Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0202720 | XP_024632402.1 | 83.681 | 815 | 44 | 5 | 1 | 768 | 1 | 773 | 0.0 | 1247 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0202720 | sp|Q8VZ67|Y4919_ARATH | 64.928 | 345 | 69 | 5 | 2 | 337 | 4 | 305 | 4.08e-150 | 457 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0202720 | A0A396J988 | 83.681 | 815 | 44 | 5 | 1 | 768 | 1 | 773 | 0.0 | 1247 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0036920 | Msa0202720 | 0.801171 | 1.021389e-48 | -8.615850e-47 |
| Msa0039330 | Msa0202720 | 0.831481 | 1.628640e-55 | -8.615850e-47 |
| Msa0050380 | Msa0202720 | 0.820679 | 6.037358e-53 | -8.615850e-47 |
| Msa0086590 | Msa0202720 | 0.804214 | 2.405585e-49 | -8.615850e-47 |
| Msa0188460 | Msa0202720 | 0.811848 | 5.701940e-51 | -8.615850e-47 |
| Msa0202720 | Msa0220740 | 0.820884 | 5.417384e-53 | -8.615850e-47 |
| Msa0202720 | Msa0249560 | 0.803780 | 2.960455e-49 | -8.615850e-47 |
| Msa0202720 | Msa0288100 | 0.813875 | 2.050936e-51 | -8.615850e-47 |
| Msa0202720 | Msa0345970 | 0.802096 | 6.596411e-49 | -8.615850e-47 |
| Msa0202720 | Msa0355220 | 0.808703 | 2.719278e-50 | -8.615850e-47 |
| Msa0202720 | Msa0376590 | 0.827635 | 1.402982e-54 | -8.615850e-47 |
| Msa0202720 | Msa0379640 | 0.807653 | 4.550668e-50 | -8.615850e-47 |
| Msa0202720 | Msa0402290 | 0.805771 | 1.136371e-49 | -8.615850e-47 |
| Msa0202720 | Msa0479340 | 0.810868 | 9.305973e-51 | -8.615850e-47 |
| Msa0202720 | Msa0516370 | 0.808806 | 2.584716e-50 | -8.615850e-47 |
| Msa0202720 | Msa0517110 | 0.802206 | 6.261795e-49 | -8.615850e-47 |
| Msa0202720 | Msa0536130 | 0.820672 | 6.059836e-53 | -8.615850e-47 |
| Msa0202720 | Msa0558690 | 0.803027 | 4.239776e-49 | -8.615850e-47 |
| Msa0202720 | Msa0585230 | 0.813321 | 2.715707e-51 | -8.615850e-47 |
| Msa0202720 | Msa0598780 | 0.804465 | 2.132779e-49 | -8.615850e-47 |
| Msa0202720 | Msa0607540 | 0.800748 | 1.246239e-48 | -8.615850e-47 |
| Msa0202720 | Msa0647830 | 0.802002 | 6.898750e-49 | -8.615850e-47 |
| Msa0202720 | Msa0672690 | 0.818939 | 1.508902e-52 | -8.615850e-47 |
| Msa0202720 | Msa0690440 | 0.807855 | 4.122970e-50 | -8.615850e-47 |
| Msa0202720 | Msa0698930 | 0.818993 | 1.466772e-52 | -8.615850e-47 |
| Msa0202720 | Msa0766630 | 0.829997 | 3.762388e-55 | -8.615850e-47 |
| Msa0202720 | Msa0787470 | 0.802736 | 4.869742e-49 | -8.615850e-47 |
| Msa0202720 | Msa0802830 | 0.837136 | 6.209612e-57 | -8.615850e-47 |
| Msa0202720 | Msa0807030 | 0.821959 | 3.060054e-53 | -8.615850e-47 |
| Msa0202720 | Msa0842620 | 0.819780 | 9.702884e-53 | -8.615850e-47 |
| Msa0202720 | Msa0885280 | 0.810104 | 1.360582e-50 | -8.615850e-47 |
| Msa0202720 | Msa0907070 | 0.814683 | 1.359536e-51 | -8.615850e-47 |
| Msa0202720 | Msa0907260 | 0.800585 | 1.345449e-48 | -8.615850e-47 |
| Msa0202720 | Msa0912310 | 0.807559 | 4.763499e-50 | -8.615850e-47 |
| Msa0202720 | Msa0919850 | 0.810876 | 9.269182e-51 | -8.615850e-47 |
| Msa0202720 | Msa0925810 | 0.822154 | 2.756542e-53 | -8.615850e-47 |
| Msa0202720 | Msa0925870 | 0.822705 | 2.052844e-53 | -8.615850e-47 |
| Msa0202720 | Msa0931520 | 0.807746 | 4.347846e-50 | -8.615850e-47 |
| Msa0202720 | Msa0935910 | 0.807148 | 5.822558e-50 | -8.615850e-47 |
| Msa0202720 | Msa0942200 | 0.800331 | 1.515354e-48 | -8.615850e-47 |
| Msa0202720 | Msa0967180 | 0.818194 | 2.225653e-52 | -8.615850e-47 |
| Msa0202720 | Msa0992280 | 0.812433 | 4.249686e-51 | -8.615850e-47 |
| Msa0202720 | Msa1014540 | 0.807527 | 4.839111e-50 | -8.615850e-47 |
| Msa0202720 | Msa1045200 | 0.827953 | 1.176948e-54 | -8.615850e-47 |
| Msa0202720 | Msa1075220 | -0.811202 | 7.878286e-51 | -8.615850e-47 |
| Msa0202720 | Msa1075650 | 0.812956 | 3.266094e-51 | -8.615850e-47 |
| Msa0202720 | Msa1090260 | 0.801146 | 1.033457e-48 | -8.615850e-47 |
| Msa0202720 | Msa1121490 | 0.801069 | 1.071523e-48 | -8.615850e-47 |
| Msa0202720 | Msa1139000 | -0.811850 | 5.696509e-51 | -8.615850e-47 |
| Msa0202720 | Msa1158310 | 0.812438 | 4.238910e-51 | -8.615850e-47 |
| Msa0202720 | Msa1162550 | -0.833710 | 4.560381e-56 | -8.615850e-47 |
| Msa0202720 | Msa1171910 | 0.803910 | 2.781658e-49 | -8.615850e-47 |
| Msa0202720 | Msa1192990 | 0.814545 | 1.459212e-51 | -8.615850e-47 |
| Msa0202720 | Msa1205130 | 0.814641 | 1.389328e-51 | -8.615850e-47 |
| Msa0202720 | Msa1233890 | 0.812239 | 4.686700e-51 | -8.615850e-47 |
| Msa0202720 | Msa1234970 | 0.812333 | 4.468367e-51 | -8.615850e-47 |
| Msa0202720 | Msa1247030 | 0.801771 | 7.694838e-49 | -8.615850e-47 |
| Msa0202720 | Msa1249490 | 0.820879 | 5.430992e-53 | -8.615850e-47 |
| Msa0202720 | Msa1269940 | 0.806322 | 8.703479e-50 | -8.615850e-47 |
| Msa0202720 | Msa1284680 | 0.811990 | 5.309452e-51 | -8.615850e-47 |
| Msa0202720 | Msa1362880 | 0.803194 | 3.915507e-49 | -8.615850e-47 |
| Msa0202720 | Msa1390050 | 0.828343 | 9.478951e-55 | -8.615850e-47 |
| Msa0202720 | Msa1393410 | 0.806091 | 9.733577e-50 | -8.615850e-47 |
| Msa0202720 | Msa1397860 | 0.808351 | 3.231931e-50 | -8.615850e-47 |
| Msa0202720 | Msa1411020 | 0.810992 | 8.747577e-51 | -8.615850e-47 |
| Msa0202720 | Msa1424290 | 0.804512 | 2.085240e-49 | -8.615850e-47 |
| Msa0202720 | Msa1434350 | 0.804859 | 1.764906e-49 | -8.615850e-47 |
| Msa0202720 | Msa1435420 | 0.806597 | 7.615534e-50 | -8.615850e-47 |
| Msa0202720 | Msa1439320 | 0.808929 | 2.431852e-50 | -8.615850e-47 |
| Msa0202720 | Msa1440810 | 0.803179 | 3.944385e-49 | -8.615850e-47 |
| Msa0202720 | Msa1451620 | -0.833480 | 5.206582e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0202720 | MtrunA17_Chr2g0299951 | 83.681 | 815 | 44 | 5 | 1 | 768 | 1 | 773 | 0.0 | 1247 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0202720 | AT4G19190.1 | 64.928 | 345 | 69 | 5 | 2 | 337 | 4 | 305 | 4.15e-151 | 457 |
Find 156 sgRNAs with CRISPR-Local
Find 374 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTGCAGCCTTGGCACTTTC+AGG | 0.122328 | 2_1:+25287887 | None:intergenic |
| TTGTGCTGAAAATTGATTTA+TGG | 0.151168 | 2_1:-25288508 | Msa0202720:five_prime_UTR |
| CACTGTTCCGAATTCTTCTT+TGG | 0.160478 | 2_1:-25288868 | Msa0202720:five_prime_UTR |
| TCTTATTCTTCCGATGATTC+TGG | 0.243873 | 2_1:-25284044 | Msa0202720:CDS |
| GAGGACATATTTGATGAATA+TGG | 0.278045 | 2_1:-25285488 | Msa0202720:CDS |
| GAATGATGCAGCCTCTAAAA+TGG | 0.280207 | 2_1:-25285595 | Msa0202720:intron |
| AATTCTGATGAGAAGGATTC+TGG | 0.293008 | 2_1:-25284824 | Msa0202720:CDS |
| GATAAGTTGGTCAATAAATC+AGG | 0.296084 | 2_1:+25285337 | None:intergenic |
| TAATTTCCATTGTAACAATC+AGG | 0.316341 | 2_1:+25284962 | None:intergenic |
| TTCAATCTACTTTCCTCGTT+TGG | 0.316730 | 2_1:+25286967 | None:intergenic |
| GCTGCAAGGGCAAAACCTTT+TGG | 0.331961 | 2_1:-25287081 | Msa0202720:CDS |
| CTCATTCAGTTCTGCAGCCT+TGG | 0.332250 | 2_1:+25287877 | None:intergenic |
| TCGGCAACTATCTGCTGGTT+GGG | 0.335204 | 2_1:+25285515 | None:intergenic |
| TGTGCTGAAAATTGATTTAT+GGG | 0.340602 | 2_1:-25288507 | Msa0202720:five_prime_UTR |
| TTCAAACACGATTCAATTCA+AGG | 0.341898 | 2_1:-25288799 | Msa0202720:intron |
| ATTTCAATTGAAGGTTGTTT+TGG | 0.352267 | 2_1:-25288471 | Msa0202720:five_prime_UTR |
| ACAATGGAAATTATAAGAAT+AGG | 0.360597 | 2_1:-25284952 | Msa0202720:CDS |
| GAGAAGATGGAGGGTGAGGA+AGG | 0.369802 | 2_1:-25288409 | Msa0202720:exon |
| AGCTACGATGATTGATAGAT+AGG | 0.371166 | 2_1:+25288897 | None:intergenic |
| CCACGAGGAGGACTGATTCC+TGG | 0.379260 | 2_1:+25285557 | None:intergenic |
| ATCTGCTGGTTGGGGTCGTC+TGG | 0.382938 | 2_1:+25285524 | None:intergenic |
| GCACGGCCGAAAACATCTTT+TGG | 0.385357 | 2_1:+25287644 | None:intergenic |
| ATCCACTTACGGCGTTGATT+AGG | 0.390730 | 2_1:+25288259 | None:intergenic |
| CAATGGAAATTATAAGAATA+GGG | 0.391961 | 2_1:-25284951 | Msa0202720:CDS |
| AGTTGATTATAAGACGAAAT+CGG | 0.399847 | 2_1:-25288338 | Msa0202720:CDS |
| CAAGAGATTCAATGATGATA+AGG | 0.402994 | 2_1:-25288371 | Msa0202720:CDS |
| CTGAAGATCCTGACATTGAC+AGG | 0.415417 | 2_1:-25284910 | Msa0202720:CDS |
| CTCGGCAACTATCTGCTGGT+TGG | 0.432357 | 2_1:+25285514 | None:intergenic |
| TTTATGTATGTTCGTCCTCC+TGG | 0.432783 | 2_1:-25287917 | Msa0202720:CDS |
| AACCTGTTTGCTACACTTCA+CGG | 0.434272 | 2_1:+25286154 | None:intergenic |
| CGATGATTCTGGCGTTGAAA+AGG | 0.436813 | 2_1:-25284033 | Msa0202720:CDS |
| GGGGTATTTGTTTGAAATTG+TGG | 0.440243 | 2_1:-25288442 | Msa0202720:five_prime_UTR |
| GAAGGAGAAGATGGAGGGTG+AGG | 0.440368 | 2_1:-25288413 | Msa0202720:exon |
| TATAAAGAGTCAAGTTCATC+AGG | 0.440439 | 2_1:-25285178 | Msa0202720:CDS |
| TGTTTAAGATGTGGGAACTA+TGG | 0.443971 | 2_1:-25287036 | Msa0202720:CDS |
| CAATCGCCCAAAGAAGAATT+CGG | 0.449732 | 2_1:+25288861 | None:intergenic |
| AAACATCACGGTATGCTTGA+TGG | 0.453262 | 2_1:-25283891 | Msa0202720:CDS |
| CGATGATTCTGACGTTGAAA+AGG | 0.454352 | 2_1:-25284312 | Msa0202720:CDS |
| CGATCATCCCTGTCAATGTC+AGG | 0.455262 | 2_1:+25284902 | None:intergenic |
| TTGCGAATTTCGACTCCAAA+AGG | 0.461585 | 2_1:+25287066 | None:intergenic |
| ACCCGTGAAGTGTAGCAAAC+AGG | 0.461917 | 2_1:-25286156 | Msa0202720:intron |
| AGAAGGATCAAAGAAGAAAG+TGG | 0.464496 | 2_1:-25284557 | Msa0202720:CDS |
| ACTGTTCCGAATTCTTCTTT+GGG | 0.467204 | 2_1:-25288867 | Msa0202720:five_prime_UTR |
| TGAAGCATGAGTCTCTAAAC+TGG | 0.469166 | 2_1:+25286202 | None:intergenic |
| AATGAAGAGGAAGGTCCATC+AGG | 0.469293 | 2_1:+25287806 | None:intergenic |
| GCCAGACTCCTCAGATGAAA+AGG | 0.470106 | 2_1:+25284985 | None:intergenic |
| GCAGATAGTTGCCGAGGAAG+AGG | 0.472515 | 2_1:-25285507 | Msa0202720:CDS |
| TGGCATTATAGCATCCTTCA+AGG | 0.475418 | 2_1:+25286987 | None:intergenic |
| CGATGATTCTGATGTTGAAA+AGG | 0.478243 | 2_1:-25283940 | Msa0202720:CDS |
| AAAAGAATGATCGAAGTAGA+AGG | 0.483404 | 2_1:-25284388 | Msa0202720:CDS |
| AAAAGAATGATCAAAGTAGA+AGG | 0.486744 | 2_1:-25284574 | Msa0202720:CDS |
| ATCCTAATCAACGCCGTAAG+TGG | 0.487648 | 2_1:-25288261 | Msa0202720:CDS |
| TAAAGAATGATCGAAGTAGA+AGG | 0.493035 | 2_1:-25284481 | Msa0202720:CDS |
| TGGTGTGGAGAAGGAGAAGA+TGG | 0.493460 | 2_1:-25288422 | Msa0202720:exon |
| ATGTTAAATGTTTAAGATGT+GGG | 0.494765 | 2_1:-25287044 | Msa0202720:CDS |
| GGCACAAAGATCCAGAATCC+AGG | 0.494805 | 2_1:+25286223 | None:intergenic |
| ATCAAATATGTCCTCTTCCT+CGG | 0.494911 | 2_1:+25285496 | None:intergenic |
| TTCAATGATGATAAGGGTGG+AGG | 0.495258 | 2_1:-25288364 | Msa0202720:CDS |
| AAAAGGATGGTCGAAGTAGA+AGG | 0.495723 | 2_1:-25283923 | Msa0202720:CDS |
| CTTCCTCGGCAACTATCTGC+TGG | 0.498177 | 2_1:+25285510 | None:intergenic |
| GTTGATTATAAGACGAAATC+GGG | 0.498199 | 2_1:-25288337 | Msa0202720:CDS |
| GACATTCACGATCACCACTT+TGG | 0.498344 | 2_1:+25287010 | None:intergenic |
| GTAGAGGAAGAAGAAGAAGA+AGG | 0.501063 | 2_1:-25288839 | Msa0202720:five_prime_UTR |
| ACCTGTTTGCTACACTTCAC+GGG | 0.503116 | 2_1:+25286155 | None:intergenic |
| AATGATGCAGCCTCTAAAAT+GGG | 0.503249 | 2_1:-25285594 | Msa0202720:intron |
| AAGAGATTCAATGATGATAA+GGG | 0.504844 | 2_1:-25288370 | Msa0202720:CDS |
| CTCGAAGAAGGACAAGGAAA+AGG | 0.506072 | 2_1:-25288056 | Msa0202720:intron |
| ACGTGAACGCCGAACTGAAG+AGG | 0.508340 | 2_1:-25288215 | Msa0202720:CDS |
| AAAAGGATAGTCGAAGTAGA+AGG | 0.510020 | 2_1:-25284016 | Msa0202720:CDS |
| AAAAGGATAGTCGAAGTAGA+AGG | 0.510020 | 2_1:-25284295 | Msa0202720:CDS |
| ACTTCAAATTCTTCTTCAGT+TGG | 0.510634 | 2_1:+25287617 | None:intergenic |
| CGATTATCATTTAAAACAGA+AGG | 0.511657 | 2_1:-25284795 | Msa0202720:CDS |
| AGGGAAGCATCTTTAGATGA+TGG | 0.512224 | 2_1:-25285253 | Msa0202720:CDS |
| AAGAAAGTGGAAGTCAAAAG+AGG | 0.512405 | 2_1:-25284544 | Msa0202720:CDS |
| AATTTCCATTGTAACAATCA+GGG | 0.514193 | 2_1:+25284963 | None:intergenic |
| AATGTTAAATGTTTAAGATG+TGG | 0.517853 | 2_1:-25287045 | Msa0202720:CDS |
| TTGAAATTGTGGTGTGGAGA+AGG | 0.522548 | 2_1:-25288431 | Msa0202720:five_prime_UTR |
| TTTGTTCAGCAATCCACTTA+CGG | 0.522830 | 2_1:+25288248 | None:intergenic |
| CGGCAACTATCTGCTGGTTG+GGG | 0.524402 | 2_1:+25285516 | None:intergenic |
| CAGTAAGATCTGTGTGGGCA+AGG | 0.525433 | 2_1:+25286920 | None:intergenic |
| AAGATGGAGGGTGAGGAAGG+AGG | 0.525732 | 2_1:-25288406 | Msa0202720:CDS |
| TGGGAGCTCAAGCAGAAGCC+AGG | 0.528137 | 2_1:-25285575 | Msa0202720:CDS |
| GACATCTCTCATCTCGAAGA+AGG | 0.529626 | 2_1:-25288068 | Msa0202720:CDS |
| AGAGGAAGGTCCATCAGGAT+TGG | 0.531357 | 2_1:+25287811 | None:intergenic |
| AGAATATTCAAAAGCACAAG+AGG | 0.534158 | 2_1:-25284871 | Msa0202720:CDS |
| ACCGTGGAAGTCAGAAGAGC+AGG | 0.535587 | 2_1:-25284634 | Msa0202720:CDS |
| GCAGCTATTGCATTCAGAAA+GGG | 0.542681 | 2_1:-25285272 | Msa0202720:CDS |
| CTTCTTCAGTTGGTAGAGCA+CGG | 0.543996 | 2_1:+25287627 | None:intergenic |
| CCATCAGGATTGGTTTGTGT+AGG | 0.546610 | 2_1:+25287821 | None:intergenic |
| AGCAGCTATTGCATTCAGAA+AGG | 0.547301 | 2_1:-25285273 | Msa0202720:CDS |
| AACTGAAGAGGTTGCTCGTG+AGG | 0.548115 | 2_1:-25288203 | Msa0202720:intron |
| AAAAGAATGATCGAAGAAGA+AGG | 0.548205 | 2_1:-25284109 | Msa0202720:CDS |
| TCAATGATGATAAGGGTGGA+GGG | 0.549423 | 2_1:-25288363 | Msa0202720:CDS |
| TGATCGTGAATGTCCCTTGA+AGG | 0.550696 | 2_1:-25287001 | Msa0202720:CDS |
| CACGAGCAACCTCTTCAGTT+CGG | 0.553183 | 2_1:+25288206 | None:intergenic |
| ACATTATAATTCTGATGAGA+AGG | 0.553822 | 2_1:-25284831 | Msa0202720:CDS |
| CAATCTACTGCGATTCTCAA+AGG | 0.553970 | 2_1:-25284685 | Msa0202720:CDS |
| TGAAACAGGAGTTGCTGCAA+GGG | 0.555136 | 2_1:-25287094 | Msa0202720:CDS |
| CAATGATGATAAGGGTGGAG+GGG | 0.555405 | 2_1:-25288362 | Msa0202720:CDS |
| AAAGAGCAGAAACAAGCAAT+CGG | 0.556601 | 2_1:-25285128 | Msa0202720:CDS |
| CTTTACAACATCAGAATCAT+CGG | 0.558417 | 2_1:+25284499 | None:intergenic |
| GAGGAGGAAGTACAATGAAG+AGG | 0.563248 | 2_1:+25287793 | None:intergenic |
| TGTGGAGAAGGAGAAGATGG+AGG | 0.566341 | 2_1:-25288419 | Msa0202720:exon |
| GAATCAGTCCTCCTCGTGGA+GGG | 0.567419 | 2_1:-25285553 | Msa0202720:CDS |
| GGCATTATAGCATCCTTCAA+GGG | 0.567454 | 2_1:+25286988 | None:intergenic |
| TCTGGCCCTGATTGTTACAA+TGG | 0.571744 | 2_1:-25284968 | Msa0202720:CDS |
| ATTTGTTTGAAATTGTGGTG+TGG | 0.573043 | 2_1:-25288437 | Msa0202720:five_prime_UTR |
| GAAATTATAAGAATAGGGAT+AGG | 0.573134 | 2_1:-25284946 | Msa0202720:CDS |
| CAAGGCTGCAGAACTGAATG+AGG | 0.575016 | 2_1:-25287876 | Msa0202720:CDS |
| CCAGGGAAAATCTCCCTCCC+CGG | 0.578927 | 2_1:+25286241 | None:intergenic |
| GGATAAGACAAAGGATGCCA+TGG | 0.579111 | 2_1:+25288280 | None:intergenic |
| TGGGCAAGGATAGCATTCAA+AGG | 0.585876 | 2_1:+25286934 | None:intergenic |
| GCACTTTCAGGATTGTAACC+AGG | 0.587097 | 2_1:+25287899 | None:intergenic |
| GTGGAGAAGGAGAAGATGGA+GGG | 0.594975 | 2_1:-25288418 | Msa0202720:exon |
| TGTTTACTCCTACCGTGCAT+AGG | 0.596727 | 2_1:+25285025 | None:intergenic |
| CAAAAGCACAAGAGGACACA+TGG | 0.598554 | 2_1:-25284863 | Msa0202720:CDS |
| TCATGCTTCAAGAAAGAGTG+TGG | 0.598813 | 2_1:-25286189 | Msa0202720:CDS |
| GCACAAAGATCCAGAATCCA+GGG | 0.599757 | 2_1:+25286224 | None:intergenic |
| ATAAGTTGGTCAATAAATCA+GGG | 0.599830 | 2_1:+25285338 | None:intergenic |
| ATGAAACAGGAGTTGCTGCA+AGG | 0.600562 | 2_1:-25287095 | Msa0202720:CDS |
| GGAATCAGTCCTCCTCGTGG+AGG | 0.602508 | 2_1:-25285554 | Msa0202720:CDS |
| GGGCAAGGATAGCATTCAAA+GGG | 0.602594 | 2_1:+25286935 | None:intergenic |
| AGGAAGTACAATGAAGAGGA+AGG | 0.603174 | 2_1:+25287797 | None:intergenic |
| TCTTCTTTGGGCGATTGTAG+AGG | 0.604312 | 2_1:-25288855 | Msa0202720:five_prime_UTR |
| GATTATCATTTAAAACAGAA+GGG | 0.604720 | 2_1:-25284794 | Msa0202720:CDS |
| ACCTGCTCTTCTGACTTCCA+CGG | 0.605075 | 2_1:+25284633 | None:intergenic |
| CCTACACAAACCAATCCTGA+TGG | 0.608975 | 2_1:-25287821 | Msa0202720:CDS |
| GGAGTAAACATGGCAAGCGA+AGG | 0.610291 | 2_1:-25285012 | Msa0202720:CDS |
| TCTCATCTCGAAGAAGGACA+AGG | 0.612012 | 2_1:-25288062 | Msa0202720:CDS |
| ATCGGAAGAATAAGAACACT+CGG | 0.612070 | 2_1:+25283959 | None:intergenic |
| GACATATTTGATGAATATGG+AGG | 0.615915 | 2_1:-25285485 | Msa0202720:intron |
| AGGGTGAGGAAGGAGGTGTG+AGG | 0.616162 | 2_1:-25288399 | Msa0202720:CDS |
| TTAATTCCTAGGCCACCCCA+TGG | 0.620465 | 2_1:-25287686 | Msa0202720:intron |
| ATGATCATCCTATGCACGGT+AGG | 0.621149 | 2_1:-25285033 | Msa0202720:CDS |
| TTTAGTCATGATCGGTACCG+TGG | 0.624391 | 2_1:-25284650 | Msa0202720:CDS |
| GACCTCAGTAAGATCTGTGT+GGG | 0.627972 | 2_1:+25286915 | None:intergenic |
| GATTATGATCATCCTATGCA+CGG | 0.629111 | 2_1:-25285037 | Msa0202720:CDS |
| AGACGAAATCGGGTACTGCG+TGG | 0.632015 | 2_1:-25288327 | Msa0202720:CDS |
| GATTCTGATGTTGAAAAGGA+TGG | 0.636313 | 2_1:-25283936 | Msa0202720:CDS |
| TTACAATCCTGAAAGTGCCA+AGG | 0.645905 | 2_1:-25287894 | Msa0202720:CDS |
| AGATTCAATGATGATAAGGG+TGG | 0.655372 | 2_1:-25288367 | Msa0202720:CDS |
| ATGCACGGTAGGAGTAAACA+TGG | 0.659132 | 2_1:-25285022 | Msa0202720:CDS |
| CAACCAGCAGATAGTTGCCG+AGG | 0.664296 | 2_1:-25285513 | Msa0202720:CDS |
| CCAGGAATCAGTCCTCCTCG+TGG | 0.665856 | 2_1:-25285557 | Msa0202720:CDS |
| TGACCTCAGTAAGATCTGTG+TGG | 0.672359 | 2_1:+25286914 | None:intergenic |
| GGTTTAAACCCTCCACGAGG+AGG | 0.673100 | 2_1:+25285545 | None:intergenic |
| TAATCATCAACGTCAACCCG+AGG | 0.674351 | 2_1:-25284738 | Msa0202720:CDS |
| GACATTGACAGGGATGATCG+AGG | 0.688137 | 2_1:-25284899 | Msa0202720:CDS |
| GGATGCTATAATGCCAAACG+AGG | 0.689339 | 2_1:-25286980 | Msa0202720:CDS |
| TGAAGATCCTGACATTGACA+GGG | 0.700971 | 2_1:-25284909 | Msa0202720:CDS |
| CTTTCAGGATTGTAACCAGG+AGG | 0.708694 | 2_1:+25287902 | None:intergenic |
| AGATTGTTGATGAATACTTG+TGG | 0.712769 | 2_1:+25284702 | None:intergenic |
| GGGAACTATGGTCACCAAAG+TGG | 0.723725 | 2_1:-25287024 | Msa0202720:CDS |
| CGTTGATTAGGATAAGACAA+AGG | 0.725839 | 2_1:+25288271 | None:intergenic |
| TGCCCACACAGATCTTACTG+AGG | 0.747455 | 2_1:-25286917 | Msa0202720:intron |
| TCTGGTTTAAACCCTCCACG+AGG | 0.791505 | 2_1:+25285542 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTTTTTTTTATTGTTTG+TGG | - | chr2_1:25285925-25285944 | Msa0202720:intron | 10.0% |
| !!! | TTACCTTTTATTATTGATTT+TGG | - | chr2_1:25285466-25285485 | Msa0202720:intron | 15.0% |
| !!! | TACCTTTTATTATTGATTTT+GGG | - | chr2_1:25285467-25285486 | Msa0202720:intron | 15.0% |
| !!! | TTAGTAACTGAATATTTTTT+AGG | - | chr2_1:25285589-25285608 | Msa0202720:intron | 15.0% |
| !!! | CATTTTTCTTATTTGTTGTT+TGG | + | chr2_1:25283775-25283794 | None:intergenic | 20.0% |
| !!! | CATTATTTTCTCAACATAAA+CGG | - | chr2_1:25284028-25284047 | Msa0202720:CDS | 20.0% |
| !! | ACAAATCAAAATAAAAGGTT+GGG | + | chr2_1:25284691-25284710 | None:intergenic | 20.0% |
| !! | AACAAATCAAAATAAAAGGT+TGG | + | chr2_1:25284692-25284711 | None:intergenic | 20.0% |
| !!! | AATCGAATTTTTCATGTTTT+TGG | - | chr2_1:25284729-25284748 | Msa0202720:CDS | 20.0% |
| !! | ATAAAAGGTAAAAAAATCTG+TGG | + | chr2_1:25285457-25285476 | None:intergenic | 20.0% |
| !! | TTCCCAAAATCAATAATAAA+AGG | + | chr2_1:25285472-25285491 | None:intergenic | 20.0% |
| !!! | AATGTTAAATGTTTAAGATG+TGG | - | chr2_1:25285663-25285682 | Msa0202720:intron | 20.0% |
| !!! | ATGTTAAATGTTTAAGATGT+GGG | - | chr2_1:25285664-25285683 | Msa0202720:intron | 20.0% |
| !! | TATAAAGGATAAAAAATGCA+AGG | + | chr2_1:25286354-25286373 | None:intergenic | 20.0% |
| !! | ATATCGATAAATAGAATAGA+AGG | - | chr2_1:25286741-25286760 | Msa0202720:intron | 20.0% |
| !!! | TTTTGGTTTTTTAGATAAGT+TGG | + | chr2_1:25287387-25287406 | None:intergenic | 20.0% |
| !! | ATCTAAGAAAAAAAGAGTTA+AGG | - | chr2_1:25287487-25287506 | Msa0202720:intron | 20.0% |
| !! | ACAATGGAAATTATAAGAAT+AGG | - | chr2_1:25287756-25287775 | Msa0202720:intron | 20.0% |
| !! | CAATGGAAATTATAAGAATA+GGG | - | chr2_1:25287757-25287776 | Msa0202720:intron | 20.0% |
| !!! | CTTCTGTTTTAAATGATAAT+CGG | + | chr2_1:25287915-25287934 | None:intergenic | 20.0% |
| !!! | GATTATCATTTAAAACAGAA+GGG | - | chr2_1:25287914-25287933 | Msa0202720:CDS | 20.0% |
| !! | AGAAGGATAAAAGAAAAATA+TGG | - | chr2_1:25288337-25288356 | Msa0202720:CDS | 20.0% |
| ! | ATGTTGAGAAAATAATGAGT+GGG | + | chr2_1:25284025-25284044 | None:intergenic | 25.0% |
| ! | TATGTTGAGAAAATAATGAG+TGG | + | chr2_1:25284026-25284045 | None:intergenic | 25.0% |
| !! | CAATTTTTACAAAATCACAC+TGG | + | chr2_1:25284175-25284194 | None:intergenic | 25.0% |
| !! | TTGTGCTGAAAATTGATTTA+TGG | - | chr2_1:25284200-25284219 | Msa0202720:CDS | 25.0% |
| !! | TGTGCTGAAAATTGATTTAT+GGG | - | chr2_1:25284201-25284220 | Msa0202720:CDS | 25.0% |
| !!! | TTTTGATGGATTTCAATTGA+AGG | - | chr2_1:25284228-25284247 | Msa0202720:CDS | 25.0% |
