AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0485500


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0485500 MtrunA17_Chr4g0057771 99.588 243 1 0 1 243 1 243 2.18e-180 494
Msa0485500 MtrunA17_Chr4g0017231 37.559 213 122 4 31 242 89 291 1.20e-42 146
Msa0485500 MtrunA17_Chr2g0305051 37.778 225 123 5 23 243 66 277 1.35e-40 146
Msa0485500 MtrunA17_Chr1g0181801 31.683 202 120 4 31 219 113 309 2.03e-28 110
Msa0485500 MtrunA17_Chr7g0263541 29.703 202 124 4 31 219 38 234 1.69e-24 98.2
Msa0485500 MtrunA17_Chr8g0337051 25.714 210 123 4 32 241 24 200 6.11e-19 82.0
Msa0485500 MtrunA17_Chr5g0428971 27.143 210 120 4 33 242 35 211 4.03e-17 77.4
Msa0485500 MtrunA17_Chr4g0018221 26.667 210 121 4 33 242 58 234 3.70e-16 75.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0485500 AT5G63400.1 81.743 241 44 0 2 242 6 246 1.65e-152 424
Msa0485500 AT5G50370.1 79.654 231 47 0 2 232 7 237 6.79e-144 402
Msa0485500 AT5G50370.2 82.381 210 37 0 2 211 7 216 5.04e-135 379
Msa0485500 AT5G63400.2 85.000 180 27 0 2 181 6 185 1.63e-116 331
Msa0485500 AT5G35170.2 34.821 224 135 4 21 243 71 284 1.25e-38 141
Msa0485500 AT5G35170.1 34.821 224 135 4 21 243 71 284 1.42e-38 141
Msa0485500 AT5G47840.1 35.047 214 128 4 31 243 66 269 1.59e-36 130
Msa0485500 AT5G47840.2 38.333 180 102 3 31 209 66 237 2.20e-34 124
Msa0485500 AT2G37250.1 30.693 202 122 4 31 219 53 249 4.11e-26 103
Msa0485500 AT2G39270.1 30.603 232 132 6 10 219 38 262 5.61e-25 100
Msa0485500 AT5G26667.3 27.064 218 126 4 25 242 10 194 3.35e-21 88.2
Msa0485500 AT5G26667.2 27.064 218 126 4 25 242 10 194 3.35e-21 88.2
Msa0485500 AT5G26667.4 27.064 218 126 4 25 242 10 194 3.35e-21 88.2
Msa0485500 AT5G26667.1 27.064 218 126 4 25 242 10 194 4.80e-21 88.2
Msa0485500 AT3G60180.1 26.540 211 122 4 32 242 24 201 7.10e-19 82.0
Msa0485500 AT3G60180.2 26.540 211 122 4 32 242 24 201 7.10e-19 82.0
Msa0485500 AT4G25280.1 29.381 194 104 4 33 226 57 217 1.23e-18 82.8
Msa0485500 AT4G25280.2 29.381 194 104 4 33 226 57 217 1.23e-18 82.8

Find 80 sgRNAs with CRISPR-Local

Find 275 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTGCTCCTCCCAAGGTTTC+TGG 0.086280 3_4:-3195110 Msa0485500:CDS
TATTGATTACTATTCGAAAA+AGG 0.219468 3_4:-3193703 Msa0485500:CDS
ATCCTTGAGGAGCGAATTAC+TGG 0.241993 3_4:-3195176 Msa0485500:CDS
AAGAGAAGAGGAGGGTAATT+TGG 0.263670 3_4:+3197633 None:intergenic
TGTGCTTGGACCACAGTTCT+TGG 0.275665 3_4:+3195410 None:intergenic
ACCTCAGATGTCACCTCTTT+GGG 0.277455 3_4:+3193648 None:intergenic
CAGAAAGGTTTCATTCTTGA+TGG 0.304326 3_4:-3195437 Msa0485500:CDS
GACCTCAGATGTCACCTCTT+TGG 0.306316 3_4:+3193647 None:intergenic
TTGCTCCTCCCAAGGTTTCT+GGG 0.328170 3_4:-3195109 Msa0485500:CDS
AATAAGACGTTTGTCAGGTT+TGG 0.344040 3_4:+3197423 None:intergenic
TACCCAGTCGCCAATCATTA+AGG 0.344864 3_4:-3195727 Msa0485500:CDS
TGATGAGATGCTGCAGAAAC+AGG 0.374899 3_4:-3195243 Msa0485500:CDS
GTTTCTGATGACTTGGTTGT+TGG 0.382058 3_4:-3195494 Msa0485500:CDS
TGGTCAAGAGACAATTCATT+TGG 0.407122 3_4:+3193404 None:intergenic
GATGCAGGCCCACCTGGATC+TGG 0.415044 3_4:-3195756 Msa0485500:intron
TTTATACTTTGCGTTAGGTT+GGG 0.426389 3_4:+3197660 None:intergenic
TGCTTATGCCACTTGGCTAC+TGG 0.433342 3_4:-3195696 Msa0485500:CDS
ATTTAAATAAAAGTAGAAAC+TGG 0.437040 3_4:+3193544 None:intergenic
TGGGAGGAGCAAACTTTGTA+TGG 0.440423 3_4:+3195120 None:intergenic
TCATCCTTGCGCTGGATAAG+AGG 0.449192 3_4:+3194533 None:intergenic
TAGAGTTCCCCTTGGACCCT+CGG 0.458256 3_4:-3193606 Msa0485500:three_prime_UTR
ATCCTTAATGATTGGCGACT+GGG 0.472147 3_4:+3195725 None:intergenic
GGTAATGGCGAGTTCTAACT+TGG 0.473036 3_4:-3197503 Msa0485500:exon
GTTTCACAGGCAAACTGAAC+CGG 0.476704 3_4:-3194477 Msa0485500:intron
ATCATCAACCCCAGAAACCT+TGG 0.477570 3_4:+3195100 None:intergenic
AGAGTTCCCCTTGGACCCTC+GGG 0.478030 3_4:-3193605 Msa0485500:three_prime_UTR
AAGACGTTTGTCAGGTTTGG+AGG 0.481705 3_4:+3197426 None:intergenic
