Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0442190 | AES68536.1 | 79.151 | 259 | 18 | 4 | 16 | 240 | 18 | 274 | 3.29e-134 | 390 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0442190 | sp|Q9LTT3|HMG10_ARATH | 46.199 | 171 | 60 | 6 | 34 | 180 | 34 | 196 | 2.14e-32 | 124 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0442190 | G7J0D1 | 79.151 | 259 | 18 | 4 | 16 | 240 | 18 | 274 | 1.57e-134 | 390 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0442190 | TR | ARID |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003640 | Msa0442190 | 0.812513 | 4.083082e-51 | -8.615850e-47 |
| Msa0006070 | Msa0442190 | 0.809274 | 2.051868e-50 | -8.615850e-47 |
| Msa0011170 | Msa0442190 | 0.802138 | 6.466479e-49 | -8.615850e-47 |
| Msa0011960 | Msa0442190 | 0.800463 | 1.424445e-48 | -8.615850e-47 |
| Msa0013050 | Msa0442190 | -0.825482 | 4.575492e-54 | -8.615850e-47 |
| Msa0023000 | Msa0442190 | 0.826513 | 2.603888e-54 | -8.615850e-47 |
| Msa0025730 | Msa0442190 | 0.802857 | 4.596521e-49 | -8.615850e-47 |
| Msa0026710 | Msa0442190 | 0.800311 | 1.529304e-48 | -8.615850e-47 |
| Msa0032580 | Msa0442190 | 0.829016 | 6.517148e-55 | -8.615850e-47 |
| Msa0037700 | Msa0442190 | 0.803087 | 4.120195e-49 | -8.615850e-47 |
| Msa0052770 | Msa0442190 | 0.817532 | 3.141218e-52 | -8.615850e-47 |
| Msa0058300 | Msa0442190 | 0.840045 | 1.101274e-57 | -8.615850e-47 |
| Msa0065950 | Msa0442190 | 0.807074 | 6.036541e-50 | -8.615850e-47 |
| Msa0067990 | Msa0442190 | 0.800626 | 1.319587e-48 | -8.615850e-47 |
| Msa0075500 | Msa0442190 | 0.805303 | 1.424613e-49 | -8.615850e-47 |
| Msa0075960 | Msa0442190 | 0.808662 | 2.773725e-50 | -8.615850e-47 |
| Msa0083310 | Msa0442190 | 0.820150 | 7.985893e-53 | -8.615850e-47 |
| Msa0084940 | Msa0442190 | 0.807798 | 4.238454e-50 | -8.615850e-47 |
| Msa0097780 | Msa0442190 | 0.805079 | 1.587369e-49 | -8.615850e-47 |
| Msa0098140 | Msa0442190 | -0.801298 | 9.617305e-49 | -8.615850e-47 |
| Msa0105620 | Msa0442190 | 0.811615 | 6.407852e-51 | -8.615850e-47 |
| Msa0115270 | Msa0442190 | 0.818329 | 2.074930e-52 | -8.615850e-47 |
| Msa0118780 | Msa0442190 | 0.816084 | 6.634728e-52 | -8.615850e-47 |
| Msa0119850 | Msa0442190 | 0.803673 | 3.116150e-49 | -8.615850e-47 |
| Msa0144540 | Msa0442190 | 0.805675 | 1.190587e-49 | -8.615850e-47 |
| Msa0145440 | Msa0442190 | 0.818730 | 1.682540e-52 | -8.615850e-47 |
| Msa0145730 | Msa0442190 | 0.807742 | 4.356838e-50 | -8.615850e-47 |
| Msa0150820 | Msa0442190 | 0.824670 | 7.116560e-54 | -8.615850e-47 |
| Msa0150840 | Msa0442190 | 0.801424 | 9.063549e-49 | -8.615850e-47 |
| Msa0159180 | Msa0442190 | 0.810802 | 9.618439e-51 | -8.615850e-47 |
| Msa0160550 | Msa0442190 | 0.825889 | 3.664182e-54 | -8.615850e-47 |
| Msa0165660 | Msa0442190 | 0.801373 | 9.283650e-49 | -8.615850e-47 |
| Msa0171540 | Msa0442190 | 0.807298 | 5.412287e-50 | -8.615850e-47 |
| Msa0172970 | Msa0442190 | 0.824814 | 6.582458e-54 | -8.615850e-47 |
| Msa0180500 | Msa0442190 | 0.816321 | 5.874666e-52 | -8.615850e-47 |
| Msa0189520 | Msa0442190 | 0.803415 | 3.525063e-49 | -8.615850e-47 |
| Msa0193120 | Msa0442190 | 0.801325 | 9.498279e-49 | -8.615850e-47 |
| Msa0194480 | Msa0442190 | 0.800031 | 1.743787e-48 | -8.615850e-47 |
| Msa0220720 | Msa0442190 | 0.809809 | 1.574748e-50 | -8.615850e-47 |
| Msa0226890 | Msa0442190 | 0.805772 | 1.135669e-49 | -8.615850e-47 |
| Msa0228070 | Msa0442190 | 0.818612 | 1.789987e-52 | -8.615850e-47 |
| Msa0369050 | Msa0442190 | 0.823848 | 1.110344e-53 | -8.615850e-47 |
| Msa0369220 | Msa0442190 | 0.808817 | 2.570112e-50 | -8.615850e-47 |
| Msa0372340 | Msa0442190 | 0.821394 | 4.134136e-53 | -8.615850e-47 |
| Msa0374750 | Msa0442190 | 0.831549 | 1.567527e-55 | -8.615850e-47 |
| Msa0383800 | Msa0442190 | 0.816883 | 4.394164e-52 | -8.615850e-47 |
| Msa0387750 | Msa0442190 | 0.819396 | 1.187029e-52 | -8.615850e-47 |
| Msa0397540 | Msa0442190 | 0.809181 | 2.147971e-50 | -8.615850e-47 |
| Msa0398950 | Msa0442190 | 0.810027 | 1.413770e-50 | -8.615850e-47 |
| Msa0402790 | Msa0442190 | 0.866622 | 2.492311e-65 | -8.615850e-47 |
| Msa0405370 | Msa0442190 | 0.803357 | 3.623863e-49 | -8.615850e-47 |
| Msa0416650 | Msa0442190 | 0.802705 | 4.941005e-49 | -8.615850e-47 |
| Msa0432770 | Msa0442190 | 0.800240 | 1.581349e-48 | -8.615850e-47 |
| Msa0442190 | Msa0442200 | 0.811386 | 7.185794e-51 | -8.615850e-47 |
| Msa0442190 | Msa0479660 | 0.814402 | 1.569048e-51 | -8.615850e-47 |
| Msa0442190 | Msa0480000 | 0.803588 | 3.244578e-49 | -8.615850e-47 |
| Msa0442190 | Msa0481530 | 0.805534 | 1.274145e-49 | -8.615850e-47 |
| Msa0442190 | Msa0493410 | 0.812886 | 3.383832e-51 | -8.615850e-47 |
| Msa0442190 | Msa0508590 | 0.801236 | 9.904066e-49 | -8.615850e-47 |
| Msa0442190 | Msa0512750 | 0.819280 | 1.261513e-52 | -8.615850e-47 |
| Msa0442190 | Msa0519000 | 0.808049 | 3.749197e-50 | -8.615850e-47 |
| Msa0442190 | Msa0529890 | 0.803453 | 3.460819e-49 | -8.615850e-47 |
| Msa0442190 | Msa0541360 | 0.829059 | 6.363135e-55 | -8.615850e-47 |
| Msa0442190 | Msa0541410 | 0.804672 | 1.930750e-49 | -8.615850e-47 |
| Msa0442190 | Msa0545700 | 0.820258 | 7.542223e-53 | -8.615850e-47 |
| Msa0442190 | Msa0555450 | 0.833785 | 4.367587e-56 | -8.615850e-47 |
| Msa0442190 | Msa0556060 | 0.802934 | 4.431633e-49 | -8.615850e-47 |
| Msa0442190 | Msa0585560 | 0.800716 | 1.264655e-48 | -8.615850e-47 |
| Msa0442190 | Msa0592440 | 0.819026 | 1.441319e-52 | -8.615850e-47 |
| Msa0442190 | Msa0597330 | 0.818441 | 1.956681e-52 | -8.615850e-47 |
| Msa0442190 | Msa0610430 | 0.829031 | 6.463379e-55 | -8.615850e-47 |
| Msa0442190 | Msa0625720 | 0.800932 | 1.142885e-48 | -8.615850e-47 |
| Msa0442190 | Msa0632870 | 0.803820 | 2.904700e-49 | -8.615850e-47 |
| Msa0442190 | Msa0636070 | 0.830387 | 3.021674e-55 | -8.615850e-47 |
| Msa0442190 | Msa0643350 | 0.805758 | 1.143532e-49 | -8.615850e-47 |
| Msa0442190 | Msa0643560 | 0.816745 | 4.719516e-52 | -8.615850e-47 |
| Msa0442190 | Msa0661190 | -0.822163 | 2.743778e-53 | -8.615850e-47 |
| Msa0442190 | Msa0663390 | 0.807599 | 4.672915e-50 | -8.615850e-47 |
| Msa0442190 | Msa0663920 | 0.810287 | 1.242469e-50 | -8.615850e-47 |
| Msa0442190 | Msa0673460 | 0.811551 | 6.615935e-51 | -8.615850e-47 |
| Msa0442190 | Msa0675410 | 0.830602 | 2.678125e-55 | -8.615850e-47 |
| Msa0442190 | Msa0688960 | 0.828506 | 8.654390e-55 | -8.615850e-47 |
| Msa0442190 | Msa0692830 | 0.828865 | 7.087563e-55 | -8.615850e-47 |
| Msa0442190 | Msa0692950 | 0.824764 | 6.764428e-54 | -8.615850e-47 |
| Msa0442190 | Msa0698540 | 0.830569 | 2.727354e-55 | -8.615850e-47 |
| Msa0442190 | Msa0716840 | 0.820752 | 5.808158e-53 | -8.615850e-47 |
| Msa0442190 | Msa0722020 | 0.817593 | 3.043200e-52 | -8.615850e-47 |
| Msa0442190 | Msa0737600 | 0.806082 | 9.777853e-50 | -8.615850e-47 |
| Msa0442190 | Msa0743720 | 0.820427 | 6.897181e-53 | -8.615850e-47 |
| Msa0442190 | Msa0750170 | 0.802857 | 4.596590e-49 | -8.615850e-47 |
| Msa0442190 | Msa0763020 | 0.805651 | 1.204258e-49 | -8.615850e-47 |
| Msa0442190 | Msa0763070 | 0.808016 | 3.808751e-50 | -8.615850e-47 |
| Msa0442190 | Msa0777230 | 0.801032 | 1.090428e-48 | -8.615850e-47 |
| Msa0442190 | Msa0784860 | 0.806308 | 8.762168e-50 | -8.615850e-47 |
| Msa0442190 | Msa0793800 | 0.808861 | 2.514770e-50 | -8.615850e-47 |
| Msa0442190 | Msa0808080 | 0.812796 | 3.540923e-51 | -8.615850e-47 |
| Msa0442190 | Msa0844450 | 0.806877 | 6.643815e-50 | -8.615850e-47 |
| Msa0442190 | Msa0849030 | 0.822346 | 2.488479e-53 | -8.615850e-47 |
| Msa0442190 | Msa0871270 | 0.813674 | 2.270767e-51 | -8.615850e-47 |
| Msa0442190 | Msa0938220 | 0.811964 | 5.378329e-51 | -8.615850e-47 |
| Msa0442190 | Msa0944190 | 0.802419 | 5.659653e-49 | -8.615850e-47 |
| Msa0442190 | Msa0945970 | 0.805444 | 1.331139e-49 | -8.615850e-47 |
| Msa0442190 | Msa0969810 | 0.822355 | 2.476652e-53 | -8.615850e-47 |
| Msa0442190 | Msa0982430 | 0.814805 | 1.277743e-51 | -8.615850e-47 |
| Msa0442190 | Msa0999970 | 0.836125 | 1.123700e-56 | -8.615850e-47 |
| Msa0442190 | Msa1003620 | 0.809686 | 1.674110e-50 | -8.615850e-47 |
| Msa0442190 | Msa1009820 | 0.815179 | 1.055608e-51 | -8.615850e-47 |
| Msa0442190 | Msa1012830 | 0.839912 | 1.192592e-57 | -8.615850e-47 |
| Msa0442190 | Msa1014540 | 0.806693 | 7.266898e-50 | -8.615850e-47 |
| Msa0442190 | Msa1037420 | 0.853018 | 3.151725e-61 | -8.615850e-47 |
| Msa0442190 | Msa1046020 | 0.842114 | 3.150574e-58 | -8.615850e-47 |
| Msa0442190 | Msa1046060 | 0.846080 | 2.719630e-59 | -8.615850e-47 |
| Msa0442190 | Msa1046460 | 0.803951 | 2.727538e-49 | -8.615850e-47 |
| Msa0442190 | Msa1051200 | 0.834918 | 2.269527e-56 | -8.615850e-47 |
| Msa0442190 | Msa1087710 | 0.813818 | 2.110918e-51 | -8.615850e-47 |
| Msa0442190 | Msa1091100 | 0.841654 | 4.168576e-58 | -8.615850e-47 |
| Msa0442190 | Msa1091940 | 0.805737 | 1.155476e-49 | -8.615850e-47 |
| Msa0442190 | Msa1123810 | 0.824313 | 8.637074e-54 | -8.615850e-47 |
| Msa0442190 | Msa1124410 | 0.807272 | 5.481742e-50 | -8.615850e-47 |
| Msa0442190 | Msa1134090 | 0.834564 | 2.786086e-56 | -8.615850e-47 |
| Msa0442190 | Msa1137700 | 0.819662 | 1.032635e-52 | -8.615850e-47 |
| Msa0442190 | Msa1143930 | -0.808839 | 2.542369e-50 | -8.615850e-47 |
| Msa0442190 | Msa1173140 | 0.814215 | 1.725529e-51 | -8.615850e-47 |
| Msa0442190 | Msa1174040 | 0.804489 | 2.107836e-49 | -8.615850e-47 |
| Msa0442190 | Msa1181250 | 0.801400 | 9.166578e-49 | -8.615850e-47 |
| Msa0442190 | Msa1190930 | 0.834737 | 2.521287e-56 | -8.615850e-47 |
| Msa0442190 | Msa1208880 | 0.804955 | 1.684772e-49 | -8.615850e-47 |
| Msa0442190 | Msa1210020 | 0.801683 | 8.019998e-49 | -8.615850e-47 |
| Msa0442190 | Msa1211890 | 0.821492 | 3.922464e-53 | -8.615850e-47 |
| Msa0442190 | Msa1224810 | 0.809765 | 1.609607e-50 | -8.615850e-47 |
| Msa0442190 | Msa1244610 | 0.828802 | 7.343164e-55 | -8.615850e-47 |
| Msa0442190 | Msa1245930 | 0.805874 | 1.081305e-49 | -8.615850e-47 |
| Msa0442190 | Msa1253020 | 0.835068 | 2.080699e-56 | -8.615850e-47 |
| Msa0442190 | Msa1254730 | 0.817697 | 2.882423e-52 | -8.615850e-47 |
| Msa0442190 | Msa1259060 | 0.800686 | 1.283120e-48 | -8.615850e-47 |
| Msa0442190 | Msa1275360 | 0.816825 | 4.529174e-52 | -8.615850e-47 |
| Msa0442190 | Msa1286800 | 0.801303 | 9.596087e-49 | -8.615850e-47 |
| Msa0442190 | Msa1293280 | 0.800273 | 1.557316e-48 | -8.615850e-47 |
| Msa0442190 | Msa1293510 | 0.819985 | 8.710248e-53 | -8.615850e-47 |
| Msa0442190 | Msa1306560 | 0.803329 | 3.671820e-49 | -8.615850e-47 |
| Msa0442190 | Msa1306760 | 0.801387 | 9.224395e-49 | -8.615850e-47 |
| Msa0442190 | Msa1306860 | 0.812379 | 4.368065e-51 | -8.615850e-47 |
| Msa0442190 | Msa1332040 | -0.824524 | 7.704438e-54 | -8.615850e-47 |
| Msa0442190 | Msa1340470 | 0.820007 | 8.610864e-53 | -8.615850e-47 |
| Msa0442190 | Msa1345220 | 0.817095 | 3.938341e-52 | -8.615850e-47 |
| Msa0442190 | Msa1385770 | 0.833060 | 6.624670e-56 | -8.615850e-47 |
| Msa0442190 | Msa1386780 | 0.846684 | 1.860711e-59 | -8.615850e-47 |
| Msa0442190 | Msa1400580 | 0.800193 | 1.616537e-48 | -8.615850e-47 |
| Msa0442190 | Msa1403340 | 0.814191 | 1.747212e-51 | -8.615850e-47 |
| Msa0442190 | Msa1409240 | 0.831574 | 1.545066e-55 | -8.615850e-47 |
| Msa0442190 | Msa1409880 | 0.805534 | 1.274475e-49 | -8.615850e-47 |
| Msa0442190 | Msa1410100 | 0.802715 | 4.917732e-49 | -8.615850e-47 |
| Msa0442190 | Msa1419800 | -0.809064 | 2.275761e-50 | -8.615850e-47 |
| Msa0442190 | Msa1420990 | 0.821795 | 3.338414e-53 | -8.615850e-47 |
| Msa0442190 | Msa1434140 | 0.821632 | 3.641322e-53 | -8.615850e-47 |
| Msa0442190 | Msa1440000 | 0.807132 | 5.867704e-50 | -8.615850e-47 |
| Msa0442190 | Msa1451550 | 0.829379 | 5.320085e-55 | -8.615850e-47 |
| Msa0255080 | Msa0442190 | 0.801696 | 7.972733e-49 | -8.615850e-47 |
| Msa0260680 | Msa0442190 | 0.802334 | 5.893299e-49 | -8.615850e-47 |
| Msa0262310 | Msa0442190 | 0.802753 | 4.830662e-49 | -8.615850e-47 |
| Msa0264150 | Msa0442190 | 0.801630 | 8.224683e-49 | -8.615850e-47 |
| Msa0279700 | Msa0442190 | 0.812134 | 4.939904e-51 | -8.615850e-47 |
| Msa0279790 | Msa0442190 | 0.805395 | 1.362643e-49 | -8.615850e-47 |
| Msa0298700 | Msa0442190 | 0.840034 | 1.108384e-57 | -8.615850e-47 |
| Msa0299870 | Msa0442190 | 0.834365 | 3.125809e-56 | -8.615850e-47 |
| Msa0309770 | Msa0442190 | 0.817021 | 4.091860e-52 | -8.615850e-47 |
| Msa0318980 | Msa0442190 | 0.802198 | 6.286936e-49 | -8.615850e-47 |
| Msa0337240 | Msa0442190 | 0.822765 | 1.988447e-53 | -8.615850e-47 |
| Msa0339250 | Msa0442190 | 0.803926 | 2.760752e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0442190 | MtrunA17_Chr3g0079841 | 79.151 | 259 | 18 | 4 | 16 | 240 | 18 | 274 | 3.03e-138 | 390 |
| Msa0442190 | MtrunA17_Chr1g0213311 | 38.860 | 193 | 77 | 4 | 29 | 180 | 24 | 216 | 3.35e-32 | 122 |
| Msa0442190 | MtrunA17_Chr3g0143581 | 43.802 | 121 | 44 | 2 | 29 | 125 | 20 | 140 | 1.87e-24 | 96.7 |
| Msa0442190 | MtrunA17_Chr7g0214501 | 40.541 | 111 | 41 | 2 | 70 | 180 | 3 | 88 | 1.05e-15 | 75.5 |
| Msa0442190 | MtrunA17_Chr2g0320431 | 85.000 | 40 | 5 | 1 | 142 | 180 | 216 | 255 | 9.27e-13 | 66.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0442190 | AT3G13350.1 | 46.199 | 171 | 60 | 6 | 34 | 180 | 34 | 196 | 2.17e-33 | 124 |
| Msa0442190 | AT1G55650.1 | 33.333 | 264 | 98 | 7 | 36 | 231 | 30 | 283 | 2.84e-33 | 124 |
| Msa0442190 | AT1G76110.1 | 36.321 | 212 | 98 | 5 | 1 | 180 | 1 | 207 | 1.48e-28 | 111 |
| Msa0442190 | AT1G04880.1 | 36.364 | 198 | 87 | 5 | 32 | 193 | 21 | 215 | 1.74e-27 | 110 |
Find 67 sgRNAs with CRISPR-Local
Find 331 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGAGCAATTAGTAGGAAAAT+TGG | 0.205100 | 3_3:-11620104 | Msa0442190:CDS |
| TAATTTAATGCAGGTTTATC+AGG | 0.284330 | 3_3:-11618819 | Msa0442190:intron |
| TATCAATGATTCACCTGTTC+AGG | 0.286987 | 3_3:-11621464 | Msa0442190:CDS |
| TTGACATGTGGTGTAAATTA+TGG | 0.291819 | 3_3:-11618615 | Msa0442190:three_prime_UTR |
| CTCCTCAGTGGACTCTTATA+TGG | 0.303277 | 3_3:-11618730 | Msa0442190:CDS |
| CAAGTCTATACCTGTCTTGC+TGG | 0.309127 | 3_3:+11620056 | None:intergenic |
| AGGTAATTGTAGATCGTAAA+TGG | 0.317695 | 3_3:-11621762 | Msa0442190:CDS |
| GGTGCGGTTGGAGGAGGATA+AGG | 0.340377 | 3_3:+11624071 | None:intergenic |
| TGAGAGGTAAAGAAAGATAC+AGG | 0.353025 | 3_3:-11618787 | Msa0442190:CDS |
| GAGCAATTAGTAGGAAAATT+GGG | 0.369568 | 3_3:-11620103 | Msa0442190:CDS |
| CATAACAAGCGCATCATTCA+TGG | 0.386953 | 3_3:-11621704 | Msa0442190:CDS |
| CGTATTGGTTGTGAAGCTAT+TGG | 0.406695 | 3_3:+11621498 | None:intergenic |
| TTCATTGACTTACCCTGAAC+AGG | 0.413930 | 3_3:+11621451 | None:intergenic |
| TGCAGGTTTATCAGGAGAAA+AGG | 0.428315 | 3_3:-11618811 | Msa0442190:intron |
| GTGCGGTTGGAGGAGGATAA+GGG | 0.433456 | 3_3:+11624072 | None:intergenic |
| GTGATAAAGCAACGATAGAT+AGG | 0.439414 | 3_3:+11621672 | None:intergenic |
| CATGAATGATGCGCTTGTTA+TGG | 0.445119 | 3_3:+11621705 | None:intergenic |
| ATCAAAGAACAAAAGGTTTG+AGG | 0.461275 | 3_3:+11618704 | None:intergenic |
| TCCTTGTGGCCTGCAAAATG+AGG | 0.463327 | 3_3:+11620124 | None:intergenic |
| ACAATTGACATGAAATTTGA+TGG | 0.468681 | 3_3:-11620362 | Msa0442190:CDS |
| ATATATAGTTACGGTGGACC+TGG | 0.474943 | 3_3:-11620336 | Msa0442190:CDS |
| GATAGCAGCACCGTCCGTAT+TGG | 0.475279 | 3_3:+11621483 | None:intergenic |
| ATCTCGTGGTGGTATTGAAA+AGG | 0.485522 | 3_3:-11622009 | Msa0442190:intron |
| TCAGAGTAAGGTGCGGTTGG+AGG | 0.486118 | 3_3:+11624062 | None:intergenic |
| AAATAAAATCAAAGAACAAA+AGG | 0.486150 | 3_3:+11618697 | None:intergenic |
| AAGCTATGGATTATAATTCA+AGG | 0.488473 | 3_3:-11618501 | Msa0442190:three_prime_UTR |
| CTTCACTAACCAGGTGTTGA+GGG | 0.490947 | 3_3:+11621613 | None:intergenic |
| TCTGACAGACCCAGCAAGAC+AGG | 0.501134 | 3_3:-11620066 | Msa0442190:intron |
| GAGTAAGGTGCGGTTGGAGG+AGG | 0.503378 | 3_3:+11624065 | None:intergenic |
| AAGTCTATACCTGTCTTGCT+GGG | 0.513096 | 3_3:+11620057 | None:intergenic |
| CTCTATCCAGATGCTTTGAG+TGG | 0.513745 | 3_3:-11621529 | Msa0442190:intron |
| ATCAATGATTCACCTGTTCA+GGG | 0.519797 | 3_3:-11621463 | Msa0442190:intron |
| CCTTGTGGCCTGCAAAATGA+GGG | 0.521599 | 3_3:+11620125 | None:intergenic |
| TCTTAGCACATGATAAGCTA+TGG | 0.531279 | 3_3:-11618515 | Msa0442190:three_prime_UTR |
| TTCCTACTAATTGCTCCTTG+TGG | 0.533197 | 3_3:+11620110 | None:intergenic |
| GGAAAATTGGGTTTGCGTGG+AGG | 0.541228 | 3_3:-11620091 | Msa0442190:CDS |
| CAATAGCTTCACAACCAATA+CGG | 0.543956 | 3_3:-11621497 | Msa0442190:CDS |
| TGATGGCGGATATATAGTTA+CGG | 0.545231 | 3_3:-11620345 | Msa0442190:CDS |
| CAAGTCCCTCCCTCAACACC+TGG | 0.550783 | 3_3:-11621622 | Msa0442190:intron |
| AGATCAGAGTAAGGTGCGGT+TGG | 0.552605 | 3_3:+11624059 | None:intergenic |
| ATTAGTCCAGCACAGACACT+TGG | 0.556813 | 3_3:-11620401 | Msa0442190:intron |
| GGCCACAAGGAGCAATTAGT+AGG | 0.560286 | 3_3:-11620112 | Msa0442190:CDS |
| ATGCGCTTGTTATGGTATCT+CGG | 0.562285 | 3_3:+11621713 | None:intergenic |
| CCACTGAGGAGCTGAACCGT+TGG | 0.566627 | 3_3:+11618742 | None:intergenic |
| TATCAGGAGAAAAGGTTGAG+AGG | 0.569076 | 3_3:-11618803 | Msa0442190:CDS |
| TTCGTTGAAGTAACATCTCG+TGG | 0.581244 | 3_3:-11622023 | Msa0442190:intron |
| TCACGAACAAGATCAGAGTA+AGG | 0.583182 | 3_3:+11624050 | None:intergenic |
| TCTTCACTAACCAGGTGTTG+AGG | 0.585501 | 3_3:+11621612 | None:intergenic |
| CTGGGTTCTGAACAGCTGAA+AGG | 0.586271 | 3_3:-11620317 | Msa0442190:CDS |
| GTAGGAAAATTGGGTTTGCG+TGG | 0.592801 | 3_3:-11620094 | Msa0442190:CDS |
| CACTAACCAGGTGTTGAGGG+AGG | 0.596662 | 3_3:+11621616 | None:intergenic |
| AATTGTAGATCGTAAATGGA+AGG | 0.598698 | 3_3:-11621758 | Msa0442190:CDS |
| ACACTTGGTTCTTCAGTGCG+TGG | 0.611516 | 3_3:-11620386 | Msa0442190:CDS |
| TGTAGATCGTAAATGGAAGG+AGG | 0.611934 | 3_3:-11621755 | Msa0442190:CDS |
| ACTAACCAGGTGTTGAGGGA+GGG | 0.618972 | 3_3:+11621617 | None:intergenic |
| TATATAGTTACGGTGGACCT+GGG | 0.620088 | 3_3:-11620335 | Msa0442190:CDS |
| CTTTCAGCTGTTCAGAACCC+AGG | 0.626176 | 3_3:+11620318 | None:intergenic |
| AGCTTCACAACCAATACGGA+CGG | 0.629115 | 3_3:-11621493 | Msa0442190:CDS |
| CCAACGGTTCAGCTCCTCAG+TGG | 0.666024 | 3_3:-11618742 | Msa0442190:CDS |
| GAGAGGTAAAGAAAGATACA+GGG | 0.667758 | 3_3:-11618786 | Msa0442190:CDS |
| ATGTTGAAGTACAAATCCAA+CGG | 0.669092 | 3_3:-11618758 | Msa0442190:CDS |
| ATTGACATGAAATTTGATGG+CGG | 0.676313 | 3_3:-11620359 | Msa0442190:CDS |
| ACATGTGGTGTAAATTATGG+CGG | 0.692070 | 3_3:-11618612 | Msa0442190:three_prime_UTR |
| AACAAGATCAGAGTAAGGTG+CGG | 0.707258 | 3_3:+11624055 | None:intergenic |
| TGGCGGATATATAGTTACGG+TGG | 0.725652 | 3_3:-11620342 | Msa0442190:CDS |
| GTTGAAGTAACATCTCGTGG+TGG | 0.754811 | 3_3:-11622020 | Msa0442190:intron |
| TTCCATATAAGAGTCCACTG+AGG | 0.814756 | 3_3:+11618728 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTGTAAAAATTGTATTTTAT+TGG | - | chr3_3:11620054-11620073 | Msa0442190:intron | 10.0% |
| !! | TAAAATTAGTAATATATGTA+TGG | - | chr3_3:11622814-11622833 | Msa0442190:intron | 10.0% |
| !! | AAAATTAAAATTCGCTTAAA+TGG | - | chr3_3:11619475-11619494 | Msa0442190:intron | 15.0% |
| !!! | TTTTATTGGATAGTATAATA+TGG | - | chr3_3:11620068-11620087 | Msa0442190:CDS | 15.0% |
