Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0100240 | XP_003589217.1 | 89.094 | 541 | 34 | 4 | 1 | 540 | 1 | 517 | 0.0 | 942 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0100240 | sp|Q9FMN2|PAH2_ARATH | 78.346 | 254 | 48 | 2 | 285 | 538 | 679 | 925 | 3.38e-138 | 426 |
| Msa0100240 | sp|Q9FMN2|PAH2_ARATH | 42.424 | 198 | 102 | 4 | 1 | 195 | 1 | 189 | 1.18e-32 | 136 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0100240 | G7I3N3 | 89.094 | 541 | 34 | 4 | 1 | 540 | 1 | 517 | 0.0 | 942 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0029850 | Msa0100240 | 0.813894 | 2.031588e-51 | -8.615850e-47 |
| Msa0036140 | Msa0100240 | 0.803676 | 3.111709e-49 | -8.615850e-47 |
| Msa0077180 | Msa0100240 | 0.807646 | 4.566811e-50 | -8.615850e-47 |
| Msa0100240 | Msa0124550 | 0.800454 | 1.430323e-48 | -8.615850e-47 |
| Msa0100240 | Msa0137570 | 0.800492 | 1.405192e-48 | -8.615850e-47 |
| Msa0100240 | Msa0169820 | 0.811189 | 7.930503e-51 | -8.615850e-47 |
| Msa0100240 | Msa0265380 | 0.816323 | 5.866592e-52 | -8.615850e-47 |
| Msa0100240 | Msa0268090 | 0.821985 | 3.017979e-53 | -8.615850e-47 |
| Msa0100240 | Msa0292170 | 0.807869 | 4.093115e-50 | -8.615850e-47 |
| Msa0100240 | Msa0299730 | 0.800754 | 1.242549e-48 | -8.615850e-47 |
| Msa0100240 | Msa0303360 | 0.819559 | 1.089965e-52 | -8.615850e-47 |
| Msa0100240 | Msa0347610 | 0.808949 | 2.408334e-50 | -8.615850e-47 |
| Msa0100240 | Msa0388030 | -0.822991 | 1.761415e-53 | -8.615850e-47 |
| Msa0100240 | Msa0394340 | 0.819801 | 9.598282e-53 | -8.615850e-47 |
| Msa0100240 | Msa0412840 | 0.805442 | 1.332555e-49 | -8.615850e-47 |
| Msa0100240 | Msa0433410 | -0.802807 | 4.708603e-49 | -8.615850e-47 |
| Msa0100240 | Msa0457510 | 0.804350 | 2.253695e-49 | -8.615850e-47 |
| Msa0100240 | Msa0464900 | 0.829385 | 5.302018e-55 | -8.615850e-47 |
| Msa0100240 | Msa0468130 | 0.804069 | 2.578377e-49 | -8.615850e-47 |
| Msa0100240 | Msa0482190 | -0.824446 | 8.038568e-54 | -8.615850e-47 |
| Msa0100240 | Msa0485500 | -0.814764 | 1.304694e-51 | -8.615850e-47 |
| Msa0100240 | Msa0489610 | 0.814039 | 1.887546e-51 | -8.615850e-47 |
| Msa0100240 | Msa0545120 | 0.813888 | 2.037971e-51 | -8.615850e-47 |
| Msa0100240 | Msa0558690 | 0.800022 | 1.751534e-48 | -8.615850e-47 |
| Msa0100240 | Msa0579100 | 0.811372 | 7.234381e-51 | -8.615850e-47 |
| Msa0100240 | Msa0579130 | 0.802616 | 5.154559e-49 | -8.615850e-47 |
| Msa0100240 | Msa0579200 | 0.804382 | 2.218566e-49 | -8.615850e-47 |
| Msa0100240 | Msa0580000 | 0.803865 | 2.842971e-49 | -8.615850e-47 |
| Msa0100240 | Msa0587190 | 0.801638 | 8.191061e-49 | -8.615850e-47 |
| Msa0100240 | Msa0651270 | 0.818108 | 2.328356e-52 | -8.615850e-47 |
| Msa0100240 | Msa0654010 | 0.800397 | 1.469310e-48 | -8.615850e-47 |
| Msa0100240 | Msa0677080 | 0.807083 | 6.011403e-50 | -8.615850e-47 |
| Msa0100240 | Msa0696410 | 0.800242 | 1.579538e-48 | -8.615850e-47 |
| Msa0100240 | Msa0731180 | 0.804893 | 1.735577e-49 | -8.615850e-47 |
| Msa0100240 | Msa0749440 | 0.822603 | 2.168621e-53 | -8.615850e-47 |
| Msa0100240 | Msa0750950 | 0.824435 | 8.082565e-54 | -8.615850e-47 |
| Msa0100240 | Msa0751850 | 0.802317 | 5.941755e-49 | -8.615850e-47 |
| Msa0100240 | Msa0831150 | 0.846316 | 2.344814e-59 | -8.615850e-47 |
| Msa0100240 | Msa1006850 | 0.825534 | 4.447754e-54 | -8.615850e-47 |
| Msa0100240 | Msa1021510 | 0.807288 | 5.438704e-50 | -8.615850e-47 |
| Msa0100240 | Msa1079730 | -0.820752 | 5.810203e-53 | -8.615850e-47 |
| Msa0100240 | Msa1089040 | 0.808608 | 2.848958e-50 | -8.615850e-47 |
| Msa0100240 | Msa1102790 | 0.809977 | 1.449141e-50 | -8.615850e-47 |
| Msa0100240 | Msa1105500 | 0.811332 | 7.381595e-51 | -8.615850e-47 |
| Msa0100240 | Msa1124540 | -0.837005 | 6.708648e-57 | -8.615850e-47 |
| Msa0100240 | Msa1132390 | 0.824690 | 7.041210e-54 | -8.615850e-47 |
| Msa0100240 | Msa1132970 | 0.811415 | 7.081145e-51 | -8.615850e-47 |
| Msa0100240 | Msa1168040 | -0.834525 | 2.850170e-56 | -8.615850e-47 |
| Msa0100240 | Msa1174310 | 0.814599 | 1.419214e-51 | -8.615850e-47 |
| Msa0100240 | Msa1183100 | -0.803717 | 3.050512e-49 | -8.615850e-47 |
| Msa0100240 | Msa1219810 | 0.815493 | 8.986123e-52 | -8.615850e-47 |
| Msa0100240 | Msa1235400 | 0.819466 | 1.144650e-52 | -8.615850e-47 |
| Msa0100240 | Msa1258380 | -0.823715 | 1.193024e-53 | -8.615850e-47 |
| Msa0100240 | Msa1267060 | 0.825879 | 3.684860e-54 | -8.615850e-47 |
| Msa0100240 | Msa1267190 | 0.804584 | 2.013672e-49 | -8.615850e-47 |
| Msa0100240 | Msa1307550 | 0.803264 | 3.788054e-49 | -8.615850e-47 |
| Msa0100240 | Msa1314770 | 0.825163 | 5.443630e-54 | -8.615850e-47 |
| Msa0100240 | Msa1335710 | 0.931693 | 2.587325e-94 | -8.615850e-47 |
| Msa0100240 | Msa1371940 | 0.828341 | 9.487575e-55 | -8.615850e-47 |
| Msa0100240 | Msa1376130 | 0.812447 | 4.220976e-51 | -8.615850e-47 |
| Msa0100240 | Msa1376890 | 0.802443 | 5.597215e-49 | -8.615850e-47 |
| Msa0100240 | Msa1377570 | 0.818681 | 1.726535e-52 | -8.615850e-47 |
| Msa0100240 | Msa1397260 | 0.803221 | 3.865690e-49 | -8.615850e-47 |
| Msa0100240 | Msa1401530 | 0.831039 | 2.092435e-55 | -8.615850e-47 |
| Msa0100240 | Msa1404240 | -0.825002 | 5.942537e-54 | -8.615850e-47 |
| Msa0100240 | Msa1440940 | 0.802133 | 6.482723e-49 | -8.615850e-47 |
| Msa0100240 | Msa1444250 | -0.827684 | 1.365867e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0100240 | MtrunA17_Chr1g0153651 | 89.094 | 541 | 34 | 4 | 1 | 540 | 1 | 517 | 0.0 | 942 |
| Msa0100240 | MtrunA17_Chr3g0133821 | 77.947 | 263 | 51 | 2 | 276 | 538 | 572 | 827 | 2.22e-142 | 431 |
| Msa0100240 | MtrunA17_Chr3g0133821 | 50.242 | 207 | 67 | 9 | 1 | 198 | 1 | 180 | 1.42e-43 | 166 |
| Msa0100240 | MtrunA17_Chr7g0263401 | 71.756 | 262 | 66 | 3 | 278 | 538 | 608 | 862 | 2.30e-129 | 398 |
| Msa0100240 | MtrunA17_Chr7g0263401 | 58.242 | 91 | 35 | 2 | 1 | 91 | 1 | 88 | 3.42e-26 | 113 |
| Msa0100240 | MtrunA17_Chr1g0181991 | 72.800 | 250 | 61 | 2 | 289 | 538 | 678 | 920 | 8.48e-129 | 398 |
| Msa0100240 | MtrunA17_Chr1g0181991 | 60.440 | 91 | 33 | 2 | 1 | 91 | 1 | 88 | 2.64e-27 | 117 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0100240 | AT5G42870.1 | 78.346 | 254 | 48 | 2 | 285 | 538 | 679 | 925 | 3.43e-139 | 426 |
| Msa0100240 | AT5G42870.1 | 42.424 | 198 | 102 | 4 | 1 | 195 | 1 | 189 | 1.20e-33 | 136 |
| Msa0100240 | AT5G42870.2 | 77.559 | 254 | 45 | 3 | 285 | 538 | 679 | 920 | 6.63e-135 | 414 |
| Msa0100240 | AT5G42870.2 | 42.424 | 198 | 102 | 4 | 1 | 195 | 1 | 189 | 1.18e-33 | 136 |
| Msa0100240 | AT3G09560.3 | 72.619 | 252 | 63 | 1 | 287 | 538 | 654 | 899 | 3.78e-127 | 394 |
| Msa0100240 | AT3G09560.3 | 58.242 | 91 | 35 | 1 | 1 | 91 | 1 | 88 | 1.93e-27 | 117 |
| Msa0100240 | AT3G09560.1 | 72.619 | 252 | 63 | 1 | 287 | 538 | 654 | 899 | 3.78e-127 | 394 |
| Msa0100240 | AT3G09560.1 | 58.242 | 91 | 35 | 1 | 1 | 91 | 1 | 88 | 1.93e-27 | 117 |
| Msa0100240 | AT3G09560.2 | 72.619 | 252 | 63 | 1 | 287 | 538 | 654 | 899 | 3.78e-127 | 394 |
| Msa0100240 | AT3G09560.2 | 58.242 | 91 | 35 | 1 | 1 | 91 | 1 | 88 | 1.93e-27 | 117 |
| Msa0100240 | AT3G09560.4 | 72.619 | 252 | 63 | 1 | 287 | 538 | 654 | 899 | 3.78e-127 | 394 |
| Msa0100240 | AT3G09560.4 | 58.242 | 91 | 35 | 1 | 1 | 91 | 1 | 88 | 1.93e-27 | 117 |
| Msa0100240 | AT5G42870.3 | 81.683 | 202 | 37 | 0 | 285 | 486 | 679 | 880 | 1.87e-114 | 360 |
| Msa0100240 | AT5G42870.3 | 42.424 | 198 | 102 | 4 | 1 | 195 | 1 | 189 | 9.43e-34 | 137 |
Find 171 sgRNAs with CRISPR-Local
Find 418 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGCCAAGTTGTTGGATTTA+AGG | 0.119943 | 1_3:-6773525 | Msa0100240:CDS |
| ATTTCAATTCCTGGAATTTC+TGG | 0.157366 | 1_3:-6768942 | Msa0100240:CDS |
