Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0240720 | KEH37012.1 | 95.514 | 914 | 34 | 3 | 1 | 908 | 1 | 913 | 0.0 | 1649 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0240720 | sp|C6L7U1|LIN1_LOTJA | 30.403 | 546 | 351 | 9 | 371 | 904 | 622 | 1150 | 5.57e-58 | 220 |
| Msa0240720 | sp|C6L7U1|LIN1_LOTJA | 25.000 | 264 | 151 | 8 | 64 | 286 | 14 | 271 | 1.09e-12 | 76.3 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0240720 | A0A072V5B7 | 95.514 | 914 | 34 | 3 | 1 | 908 | 1 | 913 | 0.0 | 1649 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0008850 | Msa0240720 | 0.823023 | 1.731766e-53 | -8.615850e-47 |
| Msa0103060 | Msa0240720 | 0.810377 | 1.188037e-50 | -8.615850e-47 |
| Msa0105420 | Msa0240720 | 0.800003 | 1.766930e-48 | -8.615850e-47 |
| Msa0125230 | Msa0240720 | 0.801214 | 1.000579e-48 | -8.615850e-47 |
| Msa0194570 | Msa0240720 | 0.813102 | 3.033128e-51 | -8.615850e-47 |
| Msa0213650 | Msa0240720 | 0.825010 | 5.915999e-54 | -8.615850e-47 |
| