | Msa0812570 | 0.809350 | 1.975779e-50 | -8.615850e-47 |
| Msa0030380 | Msa0812570 | 0.810714 | 1.004954e-50 | -8.615850e-47 |
| Msa0032580 | Msa0812570 | 0.854200 | 1.442002e-61 | -8.615850e-47 |
| Msa0040690 | Msa0812570 | 0.813594 | 2.364994e-51 | -8.615850e-47 |
| Msa0052770 | Msa0812570 | 0.815022 | 1.143783e-51 | -8.615850e-47 |
| Msa0058300 | Msa0812570 | 0.822972 | 1.778938e-53 | -8.615850e-47 |
| Msa0074320 | Msa0812570 | 0.806290 | 8.838425e-50 | -8.615850e-47 |
| Msa0076000 | Msa0812570 | 0.818596 | 1.804932e-52 | -8.615850e-47 |
| Msa0080200 | Msa0812570 | 0.828174 | 1.040908e-54 | -8.615850e-47 |
| Msa0083310 | Msa0812570 | 0.809796 | 1.584822e-50 | -8.615850e-47 |
| Msa0084940 | Msa0812570 | 0.800931 | 1.143044e-48 | -8.615850e-47 |
| Msa0091570 | Msa0812570 | 0.815513 | 8.897816e-52 | -8.615850e-47 |
| Msa0094470 | Msa0812570 | 0.813217 | 2.862012e-51 | -8.615850e-47 |
| Msa0115270 | Msa0812570 | 0.818028 | 2.427625e-52 | -8.615850e-47 |
| Msa0119850 | Msa0812570 | 0.801110 | 1.051034e-48 | -8.615850e-47 |
| Msa0607340 | Msa0812570 | -0.807682 | 4.485385e-50 | -8.615850e-47 |
| Msa0610430 | Msa0812570 | 0.835164 | 1.967539e-56 | -8.615850e-47 |
| Msa0615440 | Msa0812570 | 0.810171 | 1.316354e-50 | -8.615850e-47 |
| Msa0616020 | Msa0812570 | 0.803201 | 3.903808e-49 | -8.615850e-47 |
| Msa0616240 | Msa0812570 | 0.817889 | 2.609557e-52 | -8.615850e-47 |
| Msa0621120 | Msa0812570 | 0.814004 | 1.921267e-51 | -8.615850e-47 |
| Msa0623080 | Msa0812570 | 0.819390 | 1.191113e-52 | -8.615850e-47 |
| Msa0623700 | Msa0812570 | 0.823500 | 1.339389e-53 | -8.615850e-47 |
| Msa0632870 | Msa0812570 | 0.811963 | 5.382196e-51 | -8.615850e-47 |
| Msa0643560 | Msa0812570 | 0.815760 | 7.839316e-52 | -8.615850e-47 |
| Msa0647450 | Msa0812570 | -0.800160 | 1.641892e-48 | -8.615850e-47 |
| Msa0661190 | Msa0812570 | -0.810164 | 1.320478e-50 | -8.615850e-47 |
| Msa0677290 | Msa0812570 | 0.827265 | 1.720793e-54 | -8.615850e-47 |
| Msa0684180 | Msa0812570 | -0.805103 | 1.569278e-49 | -8.615850e-47 |
| Msa0688960 | Msa0812570 | 0.804465 | 2.132669e-49 | -8.615850e-47 |
| Msa0689010 | Msa0812570 | 0.812035 | 5.191348e-51 | -8.615850e-47 |
| Msa0692830 | Msa0812570 | 0.819558 | 1.090379e-52 | -8.615850e-47 |
| Msa0692950 | Msa0812570 | 0.805096 | 1.574134e-49 | -8.615850e-47 |
| Msa0698490 | Msa0812570 | 0.813423 | 2.579449e-51 | -8.615850e-47 |
| Msa0698660 | Msa0812570 | 0.818095 | 2.343427e-52 | -8.615850e-47 |
| Msa0699570 | Msa0812570 | 0.814662 | 1.374600e-51 | -8.615850e-47 |
| Msa0701280 | Msa0812570 | 0.806924 | 6.495945e-50 | -8.615850e-47 |
| Msa0701920 | Msa0812570 | 0.803351 | 3.633611e-49 | -8.615850e-47 |
| Msa0703230 | Msa0812570 | 0.800851 | 1.187319e-48 | -8.615850e-47 |
| Msa0709500 | Msa0812570 | 0.805538 | 1.271725e-49 | -8.615850e-47 |
| Msa0715700 | Msa0812570 | 0.811191 | 7.920452e-51 | -8.615850e-47 |
| Msa0716840 | Msa0812570 | 0.825245 | 5.208586e-54 | -8.615850e-47 |
| Msa0722020 | Msa0812570 | 0.811501 | 6.782543e-51 | -8.615850e-47 |
| Msa0733890 | Msa0812570 | 0.887397 | 1.478748e-72 | -8.615850e-47 |
| Msa0734660 | Msa0812570 | 0.814592 | 1.424128e-51 | -8.615850e-47 |
| Msa0743720 | Msa0812570 | 0.823867 | 1.099289e-53 | -8.615850e-47 |
| Msa0751070 | Msa0812570 | 0.804936 | 1.700549e-49 | -8.615850e-47 |
| Msa0763020 | Msa0812570 | 0.814608 | 1.412473e-51 | -8.615850e-47 |
| Msa0763070 | Msa0812570 | 0.817011 | 4.113845e-52 | -8.615850e-47 |
| Msa0771720 | Msa0812570 | 0.807695 | 4.457016e-50 | -8.615850e-47 |
| Msa0774540 | Msa0812570 | 0.809155 | 2.175996e-50 | -8.615850e-47 |
| Msa0776220 | Msa0812570 | 0.818396 | 2.003115e-52 | -8.615850e-47 |
| Msa0777050 | Msa0812570 | 0.818121 | 2.312865e-52 | -8.615850e-47 |
| Msa0784860 | Msa0812570 | 0.827907 | 1.206723e-54 | -8.615850e-47 |
| Msa0786270 | Msa0812570 | 0.809578 | 1.765434e-50 | -8.615850e-47 |
| Msa0787750 | Msa0812570 | 0.815429 | 9.287442e-52 | -8.615850e-47 |
| Msa0790660 | Msa0812570 | -0.802525 | 5.384395e-49 | -8.615850e-47 |
| Msa0790850 | Msa0812570 | 0.809984 | 1.443966e-50 | -8.615850e-47 |
| Msa0793800 | Msa0812570 | 0.818104 | 2.332705e-52 | -8.615850e-47 |
| Msa0795090 | Msa0812570 | 0.827419 | 1.580686e-54 | -8.615850e-47 |
| Msa0802410 | Msa0812570 | 0.801975 | 6.987262e-49 | -8.615850e-47 |
| Msa0805500 | Msa0812570 | 0.803352 | 3.631478e-49 | -8.615850e-47 |
| Msa0808080 | Msa0812570 | 0.809369 | 1.957557e-50 | -8.615850e-47 |
| Msa0808270 | Msa0812570 | 0.813356 | 2.668090e-51 | -8.615850e-47 |
| Msa0812570 | Msa0813670 | 0.808064 | 3.720953e-50 | -8.615850e-47 |
| Msa0812570 | Msa0813720 | 0.843004 | 1.828578e-58 | -8.615850e-47 |
| Msa0812570 | Msa0813740 | 0.834742 | 2.513985e-56 | -8.615850e-47 |
| Msa0812570 | Msa0823090 | 0.807050 | 6.108866e-50 | -8.615850e-47 |
| Msa0812570 | Msa0824680 | 0.820229 | 7.658464e-53 | -8.615850e-47 |
| Msa0812570 | Msa0827040 | 0.805770 | 1.137206e-49 | -8.615850e-47 |
| Msa0812570 | Msa0831580 | 0.838400 | 2.940649e-57 | -8.615850e-47 |
| Msa0812570 | Msa0831870 | 0.807168 | 5.766027e-50 | -8.615850e-47 |
| Msa0812570 | Msa0847080 | 0.814512 | 1.483408e-51 | -8.615850e-47 |
| Msa0812570 | Msa0849030 | 0.804747 | 1.861969e-49 | -8.615850e-47 |
| Msa0812570 | Msa0850960 | 0.844253 | 8.474553e-59 | -8.615850e-47 |
| Msa0812570 | Msa0852390 | 0.802864 | 4.583175e-49 | -8.615850e-47 |
| Msa0812570 | Msa0852860 | 0.816384 | 5.684588e-52 | -8.615850e-47 |
| Msa0812570 | Msa0863870 | 0.840530 | 8.228509e-58 | -8.615850e-47 |
| Msa0812570 | Msa0876200 | 0.801820 | 7.519301e-49 | -8.615850e-47 |
| Msa0812570 | Msa0900630 | 0.806269 | 8.930720e-50 | -8.615850e-47 |
| Msa0812570 | Msa0902760 | 0.814253 | 1.692893e-51 | -8.615850e-47 |
| Msa0812570 | Msa0926460 | 0.817066 | 3.997825e-52 | -8.615850e-47 |
| Msa0812570 | Msa0947660 | 0.803490 | 3.400787e-49 | -8.615850e-47 |
| Msa0812570 | Msa0965860 | 0.809039 | 2.304538e-50 | -8.615850e-47 |
| Msa0812570 | Msa0970030 | 0.816472 | 5.433828e-52 | -8.615850e-47 |
| Msa0812570 | Msa0970420 | 0.831314 | 1.790720e-55 | -8.615850e-47 |
| Msa0812570 | Msa0989540 | 0.811759 | 5.961888e-51 | -8.615850e-47 |
| Msa0812570 | Msa0993330 | 0.806088 | 9.749142e-50 | -8.615850e-47 |
| Msa0812570 | Msa0999970 | 0.810398 | 1.175947e-50 | -8.615850e-47 |
| Msa0812570 | Msa1003620 | 0.802046 | 6.755239e-49 | -8.615850e-47 |
| Msa0812570 | Msa1009820 | 0.813627 | 2.325953e-51 | -8.615850e-47 |
| Msa0812570 | Msa1013400 | 0.815317 | 9.837279e-52 | -8.615850e-47 |
| Msa0812570 | Msa1019260 | 0.802289 | 6.021394e-49 | -8.615850e-47 |
| Msa0812570 | Msa1019640 | 0.803925 | 2.762627e-49 | -8.615850e-47 |
| Msa0812570 | Msa1037420 | 0.821661 | 3.585384e-53 | -8.615850e-47 |
| Msa0812570 | Msa1039140 | 0.802959 | 4.379991e-49 | -8.615850e-47 |
| Msa0812570 | Msa1040400 | 0.800578 | 1.349761e-48 | -8.615850e-47 |
| Msa0812570 | Msa1046020 | 0.821912 | 3.136893e-53 | -8.615850e-47 |
| Msa0812570 | Msa1046060 | 0.825857 | 3.728174e-54 | -8.615850e-47 |
| Msa0812570 | Msa1046300 | 0.804006 | 2.656559e-49 | -8.615850e-47 |
| Msa0812570 | Msa1046460 | 0.801987 | 6.946270e-49 | -8.615850e-47 |
| Msa0812570 | Msa1051200 | 0.829651 | 4.568457e-55 | -8.615850e-47 |
| Msa0812570 | Msa1072460 | -0.806701 | 7.240644e-50 | -8.615850e-47 |
| Msa0812570 | Msa1073900 | 0.807238 | 5.573628e-50 | -8.615850e-47 |
| Msa0812570 | Msa1077030 | 0.801644 | 8.170833e-49 | -8.615850e-47 |
| Msa0812570 | Msa1081150 | 0.807816 | 4.202028e-50 | -8.615850e-47 |
| Msa0812570 | Msa1082700 | 0.801466 | 8.886992e-49 | -8.615850e-47 |
| Msa0812570 | Msa1084470 | 0.821310 | 4.322049e-53 | -8.615850e-47 |
| Msa0812570 | Msa1087710 | 0.823846 | 1.111514e-53 | -8.615850e-47 |
| Msa0812570 | Msa1089020 | 0.815930 | 7.183133e-52 | -8.615850e-47 |
| Msa0812570 | Msa1093530 | 0.813912 | 2.012467e-51 | -8.615850e-47 |
| Msa0812570 | Msa1094420 | 0.815475 | 9.071327e-52 | -8.615850e-47 |
| Msa0812570 | Msa1104140 | 0.824838 | 6.498292e-54 | -8.615850e-47 |
| Msa0812570 | Msa1104210 | 0.805992 | 1.021129e-49 | -8.615850e-47 |
| Msa0812570 | Msa1104370 | 0.807426 | 5.084340e-50 | -8.615850e-47 |
| Msa0812570 | Msa1106700 | 0.811050 | 8.496190e-51 | -8.615850e-47 |
| Msa0812570 | Msa1123810 | 0.800479 | 1.413917e-48 | -8.615850e-47 |
| Msa0812570 | Msa1125760 | 0.801368 | 9.304407e-49 | -8.615850e-47 |
| Msa0812570 | Msa1126510 | 0.806213 | 9.173161e-50 | -8.615850e-47 |
| Msa0812570 | Msa1136540 | 0.823552 | 1.302672e-53 | -8.615850e-47 |
| Msa0812570 | Msa1137700 | 0.829993 | 3.772002e-55 | -8.615850e-47 |
| Msa0812570 | Msa1138870 | 0.801100 | 1.056102e-48 | -8.615850e-47 |
| Msa0812570 | Msa1147900 | 0.800770 | 1.232967e-48 | -8.615850e-47 |
| Msa0812570 | Msa1166010 | 0.804119 | 2.517145e-49 | -8.615850e-47 |
| Msa0812570 | Msa1166860 | 0.806892 | 6.598103e-50 | -8.615850e-47 |
| Msa0812570 | Msa1171360 | 0.805385 | 1.369739e-49 | -8.615850e-47 |
| Msa0812570 | Msa1171870 | 0.816713 | 4.798335e-52 | -8.615850e-47 |
| Msa0812570 | Msa1173140 | 0.811106 | 8.264268e-51 | -8.615850e-47 |
| Msa0812570 | Msa1199220 | 0.813127 | 2.994977e-51 | -8.615850e-47 |
| Msa0812570 | Msa1203250 | 0.804764 | 1.847198e-49 | -8.615850e-47 |
| Msa0812570 | Msa1217830 | 0.805894 | 1.070912e-49 | -8.615850e-47 |
| Msa0812570 | Msa1218600 | 0.802254 | 6.122974e-49 | -8.615850e-47 |
| Msa0812570 | Msa1224810 | 0.802173 | 6.361559e-49 | -8.615850e-47 |
| Msa0812570 | Msa1237940 | 0.807952 | 3.930449e-50 | -8.615850e-47 |
| Msa0812570 | Msa1275360 | 0.808011 | 3.818079e-50 | -8.615850e-47 |
| Msa0812570 | Msa1306430 | 0.813458 | 2.533793e-51 | -8.615850e-47 |
| Msa0812570 | Msa1316830 | 0.807961 | 3.914088e-50 | -8.615850e-47 |
| Msa0812570 | Msa1336570 | 0.801546 | 8.556205e-49 | -8.615850e-47 |
| Msa0812570 | Msa1346370 | 0.804320 | 2.286332e-49 | -8.615850e-47 |
| Msa0812570 | Msa1348490 | 0.813088 | 3.055099e-51 | -8.615850e-47 |
| Msa0812570 | Msa1353330 | 0.803636 | 3.171319e-49 | -8.615850e-47 |
| Msa0812570 | Msa1356440 | 0.814793 | 1.285514e-51 | -8.615850e-47 |
| Msa0812570 | Msa1363330 | 0.804466 | 2.131654e-49 | -8.615850e-47 |
| Msa0812570 | Msa1369530 | 0.802221 | 6.217720e-49 | -8.615850e-47 |
| Msa0812570 | Msa1371430 | 0.804471 | 2.125815e-49 | -8.615850e-47 |
| Msa0812570 | Msa1379760 | 0.810192 | 1.302427e-50 | -8.615850e-47 |
| Msa0812570 | Msa1385100 | 0.812158 | 4.880296e-51 | -8.615850e-47 |
| Msa0812570 | Msa1385770 | 0.815409 | 9.381720e-52 | -8.615850e-47 |
| Msa0812570 | Msa1386600 | 0.804672 | 1.930169e-49 | -8.615850e-47 |
| Msa0812570 | Msa1386780 | 0.806653 | 7.411258e-50 | -8.615850e-47 |
| Msa0812570 | Msa1392200 | 0.809094 | 2.242194e-50 | -8.615850e-47 |
| Msa0812570 | Msa1394290 | 0.820190 | 7.816717e-53 | -8.615850e-47 |
| Msa0812570 | Msa1397810 | 0.828357 | 9.403965e-55 | -8.615850e-47 |
| Msa0812570 | Msa1403580 | -0.801888 | 7.279889e-49 | -8.615850e-47 |
| Msa0812570 | Msa1406040 | 0.800238 | 1.583154e-48 | -8.615850e-47 |
| Msa0812570 | Msa1409240 | 0.812745 | 3.633047e-51 | -8.615850e-47 |
| Msa0812570 | Msa1410100 | 0.804160 | 2.468371e-49 | -8.615850e-47 |