| CCCTCTTTCTAATAAATTAT+AGG | 0.199264 | 1_3:-6768913 | Msa0100240:exon |
| AAAGTTAGTGTTAGTGTTAA+TGG | 0.212940 | 1_3:-6773877 | Msa0100240:CDS |
| TCTCCTTGGTATGTTAGATT+TGG | 0.249156 | 1_3:-6773943 | Msa0100240:CDS |
| GTAGTCATGTCTAAGGTTTC+AGG | 0.260940 | 1_3:-6769194 | Msa0100240:intron |
| TTTCCAAAACCAGCATAAAA+AGG | 0.268711 | 1_3:+6769370 | None:intergenic |
| CCTCTTTCTAATAAATTATA+GGG | 0.269298 | 1_3:-6768912 | Msa0100240:exon |
| GTGTTGGTGGATTTATTTAT+TGG | 0.297689 | 1_3:-6768123 | Msa0100240:three_prime_UTR |
| CTCCTTGGTATGTTAGATTT+GGG | 0.306228 | 1_3:-6773942 | Msa0100240:CDS |
| ATTCAAAATTGCATGTTTAG+AGG | 0.306466 | 1_3:-6769513 | Msa0100240:intron |
| AAGTTAGTGTTAGTGTTAAT+GGG | 0.307172 | 1_3:-6773876 | Msa0100240:CDS |
| AGAATAAATAGATTTGTATT+GGG | 0.316446 | 1_3:-6773595 | Msa0100240:CDS |
| TGCAGGAGGATTTCAATTCC+TGG | 0.325571 | 1_3:-6768951 | Msa0100240:intron |
| TACTGATAAATGATTAATAA+TGG | 0.328676 | 1_3:+6774373 | None:intergenic |
| TGTGATGATATTCAACTTAG+AGG | 0.329282 | 1_3:-6773703 | Msa0100240:CDS |
| TCTCCCTTCCTTCAGATTCA+AGG | 0.332182 | 1_3:+6773054 | None:intergenic |
| TTCCACACATCACAGGAAAA+TGG | 0.342813 | 1_3:-6769936 | Msa0100240:intron |
| GAGAATAAATAGATTTGTAT+TGG | 0.343977 | 1_3:-6773596 | Msa0100240:CDS |
| CTTTAGCGATTCCAACCTTA+AGG | 0.348082 | 1_3:+6769323 | None:intergenic |
| AAACCTCTTTCAAAATCTTA+AGG | 0.348183 | 1_3:-6774660 | Msa0100240:five_prime_UTR |
| TCCGGGCCGTTTCTTCCGTT+TGG | 0.356551 | 1_3:-6774018 | Msa0100240:CDS |
| ACTTGTTTAAATATTCTTCA+TGG | 0.361310 | 1_3:+6767899 | None:intergenic |
| TTCTCATGTAGTCATGTCTA+AGG | 0.362965 | 1_3:-6769201 | Msa0100240:intron |
| TTAGAACAACATGCAAGCTT+GGG | 0.386136 | 1_3:-6774082 | Msa0100240:exon |
| AGCTTCCTTCAAAGGTTGTT+TGG | 0.386455 | 1_3:-6774494 | Msa0100240:five_prime_UTR |
| ATATGTGTTTGAATCCTAAA+GGG | 0.387840 | 1_3:-6773837 | Msa0100240:CDS |
| CGATGAAATCAGTTACCTTA+AGG | 0.392578 | 1_3:-6769338 | Msa0100240:CDS |
| CTGTTTCTCTACACCTATGA+TGG | 0.393409 | 1_3:-6773017 | Msa0100240:CDS |
| TGGTAATCATCCGGTGCAAC+TGG | 0.394694 | 1_3:+6767876 | None:intergenic |
| ATTTATGTATCACCTGGTTA+AGG | 0.395576 | 1_3:+6769844 | None:intergenic |
| CATATGTGTTTGAATCCTAA+AGG | 0.398211 | 1_3:-6773838 | Msa0100240:CDS |
| GTCAATTCATGCCTTTAGTT+GGG | 0.399122 | 1_3:-6770330 | Msa0100240:CDS |
| TTTAATGCTTCCAGGACATC+AGG | 0.400587 | 1_3:-6769417 | Msa0100240:intron |
| TCCTTCAAAGGTTGTTTGGT+GGG | 0.402479 | 1_3:-6774490 | Msa0100240:five_prime_UTR |
| GAGAAAGTCAAGTTTGAATC+TGG | 0.403816 | 1_3:-6773427 | Msa0100240:CDS |
| GGTCAATTCATGCCTTTAGT+TGG | 0.412243 | 1_3:-6770331 | Msa0100240:CDS |
| TCACCTGGTTAAGGTTGAAT+AGG | 0.421278 | 1_3:+6769853 | None:intergenic |
| CTTAAGGTTGGAATCGCTAA+AGG | 0.424789 | 1_3:-6769322 | Msa0100240:CDS |
| TGCCTTTAGTTGGGATTGAC+TGG | 0.425638 | 1_3:-6770321 | Msa0100240:CDS |
| AAATTACCACAATCCTTTAC+CGG | 0.427602 | 1_3:+6773199 | None:intergenic |
| TTTAGAACAACATGCAAGCT+TGG | 0.430941 | 1_3:-6774083 | Msa0100240:exon |
| TTACAAGGATAGAGAATTCA+TGG | 0.432765 | 1_3:-6768086 | Msa0100240:three_prime_UTR |
| TAGAGAATTCATGGAAGTAT+AGG | 0.434069 | 1_3:-6768077 | Msa0100240:three_prime_UTR |
| GAAAACTCAGGGTGTTAACT+TGG | 0.435480 | 1_3:-6773455 | Msa0100240:CDS |
| CAGTGCTCGTGCAATTTCTC+AGG | 0.436002 | 1_3:-6769895 | Msa0100240:CDS |
| CGCTGAATCTGCATCACCAC+TGG | 0.436104 | 1_3:+6773564 | None:intergenic |
| ATTGTTGTTCAACAGAAAGA+TGG | 0.440748 | 1_3:-6773979 | Msa0100240:CDS |
| CTTCTTCTTCTTCTCCATGT+TGG | 0.442805 | 1_3:+6773788 | None:intergenic |
| ACCTGCCGCATCCCCATCAT+AGG | 0.445358 | 1_3:+6773004 | None:intergenic |
| TATATAGTAAAATCTTCAAT+TGG | 0.448898 | 1_3:-6774628 | Msa0100240:five_prime_UTR |
| CCCTATAATTTATTAGAAAG+AGG | 0.449741 | 1_3:+6768912 | None:intergenic |
| GGGCAACTTCCAGAAATTCC+AGG | 0.456984 | 1_3:+6768933 | None:intergenic |
| TTTACCTATATATTTCTACT+AGG | 0.457876 | 1_3:+6768827 | None:intergenic |
| AAGGTTGAATAGGAATTGTC+TGG | 0.463826 | 1_3:+6769863 | None:intergenic |
| AAGGGATTGTTCTGTTAAGA+AGG | 0.468316 | 1_3:-6773113 | Msa0100240:CDS |
| GAAATTACAACAGGACCATC+TGG | 0.470676 | 1_3:+6769717 | None:intergenic |
| TGTTTCTCTACACCTATGAT+GGG | 0.472114 | 1_3:-6773016 | Msa0100240:CDS |
| GATGACAGTTGTTCAGAAGT+TGG | 0.475026 | 1_3:+6773076 | None:intergenic |
| TTCCTTCAAAGGTTGTTTGG+TGG | 0.476531 | 1_3:-6774491 | Msa0100240:five_prime_UTR |
| GCTACGTCGGTGAAAGCAAC+AGG | 0.477629 | 1_3:+6774514 | None:intergenic |
| GAAATTTCAAAGGGTTATGA+AGG | 0.482221 | 1_3:-6773920 | Msa0100240:CDS |
| ACCTATGATGGGGATGCGGC+AGG | 0.483533 | 1_3:-6773005 | Msa0100240:intron |
| GAAATCAGTTACCTTAAGGT+TGG | 0.483544 | 1_3:-6769334 | Msa0100240:CDS |
| TGTTCCTAGTAGAAATATAT+AGG | 0.487661 | 1_3:-6768831 | Msa0100240:intron |
| GCACCGCCAAACGGAAGAAA+CGG | 0.487661 | 1_3:+6774012 | None:intergenic |
| TTATAGCTATGAATGATTCT+CGG | 0.488537 | 1_3:-6773624 | Msa0100240:CDS |
| TGAGGTTGCAGCCAAGTTGT+TGG | 0.490682 | 1_3:-6773533 | Msa0100240:CDS |
| AAAATTGAGGGAGTGATTAA+GGG | 0.490787 | 1_3:-6773238 | Msa0100240:CDS |
| TTAGATTTGGGAAATTTCAA+AGG | 0.490925 | 1_3:-6773930 | Msa0100240:CDS |
| TAATTGCTCAATCATCTGTC+TGG | 0.491049 | 1_3:-6768876 | Msa0100240:three_prime_UTR |
| CTGATGTTAACTTGTGTTGG+TGG | 0.495176 | 1_3:-6768136 | Msa0100240:three_prime_UTR |
| ATATCAACCGCACCGCCAAA+CGG | 0.496170 | 1_3:+6774003 | None:intergenic |
| AACTTAGAGGTAGTAATAAG+AGG | 0.496898 | 1_3:-6773690 | Msa0100240:CDS |
| ACCCACCAAACAACCTTTGA+AGG | 0.498202 | 1_3:+6774489 | None:intergenic |
| TGTTGCAGGTCAGACGTTCT+AGG | 0.500038 | 1_3:-6770352 | Msa0100240:intron |
| GCAATTTGAATTGCATTACA+AGG | 0.500643 | 1_3:-6768101 | Msa0100240:three_prime_UTR |
| GGGCCGTTTCTTCCGTTTGG+CGG | 0.504969 | 1_3:-6774015 | Msa0100240:CDS |
| CCTGCTCAGATGAGTCTGTA+GGG | 0.506484 | 1_3:+6769092 | None:intergenic |
| CCGTCAGGGGAAATTACAAC+AGG | 0.506661 | 1_3:+6769708 | None:intergenic |
| TAGTCATGTCTAAGGTTTCA+GGG | 0.509666 | 1_3:-6769193 | Msa0100240:CDS |
| CCTATAATTTATTAGAAAGA+GGG | 0.509739 | 1_3:+6768913 | None:intergenic |
| CCCTACAGACTCATCTGAGC+AGG | 0.511436 | 1_3:-6769092 | Msa0100240:intron |
| TAGATTTGGGAAATTTCAAA+GGG | 0.515682 | 1_3:-6773929 | Msa0100240:CDS |
| GGAGCTTTAAATCATCTCCT+TGG | 0.516205 | 1_3:-6773957 | Msa0100240:CDS |
| ACCGACGTAGCTTCCTTCAA+AGG | 0.521878 | 1_3:-6774502 | Msa0100240:five_prime_UTR |
| ATAGATTTGTATTGGGGCCA+AGG | 0.525870 | 1_3:-6773588 | Msa0100240:CDS |
| GGGTGTTGATCTAGAGATAC+CGG | 0.530252 | 1_3:-6773218 | Msa0100240:CDS |
| TTAAACAAGTCCAGTTGCAC+CGG | 0.532823 | 1_3:-6767886 | Msa0100240:three_prime_UTR |
| GCCAAACGGAAGAAACGGCC+CGG | 0.533537 | 1_3:+6774017 | None:intergenic |
| ATAATATCCGTGGGAGATGG+TGG | 0.535984 | 1_3:+6774465 | None:intergenic |
| TTTCCTTCTCTATATAGAGA+AGG | 0.536561 | 1_3:-6769681 | Msa0100240:intron |
| AAACTACATGGTGAAAAGAA+AGG | 0.540317 | 1_3:+6767927 | None:intergenic |
| AATATTTATAATTAATCCCA+AGG | 0.543298 | 1_3:-6769296 | Msa0100240:intron |
| ATTCTGATGTTAACTTGTGT+TGG | 0.543951 | 1_3:-6768139 | Msa0100240:three_prime_UTR |
| TTGTTGTTCAACAGAAAGAT+GGG | 0.547423 | 1_3:-6773978 | Msa0100240:CDS |
| TCATCCTTGAATCTGAAGGA+AGG | 0.548459 | 1_3:-6773058 | Msa0100240:CDS |
| AGTTAGTGTTAGTGTTAATG+GGG | 0.553311 | 1_3:-6773875 | Msa0100240:CDS |
| AAGATGAAGGAGACAATTTG+TGG | 0.553528 | 1_3:-6773729 | Msa0100240:CDS |
| CCACCTTAAATCCAACAACT+TGG | 0.553602 | 1_3:+6773522 | None:intergenic |
| TAGGAATTGTCTGGTGTGAT+GGG | 0.553963 | 1_3:+6769872 | None:intergenic |
| AGTCAAGTTTGAATCTGGCA+AGG | 0.554206 | 1_3:-6773422 | Msa0100240:CDS |
| GTGGTGATAGCGGTGGTGAT+TGG | 0.554646 | 1_3:-6774593 | Msa0100240:five_prime_UTR |