AGTTCGATCCCGAGGGTCCA+AGG 0.486880 3_4:+3193597 None:intergenic
AAAAGAGAAAAGAGAAGAGG+AGG 0.487908 3_4:+3197624 None:intergenic
AAAGAGAAAAGAGAAGAGGA+GGG 0.489132 3_4:+3197625 None:intergenic
AAGGCAATACCTTCTGTGCT+TGG 0.492764 3_4:+3195396 None:intergenic
TGGTAGGTTCTGCCACTGGA+TGG 0.498072 3_4:+3195140 None:intergenic
GCATTTGCAGCGAAGTTGAA+AGG 0.498268 3_4:+3193501 None:intergenic
TGCTCCTCCCAAGGTTTCTG+GGG 0.498541 3_4:-3195108 Msa0485500:CDS
CATCCTTAATGATTGGCGAC+TGG 0.500176 3_4:+3195724 None:intergenic
ACGAGAATAAGACGTTTGTC+AGG 0.504583 3_4:+3197418 None:intergenic
CAGTACTCATCCTTAATGAT+TGG 0.508765 3_4:+3195717 None:intergenic
AGCGAAAGAAGCTATGGAAA+AGG 0.511818 3_4:-3195625 Msa0485500:intron
CAAGACTCGAGGCGTTTCAC+AGG 0.520486 3_4:-3194490 Msa0485500:CDS
CTGCAGTGTCATCCTTGCGC+TGG 0.520703 3_4:+3194525 None:intergenic
AGGAGCAAACTTTGTATGGT+AGG 0.522477 3_4:+3195124 None:intergenic
AGAACTTGTTTCTGATGACT+TGG 0.528968 3_4:-3195501 Msa0485500:CDS
GGCCCACCTGGATCTGGAAA+AGG 0.531197 3_4:-3195750 Msa0485500:CDS
CATTTGCAGCGAAGTTGAAA+GGG 0.532507 3_4:+3193502 None:intergenic
GTTCGATCCCGAGGGTCCAA+GGG 0.534041 3_4:+3193598 None:intergenic
TCAGATGTCACCTCTTTGGG+AGG 0.540707 3_4:+3193651 None:intergenic
TACAAAGTTTGCTCCTCCCA+AGG 0.544011 3_4:-3195117 Msa0485500:CDS
TGTATGGTAGGTTCTGCCAC+TGG 0.548293 3_4:+3195136 None:intergenic
TATTAAAGCGAAAGAAGCTA+TGG 0.555441 3_4:-3195631 Msa0485500:CDS
GTAGCAGCTAAAACCCCTCT+TGG 0.556590 3_4:-3195654 Msa0485500:CDS
TCATCAACCCCAGAAACCTT+GGG 0.557308 3_4:+3195101 None:intergenic
CTTTCGCTTTAATACCAAGA+GGG 0.558792 3_4:+3195640 None:intergenic
TGAGTACTGCTTATGCCACT+TGG 0.559219 3_4:-3195703 Msa0485500:CDS
ATTTGAAAACACCTGTGTAA+TGG 0.560439 3_4:+3193384 None:intergenic
ACGAAGACATATATACTACT+TGG 0.561089 3_4:-3197725 Msa0485500:five_prime_UTR
AAGAAACCGTCATGTCAGAA+AGG 0.567615 3_4:-3195452 Msa0485500:CDS
ATGAAACCTTTCTGACATGA+CGG 0.573422 3_4:+3195446 None:intergenic
GACAAACGTCTTATTCTCGT+TGG 0.578794 3_4:-3197415 Msa0485500:intron
AACTGTGGTCCAAGCACAGA+AGG 0.583530 3_4:-3195405 Msa0485500:intron
CAGCAGCACAGCAACGGTAA+TGG 0.585962 3_4:-3197518 Msa0485500:exon
GTCCAGTAATTCGCTCCTCA+AGG 0.587235 3_4:+3195174 None:intergenic
GGTAGGTTCTGCCACTGGAT+GGG 0.601889 3_4:+3195141 None:intergenic
TTTCGCTTTAATACCAAGAG+GGG 0.604617 3_4:+3195641 None:intergenic
TAAGCAGCAGTTCGATCCCG+AGG 0.618701 3_4:+3193589 None:intergenic
AGGAGCGAATTACTGGACGC+TGG 0.631202 3_4:-3195169 Msa0485500:CDS
AATTGATGACGCAATCCTTG+AGG 0.634543 3_4:-3195189 Msa0485500:CDS
TGAGCCTCTTATCCAGCGCA+AGG 0.634937 3_4:-3194537 Msa0485500:CDS
TTGTCTCTTGACCATTACAC+AGG 0.638049 3_4:-3193395 Msa0485500:three_prime_UTR
CGCTGGATACACCCATCCAG+TGG 0.638248 3_4:-3195152 Msa0485500:CDS
TGTCTCAATAGAGTTCCCCT+TGG 0.639790 3_4:-3193614 Msa0485500:exon
TCCCAAAGAGGTGACATCTG+AGG 0.649172 3_4:-3193649 Msa0485500:CDS
GATGAGATGCTGCAGAAACA+GGG 0.659071 3_4:-3195242 Msa0485500:CDS
TTCGATCCCGAGGGTCCAAG+GGG 0.659628 3_4:+3193599 None:intergenic
CTGTCACAGCAGCACAGCAA+CGG 0.660652 3_4:-3197524 Msa0485500:five_prime_UTR
AAGCAGCAGTTCGATCCCGA+GGG 0.667947 3_4:+3193590 None:intergenic
TGTTCTTAAGTCAAGACTCG+AGG 0.677007 3_4:-3194501 Msa0485500:CDS
ACATATCACCAGTAGCCAAG+TGG 0.677362 3_4:+3195688 None:intergenic
TCAGACATGAGATCAACAGA+AGG 0.680744 3_4:+3197472 None:intergenic
TCTTTCGCTTTAATACCAAG+AGG 0.695667 3_4:+3195639 None:intergenic
TCAACCCCAGAAACCTTGGG+AGG 0.711556 3_4:+3195104 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATATTAGATTATCTATTTTA+TGG + chr3_4:3195429-3195448 None:intergenic 10.0%
!!! TTTTTTTTGTTTGAAATATT+GGG - chr3_4:3195623-3195642 Msa0485500:intron 10.0%
!! AAATCAATTATAAAGAAAGA+AGG + chr3_4:3194777-3194796 None:intergenic 15.0%
!! ATATTATACTACAAATATTC+AGG - chr3_4:3195445-3195464 Msa0485500:CDS 15.0%
!! TATTATACTACAAATATTCA+GGG - chr3_4:3195446-3195465 Msa0485500:CDS 15.0%
!!! GTTTTTTTTGTTTGAAATAT+TGG - chr3_4:3195622-3195641 Msa0485500:intron 15.0%
!!! ATATTTTAAAAACTGATTGT+TGG - chr3_4:3196769-3196788 Msa0485500:intron 15.0%
!! ATTTAAATAAAAGTAGAAAC+TGG + chr3_4:3197429-3197448 None:intergenic 15.0%
!! AAATAAAAAAGTCATTTGAA+TGG - chr3_4:3197534-3197553 Msa0485500:five_prime_UTR 15.0%
!!! GATTGTCTATGTTTTTTTTA+AGG - chr3_4:3193727-3193746 Msa0485500:intron 20.0%
!! AATCTTTACTCTAGATTAAA+AGG + chr3_4:3193916-3193935 None:intergenic 20.0%
!! AAAATGAAGTCCTAAAAAAA+AGG + chr3_4:3193998-3194017 None:intergenic 20.0%
!!! TACAATTACTGATTTTAGTT+AGG - chr3_4:3194044-3194063 Msa0485500:intron 20.0%
!! ATTTATTTCAACTGATATGA+GGG - chr3_4:3194793-3194812 Msa0485500:intron 20.0%
!! TTCCTATAATTTATCGTAAA+TGG - chr3_4:3195044-3195063 Msa0485500:intron 20.0%
!! TCCTATAATTTATCGTAAAT+GGG - chr3_4:3195045-3195064 Msa0485500:intron 20.0%
!!! ATACTGTTAAGGTATTTTAT+TGG - chr3_4:3196263-3196282 Msa0485500:intron 20.0%
!!! TACTGTTAAGGTATTTTATT+GGG - chr3_4:3196264-3196283 Msa0485500:intron 20.0%
!!! ATTGGGAAATTTATTTTGTT+TGG - chr3_4:3196281-3196300 Msa0485500:intron 20.0%
!!! ATATCAATTTTTTCGTTTTC+AGG - chr3_4:3196403-3196422 Msa0485500:intron 20.0%
!! AACATTAATTTCACTGAAAA+TGG + chr3_4:3196532-3196551 None:intergenic 20.0%
!!! CGGGAATTTTTTTTTTTTTT+AGG - chr3_4:3196576-3196595 Msa0485500:intron 20.0%
!! GATCAACTTCATTTAATTAA+AGG + chr3_4:3196857-3196876 None:intergenic 20.0%
!! TATATAAACTTTCAATCCAA+CGG - chr3_4:3196945-3196964 Msa0485500:intron 20.0%
!! TATATAAACTTTCAATCCAA+CGG - chr3_4:3196945-3196964 Msa0485500:intron 20.0%
!! AAGCACATAAATAAAAAGAA+AGG + chr3_4:3197181-3197200 None:intergenic 20.0%
!!! TATTGATTACTATTCGAAAA+AGG - chr3_4:3197267-3197286 Msa0485500:intron 20.0%
!! ATTGATTACTATTCGAAAAA+GGG - chr3_4:3197268-3197287 Msa0485500:intron 20.0%
!!! GTATTTTTATACTTTGCGTT+AGG + chr3_4:3193318-3193337 None:intergenic 25.0%
! TAAAAAAGAGAAAAGAGAAG+AGG + chr3_4:3193352-3193371 None:intergenic 25.0%
!!! GAATGTTGATGCATTTTTTA+GGG - chr3_4:3193677-3193696 Msa0485500:CDS 25.0%
! TTTAGTTAGATTTCAAACTC+CGG - chr3_4:3193938-3193957 Msa0485500:intron 25.0%
! ACTAAAGTGAATTGTTCAAA+CGG - chr3_4:3194078-3194097 Msa0485500:intron 25.0%
! ATAATGCATTATGAATGTGT+TGG - chr3_4:3194140-3194159 Msa0485500:intron 25.0%
!! TTGTATGATTTTGTGTCTTT+TGG - chr3_4:3194346-3194365 Msa0485500:intron 25.0%
! AACAGAGATTCATACTAATA+AGG + chr3_4:3194435-3194454 None:intergenic 25.0%
!!! ACAATAACAGTTTTGCTATT+TGG - chr3_4:3194523-3194542 Msa0485500:CDS 25.0%
!!! CAATAACAGTTTTGCTATTT+GGG - chr3_4:3194524-3194543 Msa0485500:CDS 25.0%
!! TGAAGTATTACTGTGAATAT+GGG + chr3_4:3194694-3194713 None:intergenic 25.0%
!! TTGAAGTATTACTGTGAATA+TGG + chr3_4:3194695-3194714 None:intergenic 25.0%
! AATACTTCAACCTTTCAATA+TGG - chr3_4:3194705-3194724 Msa0485500:intron 25.0%
! TGAAGCATACAAACAAAAAA+GGG + chr3_4:3194752-3194771 None:intergenic 25.0%
! ATGAAGCATACAAACAAAAA+AGG + chr3_4:3194753-3194772 None:intergenic 25.0%
! GATTTATTTCAACTGATATG+AGG - chr3_4:3194792-3194811 Msa0485500:intron 25.0%
! CTATGTGAAATAGAAAATAG+TGG + chr3_4:3194837-3194856 None:intergenic 25.0%
!! CTATTTTCTATTTCACATAG+CGG - chr3_4:3194837-3194856 Msa0485500:intron 25.0%
! TCCCATTTACGATAAATTAT+AGG + chr3_4:3195049-3195068 None:intergenic 25.0%
! CATCATTTAGATAACATTCA+TGG + chr3_4:3195137-3195156 None:intergenic 25.0%
! ATATTCTACTTGGAAGAATA+TGG + chr3_4:3195180-3195199 None:intergenic 25.0%
!! TGTTCAAGTTATATTCTACT+TGG + chr3_4:3195190-3195209 None:intergenic 25.0%
! ATCAAGCTGAAAAGAAAAAA+AGG + chr3_4:3195711-3195730 None:intergenic 25.0%
! AATGAACTGAAAGTTATAAC+TGG + chr3_4:3195938-3195957 None:intergenic 25.0%
!! CTTATCAGTTGATCATTTTA+GGG + chr3_4:3196055-3196074 None:intergenic 25.0%
!! ACTTATCAGTTGATCATTTT+AGG + chr3_4:3196056-3196075 None:intergenic 25.0%
! AAATGATCAACTGATAAGTA+TGG - chr3_4:3196057-3196076 Msa0485500:intron 25.0%
!!! GATAAGTATGGACTTTTTTA+CGG - chr3_4:3196069-3196088 Msa0485500:intron 25.0%
!!! GGAAATTTATTTTGTTTGGA+GGG - chr3_4:3196285-3196304 Msa0485500:intron 25.0%
! CTAAAGATAGCATTTAAATG+AGG + chr3_4:3196357-3196376 None:intergenic 25.0%
!! AATTTCACTGAAAATGGATT+GGG + chr3_4:3196526-3196545 None:intergenic 25.0%
! TAATTTCACTGAAAATGGAT+TGG + chr3_4:3196527-3196546 None:intergenic 25.0%
!!! TTTTTTTTAGGCATGTCAAT+TGG - chr3_4:3196588-3196607 Msa0485500:intron 25.0%
! AAAAAAAATACCCTGTGTTT+AGG - chr3_4:3196634-3196653 Msa0485500:intron 25.0%
! AAAAAAATACCCTGTGTTTA+GGG - chr3_4:3196635-3196654 Msa0485500:intron 25.0%
!! TAATTACGTGCAATTTTGAA+TGG - chr3_4:3196696-3196715 Msa0485500:intron 25.0%
!! AATTACGTGCAATTTTGAAT+GGG - chr3_4:3196697-3196716 Msa0485500:intron 25.0%
! TCAGATTACGTAAAAACTTA+CGG + chr3_4:3196823-3196842 None:intergenic 25.0%
!! GAATATAGACAAGAGTTTTA+GGG + chr3_4:3197055-3197074 None:intergenic 25.0%
!! AGAATATAGACAAGAGTTTT+AGG + chr3_4:3197056-3197075 None:intergenic 25.0%
! AATCAATTTCCAATCAAACT+GGG + chr3_4:3197099-3197118 None:intergenic 25.0%
! AAATCAATTTCCAATCAAAC+TGG + chr3_4:3197100-3197119 None:intergenic 25.0%
! TTAATTCTCTACTCATCATT+TGG - chr3_4:3197119-3197138 Msa0485500:intron 25.0%
!!! ATTTTCTTTGTAACTTGTCA+TGG - chr3_4:3197209-3197228 Msa0485500:intron 25.0%
!! AATCTTAGTTTGAGAAAAAC+TGG + chr3_4:3197494-3197513 None:intergenic 25.0%
!! GTTTTTCTCAAACTAAGATT+TGG - chr3_4:3197494-3197513 Msa0485500:CDS 25.0%
!!! CTTCAATTTTAGTATTACAC+AGG - chr3_4:3197720-3197739 Msa0485500:five_prime_UTR 25.0%
ACGAAGACATATATACTACT+TGG - chr3_4:3193245-3193264 Msa0485500:three_prime_UTR 30.0%
TTTATACTTTGCGTTAGGTT+GGG + chr3_4:3193313-3193332 None:intergenic 30.0%
! TTTTATACTTTGCGTTAGGT+TGG + chr3_4:3193314-3193333 None:intergenic 30.0%
!!! GGAATGTTGATGCATTTTTT+AGG - chr3_4:3193676-3193695 Msa0485500:CDS 30.0%
!!! TATTTTTTGTCTTATCCCTC+CGG - chr3_4:3193873-3193892 Msa0485500:intron 30.0%
!!! TGCTGTTTTGCCTTTTTTTT+AGG - chr3_4:3193985-3194004 Msa0485500:intron 30.0%
!!! GGACTTCATTTTTTGATAGA+TGG - chr3_4:3194006-3194025 Msa0485500:intron 30.0%
!!! CTGATTTTAGTTAGGAGTAA+TGG - chr3_4:3194052-3194071 Msa0485500:intron 30.0%
GTAAAAATTCCTTTGTCTGT+TGG - chr3_4:3194205-3194224 Msa0485500:intron 30.0%
! TTTTGTCTGTGTACTATTAG+TGG - chr3_4:3194284-3194303 Msa0485500:intron 30.0%
! GTATTGTGATTTTCATAGAG+AGG + chr3_4:3194505-3194524 None:intergenic 30.0%
CTATATCAGCTAGTAAAAAC+TGG + chr3_4:3194567-3194586 None:intergenic 30.0%
! GTTTTTACTAGCTGATATAG+CGG - chr3_4:3194567-3194586 Msa0485500:intron 30.0%
! AGTAGAAAAGGGAGAATTTT+TGG - chr3_4:3194594-3194613 Msa0485500:intron 30.0%
! GTTTTTCTATGGTAAACATG+CGG + chr3_4:3194649-3194668 None:intergenic 30.0%
! CTAACTCTTCAGTTTTTCTA+TGG + chr3_4:3194660-3194679 None:intergenic 30.0%
!!! TATTTCACATAGCGGATTTT+TGG - chr3_4:3194845-3194864 Msa0485500:intron 30.0%
! CATTTTACCGTAAAAAGGAA+GGG + chr3_4:3195094-3195113 None:intergenic 30.0%
AATATGGAGAATAACCTAAG+AGG + chr3_4:3195164-3195183 None:intergenic 30.0%
!! TAACTTGAACATTTTGATGC+AGG - chr3_4:3195199-3195218 Msa0485500:CDS 30.0%
TATTAAAGCGAAAGAAGCTA+TGG - chr3_4:3195339-3195358 Msa0485500:intron 30.0%
TGCTATTCTTCTACTAACTA+TGG - chr3_4:3195680-3195699 Msa0485500:CDS 30.0%
AGCTGAAAAGAAAAAAAGGA+AGG + chr3_4:3195707-3195726 None:intergenic 30.0%
AATCATACTTAGATCCAGTT+TGG + chr3_4:3196139-3196158 None:intergenic 30.0%
TGTGAATGTTGAATGAAATG+AGG - chr3_4:3196231-3196250 Msa0485500:intron 30.0%
GGTGCAAAAATATACTGTTA+AGG - chr3_4:3196252-3196271 Msa0485500:intron 30.0%
!!! GGGAAATTTATTTTGTTTGG+AGG - chr3_4:3196284-3196303 Msa0485500:intron 30.0%
TGTCAGTACTTTAGTTAAAG+TGG - chr3_4:3196328-3196347 Msa0485500:intron 30.0%
!!! TTTTTTCGTTTTCAGGTTAC+TGG - chr3_4:3196410-3196429 Msa0485500:intron 30.0%
CTTCAAATATACAGTAGCTT+CGG - chr3_4:3196556-3196575 Msa0485500:intron 30.0%
TTCAAATATACAGTAGCTTC+GGG - chr3_4:3196557-3196576 Msa0485500:intron 30.0%
!!! AACACAGGGTATTTTTTTTC+TGG + chr3_4:3196633-3196652 None:intergenic 30.0%
ATGTATTTACCCTAAACACA+GGG + chr3_4:3196647-3196666 None:intergenic 30.0%
TAGGGTAAATACATGTACTA+TGG - chr3_4:3196653-3196672 Msa0485500:intron 30.0%
AGGGTAAATACATGTACTAT+GGG - chr3_4:3196654-3196673 Msa0485500:intron 30.0%
AATACATGTACTATGGGTAT+TGG - chr3_4:3196660-3196679 Msa0485500:intron 30.0%
ATACATGTACTATGGGTATT+GGG - chr3_4:3196661-3196680 Msa0485500:intron 30.0%
CAAAATTGCACGTAATTACT+TGG + chr3_4:3196694-3196713 None:intergenic 30.0%
TAGTATAAGCAGATATGTGT+GGG + chr3_4:3196727-3196746 None:intergenic 30.0%
TTAGTATAAGCAGATATGTG+TGG + chr3_4:3196728-3196747 None:intergenic 30.0%
! TATTTTACACAATTGACCGT+TGG + chr3_4:3196964-3196983 None:intergenic 30.0%
GTGTGTGTAAAATTGAAACA+AGG + chr3_4:3197157-3197176 None:intergenic 30.0%
!!! GAACTGCTGCTTATTTTTTT+AGG - chr3_4:3197391-3197410 Msa0485500:intron 30.0%
ATTTGAAAACACCTGTGTAA+TGG + chr3_4:3197589-3197608 None:intergenic 30.0%
AAAGAGAAAAGAGAAGAGGA+GGG + chr3_4:3193348-3193367 None:intergenic 35.0%
AAAAGAGAAAAGAGAAGAGG+AGG + chr3_4:3193349-3193368 None:intergenic 35.0%
AATAAGACGTTTGTCAGGTT+TGG + chr3_4:3193550-3193569 None:intergenic 35.0%
CAAGCAACAAACAGTAAGTT+CGG + chr3_4:3193657-3193676 None:intergenic 35.0%
AACATAGACAATCGACAACA+TGG + chr3_4:3193720-3193739 None:intergenic 35.0%
GCATAAAAAATCGTTCGTTC+AGG + chr3_4:3193968-3193987 None:intergenic 35.0%
AGACAAAACTACAGTTAGCA+AGG + chr3_4:3194272-3194291 None:intergenic 35.0%
GCTAGTAAAAACTGGAATAG+CGG + chr3_4:3194559-3194578 None:intergenic 35.0%
TATAGCGGCAATAGTAGAAA+AGG - chr3_4:3194582-3194601 Msa0485500:intron 35.0%
ATAGCGGCAATAGTAGAAAA+GGG - chr3_4:3194583-3194602 Msa0485500:intron 35.0%
ACCTTTCAATATGGAAGCTA+TGG - chr3_4:3194714-3194733 Msa0485500:intron 35.0%
ACCATAGCTTCCATATTGAA+AGG + chr3_4:3194718-3194737 None:intergenic 35.0%
CATATCAGTGTAATCAACAG+CGG + chr3_4:3194892-3194911 None:intergenic 35.0%
TCTTGTGTTGTGACATAAAC+AGG + chr3_4:3194990-3195009 None:intergenic 35.0%
! GTATTCACCCTTCCTTTTTA+CGG - chr3_4:3195084-3195103 Msa0485500:intron 35.0%
! CCATTTTACCGTAAAAAGGA+AGG + chr3_4:3195095-3195114 None:intergenic 35.0%
! CCTTCCTTTTTACGGTAAAA+TGG - chr3_4:3195092-3195111 Msa0485500:intron 35.0%
! TCCTTTTTACGGTAAAATGG+TGG - chr3_4:3195095-3195114 Msa0485500:intron 35.0%
! ACCACCATTTTACCGTAAAA+AGG + chr3_4:3195099-3195118 None:intergenic 35.0%
ATTCATGGACAAAAGAGAAC+AGG + chr3_4:3195122-3195141 None:intergenic 35.0%
CTAAATGATGAGTTCCTCTT+AGG - chr3_4:3195147-3195166 Msa0485500:CDS 35.0%
CAGTACTCATCCTTAATGAT+TGG + chr3_4:3195256-3195275 None:intergenic 35.0%
TTTCGCTTTAATACCAAGAG+GGG + chr3_4:3195332-3195351 None:intergenic 35.0%
CTTTCGCTTTAATACCAAGA+GGG + chr3_4:3195333-3195352 None:intergenic 35.0%
TCTTTCGCTTTAATACCAAG+AGG + chr3_4:3195334-3195353 None:intergenic 35.0%
! TGGAAAAGGTAAGCTCTTTT+TGG - chr3_4:3195359-3195378 Msa0485500:intron 35.0%
! GAGTGAAACAATAAAAGCAC+AGG + chr3_4:3195397-3195416 None:intergenic 35.0%
!! AGAACTTGTTTCTGATGACT+TGG - chr3_4:3195469-3195488 Msa0485500:CDS 35.0%
ATGAAACCTTTCTGACATGA+CGG + chr3_4:3195527-3195546 None:intergenic 35.0%
CAGAAAGGTTTCATTCTTGA+TGG - chr3_4:3195533-3195552 Msa0485500:intron 35.0%
AGTAGTTCAGATGTCAAACA+AGG + chr3_4:3195596-3195615 None:intergenic 35.0%
! ACTGGCAATTAACATTTTGC+AGG + chr3_4:3195920-3195939 None:intergenic 35.0%
!! TCAGTTGATCATTTTAGGGA+GGG + chr3_4:3196051-3196070 None:intergenic 35.0%
!! ATCAGTTGATCATTTTAGGG+AGG + chr3_4:3196052-3196071 None:intergenic 35.0%
!!! AAGTATGGACTTTTTTACGG+TGG - chr3_4:3196072-3196091 Msa0485500:intron 35.0%
TACTTAGATCCAGTTTGGAT+AGG + chr3_4:3196134-3196153 None:intergenic 35.0%
!! TTATTTTGTTTGGAGGGAAC+TGG - chr3_4:3196291-3196310 Msa0485500:intron 35.0%
!! AAATGGATTGGGAATCATAC+CGG + chr3_4:3196515-3196534 None:intergenic 35.0%
TCAATTGGACCCAAATTCAT+TGG - chr3_4:3196603-3196622 Msa0485500:intron 35.0%
CAATTGGACCCAAATTCATT+GGG - chr3_4:3196604-3196623 Msa0485500:intron 35.0%
TCTGGATACCCAATGAATTT+GGG + chr3_4:3196615-3196634 None:intergenic 35.0%
TTCTGGATACCCAATGAATT+TGG + chr3_4:3196616-3196635 None:intergenic 35.0%
CATGTATTTACCCTAAACAC+AGG + chr3_4:3196648-3196667 None:intergenic 35.0%
AGTATAAGCAGATATGTGTG+GGG + chr3_4:3196726-3196745 None:intergenic 35.0%
ATCTTGATGCATCTCAATGA+CGG - chr3_4:3196874-3196893 Msa0485500:intron 35.0%
!!! ATAGACAAGAGTTTTAGGGA+TGG + chr3_4:3197051-3197070 None:intergenic 35.0%
TTGAAACAAGGCCAGAAATT+GGG + chr3_4:3197145-3197164 None:intergenic 35.0%
ATTGAAACAAGGCCAGAAAT+TGG + chr3_4:3197146-3197165 None:intergenic 35.0%
ATTATGTGCAATGAACATGC+AGG - chr3_4:3197243-3197262 Msa0485500:intron 35.0%
TGGTCAAGAGACAATTCATT+TGG + chr3_4:3197569-3197588 None:intergenic 35.0%
ATCTTGCACAAAAATGTAGC+AGG + chr3_4:3197639-3197658 None:intergenic 35.0%
!! TAGGTTGGGTTTTTCGGATT+CGG + chr3_4:3193299-3193318 None:intergenic 40.0%
!!! TTGCGTTAGGTTGGGTTTTT+CGG + chr3_4:3193305-3193324 None:intergenic 40.0%
AAGAGAAGAGGAGGGTAATT+TGG + chr3_4:3193340-3193359 None:intergenic 40.0%
TCAGACATGAGATCAACAGA+AGG + chr3_4:3193501-3193520 None:intergenic 40.0%
ACGAGAATAAGACGTTTGTC+AGG + chr3_4:3193555-3193574 None:intergenic 40.0%
! GACAAACGTCTTATTCTCGT+TGG - chr3_4:3193555-3193574 Msa0485500:three_prime_UTR 40.0%
AGTAAGTTCGGATCTGAACA+AGG + chr3_4:3193645-3193664 None:intergenic 40.0%
! CGAACTTACTGTTTGTTGCT+TGG - chr3_4:3193655-3193674 Msa0485500:CDS 40.0%
ATTAAAAGGTTACTTCCCCC+CGG + chr3_4:3193902-3193921 None:intergenic 40.0%
AATCGTTCGTTCAGGATAAC+CGG + chr3_4:3193960-3193979 None:intergenic 40.0%
AGCACAAAACCAACAGACAA+AGG + chr3_4:3194217-3194236 None:intergenic 40.0%
! CTATCACTATGTGCTGCTAT+TGG + chr3_4:3194460-3194479 None:intergenic 40.0%
CACATAGTGATAGAGCATAG+CGG - chr3_4:3194467-3194486 Msa0485500:intron 40.0%
ATAGTGGCACGAGAAAATAG+CGG + chr3_4:3194821-3194840 None:intergenic 40.0%
! CGCTGTTGATTACACTGATA+TGG - chr3_4:3194890-3194909 Msa0485500:intron 40.0%
ATCCTTAATGATTGGCGACT+GGG + chr3_4:3195248-3195267 None:intergenic 40.0%
AGCGAAAGAAGCTATGGAAA+AGG - chr3_4:3195345-3195364 Msa0485500:intron 40.0%
!! GTTTCTGATGACTTGGTTGT+TGG - chr3_4:3195476-3195495 Msa0485500:CDS 40.0%
AAGAAACCGTCATGTCAGAA+AGG - chr3_4:3195518-3195537 Msa0485500:intron 40.0%
! TGATGGTTTTCCAAGAACTG+TGG - chr3_4:3195550-3195569 Msa0485500:intron 40.0%
!! AATTGATGACGCAATCCTTG+AGG - chr3_4:3195781-3195800 Msa0485500:intron 40.0%
AGGAGCAAACTTTGTATGGT+AGG + chr3_4:3195849-3195868 None:intergenic 40.0%
TGTTCTTAAGTCAAGACTCG+AGG - chr3_4:3196469-3196488 Msa0485500:intron 40.0%
!!! AGAGTTTTAGGGATGGCAAT+GGG + chr3_4:3197044-3197063 None:intergenic 40.0%
!!! AAGAGTTTTAGGGATGGCAA+TGG + chr3_4:3197045-3197064 None:intergenic 40.0%
TTCCAATCAAACTGGGAAGA+TGG + chr3_4:3197092-3197111 None:intergenic 40.0%
TCATCATTTGGCCCAATTTC+TGG - chr3_4:3197131-3197150 Msa0485500:intron 40.0%
CATTTGCAGCGAAGTTGAAA+GGG + chr3_4:3197471-3197490 None:intergenic 40.0%
TTGTCTCTTGACCATTACAC+AGG - chr3_4:3197575-3197594 Msa0485500:five_prime_UTR 40.0%
!! TTGGGTTTTTCGGATTCGGA+TGG + chr3_4:3193295-3193314 None:intergenic 45.0%
! GGTAATGGCGAGTTCTAACT+TGG - chr3_4:3193467-3193486 Msa0485500:three_prime_UTR 45.0%
AAGACGTTTGTCAGGTTTGG+AGG + chr3_4:3193547-3193566 None:intergenic 45.0%
TTAAAAGGTTACTTCCCCCC+GGG + chr3_4:3193901-3193920 None:intergenic 45.0%
! TACCTTTTCCAGATCCAGGT+GGG + chr3_4:3195225-3195244 None:intergenic 45.0%
TACCCAGTCGCCAATCATTA+AGG - chr3_4:3195243-3195262 Msa0485500:CDS 45.0%
CATCCTTAATGATTGGCGAC+TGG + chr3_4:3195249-3195268 None:intergenic 45.0%
! TGAGTACTGCTTATGCCACT+TGG - chr3_4:3195267-3195286 Msa0485500:intron 45.0%
ACATATCACCAGTAGCCAAG+TGG + chr3_4:3195285-3195304 None:intergenic 45.0%
AAGGCAATACCTTCTGTGCT+TGG + chr3_4:3195577-3195596 None:intergenic 45.0%
TGATGAGATGCTGCAGAAAC+AGG - chr3_4:3195727-3195746 Msa0485500:CDS 45.0%
GATGAGATGCTGCAGAAACA+GGG - chr3_4:3195728-3195747 Msa0485500:CDS 45.0%
ATCCTTGAGGAGCGAATTAC+TGG - chr3_4:3195794-3195813 Msa0485500:intron 45.0%
TGGGAGGAGCAAACTTTGTA+TGG + chr3_4:3195853-3195872 None:intergenic 45.0%
! TACAAAGTTTGCTCCTCCCA+AGG - chr3_4:3195853-3195872 Msa0485500:intron 45.0%
TCATCAACCCCAGAAACCTT+GGG + chr3_4:3195872-3195891 None:intergenic 45.0%
ATCATCAACCCCAGAAACCT+TGG + chr3_4:3195873-3195892 None:intergenic 45.0%
!! GTTGATCATTTTAGGGAGGG+AGG + chr3_4:3196048-3196067 None:intergenic 45.0%
!! TGGATAGGCTTCTAGCTCAT+GGG + chr3_4:3196119-3196138 None:intergenic 45.0%
!! TTGGATAGGCTTCTAGCTCA+TGG + chr3_4:3196120-3196139 None:intergenic 45.0%
AGCTAGAAGCCTATCCAAAC+TGG - chr3_4:3196122-3196141 Msa0485500:intron 45.0%
!! TTTTGTTTGGAGGGAACTGG+TGG - chr3_4:3196294-3196313 Msa0485500:intron 45.0%
GTTTCACAGGCAAACTGAAC+CGG - chr3_4:3196493-3196512 Msa0485500:intron 45.0%
ATGGGTACACAATTGACCGT+TGG + chr3_4:3197026-3197045 None:intergenic 45.0%
!! CTTTGGGAGGTTTTTCAGCA+TGG + chr3_4:3197309-3197328 None:intergenic 45.0%
TGCTGAAAAACCTCCCAAAG+AGG - chr3_4:3197309-3197328 Msa0485500:intron 45.0%
ACCTCAGATGTCACCTCTTT+GGG + chr3_4:3197325-3197344 None:intergenic 45.0%
TGTCTCAATAGAGTTCCCCT+TGG - chr3_4:3197356-3197375 Msa0485500:intron 45.0%
GCATTTGCAGCGAAGTTGAA+AGG + chr3_4:3197472-3197491 None:intergenic 45.0%
!!! TTTTTTTATTTTTGTATAAT+AGG - chr3_4:3193761-3193780 Msa0485500:intron 5.0%
!!! TTTTTTATTTTTGTATAATA+GGG - chr3_4:3193762-3193781 Msa0485500:intron 5.0%
! GTACCTTTTCCAGATCCAGG+TGG + chr3_4:3195226-3195245 None:intergenic 50.0%
! TGGGTACCTTTTCCAGATCC+AGG + chr3_4:3195229-3195248 None:intergenic 50.0%
! TGCTTATGCCACTTGGCTAC+TGG - chr3_4:3195274-3195293 Msa0485500:intron 50.0%
GTAGCAGCTAAAACCCCTCT+TGG - chr3_4:3195316-3195335 Msa0485500:intron 50.0%
TGTGCTTGGACCACAGTTCT+TGG + chr3_4:3195563-3195582 None:intergenic 50.0%
AACTGTGGTCCAAGCACAGA+AGG - chr3_4:3195565-3195584 Msa0485500:intron 50.0%
GTCCAGTAATTCGCTCCTCA+AGG + chr3_4:3195799-3195818 None:intergenic 50.0%
TGTATGGTAGGTTCTGCCAC+TGG + chr3_4:3195837-3195856 None:intergenic 50.0%
TTTGCTCCTCCCAAGGTTTC+TGG - chr3_4:3195860-3195879 Msa0485500:intron 50.0%
TTGCTCCTCCCAAGGTTTCT+GGG - chr3_4:3195861-3195880 Msa0485500:intron 50.0%
CTAGCTCATGGGAACTTCAC+AGG + chr3_4:3196108-3196127 None:intergenic 50.0%
TCATCCTTGCGCTGGATAAG+AGG + chr3_4:3196440-3196459 None:intergenic 50.0%
CGCCATCTTCCCAGTTTGAT+TGG - chr3_4:3197087-3197106 Msa0485500:intron 50.0%
TCAGATGTCACCTCTTTGGG+AGG + chr3_4:3197322-3197341 None:intergenic 50.0%
TCCCAAAGAGGTGACATCTG+AGG - chr3_4:3197321-3197340 Msa0485500:intron 50.0%
GACCTCAGATGTCACCTCTT+TGG + chr3_4:3197326-3197345 None:intergenic 50.0%
CTGTCACAGCAGCACAGCAA+CGG - chr3_4:3193446-3193465 Msa0485500:three_prime_UTR 55.0%
CAGCAGCACAGCAACGGTAA+TGG - chr3_4:3193452-3193471 Msa0485500:three_prime_UTR 55.0%
TGTCTTATCCCTCCGGTTCC+CGG - chr3_4:3193880-3193899 Msa0485500:intron 55.0%
!! CATTTTGATGCAGGCCCACC+TGG - chr3_4:3195208-3195227 Msa0485500:CDS 55.0%
AGGAGCGAATTACTGGACGC+TGG - chr3_4:3195801-3195820 Msa0485500:intron 55.0%
GGTAGGTTCTGCCACTGGAT+GGG + chr3_4:3195832-3195851 None:intergenic 55.0%
TGGTAGGTTCTGCCACTGGA+TGG + chr3_4:3195833-3195852 None:intergenic 55.0%
TGCTCCTCCCAAGGTTTCTG+GGG - chr3_4:3195862-3195881 Msa0485500:intron 55.0%
TCAACCCCAGAAACCTTGGG+AGG + chr3_4:3195869-3195888 None:intergenic 55.0%
TGAGCCTCTTATCCAGCGCA+AGG - chr3_4:3196433-3196452 Msa0485500:intron 55.0%
! CAAGACTCGAGGCGTTTCAC+AGG - chr3_4:3196480-3196499 Msa0485500:intron 55.0%
TAGAGTTCCCCTTGGACCCT+CGG - chr3_4:3197364-3197383 Msa0485500:intron 55.0%
AAGCAGCAGTTCGATCCCGA+GGG + chr3_4:3197383-3197402 None:intergenic 55.0%
TAAGCAGCAGTTCGATCCCG+AGG + chr3_4:3197384-3197403 None:intergenic 55.0%
GTCTTATCCCTCCGGTTCCC+GGG - chr3_4:3193881-3193900 Msa0485500:intron 60.0%
TCTTATCCCTCCGGTTCCCG+GGG - chr3_4:3193882-3193901 Msa0485500:intron 60.0%
GGCCCACCTGGATCTGGAAA+AGG - chr3_4:3195220-3195239 Msa0485500:CDS 60.0%
CGCTGGATACACCCATCCAG+TGG - chr3_4:3195818-3195837 Msa0485500:intron 60.0%
CTGCAGTGTCATCCTTGCGC+TGG + chr3_4:3196448-3196467 None:intergenic 60.0%
AGAGTTCCCCTTGGACCCTC+GGG - chr3_4:3197365-3197384 Msa0485500:intron 60.0%
TTCGATCCCGAGGGTCCAAG+GGG + chr3_4:3197374-3197393 None:intergenic 60.0%
GTTCGATCCCGAGGGTCCAA+GGG + chr3_4:3197375-3197394 None:intergenic 60.0%
AGTTCGATCCCGAGGGTCCA+AGG + chr3_4:3197376-3197395 None:intergenic 60.0%
CTTATCCCTCCGGTTCCCGG+GGG - chr3_4:3193883-3193902 Msa0485500:intron 65.0%
TTATCCCTCCGGTTCCCGGG+GGG - chr3_4:3193884-3193903 Msa0485500:intron 65.0%
GGTTACTTCCCCCCGGGAAC+CGG + chr3_4:3193895-3193914 None:intergenic 65.0%
GATGCAGGCCCACCTGGATC+TGG - chr3_4:3195214-3195233 Msa0485500:CDS 65.0%
ACTTCCCCCCGGGAACCGGA+GGG + chr3_4:3193891-3193910 None:intergenic 70.0%
TACTTCCCCCCGGGAACCGG+AGG + chr3_4:3193892-3193911 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 3193241 3197751 3193241 ID=Msa0485500;Name=Msa0485500
chr3_4 mRNA 3193241 3197751 3193241 ID=Msa0485500-mRNA-1;Parent=Msa0485500;Name=Msa0485500-mRNA-1;_AED=0.06;_eAED=0.06;_QI=230|1|1|1|1|1|6|385|243
chr3_4 exon 3193241 3193727 3193241 ID=Msa0485500-mRNA-1:exon:1132;Parent=Msa0485500-mRNA-1
chr3_4 exon 3194478 3194567 3194478 ID=Msa0485500-mRNA-1:exon:1131;Parent=Msa0485500-mRNA-1
chr3_4 exon 3195100 3195267 3195100 ID=Msa0485500-mRNA-1:exon:1130;Parent=Msa0485500-mRNA-1
chr3_4 exon 3195406 3195525 3195406 ID=Msa0485500-mRNA-1:exon:1129;Parent=Msa0485500-mRNA-1
chr3_4 exon 3195626 3195771 3195626 ID=Msa0485500-mRNA-1:exon:1128;Parent=Msa0485500-mRNA-1
chr3_4 exon 3197416 3197751 3197416 ID=Msa0485500-mRNA-1:exon:1127;Parent=Msa0485500-mRNA-1
chr3_4 five_prime_UTR 3197522 3197751 3197522 ID=Msa0485500-mRNA-1:five_prime_utr;Parent=Msa0485500-mRNA-1
chr3_4 CDS 3197416 3197521 3197416 ID=Msa0485500-mRNA-1:cds;Parent=Msa0485500-mRNA-1
chr3_4 CDS 3195626 3195771 3195626 ID=Msa0485500-mRNA-1:cds;Parent=Msa0485500-mRNA-1
chr3_4 CDS 3195406 3195525 3195406 ID=Msa0485500-mRNA-1:cds;Parent=Msa0485500-mRNA-1
chr3_4 CDS 3195100 3195267 3195100 ID=Msa0485500-mRNA-1:cds;Parent=Msa0485500-mRNA-1
chr3_4 CDS 3194478 3194567 3194478 ID=Msa0485500-mRNA-1:cds;Parent=Msa0485500-mRNA-1
chr3_4 CDS 3193626 3193727 3193626 ID=Msa0485500-mRNA-1:cds;Parent=Msa0485500-mRNA-1
chr3_4 three_prime_UTR 3193241 3193625 3193241 ID=Msa0485500-mRNA-1:three_prime_utr;Parent=Msa0485500-mRNA-1
Gene Sequence

>Msa0485500

ATGGCGAGTTCTAACTTGGAAGATGTTCCTTCTGTTGATCTCATGTCTGAGTTACTTCGTCGTTTCAAATGTTCCTCCAAACCTGACAAACGTCTTATTCTCGTTGGCCCACCTGGATCTGGAAAAGGTACCCAGTCGCCAATCATTAAGGATGAGTACTGCTTATGCCACTTGGCTACTGGTGATATGTTGAGAGCAGCTGTAGCAGCTAAAACCCCTCTTGGTATTAAAGCGAAAGAAGCTATGGAAAAGGGAGAACTTGTTTCTGATGACTTGGTTGTTGGCATCATTGATGAAGCAATGAAGAAACCGTCATGTCAGAAAGGTTTCATTCTTGATGGTTTTCCAAGAACTGTGGTCCAAGCACAGAAGCTTGATGAGATGCTGCAGAAACAGGGTGCTAAAATTGACAAAGTGCTCAATTTTGCAATTGATGACGCAATCCTTGAGGAGCGAATTACTGGACGCTGGATACACCCATCCAGTGGCAGAACCTACCATACAAAGTTTGCTCCTCCCAAGGTTTCTGGGGTTGATGATGTTACTGGTGAGCCTCTTATCCAGCGCAAGGATGACACTGCAGCTGTTCTTAAGTCAAGACTCGAGGCGTTTCACAGGCAAACTGAACCGGTTATTGATTACTATTCGAAAAAGGGCATTGTTGCTAGTCTCCATGCTGAAAAACCTCCCAAAGAGGTGACATCTGAGGTCGAGAAAGTGCTGTCTCAATAG

Protein sequence

>Msa0485500

MASSNLEDVPSVDLMSELLRRFKCSSKPDKRLILVGPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGIKAKEAMEKGELVSDDLVVGIIDEAMKKPSCQKGFILDGFPRTVVQAQKLDEMLQKQGAKIDKVLNFAIDDAILEERITGRWIHPSSGRTYHTKFAPPKVSGVDDVTGEPLIQRKDDTAAVLKSRLEAFHRQTEPVIDYYSKKGIVASLHAEKPPKEVTSEVEKVLSQ*