| !!! | TTTTATGCACAAAAAAATAT+AGG | - | chr3_3:11620216-11620235 | Msa0442190:intron | 15.0% |
| !! | AAATTTAAGAAAAAGATTAG+AGG | + | chr3_3:11620846-11620865 | None:intergenic | 15.0% |
| !!! | TCTTTTTCTTAAATTTATGT+AGG | - | chr3_3:11620850-11620869 | Msa0442190:intron | 15.0% |
| !!! | TATTTTTTTATCTCTTGTTA+CGG | - | chr3_3:11621624-11621643 | Msa0442190:CDS | 15.0% |
| !!! | ATGATTTGTTTCTTTAATTT+AGG | - | chr3_3:11621720-11621739 | Msa0442190:CDS | 15.0% |
| !!! | ACAAATCTATAAATGTTTTA+AGG | + | chr3_3:11623145-11623164 | None:intergenic | 15.0% |
| !! | AAATTCTACTTATGAAAAAA+TGG | - | chr3_3:11623391-11623410 | Msa0442190:intron | 15.0% |
| !!! | TCTTAGTTTTATATGAAAAT+AGG | - | chr3_3:11623416-11623435 | Msa0442190:intron | 15.0% |
| !!! | CTTAGTTTTATATGAAAATA+GGG | - | chr3_3:11623417-11623436 | Msa0442190:intron | 15.0% |
| !! | TGCATTAAATTAACAAAAAA+TGG | + | chr3_3:11623805-11623824 | None:intergenic | 15.0% |
| !!! | ATTTTTTGTTAATTTAATGC+AGG | - | chr3_3:11623804-11623823 | Msa0442190:intron | 15.0% |
| !! | AAATAAAATCAAAGAACAAA+AGG | + | chr3_3:11623938-11623957 | None:intergenic | 15.0% |
| !!! | ATCAATTTTGTTTGTATGAT+GGG | - | chr3_3:11618755-11618774 | Msa0442190:CDS | 20.0% |
| !!! | ATTTCTGAAAATGACATAAT+TGG | - | chr3_3:11618879-11618898 | Msa0442190:intron | 20.0% |
| !!! | AAGTGAAATTTGATATTTTG+TGG | - | chr3_3:11619419-11619438 | Msa0442190:intron | 20.0% |
| !!! | AGTGAAATTTGATATTTTGT+GGG | - | chr3_3:11619420-11619439 | Msa0442190:intron | 20.0% |
| !!! | TATGAAAAATTGTTTTTCAG+AGG | - | chr3_3:11619448-11619467 | Msa0442190:intron | 20.0% |
| !! | CATAAATATCATAAGAAATG+CGG | - | chr3_3:11619511-11619530 | Msa0442190:intron | 20.0% |
| !!! | TTTTAGATTACTGTAAGAAA+GGG | - | chr3_3:11619572-11619591 | Msa0442190:intron | 20.0% |
| !!! | AATCATGATTTGTTAAGAAT+GGG | + | chr3_3:11620098-11620117 | None:intergenic | 20.0% |
| !! | GAAAATCTTGAATTATTGTT+CGG | + | chr3_3:11620261-11620280 | None:intergenic | 20.0% |
| !! | TATGACAAAAGAAATATGAT+TGG | - | chr3_3:11620294-11620313 | Msa0442190:intron | 20.0% |
| !! | AGGATTTATCTTAATGAATT+AGG | - | chr3_3:11620395-11620414 | Msa0442190:intron | 20.0% |
| !!! | ATTTTCAAAACGTAATTAGA+GGG | + | chr3_3:11621057-11621076 | None:intergenic | 20.0% |
| !!! | AATTTTCAAAACGTAATTAG+AGG | + | chr3_3:11621058-11621077 | None:intergenic | 20.0% |
| !!! | TCTTTTTCTATGTTTTTATG+TGG | - | chr3_3:11621385-11621404 | Msa0442190:intron | 20.0% |
| !!! | ATTTTTTTATCTCTTGTTAC+GGG | - | chr3_3:11621625-11621644 | Msa0442190:CDS | 20.0% |
| !! | ACACAAAGCTAAAAAAAAAA+TGG | + | chr3_3:11621751-11621770 | None:intergenic | 20.0% |
| !!! | TTTAATTTGTCTTACAAATC+AGG | - | chr3_3:11622770-11622789 | Msa0442190:intron | 20.0% |
| !! | TGTCTTTATAATTATCTATG+TGG | - | chr3_3:11623577-11623596 | Msa0442190:intron | 20.0% |
| !!! | ATTCTTGGTTTTTTACTTTG+TGG | - | chr3_3:11618727-11618746 | Msa0442190:CDS | 25.0% |
| !!! | TTCTTGGTTTTTTACTTTGT+GGG | - | chr3_3:11618728-11618747 | Msa0442190:CDS | 25.0% |
| !!! | GATCAATTTTGTTTGTATGA+TGG | - | chr3_3:11618754-11618773 | Msa0442190:CDS | 25.0% |
| ! | TTAACGTTAGGATTCATAAA+GGG | - | chr3_3:11619247-11619266 | Msa0442190:intron | 25.0% |
| ! | AATGTTGAGTCAACTAAATA+AGG | - | chr3_3:11619298-11619317 | Msa0442190:intron | 25.0% |
| ! | ATGTTGAGTCAACTAAATAA+GGG | - | chr3_3:11619299-11619318 | Msa0442190:intron | 25.0% |
| ! | TAAATAACTATGACATGACA+TGG | + | chr3_3:11619371-11619390 | None:intergenic | 25.0% |
| !! | GTAATCTAAAACGATACATA+CGG | + | chr3_3:11619563-11619582 | None:intergenic | 25.0% |
| !!! | GTTTTAGATTACTGTAAGAA+AGG | - | chr3_3:11619571-11619590 | Msa0442190:intron | 25.0% |
| ! | GCAGAAAAAACACTAAAAAA+TGG | + | chr3_3:11619898-11619917 | None:intergenic | 25.0% |
| !!! | ATTCTTAGTTTTCGATTTTG+TGG | - | chr3_3:11619920-11619939 | Msa0442190:intron | 25.0% |
| !!! | TTCTTAGTTTTCGATTTTGT+GGG | - | chr3_3:11619921-11619940 | Msa0442190:intron | 25.0% |
| !!! | GAATCATGATTTGTTAAGAA+TGG | + | chr3_3:11620099-11620118 | None:intergenic | 25.0% |
| ! | ATTTGATTCAGATTGTGAAT+CGG | - | chr3_3:11620121-11620140 | Msa0442190:CDS | 25.0% |
| ! | AGGGCAAAACATTATTATTA+GGG | + | chr3_3:11620532-11620551 | None:intergenic | 25.0% |
| ! | AAGGGCAAAACATTATTATT+AGG | + | chr3_3:11620533-11620552 | None:intergenic | 25.0% |
| !! | AATTAGTAGAGAAGTATACA+AGG | + | chr3_3:11620653-11620672 | None:intergenic | 25.0% |
| ! | GAAAACACATAAGAAAGTAA+AGG | + | chr3_3:11620716-11620735 | None:intergenic | 25.0% |
| !! | ATTAAAACAGCTTTTCAGTT+TGG | - | chr3_3:11620752-11620771 | Msa0442190:intron | 25.0% |
| !!! | TGCTTCTTTTATTTTGAAAC+TGG | - | chr3_3:11621669-11621688 | Msa0442190:CDS | 25.0% |
| ! | AGAAACAAATCATCTAAGAA+TGG | + | chr3_3:11621713-11621732 | None:intergenic | 25.0% |
| ! | ATATACTTTCCATTTATCTG+TGG | - | chr3_3:11622175-11622194 | Msa0442190:intron | 25.0% |
| ! | ACAATTGACATGAAATTTGA+TGG | - | chr3_3:11622270-11622289 | Msa0442190:intron | 25.0% |
| ! | TGTCAGTTACAAAAAGAAAA+AGG | + | chr3_3:11622655-11622674 | None:intergenic | 25.0% |
| !! | ATATCTGGAATAGTTTATTC+AGG | - | chr3_3:11622733-11622752 | Msa0442190:intron | 25.0% |
| ! | GTTACAAATAATAGATCACT+AGG | + | chr3_3:11623020-11623039 | None:intergenic | 25.0% |
| !! | AATTCAATGAATCCAACTTT+TGG | + | chr3_3:11623122-11623141 | None:intergenic | 25.0% |
| ! | ATACAAGATTATAAAGTAGC+AGG | - | chr3_3:11623200-11623219 | Msa0442190:intron | 25.0% |
| ! | TTGAAAAGACAACTAGAAAA+GGG | + | chr3_3:11623226-11623245 | None:intergenic | 25.0% |
| ! | TCATAAGTAGAATTTGAAAG+TGG | + | chr3_3:11623386-11623405 | None:intergenic | 25.0% |
| ! | TAATTTAATGCAGGTTTATC+AGG | - | chr3_3:11623813-11623832 | Msa0442190:intron | 25.0% |
| !! | AAGCTATGGATTATAATTCA+AGG | - | chr3_3:11624131-11624150 | Msa0442190:CDS | 25.0% |
| GAAGCACACTTACTTTAATT+TGG | + | chr3_3:11618658-11618677 | None:intergenic | 30.0% | |
| !!! | TGTGCTTCTCTTTGATTTTT+TGG | - | chr3_3:11618670-11618689 | Msa0442190:CDS | 30.0% |
| GCAGAAAAAACACTGAAAAT+TGG | + | chr3_3:11618705-11618724 | None:intergenic | 30.0% | |
| !!! | GTGTTTTTTCTGCAAATTCT+TGG | - | chr3_3:11618712-11618731 | Msa0442190:CDS | 30.0% |
| TTGGATGTTATCATATGTGT+TGG | - | chr3_3:11618898-11618917 | Msa0442190:intron | 30.0% | |
| TATGAAGCACAAATACTTCT+CGG | + | chr3_3:11618963-11618982 | None:intergenic | 30.0% | |