| ATAGGAATTGTCTGGTGTGA+TGG | 0.555255 | 1_3:+6769871 | None:intergenic |
| TCTCTTCATGCTCTCGTGAA+CGG | 0.555622 | 1_3:-6769124 | Msa0100240:CDS |
| AACTGTCAACATTGGTCGAA+GGG | 0.556516 | 1_3:-6773131 | Msa0100240:CDS |
| GACCAGTCAATCCCAACTAA+AGG | 0.557857 | 1_3:+6770319 | None:intergenic |
| TCTGCATCACCACTGGACCT+TGG | 0.559022 | 1_3:+6773571 | None:intergenic |
| GGGATTGACTGGTCACAGAC+AGG | 0.560023 | 1_3:-6770310 | Msa0100240:CDS |
| CTCAATCATCTGTCTGGTGA+AGG | 0.560302 | 1_3:-6768870 | Msa0100240:three_prime_UTR |
| AATCATCTGTCTGGTGAAGG+TGG | 0.561005 | 1_3:-6768867 | Msa0100240:three_prime_UTR |
| AGAAGAATTGGAAGAACTAG+AGG | 0.565733 | 1_3:-6773770 | Msa0100240:CDS |
| GAAGGCGGCGAAAAGAGAAA+AGG | 0.569397 | 1_3:-6773902 | Msa0100240:CDS |
| CTTCATGCAAATAACCAACA+TGG | 0.571514 | 1_3:-6773802 | Msa0100240:CDS |
| CCAAGTTGTTGGATTTAAGG+TGG | 0.571926 | 1_3:-6773522 | Msa0100240:CDS |
| CATCCTTGAATCTGAAGGAA+GGG | 0.573317 | 1_3:-6773057 | Msa0100240:CDS |
| TAGAACAACATGCAAGCTTG+GGG | 0.574891 | 1_3:-6774081 | Msa0100240:exon |
| GAAATAATATCCGTGGGAGA+TGG | 0.577482 | 1_3:+6774462 | None:intergenic |
| ACTGTCATCCTTGAATCTGA+AGG | 0.578321 | 1_3:-6773062 | Msa0100240:CDS |
| TTCATGGTTAACAAACTACA+TGG | 0.579790 | 1_3:+6767915 | None:intergenic |
| CTTAAGGTAACTGATTTCAT+CGG | 0.580341 | 1_3:+6769339 | None:intergenic |
| GAATAAATAGATTTGTATTG+GGG | 0.580790 | 1_3:-6773594 | Msa0100240:CDS |
| TGATTAATAATGGAAAATGA+AGG | 0.581087 | 1_3:+6774383 | None:intergenic |
| TTCCGCAACGGTGGTGATAG+CGG | 0.583075 | 1_3:-6774603 | Msa0100240:five_prime_UTR |
| TAATAATGGAAAATGAAGGA+AGG | 0.584111 | 1_3:+6774387 | None:intergenic |
| TGATCTAGAGATACCGGTAA+AGG | 0.585910 | 1_3:-6773212 | Msa0100240:CDS |
| CTACACCTATGATGGGGATG+CGG | 0.587747 | 1_3:-6773009 | Msa0100240:CDS |
| TAGTGATATCAGATGTGGAT+GGG | 0.588202 | 1_3:-6772018 | Msa0100240:CDS |
| GAGATACCGGTAAAGGATTG+TGG | 0.589687 | 1_3:-6773205 | Msa0100240:CDS |
| CAAGTGGGAAATAATATCCG+TGG | 0.590703 | 1_3:+6774455 | None:intergenic |
| ATACCTTCTCTATATAGAGA+AGG | 0.590890 | 1_3:+6769678 | None:intergenic |
| CCTGTTGTAATTTCCCCTGA+CGG | 0.592235 | 1_3:-6769708 | Msa0100240:CDS |
| GAATTAGCAGAAGAAGATGA+AGG | 0.599106 | 1_3:-6773742 | Msa0100240:CDS |
| GTTTCTTCCGTTTGGCGGTG+CGG | 0.602861 | 1_3:-6774010 | Msa0100240:CDS |
| ACCTGCTCAGATGAGTCTGT+AGG | 0.608192 | 1_3:+6769091 | None:intergenic |
| GTTTCTCTACACCTATGATG+GGG | 0.608738 | 1_3:-6773015 | Msa0100240:CDS |
| AAATCTCGAACTGTCAACAT+TGG | 0.612310 | 1_3:-6773139 | Msa0100240:CDS |
| CACCGCTATCACCACCGTTG+CGG | 0.612889 | 1_3:+6774601 | None:intergenic |
| TACGGAAAGAAAGAAAACTC+AGG | 0.613250 | 1_3:-6773467 | Msa0100240:CDS |
| TGCTCAGATGAGTCTGTAGG+GGG | 0.614155 | 1_3:+6769094 | None:intergenic |
| GTGGGTCCCACCATCTCCCA+CGG | 0.614903 | 1_3:-6774472 | Msa0100240:five_prime_UTR |
| GAACTGTCAACATTGGTCGA+AGG | 0.615065 | 1_3:-6773132 | Msa0100240:CDS |
| ATAGTGATATCAGATGTGGA+TGG | 0.615545 | 1_3:-6772019 | Msa0100240:CDS |
| TTCCCAAATCTAACATACCA+AGG | 0.619516 | 1_3:+6773940 | None:intergenic |
| TATGTGTTTGAATCCTAAAG+GGG | 0.620432 | 1_3:-6773836 | Msa0100240:CDS |
| TCGTATAGTGATATCAGATG+TGG | 0.622752 | 1_3:-6772023 | Msa0100240:CDS |
| CTTCAATTGGAATTCCGCAA+CGG | 0.624892 | 1_3:-6774615 | Msa0100240:five_prime_UTR |
| ATGTGGATGGGACTATTACA+AGG | 0.630686 | 1_3:-6772006 | Msa0100240:intron |
| AAGTGGGAAATAATATCCGT+GGG | 0.631588 | 1_3:+6774456 | None:intergenic |
| TTAATGCTTCCAGGACATCA+GGG | 0.632684 | 1_3:-6769416 | Msa0100240:intron |
| TAATATCCGTGGGAGATGGT+GGG | 0.634660 | 1_3:+6774466 | None:intergenic |
| GTATTGGGGCCAAGGTCCAG+TGG | 0.634869 | 1_3:-6773580 | Msa0100240:CDS |
| ACGGAAAGAAAGAAAACTCA+GGG | 0.637372 | 1_3:-6773466 | Msa0100240:CDS |
| CAATTGGAATTCCGCAACGG+TGG | 0.637606 | 1_3:-6774612 | Msa0100240:five_prime_UTR |
| ATTCCTATTCAACCTTAACC+AGG | 0.638969 | 1_3:-6769856 | Msa0100240:intron |
| GATGGGAAAGTCTTACCAGA+TGG | 0.640538 | 1_3:-6769732 | Msa0100240:CDS |
| AGATTCAGCGGAGCGTGCTG+AGG | 0.642225 | 1_3:-6773551 | Msa0100240:CDS |
| CAGTGGTGATGCAGATTCAG+CGG | 0.642820 | 1_3:-6773563 | Msa0100240:CDS |
| ATTTCAAAGGGTTATGAAGG+CGG | 0.646753 | 1_3:-6773917 | Msa0100240:CDS |
| CTGCTCAGATGAGTCTGTAG+GGG | 0.650960 | 1_3:+6769093 | None:intergenic |
| TTGAGATGAGATGAACAAGT+GGG | 0.663345 | 1_3:+6774440 | None:intergenic |
| ACCTTTGAAGGAAGCTACGT+CGG | 0.667926 | 1_3:+6774501 | None:intergenic |
| CATAGGTGTAGAGAAACAGA+AGG | 0.668317 | 1_3:+6773021 | None:intergenic |
| CGCAACGGTGGTGATAGCGG+TGG | 0.674843 | 1_3:-6774600 | Msa0100240:five_prime_UTR |
| TACAACTGTGCAGCTACCTG+AGG | 0.681382 | 1_3:-6773389 | Msa0100240:intron |
| TTTGAGATGAGATGAACAAG+TGG | 0.687355 | 1_3:+6774439 | None:intergenic |
| TCAGGGTGTTAACTTGGACA+AGG | 0.709142 | 1_3:-6773449 | Msa0100240:CDS |
| TGAATTCGTGAGGAGCTCTG+CGG | 0.710130 | 1_3:+6769531 | None:intergenic |
| AGAACAACATGCAAGCTTGG+GGG | 0.711171 | 1_3:-6774080 | Msa0100240:exon |
| TTAGGAGGTTACATAAGACG+TGG | 0.734032 | 1_3:-6774054 | Msa0100240:CDS |
| GCTCAGATGAGTCTGTAGGG+GGG | 0.751001 | 1_3:+6769095 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATTCAAATTTAATTGAAT+TGG | - | chr1_3:6768185-6768204 | Msa0100240:intron | 10.0% |
| !! | TAATTTATGAAAAAACATTA+TGG | - | chr1_3:6774044-6774063 | Msa0100240:CDS | 10.0% |
| !!! | AATTGAAGATTTTACTATAT+AGG | + | chr1_3:6767887-6767906 | None:intergenic | 15.0% |
| !! | TATATAGTAAAATCTTCAAT+TGG | - | chr1_3:6767886-6767905 | Msa0100240:three_prime_UTR | 15.0% |
| !! | TACTGATAAATGATTAATAA+TGG | + | chr1_3:6768144-6768163 | None:intergenic | 15.0% |
| !! | AGAATAAATAGATTTGTATT+GGG | - | chr1_3:6768919-6768938 | Msa0100240:exon | 15.0% |
| !! | ATATGTTATAGTTATTGTTT+AGG | - | chr1_3:6769248-6769267 | Msa0100240:intron | 15.0% |
| !! | TATGTTATAGTTATTGTTTA+GGG | - | chr1_3:6769249-6769268 | Msa0100240:intron | 15.0% |
| !!! | ATATAGATTTTCATCATTTT+TGG | + | chr1_3:6769801-6769820 | None:intergenic | 15.0% |
| !!! | TGCAAAATAGATTTTATATT+CGG | - | chr1_3:6770563-6770582 | Msa0100240:intron | 15.0% |
| !! | TTATAAAGATAAACTTTATG+AGG | - | chr1_3:6771589-6771608 | Msa0100240:intron | 15.0% |
| !! | TAATTATTAATTGATGTTCT+AGG | - | chr1_3:6772455-6772474 | Msa0100240:intron | 15.0% |
| !! | TATATATAATCAGTATGTTT+AGG | + | chr1_3:6772941-6772960 | None:intergenic | 15.0% |
| !! | AATATTTATAATTAATCCCA+AGG | - | chr1_3:6773218-6773237 | Msa0100240:CDS | 15.0% |
| !! | AAGAAATATTTAGATACTAA+TGG | - | chr1_3:6774007-6774026 | Msa0100240:CDS | 15.0% |
| !! | ATACATTAACATTATACTAA+TGG | + | chr1_3:6774249-6774268 | None:intergenic | 15.0% |
| !!! | TGATTAATAATGGAAAATGA+AGG | + | chr1_3:6768134-6768153 | None:intergenic | 20.0% |
| !!! | TTTATGTTGTTTTCGAAATT+TGG | - | chr1_3:6768333-6768352 | Msa0100240:intron | 20.0% |
| !! | GAGAATAAATAGATTTGTAT+TGG | - | chr1_3:6768918-6768937 | Msa0100240:exon | 20.0% |
| !! | GAATAAATAGATTTGTATTG+GGG | - | chr1_3:6768920-6768939 | Msa0100240:exon | 20.0% |
| !!! | ATGATGTTTGATTTTATTCT+TGG | - | chr1_3:6769151-6769170 | Msa0100240:CDS | 20.0% |
| !!! | TCTTCATTTTTATTGTTGTT+TGG | - | chr1_3:6769549-6769568 | Msa0100240:intron | 20.0% |
| !! | AACAAATTGAATTCAAAACT+CGG | + | chr1_3:6769921-6769940 | None:intergenic | 20.0% |
| !! | ATAAAAGATAGAAAATTCCA+AGG | + | chr1_3:6770310-6770329 | None:intergenic | 20.0% |
| !! | AAGATTGTATATTTGCATTA+TGG | - | chr1_3:6770351-6770370 | Msa0100240:intron | 20.0% |
| !!! | TTTTATATTAGATTGATGCT+CGG | - | chr1_3:6770445-6770464 | Msa0100240:intron | 20.0% |
| !! | TCTTTGATTAAAAATGAATC+AGG | + | chr1_3:6771067-6771086 | None:intergenic | 20.0% |
| !! | AGTTTATTAAACAAAGAAGT+CGG | + | chr1_3:6771530-6771549 | None:intergenic | 20.0% |
| !!! | AATTTATGAAGTACTATTGT+GGG | - | chr1_3:6771890-6771909 | Msa0100240:intron | 20.0% |
| !! | ATATATCTGGATGTTAAAAA+TGG | + | chr1_3:6772075-6772094 | None:intergenic | 20.0% |
| !!! | TCATTTATTTTCAGAAATCA+AGG | - | chr1_3:6772233-6772252 | Msa0100240:intron | 20.0% |
| !! | AAAAAACATTACTATAGAAG+GGG | + | chr1_3:6772900-6772919 | None:intergenic | 20.0% |
| !! | GAAAAAACATTACTATAGAA+GGG | + | chr1_3:6772901-6772920 | None:intergenic | 20.0% |
| !! | TGAAAAAACATTACTATAGA+AGG | + | chr1_3:6772902-6772921 | None:intergenic | 20.0% |
| !! | CCTATAATTTATTAGAAAGA+GGG | + | chr1_3:6773604-6773623 | None:intergenic | 20.0% |
| !! | CCTCTTTCTAATAAATTATA+GGG | - | chr1_3:6773602-6773621 | Msa0100240:CDS | 20.0% |
| !!! | TTTACCTATATATTTCTACT+AGG | + | chr1_3:6773690-6773709 | None:intergenic | 20.0% |
| !!! | AAATGCCTGATAATTTTTAA+TGG | - | chr1_3:6773759-6773778 | Msa0100240:CDS | 20.0% |
| !!! | AATGCCTGATAATTTTTAAT+GGG | - | chr1_3:6773760-6773779 | Msa0100240:CDS | 20.0% |
| !! | AAAACCCATTAAAAATTATC+AGG | + | chr1_3:6773767-6773786 | None:intergenic | 20.0% |
| !! | TCTATATTCTGATTAATCAA+AGG | + | chr1_3:6773794-6773813 | None:intergenic | 20.0% |
| !! | TACTTGAAAATAATCTTTGA+TGG | + | chr1_3:6774194-6774213 | None:intergenic | 20.0% |
| !!! | CAAAGATTATTTTCAAGTAT+TGG | - | chr1_3:6774195-6774214 | Msa0100240:intron | 20.0% |
| !! | ATGTTAATGTATTTGTTTGT+TGG | - | chr1_3:6774257-6774276 | Msa0100240:intron | 20.0% |
| !! | AGGAAAAAAACTAAAACTAA+AGG | + | chr1_3:6774570-6774589 | None:intergenic | 20.0% |
| !! | ACTTGTTTAAATATTCTTCA+TGG | + | chr1_3:6774618-6774637 | None:intergenic | 20.0% |
| ! | AAACCTCTTTCAAAATCTTA+AGG | - | chr1_3:6767854-6767873 | Msa0100240:three_prime_UTR | 25.0% |
| !! | TAATAATGGAAAATGAAGGA+AGG | + | chr1_3:6768130-6768149 | None:intergenic | 25.0% |
| !!! | TGGTTCTGTTTTGTTTTTTT+AGG | - | chr1_3:6768353-6768372 | Msa0100240:intron | 25.0% |
| ! | TTAGATTTGGGAAATTTCAA+AGG | - | chr1_3:6768584-6768603 | Msa0100240:intron | 25.0% |
| ! | TAGATTTGGGAAATTTCAAA+GGG | - | chr1_3:6768585-6768604 | Msa0100240:intron | 25.0% |
| ! | AAAGTTAGTGTTAGTGTTAA+TGG | - | chr1_3:6768637-6768656 | Msa0100240:intron | 25.0% |
| ! | AAGTTAGTGTTAGTGTTAAT+GGG | - | chr1_3:6768638-6768657 | Msa0100240:intron | 25.0% |
| ! | ATATGTGTTTGAATCCTAAA+GGG | - | chr1_3:6768677-6768696 | Msa0100240:intron | 25.0% |
| !!! | AAGTGCAAATTTTAGTTTAG+AGG | - | chr1_3:6768861-6768880 | Msa0100240:three_prime_UTR | 25.0% |
| ! | TTATAGCTATGAATGATTCT+CGG | - | chr1_3:6768890-6768909 | Msa0100240:three_prime_UTR | 25.0% |
| ! | AGTATTTGCTTAATGAGAAT+AGG | - | chr1_3:6769183-6769202 | Msa0100240:CDS | 25.0% |
| ! | AATGAATATGTGAAGAAGAA+TGG | - | chr1_3:6769601-6769620 | Msa0100240:intron | 25.0% |
| ! | AATCTCTGCAATCATTAAAT+TGG | - | chr1_3:6769863-6769882 | Msa0100240:CDS | 25.0% |
| !!! | ACTGTCACTTCTATTATTTT+TGG | - | chr1_3:6770089-6770108 | Msa0100240:intron | 25.0% |
| ! | TCTTGATCATATCAAAGTAT+GGG | + | chr1_3:6770335-6770354 | None:intergenic | 25.0% |
| ! | ATCTTGATCATATCAAAGTA+TGG | + | chr1_3:6770336-6770355 | None:intergenic | 25.0% |
| ! | ATTGTATATTTGCATTATGG+AGG | - | chr1_3:6770354-6770373 | Msa0100240:intron | 25.0% |
| ! | TTGTATATTTGCATTATGGA+GGG | - | chr1_3:6770355-6770374 | Msa0100240:intron | 25.0% |
| ! | GAAAATGAAAGAGAAGTTAT+AGG | + | chr1_3:6770385-6770404 | None:intergenic | 25.0% |
| ! | GAGGATATATCTTATTGAAA+AGG | - | chr1_3:6770532-6770551 | Msa0100240:intron | 25.0% |
| !! | ATAGATTTTATATTCGGACA+AGG | - | chr1_3:6770569-6770588 | Msa0100240:intron | 25.0% |
| !!! | TTTATTCATGCTTTGAAAGT+TGG | - | chr1_3:6770903-6770922 | Msa0100240:intron | 25.0% |
| ! | ACATAATTACAGACGAATAA+AGG | + | chr1_3:6771655-6771674 | None:intergenic | 25.0% |
| ! | GAGGTGATTAATGTAAAATT+TGG | - | chr1_3:6771807-6771826 | Msa0100240:intron | 25.0% |
| !! | CAATTTATGAAGTACTATTG+TGG | - | chr1_3:6771889-6771908 | Msa0100240:intron | 25.0% |
| ! | TCATGTTATTAGAAATGTCT+TGG | - | chr1_3:6771917-6771936 | Msa0100240:intron | 25.0% |
| !!! | ATCAGTTGTTTTATCTGTTA+AGG | - | chr1_3:6772391-6772410 | Msa0100240:intron | 25.0% |
| ! | AATAAAAACCAGAAGATTGT+TGG | + | chr1_3:6772518-6772537 | None:intergenic | 25.0% |
| ! | ATTTATCTTGTGCGTATTTA+TGG | - | chr1_3:6772539-6772558 | Msa0100240:intron | 25.0% |
| ! | TTTCAAATTTATGTATCACC+TGG | + | chr1_3:6772679-6772698 | None:intergenic | 25.0% |
| ! | ATTCAAAATTGCATGTTTAG+AGG | - | chr1_3:6773001-6773020 | Msa0100240:intron | 25.0% |
| ! | CCCTCTTTCTAATAAATTAT+AGG | - | chr1_3:6773601-6773620 | Msa0100240:CDS | 25.0% |
| ! | CCCTATAATTTATTAGAAAG+AGG | + | chr1_3:6773605-6773624 | None:intergenic | 25.0% |
| ! | TGTTCCTAGTAGAAATATAT+AGG | - | chr1_3:6773683-6773702 | Msa0100240:CDS | 25.0% |
| ! | TTTCCTACAAAAATCCTAAA+GGG | + | chr1_3:6773838-6773857 | None:intergenic | 25.0% |
| ! | ATTATACTAATGGTAATACG+AGG | + | chr1_3:6774239-6774258 | None:intergenic | 25.0% |
| ! | TTGATAAACATTGTTCATAC+AGG | - | chr1_3:6774319-6774338 | Msa0100240:intron | 25.0% |
| !! | ATCTCATCAATAGATTTTTG+TGG | + | chr1_3:6774661-6774680 | None:intergenic | 25.0% |
| !! | TCTCCTTAAGATTTTGAAAG+AGG | + | chr1_3:6767860-6767879 | None:intergenic | 30.0% |
| ! | ATTGTTGTTCAACAGAAAGA+TGG | - | chr1_3:6768535-6768554 | Msa0100240:intron | 30.0% |
| ! | TTGTTGTTCAACAGAAAGAT+GGG | - | chr1_3:6768536-6768555 | Msa0100240:intron | 30.0% |
| GAAATTTCAAAGGGTTATGA+AGG | - | chr1_3:6768594-6768613 | Msa0100240:intron | 30.0% | |
| AGTTAGTGTTAGTGTTAATG+GGG | - | chr1_3:6768639-6768658 | Msa0100240:intron | 30.0% | |
| CATATGTGTTTGAATCCTAA+AGG | - | chr1_3:6768676-6768695 | Msa0100240:intron | 30.0% | |
| TATGTGTTTGAATCCTAAAG+GGG | - | chr1_3:6768678-6768697 | Msa0100240:intron | 30.0% | |
| AGAAAAAAAACTTCCCCTTT+AGG | + | chr1_3:6768694-6768713 | None:intergenic | 30.0% | |
| TGTGATGATATTCAACTTAG+AGG | - | chr1_3:6768811-6768830 | Msa0100240:intron | 30.0% | |
| AACTTAGAGGTAGTAATAAG+AGG | - | chr1_3:6768824-6768843 | Msa0100240:intron | 30.0% | |
| ! | TTTTGATGAACTTTCCCATA+CGG | - | chr1_3:6769029-6769048 | Msa0100240:intron | 30.0% |
| ! | AGTTTTCTTTCTTTCCGTAT+GGG | + | chr1_3:6769046-6769065 | None:intergenic | 30.0% |
| AATCAAACATCATTTACCTC+AGG | + | chr1_3:6769144-6769163 | None:intergenic | 30.0% | |
| GTTATAGTTATTGTTTAGGG+TGG | - | chr1_3:6769252-6769271 | Msa0100240:intron | 30.0% | |
| AAAAATTGAGGGAGTGATTA+AGG | - | chr1_3:6769275-6769294 | Msa0100240:intron | 30.0% | |
| AAAATTGAGGGAGTGATTAA+GGG | - | chr1_3:6769276-6769295 | Msa0100240:intron | 30.0% | |
| AAATTACCACAATCCTTTAC+CGG | + | chr1_3:6769318-6769337 | None:intergenic | 30.0% | |
| !! | TTGTGGTAATTTTGATGTTG+CGG | - | chr1_3:6769326-6769345 | Msa0100240:CDS | 30.0% |
| AAATCTCCACTGTATAAAGT+AGG | - | chr1_3:6769701-6769720 | Msa0100240:CDS | 30.0% | |
| TGTAATCCTACTTTATACAG+TGG | + | chr1_3:6769710-6769729 | None:intergenic | 30.0% | |
| TTACAACGACACTCTTAATA+TGG | - | chr1_3:6769725-6769744 | Msa0100240:CDS | 30.0% | |
| TACAACGACACTCTTAATAT+GGG | - | chr1_3:6769726-6769745 | Msa0100240:CDS | 30.0% | |
| TTTCATGACAACACTGAATT+TGG | + | chr1_3:6769837-6769856 | None:intergenic | 30.0% | |
| AATCATTAAATTGGAGCTGT+TGG | - | chr1_3:6769872-6769891 | Msa0100240:CDS | 30.0% | |
| CAGAAAAGTAAGATCAATGT+CGG | + | chr1_3:6769964-6769983 | None:intergenic | 30.0% | |
| AAGATTAACGAAGTGAATCT+TGG | + | chr1_3:6770038-6770057 | None:intergenic | 30.0% | |
| !! | CAATACATGATGGACTTATA+AGG | + | chr1_3:6770142-6770161 | None:intergenic | 30.0% |
| TATAAGTCCATCATGTATTG+TGG | - | chr1_3:6770142-6770161 | Msa0100240:intron | 30.0% | |
| ATTACACTTTCAAAGCTTCT+AGG | + | chr1_3:6770232-6770251 | None:intergenic | 30.0% | |
| GCGATAATCTTCAAAAATCT+AGG | - | chr1_3:6770271-6770290 | Msa0100240:intron | 30.0% | |
| TTTCTCTTACAAGCACAATA+GGG | - | chr1_3:6770757-6770776 | Msa0100240:intron | 30.0% | |
| ! | CATTTTTCTCACATATGACA+CGG | - | chr1_3:6771108-6771127 | Msa0100240:intron | 30.0% |
| ! | CTGTCATGATTTTCTGTAAT+TGG | - | chr1_3:6771307-6771326 | Msa0100240:intron | 30.0% |
| ! | CATGATTTTCTGTAATTGGA+TGG | - | chr1_3:6771311-6771330 | Msa0100240:intron | 30.0% |
| GGAACTATGTAAGGTAAATA+CGG | - | chr1_3:6771344-6771363 | Msa0100240:intron | 30.0% | |
| AAGCATAAGTGTATTAAGCT+TGG | - | chr1_3:6771370-6771389 | Msa0100240:intron | 30.0% | |
| ! | TTGCTTTGTATTTTCACCAT+AGG | - | chr1_3:6771421-6771440 | Msa0100240:intron | 30.0% |
| AAGTTTGATACTCTATCCTA+TGG | + | chr1_3:6771440-6771459 | None:intergenic | 30.0% | |
| ! | ATAGAGTATCAAACTTAGTC+TGG | - | chr1_3:6771444-6771463 | Msa0100240:intron | 30.0% |
| GAATCTAATTGACATCAGTA+TGG | + | chr1_3:6771615-6771634 | None:intergenic | 30.0% | |
| GTCAATTAGATTCTTGTAGA+TGG | - | chr1_3:6771622-6771641 | Msa0100240:intron | 30.0% | |
| AGTTTAGCAAAGAAATCAAC+AGG | + | chr1_3:6771681-6771700 | None:intergenic | 30.0% | |
| ! | TAGCATTCACTGATAATGAT+TGG | - | chr1_3:6771733-6771752 | Msa0100240:intron | 30.0% |
| ! | ATCCTTTTATTGTTCCATTC+TGG | - | chr1_3:6771785-6771804 | Msa0100240:intron | 30.0% |
| GTCAATCAATTCGATCTTAA+AGG | + | chr1_3:6771870-6771889 | None:intergenic | 30.0% | |
| !!! | TGGTCACTTTTAAGATGATA+AGG | - | chr1_3:6771937-6771956 | Msa0100240:intron | 30.0% |
| AATTCTACAAGTGTACTATC+CGG | + | chr1_3:6772025-6772044 | None:intergenic | 30.0% | |
| ATTTATGTATCACCTGGTTA+AGG | + | chr1_3:6772673-6772692 | None:intergenic | 30.0% | |
| CAAAACAAGAAGACAAAAGA+AGG | - | chr1_3:6772722-6772741 | Msa0100240:intron | 30.0% | |
| TGCATCATAACAAAACAAAC+AGG | + | chr1_3:6772761-6772780 | None:intergenic | 30.0% | |
| !!! | TGTTTGTTTTGTTATGATGC+AGG | - | chr1_3:6772760-6772779 | Msa0100240:intron | 30.0% |
| TTTCCTTCTCTATATAGAGA+AGG | - | chr1_3:6772833-6772852 | Msa0100240:intron | 30.0% | |
| ATACCTTCTCTATATAGAGA+AGG | + | chr1_3:6772839-6772858 | None:intergenic | 30.0% | |
| AAATTGCATGTTTAGAGGTT+TGG | - | chr1_3:6773006-6773025 | Msa0100240:CDS | 30.0% | |
| AAGTTGAATTTAATGCTTCC+AGG | - | chr1_3:6773089-6773108 | Msa0100240:CDS | 30.0% | |
| TAAAAAGGATTTGAATCAGG+AGG | + | chr1_3:6773132-6773151 | None:intergenic | 30.0% | |
| GCATAAAAAGGATTTGAATC+AGG | + | chr1_3:6773135-6773154 | None:intergenic | 30.0% | |
| ! | GATTCAAATCCTTTTTATGC+TGG | - | chr1_3:6773135-6773154 | Msa0100240:CDS | 30.0% |
| !!! | AATCCTTTTTATGCTGGTTT+TGG | - | chr1_3:6773141-6773160 | Msa0100240:CDS | 30.0% |
| TTTCCAAAACCAGCATAAAA+AGG | + | chr1_3:6773147-6773166 | None:intergenic | 30.0% | |
| ! | CTTAAGGTAACTGATTTCAT+CGG | + | chr1_3:6773178-6773197 | None:intergenic | 30.0% |
| ATTTCAATTCCTGGAATTTC+TGG | - | chr1_3:6773572-6773591 | Msa0100240:CDS | 30.0% | |
| ATTTAATAACTCCTATGCTG+GGG | + | chr1_3:6773743-6773762 | None:intergenic | 30.0% | |
| CATTTAATAACTCCTATGCT+GGG | + | chr1_3:6773744-6773763 | None:intergenic | 30.0% | |
| CTTTCCTACAAAAATCCTAA+AGG | + | chr1_3:6773839-6773858 | None:intergenic | 30.0% | |
| AGGCTAATATGACAAACTAT+AGG | - | chr1_3:6773977-6773996 | Msa0100240:CDS | 30.0% | |
| ATATTTAGATACTAATGGCG+TGG | - | chr1_3:6774012-6774031 | Msa0100240:CDS | 30.0% | |
| ! | TTGTTGTTGATATGTCTGTT+TGG | - | chr1_3:6774116-6774135 | Msa0100240:five_prime_UTR | 30.0% |
| !! | ATTCTGATGTTAACTTGTGT+TGG | - | chr1_3:6774375-6774394 | Msa0100240:intron | 30.0% |
| !! | GTGTTGGTGGATTTATTTAT+TGG | - | chr1_3:6774391-6774410 | Msa0100240:five_prime_UTR | 30.0% |
| GCAATTTGAATTGCATTACA+AGG | - | chr1_3:6774413-6774432 | Msa0100240:five_prime_UTR | 30.0% | |
| TTACAAGGATAGAGAATTCA+TGG | - | chr1_3:6774428-6774447 | Msa0100240:five_prime_UTR | 30.0% | |
| ! | TAGAGAATTCATGGAAGTAT+AGG | - | chr1_3:6774437-6774456 | Msa0100240:five_prime_UTR | 30.0% |
| AAACTACATGGTGAAAAGAA+AGG | + | chr1_3:6774590-6774609 | None:intergenic | 30.0% | |
| TTCATGGTTAACAAACTACA+TGG | + | chr1_3:6774602-6774621 | None:intergenic | 30.0% | |
| ! | AGATTTTTGTGGTAATCATC+CGG | + | chr1_3:6774650-6774669 | None:intergenic | 30.0% |
| AAGTGGGAAATAATATCCGT+GGG | + | chr1_3:6768061-6768080 | None:intergenic | 35.0% | |
| TTGAGATGAGATGAACAAGT+GGG | + | chr1_3:6768077-6768096 | None:intergenic | 35.0% | |
| ! | TTTGAGATGAGATGAACAAG+TGG | + | chr1_3:6768078-6768097 | None:intergenic | 35.0% |
| ACAGAATATGCTTTCATCGT+TGG | - | chr1_3:6768275-6768294 | Msa0100240:intron | 35.0% | |
| AGAGATCTGAAGACATGAAA+AGG | + | chr1_3:6768303-6768322 | None:intergenic | 35.0% | |
| ! | TTTAGAACAACATGCAAGCT+TGG | - | chr1_3:6768431-6768450 | Msa0100240:intron | 35.0% |
| TTAGAACAACATGCAAGCTT+GGG | - | chr1_3:6768432-6768451 | Msa0100240:intron | 35.0% | |
| TCTCCTTGGTATGTTAGATT+TGG | - | chr1_3:6768571-6768590 | Msa0100240:intron | 35.0% | |
| CTCCTTGGTATGTTAGATTT+GGG | - | chr1_3:6768572-6768591 | Msa0100240:intron | 35.0% | |
| TTCCCAAATCTAACATACCA+AGG | + | chr1_3:6768577-6768596 | None:intergenic | 35.0% | |
| ATTTCAAAGGGTTATGAAGG+CGG | - | chr1_3:6768597-6768616 | Msa0100240:intron | 35.0% | |
| CTTCATGCAAATAACCAACA+TGG | - | chr1_3:6768712-6768731 | Msa0100240:intron | 35.0% | |
| TGGAGAAGAAGAAGAAGAAT+TGG | - | chr1_3:6768732-6768751 | Msa0100240:intron | 35.0% | |
| AGAAGAATTGGAAGAACTAG+AGG | - | chr1_3:6768744-6768763 | Msa0100240:intron | 35.0% | |
| GAATTAGCAGAAGAAGATGA+AGG | - | chr1_3:6768772-6768791 | Msa0100240:intron | 35.0% | |
| AAGATGAAGGAGACAATTTG+TGG | - | chr1_3:6768785-6768804 | Msa0100240:intron | 35.0% | |
| ! | GAGTTTTCTTTCTTTCCGTA+TGG | + | chr1_3:6769047-6769066 | None:intergenic | 35.0% |
| TACGGAAAGAAAGAAAACTC+AGG | - | chr1_3:6769047-6769066 | Msa0100240:intron | 35.0% | |
| ACGGAAAGAAAGAAAACTCA+GGG | - | chr1_3:6769048-6769067 | Msa0100240:intron | 35.0% | |
| GAGAAAGTCAAGTTTGAATC+TGG | - | chr1_3:6769087-6769106 | Msa0100240:intron | 35.0% | |
| !! | CTGAAAAGTGTGTTCTGTTT+TGG | - | chr1_3:6769213-6769232 | Msa0100240:intron | 35.0% |
| ! | TGTTTAGGGTGGAAAAATTG+AGG | - | chr1_3:6769263-6769282 | Msa0100240:intron | 35.0% |
| ! | GTTTAGGGTGGAAAAATTGA+GGG | - | chr1_3:6769264-6769283 | Msa0100240:intron | 35.0% |
| !! | AATTTTGATGTTGCGGATGT+TGG | - | chr1_3:6769333-6769352 | Msa0100240:CDS | 35.0% |
| ! | TGTTGACAGTTCGAGATTTT+TGG | + | chr1_3:6769374-6769393 | None:intergenic | 35.0% |
| AAATCTCGAACTGTCAACAT+TGG | - | chr1_3:6769375-6769394 | Msa0100240:CDS | 35.0% | |
| AAGGGATTGTTCTGTTAAGA+AGG | - | chr1_3:6769401-6769420 | Msa0100240:CDS | 35.0% | |
| TGTTTCTCTACACCTATGAT+GGG | - | chr1_3:6769498-6769517 | Msa0100240:intron | 35.0% | |
| !! | TTTGGCAAAAGTACTTCTCT+TGG | - | chr1_3:6769567-6769586 | Msa0100240:intron | 35.0% |
| !! | TTGGCAAAAGTACTTCTCTT+GGG | - | chr1_3:6769568-6769587 | Msa0100240:intron | 35.0% |
| CACTCTTAATATGGGAGAAT+TGG | - | chr1_3:6769734-6769753 | Msa0100240:CDS | 35.0% | |
| AGCCTAGTTAGATAAAAACG+AGG | + | chr1_3:6769760-6769779 | None:intergenic | 35.0% | |
| !! | TCGTTTTTATCTAACTAGGC+TGG | - | chr1_3:6769759-6769778 | Msa0100240:intron | 35.0% |
| ACAACACTGAATTTGGATTC+AGG | + | chr1_3:6769830-6769849 | None:intergenic | 35.0% | |
| !! | CGACATTGATCTTACTTTTC+TGG | - | chr1_3:6769962-6769981 | Msa0100240:intron | 35.0% |
| GATAGAAAATTCCAAGGTCT+AGG | + | chr1_3:6770304-6770323 | None:intergenic | 35.0% | |
| !! | TTGATGCTCGGATATTTTTG+TGG | - | chr1_3:6770457-6770476 | Msa0100240:intron | 35.0% |