| !! | ATTTCAATTGAAGGTTGTTT+TGG | - | chr2_1:25284237-25284256 | Msa0202720:CDS | 25.0% |
| ! | AAGAGATTCAATGATGATAA+GGG | - | chr2_1:25284338-25284357 | Msa0202720:CDS | 25.0% |
| ! | AGTTGATTATAAGACGAAAT+CGG | - | chr2_1:25284370-25284389 | Msa0202720:CDS | 25.0% |
| ! | CAAATCAAAATAAAAGGTTG+GGG | + | chr2_1:25284690-25284709 | None:intergenic | 25.0% |
| ! | GGGAAACAAATCAAAATAAA+AGG | + | chr2_1:25284696-25284715 | None:intergenic | 25.0% |
| ! | ATTACTGGGAAAAAAAAACA+AGG | + | chr2_1:25284947-25284966 | None:intergenic | 25.0% |
| ! | AATTACTAATTGACATACCT+TGG | + | chr2_1:25285130-25285149 | None:intergenic | 25.0% |
| ! | TTGCTTGATATCACATATTA+AGG | - | chr2_1:25285202-25285221 | Msa0202720:CDS | 25.0% |
| !!! | TATTATTGATTTTGGGAAGA+TGG | - | chr2_1:25285474-25285493 | Msa0202720:intron | 25.0% |
| !!! | ATATTTTTTAGGCATGAAAC+AGG | - | chr2_1:25285600-25285619 | Msa0202720:intron | 25.0% |
| ! | TTTCACAAACTAACTACATT+TGG | - | chr2_1:25286118-25286137 | Msa0202720:intron | 25.0% |
| ! | AAATTCCTACATTCAATTAC+TGG | + | chr2_1:25286252-25286271 | None:intergenic | 25.0% |
| ! | ATAAAAAATGCAAGGAACTA+TGG | + | chr2_1:25286346-25286365 | None:intergenic | 25.0% |
| ! | ATGATGAAGCAAAACTATAA+AGG | + | chr2_1:25286369-25286388 | None:intergenic | 25.0% |
| !!! | TTTATAGTTTTGCTTCATCA+TGG | - | chr2_1:25286368-25286387 | Msa0202720:intron | 25.0% |
| !!! | TTATTTTTGAGCAGGAAAAA+TGG | - | chr2_1:25286587-25286606 | Msa0202720:intron | 25.0% |
| ! | AATAAAATGAGTTAAGACCT+CGG | - | chr2_1:25286799-25286818 | Msa0202720:intron | 25.0% |
| !!! | GCATGCTAAATTTTAGTTTA+GGG | + | chr2_1:25286920-25286939 | None:intergenic | 25.0% |
| !!! | ATTGACTTTGTTGTTTTGTT+TGG | - | chr2_1:25287090-25287109 | Msa0202720:CDS | 25.0% |
| !!! | TTGACTTTGTTGTTTTGTTT+GGG | - | chr2_1:25287091-25287110 | Msa0202720:CDS | 25.0% |
| ! | ATTGAGAAAACCTGTAAAAT+CGG | + | chr2_1:25287339-25287358 | None:intergenic | 25.0% |
| !! | TTTTACAGGTTTTCTCAATA+TGG | - | chr2_1:25287340-25287359 | Msa0202720:intron | 25.0% |
| !! | TTTACAGGTTTTCTCAATAT+GGG | - | chr2_1:25287341-25287360 | Msa0202720:intron | 25.0% |
| !!! | ATAAGTTGGTCAATAAATCA+GGG | + | chr2_1:25287373-25287392 | None:intergenic | 25.0% |
| !! | TTCTTCTTTTTGGACTTTTT+TGG | + | chr2_1:25287404-25287423 | None:intergenic | 25.0% |
| ! | AATTTCCATTGTAACAATCA+GGG | + | chr2_1:25287748-25287767 | None:intergenic | 25.0% |
| ! | TAATTTCCATTGTAACAATC+AGG | + | chr2_1:25287749-25287768 | None:intergenic | 25.0% |
| ! | GAAATTATAAGAATAGGGAT+AGG | - | chr2_1:25287762-25287781 | Msa0202720:intron | 25.0% |
| ! | ACATTATAATTCTGATGAGA+AGG | - | chr2_1:25287877-25287896 | Msa0202720:CDS | 25.0% |
| !! | CGATTATCATTTAAAACAGA+AGG | - | chr2_1:25287913-25287932 | Msa0202720:CDS | 25.0% |
| !!! | ATGTAAGTTTTAGTCATGAT+CGG | - | chr2_1:25288050-25288069 | Msa0202720:intron | 25.0% |
| ! | AAAAGAATGATCAAAGTAGA+AGG | - | chr2_1:25288134-25288153 | Msa0202720:intron | 25.0% |
| ! | AGAAGGATAAAAGAAAAACA+TGG | - | chr2_1:25288244-25288263 | Msa0202720:CDS | 25.0% |
| ! | AGAAGGATAAAAGAAAAACA+TGG | - | chr2_1:25288244-25288263 | Msa0202720:CDS | 25.0% |
| !! | TTTTCACTTCTATGATATGA+AGG | + | chr2_1:25288889-25288908 | None:intergenic | 25.0% |
| TTCAAACACGATTCAATTCA+AGG | - | chr2_1:25283909-25283928 | Msa0202720:CDS | 30.0% | |
| TCGAATTGAAGGATTGAAAT+GGG | + | chr2_1:25283946-25283965 | None:intergenic | 30.0% | |
| ATCGAATTGAAGGATTGAAA+TGG | + | chr2_1:25283947-25283966 | None:intergenic | 30.0% | |
| ATTGAGCATAATCGAATTGA+AGG | + | chr2_1:25283957-25283976 | None:intergenic | 30.0% | |
| TGTTGAGAAAATAATGAGTG+GGG | + | chr2_1:25284024-25284043 | None:intergenic | 30.0% | |
| !!! | GATTTATGGGTTGTTTTTGA+TGG | - | chr2_1:25284214-25284233 | Msa0202720:CDS | 30.0% |
| ! | ATTTGTTTGAAATTGTGGTG+TGG | - | chr2_1:25284271-25284290 | Msa0202720:CDS | 30.0% |
| CAAGAGATTCAATGATGATA+AGG | - | chr2_1:25284337-25284356 | Msa0202720:CDS | 30.0% | |
| GTTGATTATAAGACGAAATC+GGG | - | chr2_1:25284371-25284390 | Msa0202720:CDS | 30.0% | |
| ACTTTCTAAACCAAAAACCA+TGG | - | chr2_1:25284411-25284430 | Msa0202720:CDS | 30.0% | |
| AGAACTGAATTGGTTAAAAG+GGG | + | chr2_1:25284554-25284573 | None:intergenic | 30.0% | |
| CAGAACTGAATTGGTTAAAA+GGG | + | chr2_1:25284555-25284574 | None:intergenic | 30.0% | |
| AATTAGAACCAGAACTGAAT+TGG | + | chr2_1:25284564-25284583 | None:intergenic | 30.0% | |
| !!! | TTTTTGGTTTGTGTATGTGT+AGG | - | chr2_1:25284745-25284764 | Msa0202720:CDS | 30.0% |
| GGAGAAGAAAAAAGAAGATA+TGG | - | chr2_1:25284853-25284872 | Msa0202720:CDS | 30.0% | |
| AAAAAAAACAAGGCAAAGTG+AGG | + | chr2_1:25284937-25284956 | None:intergenic | 30.0% | |
| CAAGAAATGAAAACCAATCA+CGG | + | chr2_1:25284978-25284997 | None:intergenic | 30.0% | |
| ACTTCAAATTCTTCTTCAGT+TGG | + | chr2_1:25285094-25285113 | None:intergenic | 30.0% | |
| AAGTTCTTAAAAATGCACCA+AGG | - | chr2_1:25285110-25285129 | Msa0202720:CDS | 30.0% | |
| ! | ACATATTAAGGAGTTTTGCT+TGG | - | chr2_1:25285214-25285233 | Msa0202720:CDS | 30.0% |
| !! | AGAAATTTGCTGATCATACT+AGG | - | chr2_1:25285273-25285292 | Msa0202720:CDS | 30.0% |
| TAAAAAAATCTGTGGTGATC+AGG | + | chr2_1:25285449-25285468 | None:intergenic | 30.0% | |
| CTGTGAGTATAATTGTTACT+TGG | - | chr2_1:25285964-25285983 | Msa0202720:intron | 30.0% | |
| ! | ACAACGCATATTTTCTTATC+AGG | + | chr2_1:25286073-25286092 | None:intergenic | 30.0% |
| AAATATGCGTTGTATCATGA+TGG | - | chr2_1:25286080-25286099 | Msa0202720:intron | 30.0% | |
| AATATGCGTTGTATCATGAT+GGG | - | chr2_1:25286081-25286100 | Msa0202720:intron | 30.0% | |
| ! | CTCAATCTCTAATTAGCTTA+AGG | - | chr2_1:25286200-25286219 | Msa0202720:CDS | 30.0% |
| GTACAATAATTGCTAGAAAC+AGG | + | chr2_1:25286299-25286318 | None:intergenic | 30.0% | |
| GTAAAGCTGAACAAAAATTC+CGG | - | chr2_1:25286448-25286467 | Msa0202720:intron | 30.0% | |
| TAAAGCTGAACAAAAATTCC+GGG | - | chr2_1:25286449-25286468 | Msa0202720:intron | 30.0% | |
| AAAAATTTCCTGCTCAAAAC+AGG | + | chr2_1:25286650-25286669 | None:intergenic | 30.0% | |
| TAGTAAAACAAACTCATAGC+TGG | + | chr2_1:25286694-25286713 | None:intergenic | 30.0% | |
| AGATAAAATCGTCTTGATAG+AGG | + | chr2_1:25286878-25286897 | None:intergenic | 30.0% | |
| !!! | GGCATGCTAAATTTTAGTTT+AGG | + | chr2_1:25286921-25286940 | None:intergenic | 30.0% |
| !!! | TATCAATATTGCCGACTTTT+GGG | + | chr2_1:25287063-25287082 | None:intergenic | 30.0% |
| !!! | TTATCAATATTGCCGACTTT+TGG | + | chr2_1:25287064-25287083 | None:intergenic | 30.0% |
| GAGGACATATTTGATGAATA+TGG | - | chr2_1:25287220-25287239 | Msa0202720:intron | 30.0% | |
| GACATATTTGATGAATATGG+AGG | - | chr2_1:25287223-25287242 | Msa0202720:intron | 30.0% | |
| TTGAGAAAACCTGTAAAATC+GGG | + | chr2_1:25287338-25287357 | None:intergenic | 30.0% | |