| Msa0812570 | Msa1416150 | 0.817709 | 2.864642e-52 | -8.615850e-47 |
| Msa0812570 | Msa1423350 | 0.805458 | 1.321852e-49 | -8.615850e-47 |
| Msa0812570 | Msa1426030 | 0.827587 | 1.440953e-54 | -8.615850e-47 |
| Msa0812570 | Msa1434140 | 0.813850 | 2.077253e-51 | -8.615850e-47 |
| Msa0812570 | Msa1444310 | 0.817401 | 3.362073e-52 | -8.615850e-47 |
| Msa0812570 | Msa1445100 | 0.802451 | 5.574493e-49 | -8.615850e-47 |
| Msa0812570 | Msa1453620 | 0.807948 | 3.937863e-50 | -8.615850e-47 |
| Msa0812570 | Msa1457920 | 0.801283 | 9.685420e-49 | -8.615850e-47 |
| Msa0812570 | Msa1460470 | 0.806549 | 7.794498e-50 | -8.615850e-47 |
| Msa0812570 | Msa1461490 | 0.827679 | 1.369032e-54 | -8.615850e-47 |
| Msa0812570 | Msa1466300 | 0.838413 | 2.919004e-57 | -8.615850e-47 |
| Msa0124340 | Msa0812570 | 0.806290 | 8.838626e-50 | -8.615850e-47 |
| Msa0127050 | Msa0812570 | 0.812884 | 3.386924e-51 | -8.615850e-47 |
| Msa0128860 | Msa0812570 | 0.804612 | 1.987469e-49 | -8.615850e-47 |
| Msa0137040 | Msa0812570 | 0.808844 | 2.536412e-50 | -8.615850e-47 |
| Msa0138630 | Msa0812570 | 0.802628 | 5.125902e-49 | -8.615850e-47 |
| Msa0145730 | Msa0812570 | 0.824576 | 7.490766e-54 | -8.615850e-47 |
| Msa0150820 | Msa0812570 | 0.810406 | 1.170996e-50 | -8.615850e-47 |
| Msa0160550 | Msa0812570 | 0.853703 | 2.005042e-61 | -8.615850e-47 |
| Msa0162770 | Msa0812570 | -0.805659 | 1.199509e-49 | -8.615850e-47 |
| Msa0172970 | Msa0812570 | 0.851139 | 1.078238e-60 | -8.615850e-47 |
| Msa0173740 | Msa0812570 | 0.815435 | 9.257922e-52 | -8.615850e-47 |
| Msa0173820 | Msa0812570 | 0.813601 | 2.356359e-51 | -8.615850e-47 |
| Msa0174730 | Msa0812570 | 0.803784 | 2.955287e-49 | -8.615850e-47 |
| Msa0187070 | Msa0812570 | 0.834718 | 2.549560e-56 | -8.615850e-47 |
| Msa0187120 | Msa0812570 | 0.811717 | 6.087087e-51 | -8.615850e-47 |
| Msa0187690 | Msa0812570 | 0.801957 | 7.044786e-49 | -8.615850e-47 |
| Msa0192060 | Msa0812570 | 0.806258 | 8.974878e-50 | -8.615850e-47 |
| Msa0193120 | Msa0812570 | 0.804689 | 1.915249e-49 | -8.615850e-47 |
| Msa0194540 | Msa0812570 | 0.806115 | 9.622223e-50 | -8.615850e-47 |
| Msa0195460 | Msa0812570 | 0.802445 | 5.591857e-49 | -8.615850e-47 |
| Msa0199690 | Msa0812570 | 0.819338 | 1.223692e-52 | -8.615850e-47 |
| Msa0208220 | Msa0812570 | 0.804321 | 2.284518e-49 | -8.615850e-47 |
| Msa0208350 | Msa0812570 | 0.813656 | 2.292126e-51 | -8.615850e-47 |
| Msa0220720 | Msa0812570 | 0.837875 | 4.015934e-57 | -8.615850e-47 |
| Msa0227400 | Msa0812570 | 0.811052 | 8.490979e-51 | -8.615850e-47 |
| Msa0228070 | Msa0812570 | 0.832327 | 1.006847e-55 | -8.615850e-47 |
| Msa0231880 | Msa0812570 | 0.801181 | 1.016435e-48 | -8.615850e-47 |
| Msa0236270 | Msa0812570 | 0.807099 | 5.964246e-50 | -8.615850e-47 |
| Msa0238250 | Msa0812570 | -0.800863 | 1.180329e-48 | -8.615850e-47 |
| Msa0369050 | Msa0812570 | 0.804306 | 2.301834e-49 | -8.615850e-47 |
| Msa0369220 | Msa0812570 | 0.841122 | 5.754203e-58 | -8.615850e-47 |
| Msa0372340 | Msa0812570 | 0.832038 | 1.186966e-55 | -8.615850e-47 |
| Msa0380040 | Msa0812570 | 0.806058 | 9.892178e-50 | -8.615850e-47 |
| Msa0383500 | Msa0812570 | 0.806668 | 7.356170e-50 | -8.615850e-47 |
| Msa0385580 | Msa0812570 | 0.831679 | 1.455887e-55 | -8.615850e-47 |
| Msa0388050 | Msa0812570 | 0.812801 | 3.531599e-51 | -8.615850e-47 |
| Msa0398950 | Msa0812570 | 0.831830 | 1.336168e-55 | -8.615850e-47 |
| Msa0402330 | Msa0812570 | 0.817716 | 2.854604e-52 | -8.615850e-47 |
| Msa0419820 | Msa0812570 | 0.810499 | 1.117971e-50 | -8.615850e-47 |
| Msa0421780 | Msa0812570 | -0.811562 | 6.579048e-51 | -8.615850e-47 |
| Msa0429290 | Msa0812570 | 0.806392 | 8.412805e-50 | -8.615850e-47 |
| Msa0432770 | Msa0812570 | 0.801556 | 8.515397e-49 | -8.615850e-47 |
| Msa0436280 | Msa0812570 | -0.800762 | 1.237625e-48 | -8.615850e-47 |
| Msa0443500 | Msa0812570 | 0.802006 | 6.884227e-49 | -8.615850e-47 |
| Msa0453230 | Msa0812570 | 0.813102 | 3.033033e-51 | -8.615850e-47 |
| Msa0458060 | Msa0812570 | 0.802143 | 6.453376e-49 | -8.615850e-47 |
| Msa0465790 | Msa0812570 | 0.815401 | 9.421443e-52 | -8.615850e-47 |
| Msa0467900 | Msa0812570 | -0.808000 | 3.839407e-50 | -8.615850e-47 |
| Msa0241640 | Msa0812570 | 0.812739 | 3.643830e-51 | -8.615850e-47 |
| Msa0244270 | Msa0812570 | 0.806062 | 9.870695e-50 | -8.615850e-47 |
| Msa0255080 | Msa0812570 | 0.811681 | 6.199394e-51 | -8.615850e-47 |
| Msa0262050 | Msa0812570 | 0.807673 | 4.506131e-50 | -8.615850e-47 |
| Msa0262310 | Msa0812570 | 0.836023 | 1.192748e-56 | -8.615850e-47 |
| Msa0262340 | Msa0812570 | 0.803554 | 3.297659e-49 | -8.615850e-47 |
| Msa0264150 | Msa0812570 | 0.801552 | 8.533991e-49 | -8.615850e-47 |
| Msa0264570 | Msa0812570 | 0.803948 | 2.732479e-49 | -8.615850e-47 |
| Msa0265520 | Msa0812570 | 0.821186 | 4.616751e-53 | -8.615850e-47 |
| Msa0268130 | Msa0812570 | 0.806466 | 8.113866e-50 | -8.615850e-47 |
| Msa0279790 | Msa0812570 | 0.827946 | 1.181068e-54 | -8.615850e-47 |
| Msa0280430 | Msa0812570 | 0.818687 | 1.721583e-52 | -8.615850e-47 |
| Msa0294560 | Msa0812570 | -0.804532 | 2.064367e-49 | -8.615850e-47 |
| Msa0298700 | Msa0812570 | 0.804583 | 2.014953e-49 | -8.615850e-47 |
| Msa0298990 | Msa0812570 | 0.802737 | 4.867456e-49 | -8.615850e-47 |
| Msa0299870 | Msa0812570 | 0.830284 | 3.202953e-55 | -8.615850e-47 |
| Msa0303380 | Msa0812570 | 0.803051 | 4.191914e-49 | -8.615850e-47 |
| Msa0306710 | Msa0812570 | 0.802737 | 4.868461e-49 | -8.615850e-47 |
| Msa0317250 | Msa0812570 | 0.807756 | 4.326155e-50 | -8.615850e-47 |