| !! | CTCGGATATTTTTGTGGAAA+TGG | - | chr1_3:6770463-6770482 | Msa0100240:intron | 35.0% |
| TCGTATAGTGATATCAGATG+TGG | - | chr1_3:6770491-6770510 | Msa0100240:intron | 35.0% | |
| ATAGTGATATCAGATGTGGA+TGG | - | chr1_3:6770495-6770514 | Msa0100240:intron | 35.0% | |
| TAGTGATATCAGATGTGGAT+GGG | - | chr1_3:6770496-6770515 | Msa0100240:intron | 35.0% | |
| !! | ATCTTTGAGATCATGAGAAC+AGG | - | chr1_3:6770683-6770702 | Msa0100240:intron | 35.0% |
| !! | TCTTTGAGATCATGAGAACA+GGG | - | chr1_3:6770684-6770703 | Msa0100240:intron | 35.0% |
| ATCATGAGAACAGGGTAAAT+AGG | - | chr1_3:6770692-6770711 | Msa0100240:intron | 35.0% | |
| TCATGAGAACAGGGTAAATA+GGG | - | chr1_3:6770693-6770712 | Msa0100240:intron | 35.0% | |
| GTTTCTCTTACAAGCACAAT+AGG | - | chr1_3:6770756-6770775 | Msa0100240:intron | 35.0% | |
| AATAGACATGACACACTCTA+AGG | + | chr1_3:6770995-6771014 | None:intergenic | 35.0% | |
| TGTCTATTTCAAACCCAACA+AGG | - | chr1_3:6771007-6771026 | Msa0100240:intron | 35.0% | |
| CACTTGAAGAAAACTAGACA+TGG | - | chr1_3:6771154-6771173 | Msa0100240:intron | 35.0% | |
| ATAGTGCTAATGAGATACTG+AGG | - | chr1_3:6771200-6771219 | Msa0100240:intron | 35.0% | |
| TAATTGGATGGTCCTAATTG+AGG | - | chr1_3:6771323-6771342 | Msa0100240:intron | 35.0% | |
| CCTTACATAGTTCCTCAATT+AGG | + | chr1_3:6771338-6771357 | None:intergenic | 35.0% | |
| CCTAATTGAGGAACTATGTA+AGG | - | chr1_3:6771335-6771354 | Msa0100240:intron | 35.0% | |
| ! | GCTTGGAGTATATATGCTTT+TGG | - | chr1_3:6771387-6771406 | Msa0100240:intron | 35.0% |
| TCATTATCAGTGAATGCTAC+TGG | + | chr1_3:6771732-6771751 | None:intergenic | 35.0% | |
| CTCCAGAATGGAACAATAAA+AGG | + | chr1_3:6771790-6771809 | None:intergenic | 35.0% | |
| ! | CTTTTATTGTTCCATTCTGG+AGG | - | chr1_3:6771788-6771807 | Msa0100240:intron | 35.0% |
| TACATTAATCACCTCCAGAA+TGG | + | chr1_3:6771802-6771821 | None:intergenic | 35.0% | |
| GAGTTTGACATATGTAAGAC+TGG | - | chr1_3:6771962-6771981 | Msa0100240:intron | 35.0% | |
| ATCATGCAGATTGAATTCTG+GGG | + | chr1_3:6771990-6772009 | None:intergenic | 35.0% | |
| CATCATGCAGATTGAATTCT+GGG | + | chr1_3:6771991-6772010 | None:intergenic | 35.0% | |
| TCATCATGCAGATTGAATTC+TGG | + | chr1_3:6771992-6772011 | None:intergenic | 35.0% | |
| TGGATGTTAAAAATGGTTGC+AGG | + | chr1_3:6772068-6772087 | None:intergenic | 35.0% | |
| AGAATTAAGCTCCAGAACAA+AGG | + | chr1_3:6772099-6772118 | None:intergenic | 35.0% | |
| !!! | TCTCTTGTTTTATGTGTTGC+AGG | - | chr1_3:6772148-6772167 | Msa0100240:intron | 35.0% |
| GTCAATTCATGCCTTTAGTT+GGG | - | chr1_3:6772184-6772203 | Msa0100240:intron | 35.0% | |
| AAGGTTGAATAGGAATTGTC+TGG | + | chr1_3:6772654-6772673 | None:intergenic | 35.0% | |
| ATTCCTATTCAACCTTAACC+AGG | - | chr1_3:6772658-6772677 | Msa0100240:intron | 35.0% | |
| !! | TGTTTTGTTATGATGCAGGA+TGG | - | chr1_3:6772764-6772783 | Msa0100240:intron | 35.0% |
| !! | GTTTTGTTATGATGCAGGAT+GGG | - | chr1_3:6772765-6772784 | Msa0100240:intron | 35.0% |
| ! | CATGCAATTTTGAATTCGTG+AGG | + | chr1_3:6772996-6773015 | None:intergenic | 35.0% |
| ! | ATTTGAGTATCGTCATTGCT+AGG | - | chr1_3:6773061-6773080 | Msa0100240:CDS | 35.0% |
| CGATGAAATCAGTTACCTTA+AGG | - | chr1_3:6773176-6773195 | Msa0100240:CDS | 35.0% | |
| GAAATCAGTTACCTTAAGGT+TGG | - | chr1_3:6773180-6773199 | Msa0100240:CDS | 35.0% | |
| TATGAGAGACTCATTACCTT+GGG | + | chr1_3:6773237-6773256 | None:intergenic | 35.0% | |
| ATATGAGAGACTCATTACCT+TGG | + | chr1_3:6773238-6773257 | None:intergenic | 35.0% | |
| TAGACATGACTACATGAGAA+CGG | + | chr1_3:6773313-6773332 | None:intergenic | 35.0% | |
| TTCTCATGTAGTCATGTCTA+AGG | - | chr1_3:6773313-6773332 | Msa0100240:intron | 35.0% | |
| ! | TAGTCATGTCTAAGGTTTCA+GGG | - | chr1_3:6773321-6773340 | Msa0100240:intron | 35.0% |
| ! | ATTTTGTGTCTAAGCAACGT+CGG | + | chr1_3:6773362-6773381 | None:intergenic | 35.0% |
| GTCATATATATGGAGAGAGA+TGG | + | chr1_3:6773493-6773512 | None:intergenic | 35.0% | |
| TCCATATATATGACGTCACA+AGG | - | chr1_3:6773499-6773518 | Msa0100240:CDS | 35.0% | |
| TCCTTGTGACGTCATATATA+TGG | + | chr1_3:6773503-6773522 | None:intergenic | 35.0% | |
| TAATTGCTCAATCATCTGTC+TGG | - | chr1_3:6773638-6773657 | Msa0100240:CDS | 35.0% | |
| GCATTTAATAACTCCTATGC+TGG | + | chr1_3:6773745-6773764 | None:intergenic | 35.0% | |
| CAGAATATAGAAGCTCTGTT+AGG | - | chr1_3:6773803-6773822 | Msa0100240:CDS | 35.0% | |
| ! | TTAGGACTTTTCTTCCCTTT+AGG | - | chr1_3:6773821-6773840 | Msa0100240:CDS | 35.0% |
| !!! | CTTCCCTTTAGGATTTTTGT+AGG | - | chr1_3:6773832-6773851 | Msa0100240:CDS | 35.0% |
| !! | AAGTATTGGTCTCAATGTCT+TGG | - | chr1_3:6774209-6774228 | Msa0100240:intron | 35.0% |
| ! | AGAATGTTGCTCTTTTCATG+GGG | + | chr1_3:6774360-6774379 | None:intergenic | 35.0% |
| ! | CAGAATGTTGCTCTTTTCAT+GGG | + | chr1_3:6774361-6774380 | None:intergenic | 35.0% |
| ! | TCAGAATGTTGCTCTTTTCA+TGG | + | chr1_3:6774362-6774381 | None:intergenic | 35.0% |
| CTTCAATTGGAATTCCGCAA+CGG | - | chr1_3:6767899-6767918 | Msa0100240:three_prime_UTR | 40.0% | |
| AGCTTCCTTCAAAGGTTGTT+TGG | - | chr1_3:6768020-6768039 | Msa0100240:intron | 40.0% | |
| TTCCTTCAAAGGTTGTTTGG+TGG | - | chr1_3:6768023-6768042 | Msa0100240:intron | 40.0% | |
| TCCTTCAAAGGTTGTTTGGT+GGG | - | chr1_3:6768024-6768043 | Msa0100240:intron | 40.0% | |
| GAAATAATATCCGTGGGAGA+TGG | + | chr1_3:6768055-6768074 | None:intergenic | 40.0% | |
| CAAGTGGGAAATAATATCCG+TGG | + | chr1_3:6768062-6768081 | None:intergenic | 40.0% | |
| TAGAACAACATGCAAGCTTG+GGG | - | chr1_3:6768433-6768452 | Msa0100240:intron | 40.0% | |
| TTAGGAGGTTACATAAGACG+TGG | - | chr1_3:6768460-6768479 | Msa0100240:intron | 40.0% | |
| !! | GGAGCTTTAAATCATCTCCT+TGG | - | chr1_3:6768557-6768576 | Msa0100240:intron | 40.0% |
| CTTCTTCTTCTTCTCCATGT+TGG | + | chr1_3:6768729-6768748 | None:intergenic | 40.0% | |
| ATAGATTTGTATTGGGGCCA+AGG | - | chr1_3:6768926-6768945 | Msa0100240:CDS | 40.0% | |
| CAGCCAAGTTGTTGGATTTA+AGG | - | chr1_3:6768989-6769008 | Msa0100240:intron | 40.0% | |
| CCACCTTAAATCCAACAACT+TGG | + | chr1_3:6768995-6769014 | None:intergenic | 40.0% | |
| CCAAGTTGTTGGATTTAAGG+TGG | - | chr1_3:6768992-6769011 | Msa0100240:intron | 40.0% | |
| ! | GAAAACTCAGGGTGTTAACT+TGG | - | chr1_3:6769059-6769078 | Msa0100240:intron | 40.0% |
| AGTCAAGTTTGAATCTGGCA+AGG | - | chr1_3:6769092-6769111 | Msa0100240:intron | 40.0% | |
| TGATCTAGAGATACCGGTAA+AGG | - | chr1_3:6769302-6769321 | Msa0100240:CDS | 40.0% | |
| AACTGTCAACATTGGTCGAA+GGG | - | chr1_3:6769383-6769402 | Msa0100240:CDS | 40.0% | |
| GATGACAGTTGTTCAGAAGT+TGG | + | chr1_3:6769441-6769460 | None:intergenic | 40.0% | |
| ACTGTCATCCTTGAATCTGA+AGG | - | chr1_3:6769452-6769471 | Msa0100240:intron | 40.0% | |
| TCATCCTTGAATCTGAAGGA+AGG | - | chr1_3:6769456-6769475 | Msa0100240:intron | 40.0% | |
| CATCCTTGAATCTGAAGGAA+GGG | - | chr1_3:6769457-6769476 | Msa0100240:intron | 40.0% | |
| CATAGGTGTAGAGAAACAGA+AGG | + | chr1_3:6769496-6769515 | None:intergenic | 40.0% | |
| ! | CTGTTTCTCTACACCTATGA+TGG | - | chr1_3:6769497-6769516 | Msa0100240:intron | 40.0% |
| GTTTCTCTACACCTATGATG+GGG | - | chr1_3:6769499-6769518 | Msa0100240:intron | 40.0% | |
| !! | GGCCTCGTTTTTATCTAACT+AGG | - | chr1_3:6769755-6769774 | Msa0100240:intron | 40.0% |
| GACTGATTACAATGAGTGCA+TGG | - | chr1_3:6769987-6770006 | Msa0100240:intron | 40.0% | |
| ATCTTACCTTTCTCTCGAAG+AGG | - | chr1_3:6770053-6770072 | Msa0100240:intron | 40.0% | |
| AAGTCCATCATGTATTGTGG+AGG | - | chr1_3:6770145-6770164 | Msa0100240:intron | 40.0% | |
| AGTCCATCATGTATTGTGGA+GGG | - | chr1_3:6770146-6770165 | Msa0100240:intron | 40.0% | |
| TAGGATTAACTCCTAGACCT+TGG | - | chr1_3:6770290-6770309 | Msa0100240:CDS | 40.0% | |