| !! | GATAAGTTGGTCAATAAATC+AGG | + | chr2_1:25287374-25287393 | None:intergenic | 30.0% |
| ! | CTTTTTGTGCTTCTTCTTTT+TGG | + | chr2_1:25287414-25287433 | None:intergenic | 30.0% |
| TATAAAGAGTCAAGTTCATC+AGG | - | chr2_1:25287530-25287549 | Msa0202720:intron | 30.0% | |
| !!! | TCTCGTTTAGTTTTTCTTCT+TGG | + | chr2_1:25287632-25287651 | None:intergenic | 30.0% |
| ! | AGAATATTCAAAAGCACAAG+AGG | - | chr2_1:25287837-25287856 | Msa0202720:CDS | 30.0% |
| !! | TGTTTTAAATGATAATCGGC+AGG | + | chr2_1:25287911-25287930 | None:intergenic | 30.0% |
| ! | AGATTGTTGATGAATACTTG+TGG | + | chr2_1:25288009-25288028 | None:intergenic | 30.0% |
| CTTTACAACATCAGAATCAT+CGG | + | chr2_1:25288212-25288231 | None:intergenic | 30.0% | |
| TAAAGAATGATCGAAGTAGA+AGG | - | chr2_1:25288227-25288246 | Msa0202720:CDS | 30.0% | |
| ! | CTTTTCAACATCAGAATCAT+CGG | + | chr2_1:25288119-25288138 | None:intergenic | 30.0% |
| AAAAGAATGATCGAAGTAGA+AGG | - | chr2_1:25288320-25288339 | Msa0202720:CDS | 30.0% | |
| AGAAGGATCAAAGAAAAACA+TGG | - | chr2_1:25288430-25288449 | Msa0202720:five_prime_UTR | 30.0% | |
| ! | CTTTTCAACATCAGAATCAT+CGG | + | chr2_1:25288119-25288138 | None:intergenic | 30.0% |
| ! | CTTTTCAACATCAGAATCAT+CGG | + | chr2_1:25288119-25288138 | None:intergenic | 30.0% |
| AAAAGAATGATCGAAGAAGA+AGG | - | chr2_1:25288599-25288618 | Msa0202720:intron | 30.0% | |
| ! | CTTTTCAACATCAGAATCAT+CGG | + | chr2_1:25288119-25288138 | None:intergenic | 30.0% |
| AGGATCAAAGAAAAACATCA+CGG | - | chr2_1:25288805-25288824 | Msa0202720:five_prime_UTR | 30.0% | |
| AGCTACGATGATTGATAGAT+AGG | + | chr2_1:25283814-25283833 | None:intergenic | 35.0% | |
| ACTGTTCCGAATTCTTCTTT+GGG | - | chr2_1:25283841-25283860 | Msa0202720:CDS | 35.0% | |
| TAGAGGAAGAAGAAGAAGAA+GGG | - | chr2_1:25283870-25283889 | Msa0202720:CDS | 35.0% | |
| ! | GGGGTATTTGTTTGAAATTG+TGG | - | chr2_1:25284266-25284285 | Msa0202720:CDS | 35.0% |
| AGATTCAATGATGATAAGGG+TGG | - | chr2_1:25284341-25284360 | Msa0202720:CDS | 35.0% | |
| ! | CGTTGATTAGGATAAGACAA+AGG | + | chr2_1:25284440-25284459 | None:intergenic | 35.0% |
| TTTGTTCAGCAATCCACTTA+CGG | + | chr2_1:25284463-25284482 | None:intergenic | 35.0% | |
| TGAATTGGTTAAAAGGGGAA+GGG | + | chr2_1:25284549-25284568 | None:intergenic | 35.0% | |
| CCAGAACTGAATTGGTTAAA+AGG | + | chr2_1:25284556-25284575 | None:intergenic | 35.0% | |
| ! | CCTTTTAACCAATTCAGTTC+TGG | - | chr2_1:25284553-25284572 | Msa0202720:CDS | 35.0% |
| ATACTGCAAAATGCAACAAG+AGG | + | chr2_1:25284594-25284613 | None:intergenic | 35.0% | |
| ATCAAAATAAAAGGTTGGGG+TGG | + | chr2_1:25284687-25284706 | None:intergenic | 35.0% | |
| !! | TTTGATTTGTTTCCCCTATG+TGG | - | chr2_1:25284701-25284720 | Msa0202720:CDS | 35.0% |
| !! | TTGATTTGTTTCCCCTATGT+GGG | - | chr2_1:25284702-25284721 | Msa0202720:CDS | 35.0% |
| TCACGGAAAAACAGATTACT+GGG | + | chr2_1:25284961-25284980 | None:intergenic | 35.0% | |
| ATCACGGAAAAACAGATTAC+TGG | + | chr2_1:25284962-25284981 | None:intergenic | 35.0% | |
| !! | GTAATCTGTTTTTCCGTGAT+TGG | - | chr2_1:25284962-25284981 | Msa0202720:CDS | 35.0% |
| GTCTGAATCACTTAATTCCT+AGG | - | chr2_1:25285011-25285030 | Msa0202720:CDS | 35.0% | |
| !! | TAATTCTTGCTTTTCTTGCG+AGG | - | chr2_1:25285145-25285164 | Msa0202720:CDS | 35.0% |
| !!! | CTTGCGAGGATTAGTTTTTA+TGG | - | chr2_1:25285159-25285178 | Msa0202720:CDS | 35.0% |
| !!! | TGGTGGCATTCTTTTTAGTT+AGG | - | chr2_1:25285179-25285198 | Msa0202720:CDS | 35.0% |
| GTACTGAAATCTGTAGTATG+AGG | - | chr2_1:25285375-25285394 | Msa0202720:intron | 35.0% | |
| !!! | TGCATCCTAGATCTCTTTTT+TGG | - | chr2_1:25285398-25285417 | Msa0202720:intron | 35.0% |
| !!! | GCATCCTAGATCTCTTTTTT+GGG | - | chr2_1:25285399-25285418 | Msa0202720:intron | 35.0% |
| !!! | CATCCTAGATCTCTTTTTTG+GGG | - | chr2_1:25285400-25285419 | Msa0202720:intron | 35.0% |
| AATCCCCAAAAAAGAGATCT+AGG | + | chr2_1:25285406-25285425 | None:intergenic | 35.0% | |
| ! | TGTTTAAGATGTGGGAACTA+TGG | - | chr2_1:25285672-25285691 | Msa0202720:intron | 35.0% |
| TTCAATCTACTTTCCTCGTT+TGG | + | chr2_1:25285744-25285763 | None:intergenic | 35.0% | |
| CAATTTAGTCCTTGACATTG+TGG | - | chr2_1:25285855-25285874 | Msa0202720:intron | 35.0% | |
| ! | TCTAATTAGCTTAAGGTCAC+CGG | - | chr2_1:25286207-25286226 | Msa0202720:CDS | 35.0% |
| ! | TACTGGTTGCATGTGAATTT+AGG | + | chr2_1:25286235-25286254 | None:intergenic | 35.0% |
| TGCAACCAGTAATTGAATGT+AGG | - | chr2_1:25286244-25286263 | Msa0202720:CDS | 35.0% | |
| CAATAATTGCTAGAAACAGG+TGG | + | chr2_1:25286296-25286315 | None:intergenic | 35.0% | |
| AAAGCTGAACAAAAATTCCG+GGG | - | chr2_1:25286450-25286469 | Msa0202720:intron | 35.0% | |
| AGCATAGAGCAATAGACAAA+AGG | - | chr2_1:25286613-25286632 | Msa0202720:intron | 35.0% | |
| !!! | GAGCAGGAAATTTTTTTCGT+AGG | - | chr2_1:25286655-25286674 | Msa0202720:intron | 35.0% |
| AAGCCAAATTTGCACGAATT+TGG | - | chr2_1:25286774-25286793 | Msa0202720:intron | 35.0% | |
| TGTCCAAATTCGTGCAAATT+TGG | + | chr2_1:25286780-25286799 | None:intergenic | 35.0% | |
| TCAAACTCTCCTTAGTCTAA+AGG | + | chr2_1:25286847-25286866 | None:intergenic | 35.0% | |
| !! | TAGTGGCTCAATTTGCTATT+GGG | - | chr2_1:25286959-25286978 | Msa0202720:CDS | 35.0% |
| !!! | ATCAATATTGCCGACTTTTG+GGG | + | chr2_1:25287062-25287081 | None:intergenic | 35.0% |
| !! | AATGATGCAGCCTCTAAAAT+GGG | - | chr2_1:25287114-25287133 | Msa0202720:intron | 35.0% |
| ATCAAATATGTCCTCTTCCT+CGG | + | chr2_1:25287215-25287234 | None:intergenic | 35.0% | |
| !! | GTAATTGTGGTTGATTTGGT+TGG | + | chr2_1:25287314-25287333 | None:intergenic | 35.0% |
| TGTAAAATCGGGAGTAATTG+TGG | + | chr2_1:25287327-25287346 | None:intergenic | 35.0% | |
| ! | ACAATTACTCCCGATTTTAC+AGG | - | chr2_1:25287326-25287345 | Msa0202720:intron | 35.0% |
| !!! | CTTTCCATGATCTTTTTCAG+AGG | + | chr2_1:25287564-25287583 | None:intergenic | 35.0% |
| AAAGAGCAGAAACAAGCAAT+CGG | - | chr2_1:25287580-25287599 | Msa0202720:intron | 35.0% | |
| GATTATGATCATCCTATGCA+CGG | - | chr2_1:25287671-25287690 | Msa0202720:CDS | 35.0% | |
| AATTCTGATGAGAAGGATTC+TGG | - | chr2_1:25287884-25287903 | Msa0202720:CDS | 35.0% | |
| AGAAGGATCAAAGAAGAAAG+TGG | - | chr2_1:25288151-25288170 | Msa0202720:intron | 35.0% | |
| AAGAAAGTGGAAGTCAAAAG+AGG | - | chr2_1:25288164-25288183 | Msa0202720:intron | 35.0% | |
| ! | CTTTTCAACGTCAGAATCAT+CGG | + | chr2_1:25288398-25288417 | None:intergenic | 35.0% |
| AAAAGGATAGTCGAAGTAGA+AGG | - | chr2_1:25288413-25288432 | Msa0202720:exon | 35.0% | |
| TCTTATTCTTCCGATGATTC+TGG | - | chr2_1:25288292-25288311 | Msa0202720:CDS | 35.0% | |
| AAAAGGATAGTCGAAGTAGA+AGG | - | chr2_1:25288413-25288432 | Msa0202720:exon | 35.0% | |
| ATCGGAAGAATAAGAACACT+CGG | + | chr2_1:25288752-25288771 | None:intergenic | 35.0% | |
| CGATGATTCTGATGTTGAAA+AGG | - | chr2_1:25288303-25288322 | Msa0202720:CDS | 35.0% | |
| GATTCTGATGTTGAAAAGGA+TGG | - | chr2_1:25288772-25288791 | Msa0202720:intron | 35.0% | |
| ! | AAGGCTTTTCTCTGTTATGT+TGG | + | chr2_1:25288870-25288889 | None:intergenic | 35.0% |
| ! | CGTATGTTTTTCACGATGAT+TGG | + | chr2_1:25288917-25288936 | None:intergenic | 35.0% |
| CACTGTTCCGAATTCTTCTT+TGG | - | chr2_1:25283840-25283859 | Msa0202720:CDS | 40.0% | |
| CAATCGCCCAAAGAAGAATT+CGG | + | chr2_1:25283850-25283869 | None:intergenic | 40.0% | |
| GTAGAGGAAGAAGAAGAAGA+AGG | - | chr2_1:25283869-25283888 | Msa0202720:CDS | 40.0% | |
| ! | GGGGACTTTTATCAAACAAG+TGG | + | chr2_1:25284005-25284024 | None:intergenic | 40.0% |
| !!! | TGAAGGTTGTTTTGGTTGAG+AGG | - | chr2_1:25284245-25284264 | Msa0202720:CDS | 40.0% |
| !!! | GAAGGTTGTTTTGGTTGAGA+GGG | - | chr2_1:25284246-25284265 | Msa0202720:CDS | 40.0% |
| !!! | AAGGTTGTTTTGGTTGAGAG+GGG | - | chr2_1:25284247-25284266 | Msa0202720:CDS | 40.0% |
| TTGAAATTGTGGTGTGGAGA+AGG | - | chr2_1:25284277-25284296 | Msa0202720:CDS | 40.0% | |
| TTCAATGATGATAAGGGTGG+AGG | - | chr2_1:25284344-25284363 | Msa0202720:CDS | 40.0% | |
| TCAATGATGATAAGGGTGGA+GGG | - | chr2_1:25284345-25284364 | Msa0202720:CDS | 40.0% | |
| ! | ACAAAGGATGCCATGGTTTT+TGG | + | chr2_1:25284424-25284443 | None:intergenic | 40.0% |
| CTGAATTGGTTAAAAGGGGA+AGG | + | chr2_1:25284550-25284569 | None:intergenic | 40.0% | |
| ! | TTGCATTTTGCAGTATGCTC+AGG | - | chr2_1:25284598-25284617 | Msa0202720:CDS | 40.0% |
| TAAAAGGTTGGGGTGGAAAA+TGG | + | chr2_1:25284680-25284699 | None:intergenic | 40.0% | |
| !! | TTGGTTTGTGTATGTGTAGG+TGG | - | chr2_1:25284748-25284767 | Msa0202720:CDS | 40.0% |
| TTTATGTATGTTCGTCCTCC+TGG | - | chr2_1:25284791-25284810 | Msa0202720:CDS | 40.0% | |
| !! | TTACAATCCTGAAAGTGCCA+AGG | - | chr2_1:25284814-25284833 | Msa0202720:CDS | 40.0% |
| ! | AGGAAGTACAATGAAGAGGA+AGG | + | chr2_1:25284914-25284933 | None:intergenic | 40.0% |
| AAAAACAAGGCAAAGTGAGG+AGG | + | chr2_1:25284934-25284953 | None:intergenic | 40.0% | |
| !!! | GGTTTTTTCTTCTCTCCATG+GGG | + | chr2_1:25285040-25285059 | None:intergenic | 40.0% |
| !!! | CGGTTTTTTCTTCTCTCCAT+GGG | + | chr2_1:25285041-25285060 | None:intergenic | 40.0% |
| !!! | TCGGTTTTTTCTTCTCTCCA+TGG | + | chr2_1:25285042-25285061 | None:intergenic | 40.0% |
| ATGGAGAGAAGAAAAAACCG+AGG | - | chr2_1:25285041-25285060 | Msa0202720:CDS | 40.0% | |
| !!! | GCGAGGATTAGTTTTTATGG+TGG | - | chr2_1:25285162-25285181 | Msa0202720:CDS | 40.0% |
| TGCTGATCATACTAGGATCT+TGG | - | chr2_1:25285280-25285299 | Msa0202720:CDS | 40.0% | |
| ! | TTTTTATAGCACCAGCCACT+TGG | - | chr2_1:25285317-25285336 | Msa0202720:CDS | 40.0% |
| GTCCAAGATCCTAGTATGAT+CGG | + | chr2_1:25285285-25285304 | None:intergenic | 40.0% | |
| !!! | TCTTTTTTGGGGATTGATGC+AGG | - | chr2_1:25285411-25285430 | Msa0202720:intron | 40.0% |
| !!! | CTTTTTTGGGGATTGATGCA+GGG | - | chr2_1:25285412-25285431 | Msa0202720:intron | 40.0% |
| TTGTCGTGTCAGAAATAGAG+TGG | + | chr2_1:25285504-25285523 | None:intergenic | 40.0% | |
| !! | CTATTTCTGACACGACAATG+TGG | - | chr2_1:25285506-25285525 | Msa0202720:CDS | 40.0% |
| TTGCGAATTTCGACTCCAAA+AGG | + | chr2_1:25285645-25285664 | None:intergenic | 40.0% | |
| GGCATTATAGCATCCTTCAA+GGG | + | chr2_1:25285723-25285742 | None:intergenic | 40.0% | |
| TGGCATTATAGCATCCTTCA+AGG | + | chr2_1:25285724-25285743 | None:intergenic | 40.0% | |
| ! | TGTATCGATCCACAATGTCA+AGG | + | chr2_1:25285867-25285886 | None:intergenic | 40.0% |
| ATTTATGCCTGCATCGTGTT+TGG | - | chr2_1:25285886-25285905 | Msa0202720:intron | 40.0% | |
| AATTAAGCCAAACACGATGC+AGG | + | chr2_1:25285896-25285915 | None:intergenic | 40.0% | |
| ACAGGGAGAAATGGTATTCT+CGG | + | chr2_1:25286158-25286177 | None:intergenic | 40.0% | |
| TTGAGATTTCAGACTGACAG+AGG | + | chr2_1:25286185-25286204 | None:intergenic | 40.0% | |
| ! | CTAATTAGCTTAAGGTCACC+GGG | - | chr2_1:25286208-25286227 | Msa0202720:CDS | 40.0% |
| TTGCATGTGAATTTAGGTCC+CGG | + | chr2_1:25286229-25286248 | None:intergenic | 40.0% | |
| ! | GGATATGAAGCACTTTCTCT+AGG | + | chr2_1:25286325-25286344 | None:intergenic | 40.0% |
| ACACAAACTCATCAGAGACT+GGG | + | chr2_1:25286405-25286424 | None:intergenic | 40.0% | |
| AACACAAACTCATCAGAGAC+TGG | + | chr2_1:25286406-25286425 | None:intergenic | 40.0% | |
| GTCTCTGATGAGTTTGTGTT+TGG | - | chr2_1:25286406-25286425 | Msa0202720:intron | 40.0% | |
| TGAAGCATGAGTCTCTAAAC+TGG | + | chr2_1:25286509-25286528 | None:intergenic | 40.0% | |
| TCATGCTTCAAGAAAGAGTG+TGG | - | chr2_1:25286519-25286538 | Msa0202720:intron | 40.0% | |
| ! | AACCTGTTTGCTACACTTCA+CGG | + | chr2_1:25286557-25286576 | None:intergenic | 40.0% |
| CCTGCTCAAAAATAAACCCT+TGG | + | chr2_1:25286582-25286601 | None:intergenic | 40.0% | |
| !!! | CCAAGGGTTTATTTTTGAGC+AGG | - | chr2_1:25286579-25286598 | Msa0202720:intron | 40.0% |
| TAGAGCAATAGACAAAAGGC+TGG | - | chr2_1:25286617-25286636 | Msa0202720:intron | 40.0% | |
| AGAGCAATAGACAAAAGGCT+GGG | - | chr2_1:25286618-25286637 | Msa0202720:intron | 40.0% | |
| !! | TTTTTCGTAGGAGTTGACTC+TGG | - | chr2_1:25286667-25286686 | Msa0202720:intron | 40.0% |
| AATGAGTTAAGACCTCGGAA+AGG | - | chr2_1:25286804-25286823 | Msa0202720:intron | 40.0% | |
| GAAAGGAAAAATTCCCTCAC+AGG | - | chr2_1:25286821-25286840 | Msa0202720:intron | 40.0% | |
| TTAGGGTGCAGATAATCTGA+AGG | + | chr2_1:25286903-25286922 | None:intergenic | 40.0% | |
| CTACGAAAGACATTCTTGGA+AGG | + | chr2_1:25286942-25286961 | None:intergenic | 40.0% | |
| TCCAAGAATGTCTTTCGTAG+TGG | - | chr2_1:25286942-25286961 | Msa0202720:CDS | 40.0% | |
| !! | GTAGTGGCTCAATTTGCTAT+TGG | - | chr2_1:25286958-25286977 | Msa0202720:CDS | 40.0% |
| !!! | TCAATATTGCCGACTTTTGG+GGG | + | chr2_1:25287061-25287080 | None:intergenic | 40.0% |
| ! | GAATGATGCAGCCTCTAAAA+TGG | - | chr2_1:25287113-25287132 | Msa0202720:intron | 40.0% |
| TTTGGTTGGACAAACATCTG+AGG | + | chr2_1:25287300-25287319 | None:intergenic | 40.0% | |
| GGGAGTAATTGTGGTTGATT+TGG | + | chr2_1:25287318-25287337 | None:intergenic | 40.0% | |
| AGCAGCTATTGCATTCAGAA+AGG | - | chr2_1:25287435-25287454 | Msa0202720:intron | 40.0% | |
| GCAGCTATTGCATTCAGAAA+GGG | - | chr2_1:25287436-25287455 | Msa0202720:intron | 40.0% | |
| !! | AGGGAAGCATCTTTAGATGA+TGG | - | chr2_1:25287455-25287474 | Msa0202720:intron | 40.0% |
| ! | TCTGCCTCTGAAAAAGATCA+TGG | - | chr2_1:25287557-25287576 | Msa0202720:intron | 40.0% |
| !! | AAGGCATTCCTTTTCATCTG+AGG | - | chr2_1:25287715-25287734 | Msa0202720:intron | 40.0% |
| TGAAGATCCTGACATTGACA+GGG | - | chr2_1:25287799-25287818 | Msa0202720:intron | 40.0% | |
| !!! | TGGCTGCTTATTTTATCCTC+GGG | + | chr2_1:25287989-25288008 | None:intergenic | 40.0% |
| !!! | GTGGCTGCTTATTTTATCCT+CGG | + | chr2_1:25287990-25288009 | None:intergenic | 40.0% |