| Msa0320100 | Msa0812570 | 0.810086 | 1.372691e-50 | -8.615850e-47 |
| Msa0332920 | Msa0812570 | 0.801104 | 1.053904e-48 | -8.615850e-47 |
| Msa0333030 | Msa0812570 | 0.807377 | 5.208656e-50 | -8.615850e-47 |
| Msa0337240 | Msa0812570 | 0.834388 | 3.084786e-56 | -8.615850e-47 |
| Msa0337620 | Msa0812570 | 0.828689 | 7.820759e-55 | -8.615850e-47 |
| Msa0337650 | Msa0812570 | 0.834935 | 2.247170e-56 | -8.615850e-47 |
| Msa0350990 | Msa0812570 | 0.802258 | 6.110106e-49 | -8.615850e-47 |
| Msa0351030 | Msa0812570 | 0.804622 | 1.977226e-49 | -8.615850e-47 |
| Msa0351080 | Msa0812570 | 0.832810 | 7.644226e-56 | -8.615850e-47 |
| Msa0351100 | Msa0812570 | 0.803533 | 3.332190e-49 | -8.615850e-47 |
| Msa0355270 | Msa0812570 | 0.813154 | 2.954533e-51 | -8.615850e-47 |
| Msa0358170 | Msa0812570 | 0.830795 | 2.401679e-55 | -8.615850e-47 |
| Msa0360990 | Msa0812570 | 0.831800 | 1.358978e-55 | -8.615850e-47 |
| Msa0498650 | Msa0812570 | 0.803704 | 3.070572e-49 | -8.615850e-47 |
| Msa0504020 | Msa0812570 | 0.807454 | 5.015284e-50 | -8.615850e-47 |
| Msa0508590 | Msa0812570 | 0.810635 | 1.045313e-50 | -8.615850e-47 |
| Msa0508870 | Msa0812570 | 0.838527 | 2.728201e-57 | -8.615850e-47 |
| Msa0509390 | Msa0812570 | 0.802880 | 4.546918e-49 | -8.615850e-47 |
| Msa0510350 | Msa0812570 | 0.811837 | 5.733095e-51 | -8.615850e-47 |
| Msa0512750 | Msa0812570 | 0.812285 | 4.578518e-51 | -8.615850e-47 |
| Msa0519220 | Msa0812570 | 0.807274 | 5.475787e-50 | -8.615850e-47 |
| Msa0521880 | Msa0812570 | 0.809445 | 1.885286e-50 | -8.615850e-47 |
| Msa0526540 | Msa0812570 | 0.803181 | 3.940004e-49 | -8.615850e-47 |
| Msa0529040 | Msa0812570 | 0.803875 | 2.829630e-49 | -8.615850e-47 |
| Msa0541860 | Msa0812570 | 0.800951 | 1.132316e-48 | -8.615850e-47 |
| Msa0546360 | Msa0812570 | 0.809528 | 1.809611e-50 | -8.615850e-47 |
| Msa0547320 | Msa0812570 | 0.805149 | 1.534649e-49 | -8.615850e-47 |
| Msa0553220 | Msa0812570 | -0.815627 | 8.389636e-52 | -8.615850e-47 |
| Msa0555450 | Msa0812570 | 0.800867 | 1.178232e-48 | -8.615850e-47 |
| Msa0562440 | Msa0812570 | 0.800223 | 1.594242e-48 | -8.615850e-47 |
| Msa0576940 | Msa0812570 | 0.805415 | 1.349896e-49 | -8.615850e-47 |
| Msa0579290 | Msa0812570 | 0.804723 | 1.883755e-49 | -8.615850e-47 |
| Msa0579390 | Msa0812570 | 0.802894 | 4.517691e-49 | -8.615850e-47 |
| Msa0591060 | Msa0812570 | 0.805096 | 1.573881e-49 | -8.615850e-47 |
| Msa0593650 | Msa0812570 | 0.806342 | 8.616972e-50 | -8.615850e-47 |
| Msa0598810 | Msa0812570 | 0.801065 | 1.073181e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0812570 | MtrunA17_Chr5g0429501 | 100.000 | 161 | 0 | 0 | 1 | 161 | 1 | 161 | 1.27e-118 | 331 |
| Msa0812570 | MtrunA17_Chr3g0104001 | 46.012 | 163 | 70 | 5 | 4 | 160 | 4 | 154 | 2.30e-41 | 135 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0812570 | AT5G58920.1 | 63.636 | 165 | 52 | 2 | 1 | 160 | 1 | 162 | 2.33e-74 | 220 |
Find 70 sgRNAs with CRISPR-Local
Find 198 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATGGAGGAGTTTATTAAAA+AGG | 0.222603 | 5_3:-42715834 | Msa0812570:CDS |
| TTTAACAAATGTACCTGTTT+TGG | 0.232762 | 5_3:+42716205 | None:intergenic |
| TTTGTGCTTTCTTGTGTATC+AGG | 0.248485 | 5_3:-42715421 | Msa0812570:three_prime_UTR |
| GCTTCCTCGTCTCCTGGATA+TGG | 0.282324 | 5_3:+42715857 | None:intergenic |
| AGTGCTTCTGCAAAGGAAAA+TGG | 0.305320 | 5_3:+42716521 | None:intergenic |
| TGAAGTTATTGGTGAGCTTC+AGG | 0.305838 | 5_3:-42715678 | Msa0812570:CDS |
| TCATTCTCCACCATCCCTTT+AGG | 0.312626 | 5_3:+42715785 | None:intergenic |
| GAGATTCCGATGAATGAATA+TGG | 0.334327 | 5_3:+42716282 | None:intergenic |
| ACTAATATATTTGTTGTTCT+CGG | 0.348802 | 5_3:-42715521 | Msa0812570:three_prime_UTR |
| AGGGATGGTGGAGAATGATA+TGG | 0.349759 | 5_3:-42715780 | Msa0812570:CDS |
| TTCCAGAAGTAGTAGTTATT+CGG | 0.356863 | 5_3:+42716028 | None:intergenic |
| GACCGAATAACTACTACTTC+TGG | 0.360457 | 5_3:-42716030 | Msa0812570:CDS |
| TGATTATAAGAAGGAGCTTA+AGG | 0.365177 | 5_3:-42715750 | Msa0812570:CDS |
| TCCAGCTCTTTCTCTTCCTT+CGG | 0.366817 | 5_3:+42715905 | None:intergenic |
| AGCAAGAGGCTCAGAAGCTT+TGG | 0.366979 | 5_3:-42715715 | Msa0812570:CDS |
| AGGCTCAGAAGCTTTGGTTT+AGG | 0.390308 | 5_3:-42715709 | Msa0812570:CDS |
| CTACTACTTCTGGAAACAAA+TGG | 0.394820 | 5_3:-42716020 | Msa0812570:CDS |
| TACTACTTCTGGAAACAAAT+GGG | 0.395334 | 5_3:-42716019 | Msa0812570:CDS |
| TGTTAAGCGCACCTGGGATT+GGG | 0.396887 | 5_3:+42716452 | None:intergenic |
| GGGATGATTGGAACAACTAT+TGG | 0.398836 | 5_3:-42715809 | Msa0812570:CDS |
| TCCATAGCTTCCTCGTCTCC+TGG | 0.401637 | 5_3:+42715851 | None:intergenic |
| TCTTTCTCTTCCTTCGGCAT+TGG | 0.403880 | 5_3:+42715911 | None:intergenic |
| AGGATGAGGAATGAAGTTAT+TGG | 0.417045 | 5_3:-42715689 | Msa0812570:CDS |
| GAAACAAATGGGGAAGGCTT+TGG | 0.427981 | 5_3:-42716008 | Msa0812570:CDS |
| TTGAATCGAATCCTTAAAGT+TGG | 0.431687 | 5_3:-42715624 | Msa0812570:three_prime_UTR |
| TTTCTAAAGAAAATAGGGTT+GGG | 0.438410 | 5_3:-42716052 | Msa0812570:CDS |
| TGAATCGAATCCTTAAAGTT+GGG | 0.445885 | 5_3:-42715623 | Msa0812570:three_prime_UTR |
| TTGTTAAGCGCACCTGGGAT+TGG | 0.454395 | 5_3:+42716451 | None:intergenic |
| GAAACACCGCAACCCAAAAC+AGG | 0.459747 | 5_3:-42716218 | Msa0812570:intron |
| AGAAGCTTTGGTTTAGGATG+AGG | 0.464134 | 5_3:-42715703 | Msa0812570:CDS |
| GGAACAACTATTGGACCTAA+AGG | 0.464559 | 5_3:-42715800 | Msa0812570:CDS |
| TTGTGCTTTCTTGTGTATCA+GGG | 0.472024 | 5_3:-42715420 | Msa0812570:three_prime_UTR |
| TTCAACGAGACGTCGCCATT+GGG | 0.472078 | 5_3:-42715950 | Msa0812570:CDS |
| TTTCACTCATTCCCAATCCC+AGG | 0.473777 | 5_3:-42716463 | Msa0812570:intron |
| ATTCAACGAGACGTCGCCAT+TGG | 0.476874 | 5_3:-42715951 | Msa0812570:CDS |
| GAACAACTATTGGACCTAAA+GGG | 0.484376 | 5_3:-42715799 | Msa0812570:CDS |
| CGGCGTGAGTTTCCATATCC+AGG | 0.484424 | 5_3:-42715869 | Msa0812570:CDS |
| GGATAAGAAGTTTGAGCAAG+AGG | 0.490071 | 5_3:-42715729 | Msa0812570:CDS |
| TTAAAATACTACATTTGTGT+TGG | 0.495464 | 5_3:-42715598 | Msa0812570:three_prime_UTR |
| ATCGTTCCATATTCATTCAT+CGG | 0.498255 | 5_3:-42716288 | Msa0812570:five_prime_UTR |
| TATTGGTGAGCTTCAGGAGA+AGG | 0.502673 | 5_3:-42715672 | Msa0812570:CDS |
| TCCAGGAGACGAGGAAGCTA+TGG | 0.505414 | 5_3:-42715852 | Msa0812570:CDS |
| TTTGTTGTTCTCGGATAATG+AGG | 0.506445 | 5_3:-42715512 | Msa0812570:three_prime_UTR |
| GGCGTGCACTTATGCAGTGA+TGG | 0.519711 | 5_3:-42715987 | Msa0812570:CDS |
| AGACGTCGCCATTGGGTTGG+TGG | 0.529186 | 5_3:-42715943 | Msa0812570:CDS |
| GAATCGAATCCTTAAAGTTG+GGG | 0.531721 | 5_3:-42715622 | Msa0812570:three_prime_UTR |
| GGATGAGAGTGATTATAAGA+AGG | 0.532632 | 5_3:-42715759 | Msa0812570:CDS |
| GCCGAAGGAAGAGAAAGAGC+TGG | 0.546418 | 5_3:-42715906 | Msa0812570:CDS |
| ATTGGTGAGCTTCAGGAGAA+GGG | 0.553628 | 5_3:-42715671 | Msa0812570:CDS |
| CTCGACAAGTGCTTCTGCAA+AGG | 0.569134 | 5_3:+42716514 | None:intergenic |
| AGGAGACGAGGAAGCTATGG+AGG | 0.571758 | 5_3:-42715849 | Msa0812570:CDS |
| GCGTGCACTTATGCAGTGAT+GGG | 0.574227 | 5_3:-42715986 | Msa0812570:CDS |
| ACGAGACGTCGCCATTGGGT+TGG | 0.576055 | 5_3:-42715946 | Msa0812570:CDS |
| AGCTGGAACATTTGTATCAG+CGG | 0.579371 | 5_3:-42715889 | Msa0812570:CDS |
| GACGTTGAAGCCAATGCCGA+AGG | 0.592265 | 5_3:-42715921 | Msa0812570:CDS |
| TGCTTTCTTGTGTATCAGGG+TGG | 0.595157 | 5_3:-42715417 | Msa0812570:three_prime_UTR |
| GAATGAATATGGAACGATGA+TGG | 0.599659 | 5_3:+42716293 | None:intergenic |
| GTTTCGAAGAAGCGTTTACG+AGG | 0.608927 | 5_3:+42716236 | None:intergenic |
| AACTATTGGACCTAAAGGGA+TGG | 0.616902 | 5_3:-42715795 | Msa0812570:CDS |
| CACTTATGCAGTGATGGGTG+CGG | 0.618073 | 5_3:-42715981 | Msa0812570:CDS |
| TATTGGACCTAAAGGGATGG+TGG | 0.625420 | 5_3:-42715792 | Msa0812570:CDS |
| TTCAACGTCCACCAACCCAA+TGG | 0.629360 | 5_3:+42715935 | None:intergenic |
| CTTCTGGAAACAAATGGGGA+AGG | 0.632900 | 5_3:-42716014 | Msa0812570:CDS |
| ACTACTTCTGGAAACAAATG+GGG | 0.649071 | 5_3:-42716018 | Msa0812570:CDS |
| AGATAGTGGACTATATGACA+AGG | 0.662949 | 5_3:-42715370 | None:intergenic |
| CAAAGAAGCCAAATCCGATG+AGG | 0.685781 | 5_3:+42715440 | None:intergenic |
| GTTTCCATATCCAGGAGACG+AGG | 0.689791 | 5_3:-42715861 | Msa0812570:CDS |
| AACAGCATGTGCGATCCTCG+TGG | 0.694988 | 5_3:-42716565 | Msa0812570:five_prime_UTR |
| ATGCAGTGATGGGTGCGGCG+TGG | 0.699663 | 5_3:-42715976 | Msa0812570:CDS |
| ATAATATGAAGATTGCCACG+AGG | 0.795185 | 5_3:+42716550 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CATAAAATGTAAAAAATTAT+TGG | + | chr5_3:42715821-42715840 | None:intergenic | 10.0% |
| !!! | TATTTTCTTTAGAAAATATT+GGG | + | chr5_3:42715880-42715899 | None:intergenic | 10.0% |
| !!! | AATATTTTCTAAAGAAAATA+GGG | - | chr5_3:42715880-42715899 | Msa0812570:CDS | 10.0% |
| !! | CATAAAATGTAAAAAATTAT+TGG | + | chr5_3:42715821-42715840 | None:intergenic | 10.0% |
| !!! | TATTTTCTTTAGAAAATATT+GGG | + | chr5_3:42715880-42715899 | None:intergenic | 10.0% |
| !!! | AATATTTTCTAAAGAAAATA+GGG | - | chr5_3:42715880-42715899 | Msa0812570:CDS | 10.0% |
| !!! | CTATTTTCTTTAGAAAATAT+TGG | + | chr5_3:42715881-42715900 | None:intergenic | 15.0% |
| !!! | CAATATTTTCTAAAGAAAAT+AGG | - | chr5_3:42715879-42715898 | Msa0812570:CDS | 15.0% |
| !!! | CTATTTTCTTTAGAAAATAT+TGG | + | chr5_3:42715881-42715900 | None:intergenic | 15.0% |
| !!! | CAATATTTTCTAAAGAAAAT+AGG | - | chr5_3:42715879-42715898 | Msa0812570:CDS | 15.0% |
| !!! | TAAGATTCAATTTGAAGTTA+GGG | + | chr5_3:42715606-42715625 | None:intergenic | 20.0% |
| !!! | ATAAGATTCAATTTGAAGTT+AGG | + | chr5_3:42715607-42715626 | None:intergenic | 20.0% |
| !! | TTAAAATACTACATTTGTGT+TGG | - | chr5_3:42716339-42716358 | Msa0812570:intron | 20.0% |
| !!! | TTTTAATAAATCACAGTAGA+CGG | - | chr5_3:42716388-42716407 | Msa0812570:intron | 20.0% |
| !!! | ACTAATATATTTGTTGTTCT+CGG | - | chr5_3:42716416-42716435 | Msa0812570:intron | 20.0% |
| !!! | TAAGATTCAATTTGAAGTTA+GGG | + | chr5_3:42715606-42715625 | None:intergenic | 20.0% |
| !!! | ATAAGATTCAATTTGAAGTT+AGG | + | chr5_3:42715607-42715626 | None:intergenic | 20.0% |
| !! | TTAAAATACTACATTTGTGT+TGG | - | chr5_3:42716339-42716358 | Msa0812570:intron | 20.0% |
| !!! | TTTTAATAAATCACAGTAGA+CGG | - | chr5_3:42716388-42716407 | Msa0812570:intron | 20.0% |
| !!! | ACTAATATATTTGTTGTTCT+CGG | - | chr5_3:42716416-42716435 | Msa0812570:intron | 20.0% |
| !! | TTAACAAATGTACCTGTTTT+GGG | + | chr5_3:42715734-42715753 | None:intergenic | 25.0% |
| !! | TTTAACAAATGTACCTGTTT+TGG | + | chr5_3:42715735-42715754 | None:intergenic | 25.0% |
| !! | AATTTTATGCATCTTAATGC+AGG | - | chr5_3:42715843-42715862 | Msa0812570:CDS | 25.0% |
| !!! | TTTTCTAAAGAAAATAGGGT+TGG | - | chr5_3:42715884-42715903 | Msa0812570:CDS | 25.0% |
| !! | TTTCTAAAGAAAATAGGGTT+GGG | - | chr5_3:42715885-42715904 | Msa0812570:CDS | 25.0% |
| ! | TATGGAGGAGTTTATTAAAA+AGG | - | chr5_3:42716103-42716122 | Msa0812570:intron | 25.0% |
| ! | ATGGAGGAGTTTATTAAAAA+GGG | - | chr5_3:42716104-42716123 | Msa0812570:intron | 25.0% |
| !!! | TATTTTAATCCCCAACTTTA+AGG | + | chr5_3:42716327-42716346 | None:intergenic | 25.0% |
| !! | TTAACAAATGTACCTGTTTT+GGG | + | chr5_3:42715734-42715753 | None:intergenic | 25.0% |
| !! | TTTAACAAATGTACCTGTTT+TGG | + | chr5_3:42715735-42715754 | None:intergenic | 25.0% |
| !! | AATTTTATGCATCTTAATGC+AGG | - | chr5_3:42715843-42715862 | Msa0812570:CDS | 25.0% |
| !!! | TTTTCTAAAGAAAATAGGGT+TGG | - | chr5_3:42715884-42715903 | Msa0812570:CDS | 25.0% |
| !! | TTTCTAAAGAAAATAGGGTT+GGG | - | chr5_3:42715885-42715904 | Msa0812570:CDS | 25.0% |
| ! | TATGGAGGAGTTTATTAAAA+AGG | - | chr5_3:42716103-42716122 | Msa0812570:intron | 25.0% |
| ! | ATGGAGGAGTTTATTAAAAA+GGG | - | chr5_3:42716104-42716123 | Msa0812570:intron | 25.0% |
| !!! | TATTTTAATCCCCAACTTTA+AGG | + | chr5_3:42716327-42716346 | None:intergenic | 25.0% |
| TTGGGAATGAGTGAAAAAAA+AGG | + | chr5_3:42715470-42715489 | None:intergenic | 30.0% | |
| ATCGTTCCATATTCATTCAT+CGG | - | chr5_3:42715649-42715668 | Msa0812570:exon | 30.0% | |
| TGTGTAATAGTGAGTGTTAA+TGG | + | chr5_3:42715758-42715777 | None:intergenic | 30.0% | |
| TTCCAGAAGTAGTAGTTATT+CGG | + | chr5_3:42715912-42715931 | None:intergenic | 30.0% | |
| ! | TACTACTTCTGGAAACAAAT+GGG | - | chr5_3:42715918-42715937 | Msa0812570:CDS | 30.0% |
| TGGAGGAGTTTATTAAAAAG+GGG | - | chr5_3:42716105-42716124 | Msa0812570:intron | 30.0% | |
| TGATTATAAGAAGGAGCTTA+AGG | - | chr5_3:42716187-42716206 | Msa0812570:intron | 30.0% | |
| TTGAATCGAATCCTTAAAGT+TGG | - | chr5_3:42716313-42716332 | Msa0812570:intron | 30.0% | |
| TGAATCGAATCCTTAAAGTT+GGG | - | chr5_3:42716314-42716333 | Msa0812570:intron | 30.0% | |
| !!! | TGTCACATTTTTTTCCTCAT+CGG | - | chr5_3:42716483-42716502 | Msa0812570:five_prime_UTR | 30.0% |
| !!! | ATTTTTTTCCTCATCGGATT+TGG | - | chr5_3:42716489-42716508 | Msa0812570:five_prime_UTR | 30.0% |
| !!! | GAGCAATGATTTTAAGATAG+TGG | - | chr5_3:42716553-42716572 | Msa0812570:five_prime_UTR | 30.0% |
| TTGGGAATGAGTGAAAAAAA+AGG | + | chr5_3:42715470-42715489 | None:intergenic | 30.0% | |
| ATCGTTCCATATTCATTCAT+CGG | - | chr5_3:42715649-42715668 | Msa0812570:exon | 30.0% | |
| TGTGTAATAGTGAGTGTTAA+TGG | + | chr5_3:42715758-42715777 | None:intergenic | 30.0% | |
| TTCCAGAAGTAGTAGTTATT+CGG | + | chr5_3:42715912-42715931 | None:intergenic | 30.0% | |
| ! | TACTACTTCTGGAAACAAAT+GGG | - | chr5_3:42715918-42715937 | Msa0812570:CDS | 30.0% |
| TGGAGGAGTTTATTAAAAAG+GGG | - | chr5_3:42716105-42716124 | Msa0812570:intron | 30.0% | |
| TGATTATAAGAAGGAGCTTA+AGG | - | chr5_3:42716187-42716206 | Msa0812570:intron | 30.0% | |
| TTGAATCGAATCCTTAAAGT+TGG | - | chr5_3:42716313-42716332 | Msa0812570:intron | 30.0% | |
| TGAATCGAATCCTTAAAGTT+GGG | - | chr5_3:42716314-42716333 | Msa0812570:intron | 30.0% | |
| !!! | TGTCACATTTTTTTCCTCAT+CGG | - | chr5_3:42716483-42716502 | Msa0812570:five_prime_UTR | 30.0% |
| !!! | ATTTTTTTCCTCATCGGATT+TGG | - | chr5_3:42716489-42716508 | Msa0812570:five_prime_UTR | 30.0% |
| !!! | GAGCAATGATTTTAAGATAG+TGG | - | chr5_3:42716553-42716572 | Msa0812570:five_prime_UTR | 30.0% |
| ATAATATGAAGATTGCCACG+AGG | + | chr5_3:42715390-42715409 | None:intergenic | 35.0% | |
| AAAAAGGCGAGAAAGAAAGT+TGG | + | chr5_3:42715454-42715473 | None:intergenic | 35.0% | |
| !! | GATGATGGTATTTTACTGCA+GGG | + | chr5_3:42715632-42715651 | None:intergenic | 35.0% |
| GAATGAATATGGAACGATGA+TGG | + | chr5_3:42715647-42715666 | None:intergenic | 35.0% | |
| GAGATTCCGATGAATGAATA+TGG | + | chr5_3:42715658-42715677 | None:intergenic | 35.0% | |
| ACAATCTAACATTGCACACA+AGG | - | chr5_3:42715775-42715794 | Msa0812570:CDS | 35.0% | |
| ! | CTACTACTTCTGGAAACAAA+TGG | - | chr5_3:42715917-42715936 | Msa0812570:CDS | 35.0% |
| ! | ACTACTTCTGGAAACAAATG+GGG | - | chr5_3:42715919-42715938 | Msa0812570:CDS | 35.0% |
| GGAGGAGTTTATTAAAAAGG+GGG | - | chr5_3:42716106-42716125 | Msa0812570:intron | 35.0% | |
| GAGGAGTTTATTAAAAAGGG+GGG | - | chr5_3:42716107-42716126 | Msa0812570:intron | 35.0% | |
| AGGAGTTTATTAAAAAGGGG+GGG | - | chr5_3:42716108-42716127 | Msa0812570:intron | 35.0% | |
| GAACAACTATTGGACCTAAA+GGG | - | chr5_3:42716138-42716157 | Msa0812570:intron | 35.0% | |
| GGATGAGAGTGATTATAAGA+AGG | - | chr5_3:42716178-42716197 | Msa0812570:intron | 35.0% | |
| AGGATGAGGAATGAAGTTAT+TGG | - | chr5_3:42716248-42716267 | Msa0812570:exon | 35.0% | |
| GAATCGAATCCTTAAAGTTG+GGG | - | chr5_3:42716315-42716334 | Msa0812570:intron | 35.0% | |
| !! | TTTGTTGTTCTCGGATAATG+AGG | - | chr5_3:42716425-42716444 | Msa0812570:intron | 35.0% |
| TTTGTGCTTTCTTGTGTATC+AGG | - | chr5_3:42716516-42716535 | Msa0812570:five_prime_UTR | 35.0% | |
| TTGTGCTTTCTTGTGTATCA+GGG | - | chr5_3:42716517-42716536 | Msa0812570:five_prime_UTR | 35.0% | |
| ATAATATGAAGATTGCCACG+AGG | + | chr5_3:42715390-42715409 | None:intergenic | 35.0% | |
| AAAAAGGCGAGAAAGAAAGT+TGG | + | chr5_3:42715454-42715473 | None:intergenic | 35.0% | |
| !! | GATGATGGTATTTTACTGCA+GGG | + | chr5_3:42715632-42715651 | None:intergenic | 35.0% |
| GAATGAATATGGAACGATGA+TGG | + | chr5_3:42715647-42715666 | None:intergenic | 35.0% | |
| GAGATTCCGATGAATGAATA+TGG | + | chr5_3:42715658-42715677 | None:intergenic | 35.0% | |
| ACAATCTAACATTGCACACA+AGG | - | chr5_3:42715775-42715794 | Msa0812570:CDS | 35.0% | |
| ! | CTACTACTTCTGGAAACAAA+TGG | - | chr5_3:42715917-42715936 | Msa0812570:CDS | 35.0% |
| ! | ACTACTTCTGGAAACAAATG+GGG | - | chr5_3:42715919-42715938 | Msa0812570:CDS | 35.0% |
| GGAGGAGTTTATTAAAAAGG+GGG | - | chr5_3:42716106-42716125 | Msa0812570:intron | 35.0% | |
| GAGGAGTTTATTAAAAAGGG+GGG | - | chr5_3:42716107-42716126 | Msa0812570:intron | 35.0% | |
| AGGAGTTTATTAAAAAGGGG+GGG | - | chr5_3:42716108-42716127 | Msa0812570:intron | 35.0% | |