| !!! | GGTTTTGAATAGTTAACGTT+AGG | - | chr3_3:11619235-11619254 | Msa0442190:intron | 30.0% |
| GTTAACGTTAGGATTCATAA+AGG | - | chr3_3:11619246-11619265 | Msa0442190:intron | 30.0% | |
| TAACGTTAGGATTCATAAAG+GGG | - | chr3_3:11619248-11619267 | Msa0442190:intron | 30.0% | |
| TTAAAATTCGCTTAAATGGC+AGG | - | chr3_3:11619479-11619498 | Msa0442190:intron | 30.0% | |
| TAAAATTCGCTTAAATGGCA+GGG | - | chr3_3:11619480-11619499 | Msa0442190:intron | 30.0% | |
| AAGAAAGGGAATTGAGTATT+TGG | - | chr3_3:11619586-11619605 | Msa0442190:intron | 30.0% | |
| GAATTGAGTATTTGGTATTG+TGG | - | chr3_3:11619594-11619613 | Msa0442190:intron | 30.0% | |
| !!! | TGAATCGGAAACCTATTTTT+TGG | - | chr3_3:11620136-11620155 | Msa0442190:intron | 30.0% |
| ! | TGATTGGCTACAAAAAGTTT+AGG | - | chr3_3:11620310-11620329 | Msa0442190:intron | 30.0% |
| TGCTGTTATCTGAATGAATT+AGG | - | chr3_3:11620334-11620353 | Msa0442190:CDS | 30.0% | |
| TGAATCCAGATTCATTAAGA+TGG | + | chr3_3:11620362-11620381 | None:intergenic | 30.0% | |
| AGGTAATTGTAGATCGTAAA+TGG | - | chr3_3:11620870-11620889 | Msa0442190:intron | 30.0% | |
| AATTGTAGATCGTAAATGGA+AGG | - | chr3_3:11620874-11620893 | Msa0442190:intron | 30.0% | |
| AAAACGTAATTAGAGGGAAA+AGG | + | chr3_3:11621051-11621070 | None:intergenic | 30.0% | |
| CTACTATTGTAAGAAGTTAG+AGG | + | chr3_3:11621282-11621301 | None:intergenic | 30.0% | |
| ! | AATGATCATTTGTGATGGAA+TGG | - | chr3_3:11621357-11621376 | Msa0442190:intron | 30.0% |
| !! | CTATGTTTTTATGTGGTGTT+TGG | - | chr3_3:11621392-11621411 | Msa0442190:intron | 30.0% |
| GGATGTATAGTCAGTATTAT+TGG | + | chr3_3:11621530-11621549 | None:intergenic | 30.0% | |
| TTATGTGAAACCATGAATGA+TGG | + | chr3_3:11621551-11621570 | None:intergenic | 30.0% | |
| CTTTGTGTACATCTAATCTA+TGG | - | chr3_3:11621763-11621782 | Msa0442190:CDS | 30.0% | |
| !! | AGCTATTAGCTGTTTTCATT+AGG | + | chr3_3:11622013-11622032 | None:intergenic | 30.0% |
| TTTCCATTTATCTGTGGTAA+AGG | - | chr3_3:11622181-11622200 | Msa0442190:intron | 30.0% | |
| AAACCTTTACCACAGATAAA+TGG | + | chr3_3:11622187-11622206 | None:intergenic | 30.0% | |
| ATTGACATGAAATTTGATGG+CGG | - | chr3_3:11622273-11622292 | Msa0442190:intron | 30.0% | |
| TATATCGACCGAAATCAAAT+AGG | - | chr3_3:11622438-11622457 | Msa0442190:intron | 30.0% | |
| ! | TAACCACTCCTATTTGATTT+CGG | + | chr3_3:11622449-11622468 | None:intergenic | 30.0% |
| GAGCAATTAGTAGGAAAATT+GGG | - | chr3_3:11622529-11622548 | Msa0442190:intron | 30.0% | |
| AAAAAGAAAAAGGAATCTGC+AGG | + | chr3_3:11622645-11622664 | None:intergenic | 30.0% | |
| GTTTAATGACGATGAAATAG+AGG | - | chr3_3:11622691-11622710 | Msa0442190:intron | 30.0% | |
| ATGAAATAGAGGAAAAGGAA+AGG | - | chr3_3:11622702-11622721 | Msa0442190:intron | 30.0% | |
| GGAAAGGTTATTTGTATATC+TGG | - | chr3_3:11622718-11622737 | Msa0442190:intron | 30.0% | |
| AATAGTTTATTCAGGCACAT+AGG | - | chr3_3:11622741-11622760 | Msa0442190:intron | 30.0% | |
| TCATTAGATCACAAATGACA+AGG | + | chr3_3:11623097-11623116 | None:intergenic | 30.0% | |
| GATCTAATGAATCCAAAAGT+TGG | - | chr3_3:11623107-11623126 | Msa0442190:intron | 30.0% | |
| GTTGAAAAGACAACTAGAAA+AGG | + | chr3_3:11623227-11623246 | None:intergenic | 30.0% | |
| !! | AGACCTAACTATTTTTCTAC+TGG | - | chr3_3:11623283-11623302 | Msa0442190:intron | 30.0% |
| AAGCCAGTAGAAAAATAGTT+AGG | + | chr3_3:11623289-11623308 | None:intergenic | 30.0% | |
| AAAATAGGGCTGTAATAGTA+AGG | - | chr3_3:11623431-11623450 | Msa0442190:intron | 30.0% | |
| GCATAATGATGAGATATGAA+TGG | + | chr3_3:11623530-11623549 | None:intergenic | 30.0% | |
| ATGTTGAAGTACAAATCCAA+CGG | - | chr3_3:11623874-11623893 | Msa0442190:intron | 30.0% | |
| ATCAAAGAACAAAAGGTTTG+AGG | + | chr3_3:11623931-11623950 | None:intergenic | 30.0% | |
| ! | TAAGCTATCAGTTTTTCATG+GGG | + | chr3_3:11623984-11624003 | None:intergenic | 30.0% |
| ! | CTAAGCTATCAGTTTTTCAT+GGG | + | chr3_3:11623985-11624004 | None:intergenic | 30.0% |
| ! | TCTAAGCTATCAGTTTTTCA+TGG | + | chr3_3:11623986-11624005 | None:intergenic | 30.0% |
| TGAAAAACTGATAGCTTAGA+AGG | - | chr3_3:11623986-11624005 | Msa0442190:intron | 30.0% | |
| GAAAAACTGATAGCTTAGAA+GGG | - | chr3_3:11623987-11624006 | Msa0442190:intron | 30.0% | |
| TTGACATGTGGTGTAAATTA+TGG | - | chr3_3:11624017-11624036 | Msa0442190:CDS | 30.0% | |
| ! | GTTTTTCTTAGATCAGTGAA+TGG | - | chr3_3:11624087-11624106 | Msa0442190:CDS | 30.0% |
| !!! | CTCTCACACTGATTTTGATT+TGG | + | chr3_3:11618513-11618532 | None:intergenic | 35.0% |
| ! | GAAAAGATCGAAGCTTTTGT+TGG | + | chr3_3:11618620-11618639 | None:intergenic | 35.0% |
| TCAGTGTCTGTGTATTTCAT+AGG | + | chr3_3:11618835-11618854 | None:intergenic | 35.0% | |
| ! | TCAATTAAGCTAGGCCTTAT+GGG | + | chr3_3:11619069-11619088 | None:intergenic | 35.0% |
| TGGATTTGACAATTGTGCAA+CGG | + | chr3_3:11619351-11619370 | None:intergenic | 35.0% | |
| TTTACTGACACGTGTAAATG+AGG | - | chr3_3:11619387-11619406 | Msa0442190:intron | 35.0% | |
| TTACTGACACGTGTAAATGA+GGG | - | chr3_3:11619388-11619407 | Msa0442190:intron | 35.0% | |
| !!! | CTGGTTACTTGTCATTTTTC+TGG | + | chr3_3:11619640-11619659 | None:intergenic | 35.0% |
| ! | ATTGAAGTTTTTCCCAGAAG+AGG | + | chr3_3:11619752-11619771 | None:intergenic | 35.0% |
| ! | CAATCTTTTCATGATTCGCT+TGG | - | chr3_3:11619768-11619787 | Msa0442190:intron | 35.0% |
| AACAAGCTGTGGTACAAAAA+GGG | + | chr3_3:11619843-11619862 | None:intergenic | 35.0% | |
| ! | AGTTTTCGATTTTGTGGGTT+AGG | - | chr3_3:11619926-11619945 | Msa0442190:intron | 35.0% |
| CGATTCACAGTCCAAAAAAT+AGG | + | chr3_3:11620150-11620169 | None:intergenic | 35.0% | |
| AGGATCCATCTTAATGAATC+TGG | - | chr3_3:11620354-11620373 | Msa0442190:CDS | 35.0% | |
| AGGATTCATCTTCATGAATC+TGG | - | chr3_3:11620415-11620434 | Msa0442190:intron | 35.0% | |
| GAATCCTACACAAACACAAA+GGG | + | chr3_3:11620551-11620570 | None:intergenic | 35.0% | |
| TTGTGTAGGATTCCTACTAT+AGG | - | chr3_3:11620558-11620577 | Msa0442190:intron | 35.0% | |
| TGTGTAGGATTCCTACTATA+GGG | - | chr3_3:11620559-11620578 | Msa0442190:intron | 35.0% | |
| CATGTATGTTTCATGAGACA+AGG | + | chr3_3:11620690-11620709 | None:intergenic | 35.0% | |
| GTGATAAAGCAACGATAGAT+AGG | + | chr3_3:11620963-11620982 | None:intergenic | 35.0% | |
| GGATAGAGGAAATTATTGAG+TGG | + | chr3_3:11621091-11621110 | None:intergenic | 35.0% | |
| CAATAGCTTCACAACCAATA+CGG | - | chr3_3:11621135-11621154 | Msa0442190:intron | 35.0% | |