| ATGTGGATGGGACTATTACA+AGG | - | chr1_3:6770508-6770527 | Msa0100240:intron | 40.0% | |
| GTTGAAATATTGACACCGAG+TGG | - | chr1_3:6770959-6770978 | Msa0100240:intron | 40.0% | |
| TAAGGAACCATTGATCCACT+CGG | + | chr1_3:6770977-6770996 | None:intergenic | 40.0% | |
| TGGCATGGATATTCCTTGTT+GGG | + | chr1_3:6771023-6771042 | None:intergenic | 40.0% | |
| ATGGCATGGATATTCCTTGT+TGG | + | chr1_3:6771024-6771043 | None:intergenic | 40.0% | |
| TAGAGAGATTCATCATGGCA+TGG | + | chr1_3:6771038-6771057 | None:intergenic | 40.0% | |
| !! | AGCTCTAGAGAGATTCATCA+TGG | + | chr1_3:6771043-6771062 | None:intergenic | 40.0% |
| TTCCCTGCTCTTAAGAGAAT+CGG | - | chr1_3:6771246-6771265 | Msa0100240:intron | 40.0% | |
| ATCCGATTCTCTTAAGAGCA+GGG | + | chr1_3:6771251-6771270 | None:intergenic | 40.0% | |
| TATCCGATTCTCTTAAGAGC+AGG | + | chr1_3:6771252-6771271 | None:intergenic | 40.0% | |
| !! | TGAATGCTACTGGCTAGTTT+AGG | + | chr1_3:6771722-6771741 | None:intergenic | 40.0% |
| GCATGATGATAGATGAACTC+CGG | - | chr1_3:6772003-6772022 | Msa0100240:intron | 40.0% | |
| ! | CCAGAACAAAGGCATATATC+TGG | + | chr1_3:6772088-6772107 | None:intergenic | 40.0% |
| CCAGATATATGCCTTTGTTC+TGG | - | chr1_3:6772085-6772104 | Msa0100240:intron | 40.0% | |
| GGTCAATTCATGCCTTTAGT+TGG | - | chr1_3:6772183-6772202 | Msa0100240:intron | 40.0% | |
| AACCAGAAGATTGTTGGTGT+GGG | + | chr1_3:6772512-6772531 | None:intergenic | 40.0% | |
| AAACCAGAAGATTGTTGGTG+TGG | + | chr1_3:6772513-6772532 | None:intergenic | 40.0% | |
| TTTCCTGTGATGTGTGGAAT+AGG | + | chr1_3:6772577-6772596 | None:intergenic | 40.0% | |
| TTCCACACATCACAGGAAAA+TGG | - | chr1_3:6772578-6772597 | Msa0100240:intron | 40.0% | |
| !! | GAGCACTGAGAAAAAGTATC+TGG | + | chr1_3:6772607-6772626 | None:intergenic | 40.0% |
| TAGGAATTGTCTGGTGTGAT+GGG | + | chr1_3:6772645-6772664 | None:intergenic | 40.0% | |
| ATAGGAATTGTCTGGTGTGA+TGG | + | chr1_3:6772646-6772665 | None:intergenic | 40.0% | |
| TCACCTGGTTAAGGTTGAAT+AGG | + | chr1_3:6772664-6772683 | None:intergenic | 40.0% | |
| GAAATTACAACAGGACCATC+TGG | + | chr1_3:6772800-6772819 | None:intergenic | 40.0% | |
| TTTAATGCTTCCAGGACATC+AGG | - | chr1_3:6773097-6773116 | Msa0100240:CDS | 40.0% | |
| TTAATGCTTCCAGGACATCA+GGG | - | chr1_3:6773098-6773117 | Msa0100240:CDS | 40.0% | |
| CTTTAGCGATTCCAACCTTA+AGG | + | chr1_3:6773194-6773213 | None:intergenic | 40.0% | |
| CTTAAGGTTGGAATCGCTAA+AGG | - | chr1_3:6773192-6773211 | Msa0100240:CDS | 40.0% | |
| ACTACATGAGAACGGAAGTT+TGG | + | chr1_3:6773305-6773324 | None:intergenic | 40.0% | |
| ! | GTAGTCATGTCTAAGGTTTC+AGG | - | chr1_3:6773320-6773339 | Msa0100240:intron | 40.0% |
| TGATTGAATCTAGACCTACG+TGG | - | chr1_3:6773860-6773879 | Msa0100240:CDS | 40.0% | |
| CACACATACTAAAACCACGT+AGG | + | chr1_3:6773877-6773896 | None:intergenic | 40.0% | |
| !!! | CTACGTGGTTTTAGTATGTG+TGG | - | chr1_3:6773875-6773894 | Msa0100240:CDS | 40.0% |
| CGCTCTATTTGATCTACTCT+CGG | + | chr1_3:6773936-6773955 | None:intergenic | 40.0% | |
| AGCCTTCCTTTGTAGCAATT+GGG | + | chr1_3:6773962-6773981 | None:intergenic | 40.0% | |
| TAGCCTTCCTTTGTAGCAAT+TGG | + | chr1_3:6773963-6773982 | None:intergenic | 40.0% | |
| !! | CTGATGTTAACTTGTGTTGG+TGG | - | chr1_3:6774378-6774397 | Msa0100240:five_prime_UTR | 40.0% |
| TTAAACAAGTCCAGTTGCAC+CGG | - | chr1_3:6774628-6774647 | Msa0100240:five_prime_UTR | 40.0% | |
| ! | ACCTTTGAAGGAAGCTACGT+CGG | + | chr1_3:6768016-6768035 | None:intergenic | 45.0% |
| ACCCACCAAACAACCTTTGA+AGG | + | chr1_3:6768028-6768047 | None:intergenic | 45.0% | |
| TAATATCCGTGGGAGATGGT+GGG | + | chr1_3:6768051-6768070 | None:intergenic | 45.0% | |
| ATAATATCCGTGGGAGATGG+TGG | + | chr1_3:6768052-6768071 | None:intergenic | 45.0% | |
| AGAACAACATGCAAGCTTGG+GGG | - | chr1_3:6768434-6768453 | Msa0100240:intron | 45.0% | |
| !! | CGTGGTGTTAGCAGTTTTTC+CGG | - | chr1_3:6768478-6768497 | Msa0100240:intron | 45.0% |
| !! | GTGGTGTTAGCAGTTTTTCC+GGG | - | chr1_3:6768479-6768498 | Msa0100240:intron | 45.0% |
| ! | TCAGGGTGTTAACTTGGACA+AGG | - | chr1_3:6769065-6769084 | Msa0100240:intron | 45.0% |
| !! | GGGTGTTGATCTAGAGATAC+CGG | - | chr1_3:6769296-6769315 | Msa0100240:intron | 45.0% |
| GAGATACCGGTAAAGGATTG+TGG | - | chr1_3:6769309-6769328 | Msa0100240:CDS | 45.0% | |
| GAACTGTCAACATTGGTCGA+AGG | - | chr1_3:6769382-6769401 | Msa0100240:CDS | 45.0% | |
| TCTCCCTTCCTTCAGATTCA+AGG | + | chr1_3:6769463-6769482 | None:intergenic | 45.0% | |
| CGTAAACCTCTTCGAGAGAA+AGG | + | chr1_3:6770062-6770081 | None:intergenic | 45.0% | |
| CATCCCTCCACAATACATGA+TGG | + | chr1_3:6770152-6770171 | None:intergenic | 45.0% | |
| TCATGTATTGTGGAGGGATG+TGG | - | chr1_3:6770152-6770171 | Msa0100240:intron | 45.0% | |
| GATGGGACTATTACAAGGTG+AGG | - | chr1_3:6770513-6770532 | Msa0100240:intron | 45.0% | |
| CTAACTGACAGCTCTCATCT+AGG | + | chr1_3:6770816-6770835 | None:intergenic | 45.0% | |
| CTAGATGAGAGCTGTCAGTT+AGG | - | chr1_3:6770814-6770833 | Msa0100240:intron | 45.0% | |
| ATTGACACCGAGTGGATCAA+TGG | - | chr1_3:6770967-6770986 | Msa0100240:intron | 45.0% | |
| TGCCTTTAGTTGGGATTGAC+TGG | - | chr1_3:6772193-6772212 | Msa0100240:intron | 45.0% | |
| GACCAGTCAATCCCAACTAA+AGG | + | chr1_3:6772198-6772217 | None:intergenic | 45.0% | |
| CTGCGTGTTCTTAAAACACG+TGG | - | chr1_3:6772354-6772373 | Msa0100240:intron | 45.0% | |
| TGTGATGTGTGGAATAGGCA+AGG | + | chr1_3:6772572-6772591 | None:intergenic | 45.0% | |
| TTGCCTATTCCACACATCAC+AGG | - | chr1_3:6772571-6772590 | Msa0100240:intron | 45.0% | |
| !! | AGCCATTTTCCTGTGATGTG+TGG | + | chr1_3:6772583-6772602 | None:intergenic | 45.0% |
| GATGGGAAAGTCTTACCAGA+TGG | - | chr1_3:6772782-6772801 | Msa0100240:intron | 45.0% | |
| CCTGTTGTAATTTCCCCTGA+CGG | - | chr1_3:6772806-6772825 | Msa0100240:intron | 45.0% | |
| AGAAGGAAAAAGTCCGTCAG+GGG | + | chr1_3:6772822-6772841 | None:intergenic | 45.0% | |
| GAGAAGGAAAAAGTCCGTCA+GGG | + | chr1_3:6772823-6772842 | None:intergenic | 45.0% | |
| AGAGAAGGAAAAAGTCCGTC+AGG | + | chr1_3:6772824-6772843 | None:intergenic | 45.0% | |
| ACTATAGAAGGGGAAGAGTG+AGG | + | chr1_3:6772890-6772909 | None:intergenic | 45.0% | |
| TCTCTTCATGCTCTCGTGAA+CGG | - | chr1_3:6773390-6773409 | Msa0100240:CDS | 45.0% | |
| CCAATGTTCAGCAAGCACAA+GGG | + | chr1_3:6773542-6773561 | None:intergenic | 45.0% | |
| ACCAATGTTCAGCAAGCACA+AGG | + | chr1_3:6773543-6773562 | None:intergenic | 45.0% | |
| TGCAGGAGGATTTCAATTCC+TGG | - | chr1_3:6773563-6773582 | Msa0100240:CDS | 45.0% | |
| CTCAATCATCTGTCTGGTGA+AGG | - | chr1_3:6773644-6773663 | Msa0100240:CDS | 45.0% | |
| AATCATCTGTCTGGTGAAGG+TGG | - | chr1_3:6773647-6773666 | Msa0100240:CDS | 45.0% | |
| !!! | CGTGGTTTTAGTATGTGTGG+AGG | - | chr1_3:6773878-6773897 | Msa0100240:CDS | 45.0% |
| AGCCCAATTGCTACAAAGGA+AGG | - | chr1_3:6773957-6773976 | Msa0100240:CDS | 45.0% | |
| ACCATCTGACCTCACTTAGT+AGG | - | chr1_3:6774082-6774101 | Msa0100240:exon | 45.0% | |
| CCATCTGACCTCACTTAGTA+GGG | - | chr1_3:6774083-6774102 | Msa0100240:exon | 45.0% | |
| TGACCTCACTTAGTAGGGTA+AGG | - | chr1_3:6774088-6774107 | Msa0100240:exon | 45.0% | |
| ATGCCTTACCCTACTAAGTG+AGG | + | chr1_3:6774094-6774113 | None:intergenic | 45.0% | |
| CAATTGGAATTCCGCAACGG+TGG | - | chr1_3:6767902-6767921 | Msa0100240:three_prime_UTR | 50.0% | |
| ACCGACGTAGCTTCCTTCAA+AGG | - | chr1_3:6768012-6768031 | Msa0100240:intron | 50.0% | |
| ATGCAAGCTTGGGGGAGATT+AGG | - | chr1_3:6768442-6768461 | Msa0100240:intron | 50.0% | |
| ATATCAACCGCACCGCCAAA+CGG | + | chr1_3:6768514-6768533 | None:intergenic | 50.0% | |
| GAAGGCGGCGAAAAGAGAAA+AGG | - | chr1_3:6768612-6768631 | Msa0100240:intron | 50.0% | |
| ! | CAGTGGTGATGCAGATTCAG+CGG | - | chr1_3:6768951-6768970 | Msa0100240:intron | 50.0% |
| TGAGGTTGCAGCCAAGTTGT+TGG | - | chr1_3:6768981-6769000 | Msa0100240:intron | 50.0% | |
| TACAACTGTGCAGCTACCTG+AGG | - | chr1_3:6769125-6769144 | Msa0100240:CDS | 50.0% | |
| ! | CTACACCTATGATGGGGATG+CGG | - | chr1_3:6769505-6769524 | Msa0100240:intron | 50.0% |
| GGAGCTGTTGGATGAAGATC+AGG | - | chr1_3:6769884-6769903 | Msa0100240:CDS | 50.0% | |
| TGTTGCAGGTCAGACGTTCT+AGG | - | chr1_3:6772162-6772181 | Msa0100240:intron | 50.0% | |
| GAAGATTGTTGGTGTGGGCA+GGG | + | chr1_3:6772507-6772526 | None:intergenic | 50.0% | |
| AGAAGATTGTTGGTGTGGGC+AGG | + | chr1_3:6772508-6772527 | None:intergenic | 50.0% | |
| TGCCCACACCAACAATCTTC+TGG | - | chr1_3:6772507-6772526 | Msa0100240:intron | 50.0% | |
| CAGTGCTCGTGCAATTTCTC+AGG | - | chr1_3:6772619-6772638 | Msa0100240:intron | 50.0% | |
| CCGTCAGGGGAAATTACAAC+AGG | + | chr1_3:6772809-6772828 | None:intergenic | 50.0% | |
| TGAATTCGTGAGGAGCTCTG+CGG | + | chr1_3:6772986-6773005 | None:intergenic | 50.0% | |
| !! | GAAAAAGTGCCCTGATGTCC+TGG | + | chr1_3:6773110-6773129 | None:intergenic | 50.0% |
| TGCTCAGATGAGTCTGTAGG+GGG | + | chr1_3:6773423-6773442 | None:intergenic | 50.0% | |
| CTGCTCAGATGAGTCTGTAG+GGG | + | chr1_3:6773424-6773443 | None:intergenic | 50.0% | |
| CCTGCTCAGATGAGTCTGTA+GGG | + | chr1_3:6773425-6773444 | None:intergenic | 50.0% | |
| ACCTGCTCAGATGAGTCTGT+AGG | + | chr1_3:6773426-6773445 | None:intergenic | 50.0% | |
| ! | CCCTTGTGCTTGCTGAACAT+TGG | - | chr1_3:6773539-6773558 | Msa0100240:CDS | 50.0% |
| ! | GCTTGCTGAACATTGGTTGC+AGG | - | chr1_3:6773546-6773565 | Msa0100240:CDS | 50.0% |
| ! | TGCTGAACATTGGTTGCAGG+AGG | - | chr1_3:6773549-6773568 | Msa0100240:CDS | 50.0% |
| GGGCAACTTCCAGAAATTCC+AGG | + | chr1_3:6773584-6773603 | None:intergenic | 50.0% | |
| CTATGTCTAGACCCCAGCAT+AGG | - | chr1_3:6773729-6773748 | Msa0100240:CDS | 50.0% | |
| CCCTACTAAGTGAGGTCAGA+TGG | + | chr1_3:6774086-6774105 | None:intergenic | 50.0% | |
| TGGTAATCATCCGGTGCAAC+TGG | + | chr1_3:6774641-6774660 | None:intergenic | 50.0% | |
| TTCCGCAACGGTGGTGATAG+CGG | - | chr1_3:6767911-6767930 | Msa0100240:three_prime_UTR | 55.0% | |
| !! | GTGGTGATAGCGGTGGTGAT+TGG | - | chr1_3:6767921-6767940 | Msa0100240:three_prime_UTR | 55.0% |
| GCTACGTCGGTGAAAGCAAC+AGG | + | chr1_3:6768003-6768022 | None:intergenic | 55.0% | |
| CAAGCTTGGGGGAGATTAGG+AGG | - | chr1_3:6768445-6768464 | Msa0100240:intron | 55.0% | |
| GCACCGCCAAACGGAAGAAA+CGG | + | chr1_3:6768505-6768524 | None:intergenic | 55.0% | |
| GTTTCTTCCGTTTGGCGGTG+CGG | - | chr1_3:6768504-6768523 | Msa0100240:intron | 55.0% | |
| TCTGCATCACCACTGGACCT+TGG | + | chr1_3:6768946-6768965 | None:intergenic | 55.0% | |
| CGCTGAATCTGCATCACCAC+TGG | + | chr1_3:6768953-6768972 | None:intergenic | 55.0% | |
| TAGCCTGTTTGCGCAGTGCT+TGG | - | chr1_3:6771487-6771506 | Msa0100240:intron | 55.0% | |
| ! | AGACCAAGCACTGCGCAAAC+AGG | + | chr1_3:6771493-6771512 | None:intergenic | 55.0% |
| ! | GGGATTGACTGGTCACAGAC+AGG | - | chr1_3:6772204-6772223 | Msa0100240:intron | 55.0% |
| TGTTGGTGTGGGCAGGGTAA+AGG | + | chr1_3:6772501-6772520 | None:intergenic | 55.0% | |
| GCTCAGATGAGTCTGTAGGG+GGG | + | chr1_3:6773422-6773441 | None:intergenic | 55.0% | |
| CCCTACAGACTCATCTGAGC+AGG | - | chr1_3:6773422-6773441 | Msa0100240:CDS | 55.0% | |
| GCGCAGCCCAATTGCTACAA+AGG | - | chr1_3:6773953-6773972 | Msa0100240:CDS | 55.0% | |
| CACCGCTATCACCACCGTTG+CGG | + | chr1_3:6767916-6767935 | None:intergenic | 60.0% | |
| TCCGGGCCGTTTCTTCCGTT+TGG | - | chr1_3:6768496-6768515 | Msa0100240:intron | 60.0% | |
| GCCAAACGGAAGAAACGGCC+CGG | + | chr1_3:6768500-6768519 | None:intergenic | 60.0% | |
| GGGCCGTTTCTTCCGTTTGG+CGG | - | chr1_3:6768499-6768518 | Msa0100240:intron | 60.0% | |
| GTATTGGGGCCAAGGTCCAG+TGG | - | chr1_3:6768934-6768953 | Msa0100240:CDS | 60.0% | |
| AGATTCAGCGGAGCGTGCTG+AGG | - | chr1_3:6768963-6768982 | Msa0100240:intron | 60.0% | |
| ! | ACCTATGATGGGGATGCGGC+AGG | - | chr1_3:6769509-6769528 | Msa0100240:intron | 60.0% |
| ACCTGCCGCATCCCCATCAT+AGG | + | chr1_3:6769513-6769532 | None:intergenic | 60.0% | |
| !! | CGCAACGGTGGTGATAGCGG+TGG | - | chr1_3:6767914-6767933 | Msa0100240:three_prime_UTR | 65.0% |
| GTGGGTCCCACCATCTCCCA+CGG | - | chr1_3:6768042-6768061 | Msa0100240:three_prime_UTR | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 6767851 | 6774685 | 6767851 | ID=Msa0100240;Name=Msa0100240 |
| chr1_3 | mRNA | 6767851 | 6774685 | 6767851 | ID=Msa0100240-mRNA-1;Parent=Msa0100240;Name=Msa0100240-mRNA-1;_AED=0.16;_eAED=0.16;_QI=377|0.91|0.92|1|0.75|0.61|13|408|540 |
| chr1_3 | exon | 6767851 | 6768003 | 6767851 | ID=Msa0100240-mRNA-1:exon:2567;Parent=Msa0100240-mRNA-1 |
| chr1_3 | exon | 6768033 | 6768195 | 6768033 | ID=Msa0100240-mRNA-1:exon:2566;Parent=Msa0100240-mRNA-1 |
| chr1_3 | exon | 6768832 | 6768968 | 6768832 | ID=Msa0100240-mRNA-1:exon:2565;Parent=Msa0100240-mRNA-1 |
| chr1_3 | exon | 6769093 | 6769212 | 6769093 | ID=Msa0100240-mRNA-1:exon:2564;Parent=Msa0100240-mRNA-1 |
| chr1_3 | exon | 6769297 | 6769425 | 6769297 | ID=Msa0100240-mRNA-1:exon:2563;Parent=Msa0100240-mRNA-1 |
| chr1_3 | exon | 6769514 | 6769557 | 6769514 | ID=Msa0100240-mRNA-1:exon:2562;Parent=Msa0100240-mRNA-1 |
| chr1_3 | exon | 6769682 | 6769754 | 6769682 | ID=Msa0100240-mRNA-1:exon:2561;Parent=Msa0100240-mRNA-1 |
| chr1_3 | exon | 6769857 | 6769943 | 6769857 | ID=Msa0100240-mRNA-1:exon:2560;Parent=Msa0100240-mRNA-1 |
| chr1_3 | exon | 6770282 | 6770366 | 6770282 | ID=Msa0100240-mRNA-1:exon:2559;Parent=Msa0100240-mRNA-1 |
| chr1_3 | exon | 6772007 | 6772080 | 6772007 | ID=Msa0100240-mRNA-1:exon:2558;Parent=Msa0100240-mRNA-1 |
| chr1_3 | exon | 6773006 | 6773266 | 6773006 | ID=Msa0100240-mRNA-1:exon:2557;Parent=Msa0100240-mRNA-1 |
| chr1_3 | exon | 6773390 | 6774161 | 6773390 | ID=Msa0100240-mRNA-1:exon:2556;Parent=Msa0100240-mRNA-1 |
| chr1_3 | exon | 6774376 | 6774685 | 6774376 | ID=Msa0100240-mRNA-1:exon:2555;Parent=Msa0100240-mRNA-1 |
| chr1_3 | five_prime_UTR | 6774376 | 6774685 | 6774376 | ID=Msa0100240-mRNA-1:five_prime_utr;Parent=Msa0100240-mRNA-1 |
| chr1_3 | five_prime_UTR | 6774095 | 6774161 | 6774095 | ID=Msa0100240-mRNA-1:five_prime_utr;Parent=Msa0100240-mRNA-1 |
| chr1_3 | CDS | 6773390 | 6774094 | 6773390 | ID=Msa0100240-mRNA-1:cds;Parent=Msa0100240-mRNA-1 |
| chr1_3 | CDS | 6773006 | 6773266 | 6773006 | ID=Msa0100240-mRNA-1:cds;Parent=Msa0100240-mRNA-1 |
| chr1_3 | CDS | 6772007 | 6772080 | 6772007 | ID=Msa0100240-mRNA-1:cds;Parent=Msa0100240-mRNA-1 |
| chr1_3 | CDS | 6770282 | 6770366 | 6770282 | ID=Msa0100240-mRNA-1:cds;Parent=Msa0100240-mRNA-1 |
| chr1_3 | CDS | 6769857 | 6769943 | 6769857 | ID=Msa0100240-mRNA-1:cds;Parent=Msa0100240-mRNA-1 |
| chr1_3 | CDS | 6769682 | 6769754 | 6769682 | ID=Msa0100240-mRNA-1:cds;Parent=Msa0100240-mRNA-1 |
| chr1_3 | CDS | 6769514 | 6769557 | 6769514 | ID=Msa0100240-mRNA-1:cds;Parent=Msa0100240-mRNA-1 |
| chr1_3 | CDS | 6769297 | 6769425 | 6769297 | ID=Msa0100240-mRNA-1:cds;Parent=Msa0100240-mRNA-1 |
| chr1_3 | CDS | 6769093 | 6769212 | 6769093 | ID=Msa0100240-mRNA-1:cds;Parent=Msa0100240-mRNA-1 |
| chr1_3 | CDS | 6768924 | 6768968 | 6768924 | ID=Msa0100240-mRNA-1:cds;Parent=Msa0100240-mRNA-1 |
| chr1_3 | three_prime_UTR | 6768832 | 6768923 | 6768832 | ID=Msa0100240-mRNA-1:three_prime_utr;Parent=Msa0100240-mRNA-1 |
| chr1_3 | three_prime_UTR | 6768033 | 6768195 | 6768033 | ID=Msa0100240-mRNA-1:three_prime_utr;Parent=Msa0100240-mRNA-1 |
| chr1_3 | three_prime_UTR | 6767851 | 6768003 | 6767851 | ID=Msa0100240-mRNA-1:three_prime_utr;Parent=Msa0100240-mRNA-1 |
| Gene Sequence |
| Protein sequence |