| GAACAACTATTGGACCTAAA+GGG | - | chr5_3:42716138-42716157 | Msa0812570:intron | 35.0% | |
| GGATGAGAGTGATTATAAGA+AGG | - | chr5_3:42716178-42716197 | Msa0812570:intron | 35.0% | |
| AGGATGAGGAATGAAGTTAT+TGG | - | chr5_3:42716248-42716267 | Msa0812570:exon | 35.0% | |
| GAATCGAATCCTTAAAGTTG+GGG | - | chr5_3:42716315-42716334 | Msa0812570:intron | 35.0% | |
| !! | TTTGTTGTTCTCGGATAATG+AGG | - | chr5_3:42716425-42716444 | Msa0812570:intron | 35.0% |
| TTTGTGCTTTCTTGTGTATC+AGG | - | chr5_3:42716516-42716535 | Msa0812570:five_prime_UTR | 35.0% | |
| TTGTGCTTTCTTGTGTATCA+GGG | - | chr5_3:42716517-42716536 | Msa0812570:five_prime_UTR | 35.0% | |
| AGTGCTTCTGCAAAGGAAAA+TGG | + | chr5_3:42715419-42715438 | None:intergenic | 40.0% | |
| !! | CGATGATGGTATTTTACTGC+AGG | + | chr5_3:42715633-42715652 | None:intergenic | 40.0% |
| !!! | AATGTACCTGTTTTGGGTTG+CGG | + | chr5_3:42715728-42715747 | None:intergenic | 40.0% |
| GACCGAATAACTACTACTTC+TGG | - | chr5_3:42715907-42715926 | Msa0812570:CDS | 40.0% | |
| AGCTGGAACATTTGTATCAG+CGG | - | chr5_3:42716048-42716067 | Msa0812570:CDS | 40.0% | |
| ATTAAAAAGGGGGGGATGAT+TGG | - | chr5_3:42716116-42716135 | Msa0812570:intron | 40.0% | |
| GGGATGATTGGAACAACTAT+TGG | - | chr5_3:42716128-42716147 | Msa0812570:intron | 40.0% | |
| GGAACAACTATTGGACCTAA+AGG | - | chr5_3:42716137-42716156 | Msa0812570:intron | 40.0% | |
| AACTATTGGACCTAAAGGGA+TGG | - | chr5_3:42716142-42716161 | Msa0812570:intron | 40.0% | |
| GGATAAGAAGTTTGAGCAAG+AGG | - | chr5_3:42716208-42716227 | Msa0812570:intron | 40.0% | |
| ! | AGAAGCTTTGGTTTAGGATG+AGG | - | chr5_3:42716234-42716253 | Msa0812570:CDS | 40.0% |
| TGAAGTTATTGGTGAGCTTC+AGG | - | chr5_3:42716259-42716278 | Msa0812570:exon | 40.0% | |
| AGTGCTTCTGCAAAGGAAAA+TGG | + | chr5_3:42715419-42715438 | None:intergenic | 40.0% | |
| !! | CGATGATGGTATTTTACTGC+AGG | + | chr5_3:42715633-42715652 | None:intergenic | 40.0% |
| !!! | AATGTACCTGTTTTGGGTTG+CGG | + | chr5_3:42715728-42715747 | None:intergenic | 40.0% |
| GACCGAATAACTACTACTTC+TGG | - | chr5_3:42715907-42715926 | Msa0812570:CDS | 40.0% | |
| AGCTGGAACATTTGTATCAG+CGG | - | chr5_3:42716048-42716067 | Msa0812570:CDS | 40.0% | |
| ATTAAAAAGGGGGGGATGAT+TGG | - | chr5_3:42716116-42716135 | Msa0812570:intron | 40.0% | |
| GGGATGATTGGAACAACTAT+TGG | - | chr5_3:42716128-42716147 | Msa0812570:intron | 40.0% | |
| GGAACAACTATTGGACCTAA+AGG | - | chr5_3:42716137-42716156 | Msa0812570:intron | 40.0% | |
| AACTATTGGACCTAAAGGGA+TGG | - | chr5_3:42716142-42716161 | Msa0812570:intron | 40.0% | |
| GGATAAGAAGTTTGAGCAAG+AGG | - | chr5_3:42716208-42716227 | Msa0812570:intron | 40.0% | |
| ! | AGAAGCTTTGGTTTAGGATG+AGG | - | chr5_3:42716234-42716253 | Msa0812570:CDS | 40.0% |
| TGAAGTTATTGGTGAGCTTC+AGG | - | chr5_3:42716259-42716278 | Msa0812570:exon | 40.0% | |
| TTTCACTCATTCCCAATCCC+AGG | - | chr5_3:42715474-42715493 | Msa0812570:three_prime_UTR | 45.0% | |
| ! | TGTGTTTGTTAAGCGCACCT+GGG | + | chr5_3:42715494-42715513 | None:intergenic | 45.0% |
| ! | ATGTGTTTGTTAAGCGCACC+TGG | + | chr5_3:42715495-42715514 | None:intergenic | 45.0% |
| !! | GTTTCGAAGAAGCGTTTACG+AGG | + | chr5_3:42715704-42715723 | None:intergenic | 45.0% |
| ! | CTTCTGGAAACAAATGGGGA+AGG | - | chr5_3:42715923-42715942 | Msa0812570:CDS | 45.0% |
| GAAACAAATGGGGAAGGCTT+TGG | - | chr5_3:42715929-42715948 | Msa0812570:CDS | 45.0% | |
| TCTTTCTCTTCCTTCGGCAT+TGG | + | chr5_3:42716029-42716048 | None:intergenic | 45.0% | |
| TCCAGCTCTTTCTCTTCCTT+CGG | + | chr5_3:42716035-42716054 | None:intergenic | 45.0% | |
| TATTGGACCTAAAGGGATGG+TGG | - | chr5_3:42716145-42716164 | Msa0812570:intron | 45.0% | |
| TCATTCTCCACCATCCCTTT+AGG | + | chr5_3:42716155-42716174 | None:intergenic | 45.0% | |
| !! | AGGGATGGTGGAGAATGATA+TGG | - | chr5_3:42716157-42716176 | Msa0812570:intron | 45.0% |
| ! | AGGCTCAGAAGCTTTGGTTT+AGG | - | chr5_3:42716228-42716247 | Msa0812570:CDS | 45.0% |
| TATTGGTGAGCTTCAGGAGA+AGG | - | chr5_3:42716265-42716284 | Msa0812570:five_prime_UTR | 45.0% | |
| ATTGGTGAGCTTCAGGAGAA+GGG | - | chr5_3:42716266-42716285 | Msa0812570:five_prime_UTR | 45.0% | |
| CAAAGAAGCCAAATCCGATG+AGG | + | chr5_3:42716500-42716519 | None:intergenic | 45.0% | |
| TGCTTTCTTGTGTATCAGGG+TGG | - | chr5_3:42716520-42716539 | Msa0812570:five_prime_UTR | 45.0% | |
| TTTCACTCATTCCCAATCCC+AGG | - | chr5_3:42715474-42715493 | Msa0812570:three_prime_UTR | 45.0% | |
| ! | TGTGTTTGTTAAGCGCACCT+GGG | + | chr5_3:42715494-42715513 | None:intergenic | 45.0% |
| ! | ATGTGTTTGTTAAGCGCACC+TGG | + | chr5_3:42715495-42715514 | None:intergenic | 45.0% |
| !! | GTTTCGAAGAAGCGTTTACG+AGG | + | chr5_3:42715704-42715723 | None:intergenic | 45.0% |
| ! | CTTCTGGAAACAAATGGGGA+AGG | - | chr5_3:42715923-42715942 | Msa0812570:CDS | 45.0% |
| GAAACAAATGGGGAAGGCTT+TGG | - | chr5_3:42715929-42715948 | Msa0812570:CDS | 45.0% | |
| TCTTTCTCTTCCTTCGGCAT+TGG | + | chr5_3:42716029-42716048 | None:intergenic | 45.0% | |
| TCCAGCTCTTTCTCTTCCTT+CGG | + | chr5_3:42716035-42716054 | None:intergenic | 45.0% | |
| TATTGGACCTAAAGGGATGG+TGG | - | chr5_3:42716145-42716164 | Msa0812570:intron | 45.0% | |
| TCATTCTCCACCATCCCTTT+AGG | + | chr5_3:42716155-42716174 | None:intergenic | 45.0% | |
| !! | AGGGATGGTGGAGAATGATA+TGG | - | chr5_3:42716157-42716176 | Msa0812570:intron | 45.0% |
| ! | AGGCTCAGAAGCTTTGGTTT+AGG | - | chr5_3:42716228-42716247 | Msa0812570:CDS | 45.0% |
| TATTGGTGAGCTTCAGGAGA+AGG | - | chr5_3:42716265-42716284 | Msa0812570:five_prime_UTR | 45.0% | |
| ATTGGTGAGCTTCAGGAGAA+GGG | - | chr5_3:42716266-42716285 | Msa0812570:five_prime_UTR | 45.0% | |