| TATCAATGATTCACCTGTTC+AGG | - | chr3_3:11621168-11621187 | Msa0442190:intron | 35.0% | |
| ATCAATGATTCACCTGTTCA+GGG | - | chr3_3:11621169-11621188 | Msa0442190:intron | 35.0% | |
| ACAATAGTAGTAGCAGAGAT+AGG | - | chr3_3:11621292-11621311 | Msa0442190:intron | 35.0% | |
| CAATAGTAGTAGCAGAGATA+GGG | - | chr3_3:11621293-11621312 | Msa0442190:intron | 35.0% | |
| AATAGTAGTAGCAGAGATAG+GGG | - | chr3_3:11621294-11621313 | Msa0442190:intron | 35.0% | |
| GGATCAATGATCATTTGTGA+TGG | - | chr3_3:11621352-11621371 | Msa0442190:intron | 35.0% | |
| ! | ATCATTTGTGATGGAATGGT+TGG | - | chr3_3:11621361-11621380 | Msa0442190:intron | 35.0% |
| !! | TCGGGTTATAGTCTTATTGT+CGG | + | chr3_3:11621443-11621462 | None:intergenic | 35.0% |
| ATGTAACCTGTTAGCTCATT+CGG | + | chr3_3:11621462-11621481 | None:intergenic | 35.0% | |
| GACTATACATCCATCATTCA+TGG | - | chr3_3:11621538-11621557 | Msa0442190:intron | 35.0% | |
| ! | ATCCAAAGCTTTATCACACT+AGG | + | chr3_3:11621860-11621879 | None:intergenic | 35.0% |
| ATTTACTGCCATAAGCACAT+AGG | - | chr3_3:11621896-11621915 | Msa0442190:intron | 35.0% | |
| TTTACTGCCATAAGCACATA+GGG | - | chr3_3:11621897-11621916 | Msa0442190:intron | 35.0% | |
| TAGGTATCTTGGAGAGTTTA+AGG | + | chr3_3:11621994-11622013 | None:intergenic | 35.0% | |
| !! | GCTGTTTTCATTAGGTATCT+TGG | + | chr3_3:11622005-11622024 | None:intergenic | 35.0% |
| ACATAGATTAGGACTCTGTT+TGG | + | chr3_3:11622145-11622164 | None:intergenic | 35.0% | |
| AACAGAGTCCTAATCTATGT+TGG | - | chr3_3:11622145-11622164 | Msa0442190:intron | 35.0% | |
| ! | TCCTAATCTATGTTGGTAAG+TGG | - | chr3_3:11622152-11622171 | Msa0442190:intron | 35.0% |
| TCCACTTACCAACATAGATT+AGG | + | chr3_3:11622156-11622175 | None:intergenic | 35.0% | |
| !! | TGATGGCGGATATATAGTTA+CGG | - | chr3_3:11622287-11622306 | Msa0442190:intron | 35.0% |
| CATTGCTTGAAACATGATAC+AGG | + | chr3_3:11622344-11622363 | None:intergenic | 35.0% | |
| TGTTTCAAGCAATGCATCTA+AGG | - | chr3_3:11622350-11622369 | Msa0442190:intron | 35.0% | |
| GTTTCAAGCAATGCATCTAA+GGG | - | chr3_3:11622351-11622370 | Msa0442190:intron | 35.0% | |
| TCTAAGGGTTCTTCTATTGA+AGG | - | chr3_3:11622366-11622385 | Msa0442190:intron | 35.0% | |
| ! | TTTTTGCTGAGAATTATGCC+AGG | - | chr3_3:11622478-11622497 | Msa0442190:intron | 35.0% |
| GGAGCAATTAGTAGGAAAAT+TGG | - | chr3_3:11622528-11622547 | Msa0442190:intron | 35.0% | |
| CAATACTCTGACTACATCAA+CGG | + | chr3_3:11622611-11622630 | None:intergenic | 35.0% | |
| ! | GTAACTGACATATTTTCCTC+TGG | - | chr3_3:11622665-11622684 | Msa0442190:intron | 35.0% |
| TGACGATGAAATAGAGGAAA+AGG | - | chr3_3:11622697-11622716 | Msa0442190:intron | 35.0% | |
| TCAGATTTGCAAACTATGCT+AGG | - | chr3_3:11622899-11622918 | Msa0442190:intron | 35.0% | |
| ACAAATGACAAGGAACATCA+AGG | + | chr3_3:11623087-11623106 | None:intergenic | 35.0% | |
| ATATACACTGTAAAGCCTGT+GGG | + | chr3_3:11623263-11623282 | None:intergenic | 35.0% | |
| TATATACACTGTAAAGCCTG+TGG | + | chr3_3:11623264-11623283 | None:intergenic | 35.0% | |
| !!! | TTTTCTACTGGCTTCTTAAG+AGG | - | chr3_3:11623295-11623314 | Msa0442190:intron | 35.0% |
| GACCTACGTCAAGAAATATT+AGG | - | chr3_3:11623340-11623359 | Msa0442190:intron | 35.0% | |
| CTCCTAATATTTCTTGACGT+AGG | + | chr3_3:11623345-11623364 | None:intergenic | 35.0% | |
| CTACGTCAAGAAATATTAGG+AGG | - | chr3_3:11623343-11623362 | Msa0442190:intron | 35.0% | |
| TGAGAGGTAAAGAAAGATAC+AGG | - | chr3_3:11623845-11623864 | Msa0442190:intron | 35.0% | |
| GAGAGGTAAAGAAAGATACA+GGG | - | chr3_3:11623846-11623865 | Msa0442190:intron | 35.0% | |
| ACATGTGGTGTAAATTATGG+CGG | - | chr3_3:11624020-11624039 | Msa0442190:CDS | 35.0% | |
| TCTTAGCACATGATAAGCTA+TGG | - | chr3_3:11624117-11624136 | Msa0442190:CDS | 35.0% | |
| AACAAGATCAGAGTAAGGTG+CGG | + | chr3_3:11618580-11618599 | None:intergenic | 40.0% | |
| TCACGAACAAGATCAGAGTA+AGG | + | chr3_3:11618585-11618604 | None:intergenic | 40.0% | |
| ! | CGATCTTTTCATGATTCGCT+TGG | - | chr3_3:11618630-11618649 | Msa0442190:three_prime_UTR | 40.0% |
| !! | CATATGTGTTGGTGTTGTGT+TGG | - | chr3_3:11618909-11618928 | Msa0442190:intron | 40.0% |
| !! | TGTTGGTGTTGTGTTGGTTT+CGG | - | chr3_3:11618915-11618934 | Msa0442190:intron | 40.0% |
| GCACAAATACTTCTCGGATT+AGG | + | chr3_3:11618957-11618976 | None:intergenic | 40.0% | |
| !! | TAGAGAGCATTTGCTTGTGT+TGG | - | chr3_3:11618992-11619011 | Msa0442190:intron | 40.0% |
| TATACAATGCTCTGCCCATA+AGG | - | chr3_3:11619052-11619071 | Msa0442190:intron | 40.0% | |
| GTCAATTAAGCTAGGCCTTA+TGG | + | chr3_3:11619070-11619089 | None:intergenic | 40.0% | |
| CCTAGCTTAATTGACAATGC+CGG | - | chr3_3:11619075-11619094 | Msa0442190:intron | 40.0% | |
| TATTGCTAGGCTAGATACCT+TGG | - | chr3_3:11619098-11619117 | Msa0442190:intron | 40.0% | |
| ! | AGTGCCAAGGGTTCTTATTT+CGG | + | chr3_3:11619145-11619164 | None:intergenic | 40.0% |
| TTAGTCCTATCCGGTTCAAA+GGG | + | chr3_3:11619202-11619221 | None:intergenic | 40.0% | |
| ATTAGTCCTATCCGGTTCAA+AGG | + | chr3_3:11619203-11619222 | None:intergenic | 40.0% | |
| !! | AATCAGGGATTAGTCCTATC+CGG | + | chr3_3:11619211-11619230 | None:intergenic | 40.0% |
| GATAGGACTAATCCCTGATT+CGG | - | chr3_3:11619211-11619230 | Msa0442190:intron | 40.0% | |
| TATTCAAAACCGCCGAATCA+GGG | + | chr3_3:11619226-11619245 | None:intergenic | 40.0% | |
| !!! | GCGGATTTTGGTTTTGATTC+TGG | + | chr3_3:11619659-11619678 | None:intergenic | 40.0% |
| GAACAAGCTGTGGTACAAAA+AGG | + | chr3_3:11619844-11619863 | None:intergenic | 40.0% | |
| GGATTCATGTCTTGTGAAAC+AGG | - | chr3_3:11620375-11620394 | Msa0442190:CDS | 40.0% | |
| ! | ATCGCTGTGTGTAGCATTTT+TGG | + | chr3_3:11620449-11620468 | None:intergenic | 40.0% |
| TTTGCCCTTTGTGTTTGTGT+AGG | - | chr3_3:11620544-11620563 | Msa0442190:intron | 40.0% | |
| GGAATCCTACACAAACACAA+AGG | + | chr3_3:11620552-11620571 | None:intergenic | 40.0% | |
| GTGTAGGATTCCTACTATAG+GGG | - | chr3_3:11620560-11620579 | Msa0442190:intron | 40.0% | |
| TGTAGGATTCCTACTATAGG+GGG | - | chr3_3:11620561-11620580 | Msa0442190:intron | 40.0% | |
| ! | GAGATGTTACTTCAACGAAG+AGG | + | chr3_3:11620608-11620627 | None:intergenic | 40.0% |
| TTCGTTGAAGTAACATCTCG+TGG | - | chr3_3:11620609-11620628 | Msa0442190:intron | 40.0% | |
| ! | ATCTCGTGGTGGTATTGAAA+AGG | - | chr3_3:11620623-11620642 | Msa0442190:intron | 40.0% |
| TGTAGATCGTAAATGGAAGG+AGG | - | chr3_3:11620877-11620896 | Msa0442190:intron | 40.0% | |
| !! | ATGCGCTTGTTATGGTATCT+CGG | + | chr3_3:11620922-11620941 | None:intergenic | 40.0% |
| ! | CATGAATGATGCGCTTGTTA+TGG | + | chr3_3:11620930-11620949 | None:intergenic | 40.0% |
| CATAACAAGCGCATCATTCA+TGG | - | chr3_3:11620928-11620947 | Msa0442190:intron | 40.0% | |
| AGGTAGTATCTTCACTAACC+AGG | + | chr3_3:11621031-11621050 | None:intergenic | 40.0% | |
| !! | CGTATTGGTTGTGAAGCTAT+TGG | + | chr3_3:11621137-11621156 | None:intergenic | 40.0% |
| !! | TTCATTGACTTACCCTGAAC+AGG | + | chr3_3:11621184-11621203 | None:intergenic | 40.0% |
| TGTTCCTCTGACATTTGTCA+TGG | - | chr3_3:11621331-11621350 | Msa0442190:intron | 40.0% | |
| TGATCCATGACAAATGTCAG+AGG | + | chr3_3:11621338-11621357 | None:intergenic | 40.0% | |
| TATAACCCGAATGAGCTAAC+AGG | - | chr3_3:11621453-11621472 | Msa0442190:intron | 40.0% | |
| TGTAACCTGTTAGCTCATTC+GGG | + | chr3_3:11621461-11621480 | None:intergenic | 40.0% | |
| GAATGAGCTAACAGGTTACA+TGG | - | chr3_3:11621461-11621480 | Msa0442190:intron | 40.0% | |
| ! | AAGCTTTATCACACTAGGTG+AGG | + | chr3_3:11621855-11621874 | None:intergenic | 40.0% |
| CACCTAGTGTGATAAAGCTT+TGG | - | chr3_3:11621855-11621874 | Msa0442190:intron | 40.0% | |
| TTACTGCCATAAGCACATAG+GGG | - | chr3_3:11621898-11621917 | Msa0442190:intron | 40.0% | |
| TTGGGAGAGCTTATGGAAAT+TGG | - | chr3_3:11621926-11621945 | Msa0442190:intron | 40.0% | |
| ATATATAGTTACGGTGGACC+TGG | - | chr3_3:11622296-11622315 | Msa0442190:intron | 40.0% | |
| TATATAGTTACGGTGGACCT+GGG | - | chr3_3:11622297-11622316 | Msa0442190:intron | 40.0% | |
| TTCCTACTAATTGCTCCTTG+TGG | + | chr3_3:11622525-11622544 | None:intergenic | 40.0% | |
| AAGTCTATACCTGTCTTGCT+GGG | + | chr3_3:11622578-11622597 | None:intergenic | 40.0% | |
| ATCGTCATTAAACAAGCCAG+AGG | + | chr3_3:11622684-11622703 | None:intergenic | 40.0% | |
| !!! | CTACCATTTTTTGCTATCCG+CGG | - | chr3_3:11622979-11622998 | Msa0442190:intron | 40.0% |
| TTGTTGTCAGAGTGTGTGAA+AGG | - | chr3_3:11623161-11623180 | Msa0442190:intron | 40.0% | |
| GTGTGAAAGGAAGGATGTTA+AGG | - | chr3_3:11623174-11623193 | Msa0442190:intron | 40.0% | |
| !! | GTCGTAGACTATTTCTACAG+GGG | + | chr3_3:11623323-11623342 | None:intergenic | 40.0% |
| !! | GGTCGTAGACTATTTCTACA+GGG | + | chr3_3:11623324-11623343 | None:intergenic | 40.0% |
| !! | AGGTCGTAGACTATTTCTAC+AGG | + | chr3_3:11623325-11623344 | None:intergenic | 40.0% |
| GAAACTAACATCGCACAAAG+TGG | + | chr3_3:11623552-11623571 | None:intergenic | 40.0% | |
| TCTATGTGGTGAGATGTGAT+TGG | - | chr3_3:11623591-11623610 | Msa0442190:intron | 40.0% | |
| TGCAGGTTTATCAGGAGAAA+AGG | - | chr3_3:11623821-11623840 | Msa0442190:intron | 40.0% | |
| TATCAGGAGAAAAGGTTGAG+AGG | - | chr3_3:11623829-11623848 | Msa0442190:intron | 40.0% | |
| TTCCATATAAGAGTCCACTG+AGG | + | chr3_3:11623907-11623926 | None:intergenic | 40.0% | |
| ! | AAGGGTAGCTTTTTGACATG+TGG | - | chr3_3:11624005-11624024 | Msa0442190:CDS | 40.0% |
| GGCAGCAACTAAGTGATACT+GGG | + | chr3_3:11618814-11618833 | None:intergenic | 45.0% | |
| AGGCAGCAACTAAGTGATAC+TGG | + | chr3_3:11618815-11618834 | None:intergenic | 45.0% | |
| CCGGCATTGTCAATTAAGCT+AGG | + | chr3_3:11619078-11619097 | None:intergenic | 45.0% | |
| TTGACAATGCCGGTATTGCT+AGG | - | chr3_3:11619085-11619104 | Msa0442190:intron | 45.0% | |
| GGTATCTAGCCTAGCAATAC+CGG | + | chr3_3:11619097-11619116 | None:intergenic | 45.0% | |
| ! | CCAAGGGTTCTTATTTCGGT+GGG | + | chr3_3:11619141-11619160 | None:intergenic | 45.0% |
| CTATTCAAAACCGCCGAATC+AGG | + | chr3_3:11619227-11619246 | None:intergenic | 45.0% | |
| TTTGTGAGTTCAGTCTCACG+CGG | + | chr3_3:11619678-11619697 | None:intergenic | 45.0% | |
| AACAAGGTCAGAGTAGAGAG+CGG | + | chr3_3:11619718-11619737 | None:intergenic | 45.0% | |
| AGAGGTTAGCATCACGAACA+AGG | + | chr3_3:11619734-11619753 | None:intergenic | 45.0% | |
| TTCGTGATGCTAACCTCTTC+TGG | - | chr3_3:11619736-11619755 | Msa0442190:intron | 45.0% | |
| TCGTGATGCTAACCTCTTCT+GGG | - | chr3_3:11619737-11619756 | Msa0442190:intron | 45.0% | |
| CTAGATCGATGAACAAGCTG+TGG | + | chr3_3:11619854-11619873 | None:intergenic | 45.0% | |
| GTTGAAGTAACATCTCGTGG+TGG | - | chr3_3:11620612-11620631 | Msa0442190:intron | 45.0% | |
| !! | CTTCACTAACCAGGTGTTGA+GGG | + | chr3_3:11621022-11621041 | None:intergenic | 45.0% |
| ! | TCTTCACTAACCAGGTGTTG+AGG | + | chr3_3:11621023-11621042 | None:intergenic | 45.0% |
| ! | CACTCAAAGCATCTGGATAG+AGG | + | chr3_3:11621105-11621124 | None:intergenic | 45.0% |
| ! | CTCTATCCAGATGCTTTGAG+TGG | - | chr3_3:11621103-11621122 | Msa0442190:intron | 45.0% |
| ! | ACGTTTCCACTCAAAGCATC+TGG | + | chr3_3:11621112-11621131 | None:intergenic | 45.0% |
| AGCTTCACAACCAATACGGA+CGG | - | chr3_3:11621139-11621158 | Msa0442190:intron | 45.0% | |
| CCAGCTACTTAGATCAAACG+AGG | + | chr3_3:11621832-11621851 | None:intergenic | 45.0% | |
| CCTCGTTTGATCTAAGTAGC+TGG | - | chr3_3:11621829-11621848 | Msa0442190:intron | 45.0% | |
| AACAGTCCCCTATGTGCTTA+TGG | + | chr3_3:11621907-11621926 | None:intergenic | 45.0% | |
| TAAGCACATAGGGGACTGTT+TGG | - | chr3_3:11621907-11621926 | Msa0442190:intron | 45.0% | |
| AAGCACATAGGGGACTGTTT+GGG | - | chr3_3:11621908-11621927 | Msa0442190:intron | 45.0% | |
| AGTGTCTGTGCTGGACTAAT+TGG | + | chr3_3:11622231-11622250 | None:intergenic | 45.0% | |
| ATTAGTCCAGCACAGACACT+TGG | - | chr3_3:11622231-11622250 | Msa0442190:intron | 45.0% | |
| ! | TGGCGGATATATAGTTACGG+TGG | - | chr3_3:11622290-11622309 | Msa0442190:intron | 45.0% |
| CGACCGAAATCAAATAGGAG+TGG | - | chr3_3:11622443-11622462 | Msa0442190:intron | 45.0% | |
| GTAGGAAAATTGGGTTTGCG+TGG | - | chr3_3:11622538-11622557 | Msa0442190:intron | 45.0% | |
| CAAGTCTATACCTGTCTTGC+TGG | + | chr3_3:11622579-11622598 | None:intergenic | 45.0% | |
| CAACCGCGGATAGCAAAAAA+TGG | + | chr3_3:11622985-11623004 | None:intergenic | 45.0% | |
| !!! | CATTTTTTGCTATCCGCGGT+TGG | - | chr3_3:11622983-11623002 | Msa0442190:intron | 45.0% |
| GTTTCGCAAATGACAGGCTA+AGG | + | chr3_3:11623062-11623081 | None:intergenic | 45.0% | |
| AAGGCAGTTTCGCAAATGAC+AGG | + | chr3_3:11623068-11623087 | None:intergenic | 45.0% | |
| TGTCAGAGTGTGTGAAAGGA+AGG | - | chr3_3:11623165-11623184 | Msa0442190:intron | 45.0% | |
| ! | ACATTTGAGATTGCTCCCAC+AGG | - | chr3_3:11623245-11623264 | Msa0442190:intron | 45.0% |
| ! | CTCCTCAGTGGACTCTTATA+TGG | - | chr3_3:11623902-11623921 | Msa0442190:intron | 45.0% |