| CAATCTACTGCGATTCTCAA+AGG | - | chr2_1:25288023-25288042 | Msa0202720:intron | 40.0% | |
| CGATGATTCTGACGTTGAAA+AGG | - | chr2_1:25288396-25288415 | Msa0202720:CDS | 40.0% | |
| ! | CTTTTCAACGCCAGAATCAT+CGG | + | chr2_1:25288677-25288696 | None:intergenic | 40.0% |
| AAAAGGATGGTCGAAGTAGA+AGG | - | chr2_1:25288785-25288804 | Msa0202720:intron | 40.0% | |
| AAACATCACGGTATGCTTGA+TGG | - | chr2_1:25288817-25288836 | Msa0202720:five_prime_UTR | 40.0% | |
| TCTTCTTTGGGCGATTGTAG+AGG | - | chr2_1:25283853-25283872 | Msa0202720:CDS | 45.0% | |
| CAATGATGATAAGGGTGGAG+GGG | - | chr2_1:25284346-25284365 | Msa0202720:CDS | 45.0% | |
| GGATAAGACAAAGGATGCCA+TGG | + | chr2_1:25284431-25284450 | None:intergenic | 45.0% | |
| ATCCTAATCAACGCCGTAAG+TGG | - | chr2_1:25284447-25284466 | Msa0202720:CDS | 45.0% | |
| !! | ATCCACTTACGGCGTTGATT+AGG | + | chr2_1:25284452-25284471 | None:intergenic | 45.0% |
| !! | GTTAAAAGGGGAAGGGTATC+AGG | + | chr2_1:25284542-25284561 | None:intergenic | 45.0% |
| GACATCTCTCATCTCGAAGA+AGG | - | chr2_1:25284640-25284659 | Msa0202720:CDS | 45.0% | |
| TCTCATCTCGAAGAAGGACA+AGG | - | chr2_1:25284646-25284665 | Msa0202720:CDS | 45.0% | |
| CTCGAAGAAGGACAAGGAAA+AGG | - | chr2_1:25284652-25284671 | Msa0202720:CDS | 45.0% | |
| ATTCGATTGCAGCCCACATA+GGG | + | chr2_1:25284717-25284736 | None:intergenic | 45.0% | |
| AATTCGATTGCAGCCCACAT+AGG | + | chr2_1:25284718-25284737 | None:intergenic | 45.0% | |
| CTTTCAGGATTGTAACCAGG+AGG | + | chr2_1:25284809-25284828 | None:intergenic | 45.0% | |
| GCACTTTCAGGATTGTAACC+AGG | + | chr2_1:25284812-25284831 | None:intergenic | 45.0% | |
| !! | CCATCAGGATTGGTTTGTGT+AGG | + | chr2_1:25284890-25284909 | None:intergenic | 45.0% |
| CCTACACAAACCAATCCTGA+TGG | - | chr2_1:25284887-25284906 | Msa0202720:CDS | 45.0% | |
| AATGAAGAGGAAGGTCCATC+AGG | + | chr2_1:25284905-25284924 | None:intergenic | 45.0% | |
| ! | GAGGAGGAAGTACAATGAAG+AGG | + | chr2_1:25284918-25284937 | None:intergenic | 45.0% |
| ! | TTTTTCTTCTCTCCATGGGG+TGG | + | chr2_1:25285037-25285056 | None:intergenic | 45.0% |
| ! | CCGAAAACATCTTTTGGCCT+CGG | + | chr2_1:25285061-25285080 | None:intergenic | 45.0% |
| ! | CCGAGGCCAAAAGATGTTTT+CGG | - | chr2_1:25285058-25285077 | Msa0202720:CDS | 45.0% |
| !! | CTTCTTCAGTTGGTAGAGCA+CGG | + | chr2_1:25285084-25285103 | None:intergenic | 45.0% |
| TCACCATTGCCGATCATACT+AGG | - | chr2_1:25285343-25285362 | Msa0202720:CDS | 45.0% | |
| GATCCTAGTATGATCGGCAA+TGG | + | chr2_1:25285349-25285368 | None:intergenic | 45.0% | |
| TGCCGATCATACTAGGATCT+TGG | - | chr2_1:25285350-25285369 | Msa0202720:CDS | 45.0% | |
| ATGAAACAGGAGTTGCTGCA+AGG | - | chr2_1:25285613-25285632 | Msa0202720:intron | 45.0% | |
| TGAAACAGGAGTTGCTGCAA+GGG | - | chr2_1:25285614-25285633 | Msa0202720:intron | 45.0% | |
| GACATTCACGATCACCACTT+TGG | + | chr2_1:25285701-25285720 | None:intergenic | 45.0% | |
| TGATCGTGAATGTCCCTTGA+AGG | - | chr2_1:25285707-25285726 | Msa0202720:intron | 45.0% | |
| GGATGCTATAATGCCAAACG+AGG | - | chr2_1:25285728-25285747 | Msa0202720:intron | 45.0% | |
| GGGCAAGGATAGCATTCAAA+GGG | + | chr2_1:25285776-25285795 | None:intergenic | 45.0% | |
| TGGGCAAGGATAGCATTCAA+AGG | + | chr2_1:25285777-25285796 | None:intergenic | 45.0% | |
| GACCTCAGTAAGATCTGTGT+GGG | + | chr2_1:25285796-25285815 | None:intergenic | 45.0% | |
| TGACCTCAGTAAGATCTGTG+TGG | + | chr2_1:25285797-25285816 | None:intergenic | 45.0% | |
| AGAGGAAAGACAGGGAGAAA+TGG | + | chr2_1:25286167-25286186 | None:intergenic | 45.0% | |
| AGACTGACAGAGGAAAGACA+GGG | + | chr2_1:25286175-25286194 | None:intergenic | 45.0% | |
| CTGAACAAAAATTCCGGGGA+GGG | - | chr2_1:25286454-25286473 | Msa0202720:intron | 45.0% | |
| GCACAAAGATCCAGAATCCA+GGG | + | chr2_1:25286487-25286506 | None:intergenic | 45.0% | |
| ! | ACCTGTTTGCTACACTTCAC+GGG | + | chr2_1:25286556-25286575 | None:intergenic | 45.0% |
| TGTAGCAAACAGGTTGTCCA+AGG | - | chr2_1:25286562-25286581 | Msa0202720:intron | 45.0% | |
| GTAGCAAACAGGTTGTCCAA+GGG | - | chr2_1:25286563-25286582 | Msa0202720:intron | 45.0% | |
| GAGCAATAGACAAAAGGCTG+GGG | - | chr2_1:25286619-25286638 | Msa0202720:intron | 45.0% | |
| AGCAATAGACAAAAGGCTGG+GGG | - | chr2_1:25286620-25286639 | Msa0202720:intron | 45.0% | |
| ! | GAGGGAATTTTTCCTTTCCG+AGG | + | chr2_1:25286819-25286838 | None:intergenic | 45.0% |
| CTTAGTCTAAAGGCCTGTGA+GGG | + | chr2_1:25286837-25286856 | None:intergenic | 45.0% | |
| GCCACTACGAAAGACATTCT+TGG | + | chr2_1:25286946-25286965 | None:intergenic | 45.0% | |
| ! | TGCTTGAGCTCCCATTTTAG+AGG | + | chr2_1:25287127-25287146 | None:intergenic | 45.0% |
| ! | AAACATCTGAGGCGTCATCA+AGG | + | chr2_1:25287289-25287308 | None:intergenic | 45.0% |
| ATGATCATCCTATGCACGGT+AGG | - | chr2_1:25287675-25287694 | Msa0202720:CDS | 45.0% | |
| TGTTTACTCCTACCGTGCAT+AGG | + | chr2_1:25287686-25287705 | None:intergenic | 45.0% | |
| ATGCACGGTAGGAGTAAACA+TGG | - | chr2_1:25287686-25287705 | Msa0202720:intron | 45.0% | |
| ! | TCCTTTTCATCTGAGGAGTC+TGG | - | chr2_1:25287722-25287741 | Msa0202720:intron | 45.0% |
| TCTGGCCCTGATTGTTACAA+TGG | - | chr2_1:25287740-25287759 | Msa0202720:intron | 45.0% | |
| CTGAAGATCCTGACATTGAC+AGG | - | chr2_1:25287798-25287817 | Msa0202720:intron | 45.0% | |
| ! | CAAAAGCACAAGAGGACACA+TGG | - | chr2_1:25287845-25287864 | Msa0202720:CDS | 45.0% |
| TAATCATCAACGTCAACCCG+AGG | - | chr2_1:25287970-25287989 | Msa0202720:intron | 45.0% | |
| TTTAGTCATGATCGGTACCG+TGG | - | chr2_1:25288058-25288077 | Msa0202720:CDS | 45.0% | |
| ! | CGATGATTCTGGCGTTGAAA+AGG | - | chr2_1:25288675-25288694 | Msa0202720:intron | 45.0% |
| !!! | AAAATTTATTTAATTTTAGT+TGG | - | chr2_1:25284127-25284146 | Msa0202720:CDS | 5.0% |
| TGGTGTGGAGAAGGAGAAGA+TGG | - | chr2_1:25284286-25284305 | Msa0202720:CDS | 50.0% | |
| TGTGGAGAAGGAGAAGATGG+AGG | - | chr2_1:25284289-25284308 | Msa0202720:CDS | 50.0% | |
| GTGGAGAAGGAGAAGATGGA+GGG | - | chr2_1:25284290-25284309 | Msa0202720:CDS | 50.0% | |
| CACGAGCAACCTCTTCAGTT+CGG | + | chr2_1:25284505-25284524 | None:intergenic | 50.0% | |
| AACTGAAGAGGTTGCTCGTG+AGG | - | chr2_1:25284505-25284524 | Msa0202720:CDS | 50.0% | |
| TTCGATTGCAGCCCACATAG+GGG | + | chr2_1:25284716-25284735 | None:intergenic | 50.0% | |
| CTCATTCAGTTCTGCAGCCT+TGG | + | chr2_1:25284834-25284853 | None:intergenic | 50.0% | |
| CAAGGCTGCAGAACTGAATG+AGG | - | chr2_1:25284832-25284851 | Msa0202720:CDS | 50.0% | |
| AGAGGAAGGTCCATCAGGAT+TGG | + | chr2_1:25284900-25284919 | None:intergenic | 50.0% | |
| TTAATTCCTAGGCCACCCCA+TGG | - | chr2_1:25285022-25285041 | Msa0202720:CDS | 50.0% | |
| ! | GCACGGCCGAAAACATCTTT+TGG | + | chr2_1:25285067-25285086 | None:intergenic | 50.0% |
| AATGGTGATCTCCAAGTGGC+TGG | + | chr2_1:25285331-25285350 | None:intergenic | 50.0% | |
| ! | GCTGCAAGGGCAAAACCTTT+TGG | - | chr2_1:25285627-25285646 | Msa0202720:intron | 50.0% |
| GGGAACTATGGTCACCAAAG+TGG | - | chr2_1:25285684-25285703 | Msa0202720:intron | 50.0% | |
| CAGTAAGATCTGTGTGGGCA+AGG | + | chr2_1:25285791-25285810 | None:intergenic | 50.0% | |
| TGCCCACACAGATCTTACTG+AGG | - | chr2_1:25285791-25285810 | Msa0202720:intron | 50.0% | |
| CAGACTGACAGAGGAAAGAC+AGG | + | chr2_1:25286176-25286195 | None:intergenic | 50.0% | |
| GCTGAACAAAAATTCCGGGG+AGG | - | chr2_1:25286453-25286472 | Msa0202720:intron | 50.0% | |
| ! | GGGAGATTTTCCCTGGATTC+TGG | - | chr2_1:25286474-25286493 | Msa0202720:intron | 50.0% |
| GGCACAAAGATCCAGAATCC+AGG | + | chr2_1:25286488-25286507 | None:intergenic | 50.0% | |
| ACCCGTGAAGTGTAGCAAAC+AGG | - | chr2_1:25286552-25286571 | Msa0202720:intron | 50.0% | |
| CCTTAGTCTAAAGGCCTGTG+AGG | + | chr2_1:25286838-25286857 | None:intergenic | 50.0% | |
| CCTCACAGGCCTTTAGACTA+AGG | - | chr2_1:25286835-25286854 | Msa0202720:intron | 50.0% | |
| ! | TCTGGTTTAAACCCTCCACG+AGG | + | chr2_1:25287169-25287188 | None:intergenic | 50.0% |
| ! | TCGGCAACTATCTGCTGGTT+GGG | + | chr2_1:25287196-25287215 | None:intergenic | 50.0% |
| GGAGTAAACATGGCAAGCGA+AGG | - | chr2_1:25287696-25287715 | Msa0202720:intron | 50.0% | |
| GCCAGACTCCTCAGATGAAA+AGG | + | chr2_1:25287726-25287745 | None:intergenic | 50.0% | |
| CGATCATCCCTGTCAATGTC+AGG | + | chr2_1:25287809-25287828 | None:intergenic | 50.0% | |
| GACATTGACAGGGATGATCG+AGG | - | chr2_1:25287809-25287828 | Msa0202720:CDS | 50.0% | |
| ACCTGCTCTTCTGACTTCCA+CGG | + | chr2_1:25288078-25288097 | None:intergenic | 50.0% | |
| GAAGGAGAAGATGGAGGGTG+AGG | - | chr2_1:25284295-25284314 | Msa0202720:CDS | 55.0% | |
| GAGAAGATGGAGGGTGAGGA+AGG | - | chr2_1:25284299-25284318 | Msa0202720:CDS | 55.0% | |
| AAGATGGAGGGTGAGGAAGG+AGG | - | chr2_1:25284302-25284321 | Msa0202720:CDS | 55.0% | |
| ! | AGACGAAATCGGGTACTGCG+TGG | - | chr2_1:25284381-25284400 | Msa0202720:CDS | 55.0% |
| ACGTGAACGCCGAACTGAAG+AGG | - | chr2_1:25284493-25284512 | Msa0202720:CDS | 55.0% | |
| TCTGCAGCCTTGGCACTTTC+AGG | + | chr2_1:25284824-25284843 | None:intergenic | 55.0% | |
| CGGCAATGGTGATCTCCAAG+TGG | + | chr2_1:25285335-25285354 | None:intergenic | 55.0% | |
| !! | GGGGAAAGCCTGTTTTGAGC+AGG | - | chr2_1:25286639-25286658 | Msa0202720:intron | 55.0% |
| TTCCCCTCTCCCCCAAAAGT+CGG | - | chr2_1:25287049-25287068 | Msa0202720:CDS | 55.0% | |
| !!! | TTGCCGACTTTTGGGGGAGA+GGG | + | chr2_1:25287055-25287074 | None:intergenic | 55.0% |
| !!! | ATTGCCGACTTTTGGGGGAG+AGG | + | chr2_1:25287056-25287075 | None:intergenic | 55.0% |
| GAATCAGTCCTCCTCGTGGA+GGG | - | chr2_1:25287155-25287174 | Msa0202720:intron | 55.0% | |
| GGTTTAAACCCTCCACGAGG+AGG | + | chr2_1:25287166-25287185 | None:intergenic | 55.0% | |
| ! | CGGCAACTATCTGCTGGTTG+GGG | + | chr2_1:25287195-25287214 | None:intergenic | 55.0% |
| CTCGGCAACTATCTGCTGGT+TGG | + | chr2_1:25287197-25287216 | None:intergenic | 55.0% | |
| CAACCAGCAGATAGTTGCCG+AGG | - | chr2_1:25287195-25287214 | Msa0202720:intron | 55.0% | |
| CTTCCTCGGCAACTATCTGC+TGG | + | chr2_1:25287201-25287220 | None:intergenic | 55.0% | |
| GCAGATAGTTGCCGAGGAAG+AGG | - | chr2_1:25287201-25287220 | Msa0202720:intron | 55.0% | |
| ACCGTGGAAGTCAGAAGAGC+AGG | - | chr2_1:25288074-25288093 | Msa0202720:CDS | 55.0% | |
| ! | AGGGTGAGGAAGGAGGTGTG+AGG | - | chr2_1:25284309-25284328 | Msa0202720:CDS | 60.0% |
| GAGGTTGCTCGTGAGGCAAG+TGG | - | chr2_1:25284512-25284531 | Msa0202720:CDS | 60.0% | |
| TTCTCTCCATGGGGTGGCCT+AGG | + | chr2_1:25285031-25285050 | None:intergenic | 60.0% | |
| CCAGGGAAAATCTCCCTCCC+CGG | + | chr2_1:25286470-25286489 | None:intergenic | 60.0% | |
| !!! | TGCCGACTTTTGGGGGAGAG+GGG | + | chr2_1:25287054-25287073 | None:intergenic | 60.0% |
| TGGGAGCTCAAGCAGAAGCC+AGG | - | chr2_1:25287133-25287152 | Msa0202720:intron | 60.0% | |
| ! | CCACGAGGAGGACTGATTCC+TGG | + | chr2_1:25287154-25287173 | None:intergenic | 60.0% |
| CCAGGAATCAGTCCTCCTCG+TGG | - | chr2_1:25287151-25287170 | Msa0202720:intron | 60.0% | |
| GGAATCAGTCCTCCTCGTGG+AGG | - | chr2_1:25287154-25287173 | Msa0202720:intron | 60.0% | |
| ! | ATCTGCTGGTTGGGGTCGTC+TGG | + | chr2_1:25287187-25287206 | None:intergenic | 60.0% |
| ! | CCGGGGAGGGAGATTTTCCC+TGG | - | chr2_1:25286467-25286486 | Msa0202720:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 25283767 | 25288963 | 25283767 | ID=Msa0202720;Name=Msa0202720 |
| chr2_1 | mRNA | 25283767 | 25288963 | 25283767 | ID=Msa0202720-mRNA-1;Parent=Msa0202720;Name=Msa0202720-mRNA-1;_AED=0.11;_eAED=0.12;_QI=293|0.75|0.77|0.88|0.87|0.77|9|0|866 |
| chr2_1 | exon | 25283767 | 25285382 | 25283767 | ID=Msa0202720-mRNA-1:exon:9691;Parent=Msa0202720-mRNA-1 |
| chr2_1 | exon | 25285486 | 25285606 | 25285486 | ID=Msa0202720-mRNA-1:exon:9690;Parent=Msa0202720-mRNA-1 |
| chr2_1 | exon | 25286157 | 25286276 | 25286157 | ID=Msa0202720-mRNA-1:exon:9689;Parent=Msa0202720-mRNA-1 |
| chr2_1 | exon | 25286918 | 25287119 | 25286918 | ID=Msa0202720-mRNA-1:exon:9688;Parent=Msa0202720-mRNA-1 |
| chr2_1 | exon | 25287599 | 25287697 | 25287599 | ID=Msa0202720-mRNA-1:exon:9687;Parent=Msa0202720-mRNA-1 |
| chr2_1 | exon | 25287806 | 25287963 | 25287806 | ID=Msa0202720-mRNA-1:exon:9686;Parent=Msa0202720-mRNA-1 |
| chr2_1 | exon | 25288057 | 25288119 | 25288057 | ID=Msa0202720-mRNA-1:exon:9685;Parent=Msa0202720-mRNA-1 |
| chr2_1 | exon | 25288204 | 25288554 | 25288204 | ID=Msa0202720-mRNA-1:exon:9684;Parent=Msa0202720-mRNA-1 |
| chr2_1 | exon | 25288800 | 25288963 | 25288800 | ID=Msa0202720-mRNA-1:exon:9683;Parent=Msa0202720-mRNA-1 |
| chr2_1 | five_prime_UTR | 25288800 | 25288963 | 25288800 | ID=Msa0202720-mRNA-1:five_prime_utr;Parent=Msa0202720-mRNA-1 |
| chr2_1 | five_prime_UTR | 25288426 | 25288554 | 25288426 | ID=Msa0202720-mRNA-1:five_prime_utr;Parent=Msa0202720-mRNA-1 |
| chr2_1 | CDS | 25288204 | 25288425 | 25288204 | ID=Msa0202720-mRNA-1:cds;Parent=Msa0202720-mRNA-1 |
| chr2_1 | CDS | 25288057 | 25288119 | 25288057 | ID=Msa0202720-mRNA-1:cds;Parent=Msa0202720-mRNA-1 |
| chr2_1 | CDS | 25287806 | 25287963 | 25287806 | ID=Msa0202720-mRNA-1:cds;Parent=Msa0202720-mRNA-1 |
| chr2_1 | CDS | 25287599 | 25287697 | 25287599 | ID=Msa0202720-mRNA-1:cds;Parent=Msa0202720-mRNA-1 |
| chr2_1 | CDS | 25286918 | 25287119 | 25286918 | ID=Msa0202720-mRNA-1:cds;Parent=Msa0202720-mRNA-1 |
| chr2_1 | CDS | 25286157 | 25286276 | 25286157 | ID=Msa0202720-mRNA-1:cds;Parent=Msa0202720-mRNA-1 |
| chr2_1 | CDS | 25285486 | 25285606 | 25285486 | ID=Msa0202720-mRNA-1:cds;Parent=Msa0202720-mRNA-1 |
| chr2_1 | CDS | 25283767 | 25285382 | 25283767 | ID=Msa0202720-mRNA-1:cds;Parent=Msa0202720-mRNA-1 |
| Gene Sequence |
| Protein sequence |