| CAAAGAAGCCAAATCCGATG+AGG | + | chr5_3:42716500-42716519 | None:intergenic | 45.0% | |
| TGCTTTCTTGTGTATCAGGG+TGG | - | chr5_3:42716520-42716539 | Msa0812570:five_prime_UTR | 45.0% | |
| !! | ATAAAATGTAAAAAATTATT+GGG | + | chr5_3:42715820-42715839 | None:intergenic | 5.0% |
| !! | ATAAAATGTAAAAAATTATT+GGG | + | chr5_3:42715820-42715839 | None:intergenic | 5.0% |
| CTCGACAAGTGCTTCTGCAA+AGG | + | chr5_3:42715426-42715445 | None:intergenic | 50.0% | |
| TGTTAAGCGCACCTGGGATT+GGG | + | chr5_3:42715488-42715507 | None:intergenic | 50.0% | |
| TTGTTAAGCGCACCTGGGAT+TGG | + | chr5_3:42715489-42715508 | None:intergenic | 50.0% | |
| GAAACACCGCAACCCAAAAC+AGG | - | chr5_3:42715719-42715738 | Msa0812570:CDS | 50.0% | |
| GCGTGCACTTATGCAGTGAT+GGG | - | chr5_3:42715951-42715970 | Msa0812570:CDS | 50.0% | |
| !! | CACTTATGCAGTGATGGGTG+CGG | - | chr5_3:42715956-42715975 | Msa0812570:CDS | 50.0% |
| ATTCAACGAGACGTCGCCAT+TGG | - | chr5_3:42715986-42716005 | Msa0812570:CDS | 50.0% | |
| TTCAACGAGACGTCGCCATT+GGG | - | chr5_3:42715987-42716006 | Msa0812570:CDS | 50.0% | |
| TTCAACGTCCACCAACCCAA+TGG | + | chr5_3:42716005-42716024 | None:intergenic | 50.0% | |
| GTTTCCATATCCAGGAGACG+AGG | - | chr5_3:42716076-42716095 | Msa0812570:intron | 50.0% | |
| AGCAAGAGGCTCAGAAGCTT+TGG | - | chr5_3:42716222-42716241 | Msa0812570:CDS | 50.0% | |
| CTCGACAAGTGCTTCTGCAA+AGG | + | chr5_3:42715426-42715445 | None:intergenic | 50.0% | |
| TGTTAAGCGCACCTGGGATT+GGG | + | chr5_3:42715488-42715507 | None:intergenic | 50.0% | |
| TTGTTAAGCGCACCTGGGAT+TGG | + | chr5_3:42715489-42715508 | None:intergenic | 50.0% | |
| GAAACACCGCAACCCAAAAC+AGG | - | chr5_3:42715719-42715738 | Msa0812570:CDS | 50.0% | |
| GCGTGCACTTATGCAGTGAT+GGG | - | chr5_3:42715951-42715970 | Msa0812570:CDS | 50.0% | |
| !! | CACTTATGCAGTGATGGGTG+CGG | - | chr5_3:42715956-42715975 | Msa0812570:CDS | 50.0% |
| ATTCAACGAGACGTCGCCAT+TGG | - | chr5_3:42715986-42716005 | Msa0812570:CDS | 50.0% | |
| TTCAACGAGACGTCGCCATT+GGG | - | chr5_3:42715987-42716006 | Msa0812570:CDS | 50.0% | |
| TTCAACGTCCACCAACCCAA+TGG | + | chr5_3:42716005-42716024 | None:intergenic | 50.0% | |
| GTTTCCATATCCAGGAGACG+AGG | - | chr5_3:42716076-42716095 | Msa0812570:intron | 50.0% | |
| AGCAAGAGGCTCAGAAGCTT+TGG | - | chr5_3:42716222-42716241 | Msa0812570:CDS | 50.0% | |
| GGCGTGCACTTATGCAGTGA+TGG | - | chr5_3:42715950-42715969 | Msa0812570:CDS | 55.0% | |
| GACGTTGAAGCCAATGCCGA+AGG | - | chr5_3:42716016-42716035 | Msa0812570:CDS | 55.0% | |
| GCCGAAGGAAGAGAAAGAGC+TGG | - | chr5_3:42716031-42716050 | Msa0812570:CDS | 55.0% | |
| CGGCGTGAGTTTCCATATCC+AGG | - | chr5_3:42716068-42716087 | Msa0812570:CDS | 55.0% | |
| GCTTCCTCGTCTCCTGGATA+TGG | + | chr5_3:42716083-42716102 | None:intergenic | 55.0% | |
| TCCAGGAGACGAGGAAGCTA+TGG | - | chr5_3:42716085-42716104 | Msa0812570:intron | 55.0% | |
| TCCATAGCTTCCTCGTCTCC+TGG | + | chr5_3:42716089-42716108 | None:intergenic | 55.0% | |
| AGGAGACGAGGAAGCTATGG+AGG | - | chr5_3:42716088-42716107 | Msa0812570:intron | 55.0% | |
| GGCGTGCACTTATGCAGTGA+TGG | - | chr5_3:42715950-42715969 | Msa0812570:CDS | 55.0% | |
| GACGTTGAAGCCAATGCCGA+AGG | - | chr5_3:42716016-42716035 | Msa0812570:CDS | 55.0% | |
| GCCGAAGGAAGAGAAAGAGC+TGG | - | chr5_3:42716031-42716050 | Msa0812570:CDS | 55.0% | |
| CGGCGTGAGTTTCCATATCC+AGG | - | chr5_3:42716068-42716087 | Msa0812570:CDS | 55.0% | |
| GCTTCCTCGTCTCCTGGATA+TGG | + | chr5_3:42716083-42716102 | None:intergenic | 55.0% | |
| TCCAGGAGACGAGGAAGCTA+TGG | - | chr5_3:42716085-42716104 | Msa0812570:intron | 55.0% | |
| TCCATAGCTTCCTCGTCTCC+TGG | + | chr5_3:42716089-42716108 | None:intergenic | 55.0% | |
| AGGAGACGAGGAAGCTATGG+AGG | - | chr5_3:42716088-42716107 | Msa0812570:intron | 55.0% | |
| ACGAGACGTCGCCATTGGGT+TGG | - | chr5_3:42715991-42716010 | Msa0812570:CDS | 60.0% | |
| !! | AGACGTCGCCATTGGGTTGG+TGG | - | chr5_3:42715994-42716013 | Msa0812570:CDS | 60.0% |
| ACGAGACGTCGCCATTGGGT+TGG | - | chr5_3:42715991-42716010 | Msa0812570:CDS | 60.0% | |
| !! | AGACGTCGCCATTGGGTTGG+TGG | - | chr5_3:42715994-42716013 | Msa0812570:CDS | 60.0% |
| !! | ATGCAGTGATGGGTGCGGCG+TGG | - | chr5_3:42715961-42715980 | Msa0812570:CDS | 65.0% |
| !! | ATGCAGTGATGGGTGCGGCG+TGG | - | chr5_3:42715961-42715980 | Msa0812570:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 42715373 | 42716586 | 42715373 | ID=Msa0812570;Name=Msa0812570 |
| chr5_3 | mRNA | 42715373 | 42716586 | 42715373 | ID=Msa0812570-mRNA-1;Parent=Msa0812570;Name=Msa0812570-mRNA-1;_AED=0.00;_eAED=0.00;_QI=184|1|1|1|0.5|0.66|3|279|161 |
| chr5_3 | exon | 42715373 | 42716094 | 42715373 | ID=Msa0812570-mRNA-1:exon:13158;Parent=Msa0812570-mRNA-1 |
| chr5_3 | exon | 42716219 | 42716322 | 42716219 | ID=Msa0812570-mRNA-1:exon:13157;Parent=Msa0812570-mRNA-1 |
| chr5_3 | exon | 42716464 | 42716586 | 42716464 | ID=Msa0812570-mRNA-1:exon:13156;Parent=Msa0812570-mRNA-1 |
| chr5_3 | five_prime_UTR | 42716464 | 42716586 | 42716464 | ID=Msa0812570-mRNA-1:five_prime_utr;Parent=Msa0812570-mRNA-1 |
| chr5_3 | five_prime_UTR | 42716262 | 42716322 | 42716262 | ID=Msa0812570-mRNA-1:five_prime_utr;Parent=Msa0812570-mRNA-1 |
| chr5_3 | CDS | 42716219 | 42716261 | 42716219 | ID=Msa0812570-mRNA-1:cds;Parent=Msa0812570-mRNA-1 |
| chr5_3 | CDS | 42715652 | 42716094 | 42715652 | ID=Msa0812570-mRNA-1:cds;Parent=Msa0812570-mRNA-1 |
| chr5_3 | three_prime_UTR | 42715373 | 42715651 | 42715373 | ID=Msa0812570-mRNA-1:three_prime_utr;Parent=Msa0812570-mRNA-1 |
| Gene Sequence |
| Protein sequence |