| !!! | ATTTAAAAATTGAATTTTTT+TGG | - | chr3_3:11619019-11619038 | Msa0442190:intron | 5.0% |
| AGATCAGAGTAAGGTGCGGT+TGG | + | chr3_3:11618576-11618595 | None:intergenic | 50.0% | |
| TTCGAACTCAGGTGAAGCCA+AGG | + | chr3_3:11619118-11619137 | None:intergenic | 50.0% | |
| ! | ATTTCGGTGGGTTCGAACTC+AGG | + | chr3_3:11619129-11619148 | None:intergenic | 50.0% |
| CCCACCGAAATAAGAACCCT+TGG | - | chr3_3:11619138-11619157 | Msa0442190:intron | 50.0% | |
| ! | GCCAAGGGTTCTTATTTCGG+TGG | + | chr3_3:11619142-11619161 | None:intergenic | 50.0% |
| GTGGACTCATCAAGTGCCAA+GGG | + | chr3_3:11619157-11619176 | None:intergenic | 50.0% | |
| ! | AGTGGACTCATCAAGTGCCA+AGG | + | chr3_3:11619158-11619177 | None:intergenic | 50.0% |
| AAGCTGTGGGATAACCAGAG+TGG | + | chr3_3:11619176-11619195 | None:intergenic | 50.0% | |
| GTTCAAAGGGCTGAAGCTGT+GGG | + | chr3_3:11619189-11619208 | None:intergenic | 50.0% | |
| ACAGCTTCAGCCCTTTGAAC+CGG | - | chr3_3:11619189-11619208 | Msa0442190:intron | 50.0% | |
| TTCAGCCCTTTGAACCGGAT+AGG | - | chr3_3:11619194-11619213 | Msa0442190:intron | 50.0% | |
| !! | AGGACTAATCCCTGATTCGG+CGG | - | chr3_3:11619214-11619233 | Msa0442190:intron | 50.0% |
| ! | GTTCAGTCTCACGCGGATTT+TGG | + | chr3_3:11619671-11619690 | None:intergenic | 50.0% |
| AGTGGCTTACCCCCTATAGT+AGG | + | chr3_3:11620573-11620592 | None:intergenic | 50.0% | |
| AAGAGGTGATGCAGGTCTAG+TGG | + | chr3_3:11620591-11620610 | None:intergenic | 50.0% | |
| CTTCAACGAAGAGGTGATGC+AGG | + | chr3_3:11620599-11620618 | None:intergenic | 50.0% | |
| !! | ACTAACCAGGTGTTGAGGGA+GGG | + | chr3_3:11621018-11621037 | None:intergenic | 50.0% |
| GGACTGTTTGGGAGAGCTTA+TGG | - | chr3_3:11621919-11621938 | Msa0442190:intron | 50.0% | |
| GAAGAACCAAGTGTCTGTGC+TGG | + | chr3_3:11622240-11622259 | None:intergenic | 50.0% | |
| ! | ACACTTGGTTCTTCAGTGCG+TGG | - | chr3_3:11622246-11622265 | Msa0442190:intron | 50.0% |
| CTTTCAGCTGTTCAGAACCC+AGG | + | chr3_3:11622317-11622336 | None:intergenic | 50.0% | |
| !! | CTGGGTTCTGAACAGCTGAA+AGG | - | chr3_3:11622315-11622334 | Msa0442190:intron | 50.0% |
| ! | GCAAAATGAGGGCTTTAGCC+TGG | + | chr3_3:11622499-11622518 | None:intergenic | 50.0% |
| ! | GGCTAAAGCCCTCATTTTGC+AGG | - | chr3_3:11622499-11622518 | Msa0442190:intron | 50.0% |
| CCTTGTGGCCTGCAAAATGA+GGG | + | chr3_3:11622510-11622529 | None:intergenic | 50.0% | |
| TCCTTGTGGCCTGCAAAATG+AGG | + | chr3_3:11622511-11622530 | None:intergenic | 50.0% | |
| GGCCACAAGGAGCAATTAGT+AGG | - | chr3_3:11622520-11622539 | Msa0442190:intron | 50.0% | |
| GGAAAATTGGGTTTGCGTGG+AGG | - | chr3_3:11622541-11622560 | Msa0442190:intron | 50.0% | |
| GTGCGGTTGGAGGAGGATAA+GGG | + | chr3_3:11618563-11618582 | None:intergenic | 55.0% | |
| TCAGAGTAAGGTGCGGTTGG+AGG | + | chr3_3:11618573-11618592 | None:intergenic | 55.0% | |
| GGCACTTGATGAGTCCACTC+TGG | - | chr3_3:11619159-11619178 | Msa0442190:intron | 55.0% | |
| GGTTCAAAGGGCTGAAGCTG+TGG | + | chr3_3:11619190-11619209 | None:intergenic | 55.0% | |
| TCAGAGTAGAGAGCGGTTGG+AGG | + | chr3_3:11619711-11619730 | None:intergenic | 55.0% | |
| AGGTCAGAGTAGAGAGCGGT+TGG | + | chr3_3:11619714-11619733 | None:intergenic | 55.0% | |
| !! | CACTAACCAGGTGTTGAGGG+AGG | + | chr3_3:11621019-11621038 | None:intergenic | 55.0% |
| GATAGCAGCACCGTCCGTAT+TGG | + | chr3_3:11621152-11621171 | None:intergenic | 55.0% | |
| ! | CCCTCATTTTGCAGGCCACA+AGG | - | chr3_3:11622507-11622526 | Msa0442190:intron | 55.0% |
| TCTGACAGACCCAGCAAGAC+AGG | - | chr3_3:11622566-11622585 | Msa0442190:intron | 55.0% | |
| GGAATCAGTGTTGCCAACCG+CGG | + | chr3_3:11622999-11623018 | None:intergenic | 55.0% | |
| GGTGCGGTTGGAGGAGGATA+AGG | + | chr3_3:11618564-11618583 | None:intergenic | 60.0% | |
| GAGTAAGGTGCGGTTGGAGG+AGG | + | chr3_3:11618570-11618589 | None:intergenic | 60.0% | |
| TGTGCAACGGTCACGTGTGC+AGG | + | chr3_3:11619338-11619357 | None:intergenic | 60.0% | |
| GAGCGGTTGGAGGAGGACAA+AGG | + | chr3_3:11619701-11619720 | None:intergenic | 60.0% | |
| GAGTAGAGAGCGGTTGGAGG+AGG | + | chr3_3:11619708-11619727 | None:intergenic | 60.0% | |
| CAAGTCCCTCCCTCAACACC+TGG | - | chr3_3:11621010-11621029 | Msa0442190:intron | 60.0% | |
| GCTATTGCGCTGCTGCGTAG+CGG | - | chr3_3:11622944-11622963 | Msa0442190:intron | 60.0% | |
| CCACTGAGGAGCTGAACCGT+TGG | + | chr3_3:11623893-11623912 | None:intergenic | 60.0% | |
| CCAACGGTTCAGCTCCTCAG+TGG | - | chr3_3:11623890-11623909 | Msa0442190:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 11618480 | 11624174 | 11618480 | ID=Msa0442190;Name=Msa0442190 |
| chr3_3 | mRNA | 11618480 | 11624174 | 11618480 | ID=Msa0442190-mRNA-1;Parent=Msa0442190;Name=Msa0442190-mRNA-1;_AED=0.23;_eAED=0.23;_QI=0|0.5|0.42|1|0.5|0.42|7|178|265 |
| chr3_3 | exon | 11618480 | 11618828 | 11618480 | ID=Msa0442190-mRNA-1:exon:2474;Parent=Msa0442190-mRNA-1 |
| chr3_3 | exon | 11620067 | 11620154 | 11620067 | ID=Msa0442190-mRNA-1:exon:2473;Parent=Msa0442190-mRNA-1 |
| chr3_3 | exon | 11620311 | 11620413 | 11620311 | ID=Msa0442190-mRNA-1:exon:2472;Parent=Msa0442190-mRNA-1 |
| chr3_3 | exon | 11621464 | 11621541 | 11621464 | ID=Msa0442190-mRNA-1:exon:2471;Parent=Msa0442190-mRNA-1 |
| chr3_3 | exon | 11621623 | 11621782 | 11621623 | ID=Msa0442190-mRNA-1:exon:2470;Parent=Msa0442190-mRNA-1 |
| chr3_3 | exon | 11622010 | 11622035 | 11622010 | ID=Msa0442190-mRNA-1:exon:2469;Parent=Msa0442190-mRNA-1 |
| chr3_3 | exon | 11624003 | 11624174 | 11624003 | ID=Msa0442190-mRNA-1:exon:2468;Parent=Msa0442190-mRNA-1 |
| chr3_3 | CDS | 11624003 | 11624174 | 11624003 | ID=Msa0442190-mRNA-1:cds;Parent=Msa0442190-mRNA-1 |
| chr3_3 | CDS | 11622010 | 11622035 | 11622010 | ID=Msa0442190-mRNA-1:cds;Parent=Msa0442190-mRNA-1 |
| chr3_3 | CDS | 11621623 | 11621782 | 11621623 | ID=Msa0442190-mRNA-1:cds;Parent=Msa0442190-mRNA-1 |
| chr3_3 | CDS | 11621464 | 11621541 | 11621464 | ID=Msa0442190-mRNA-1:cds;Parent=Msa0442190-mRNA-1 |
| chr3_3 | CDS | 11620311 | 11620413 | 11620311 | ID=Msa0442190-mRNA-1:cds;Parent=Msa0442190-mRNA-1 |
| chr3_3 | CDS | 11620067 | 11620154 | 11620067 | ID=Msa0442190-mRNA-1:cds;Parent=Msa0442190-mRNA-1 |
| chr3_3 | CDS | 11618658 | 11618828 | 11618658 | ID=Msa0442190-mRNA-1:cds;Parent=Msa0442190-mRNA-1 |
| chr3_3 | three_prime_UTR | 11618480 | 11618657 | 11618480 | ID=Msa0442190-mRNA-1:three_prime_utr;Parent=Msa0442190-mRNA-1 |
| Gene Sequence |
| Protein sequence |
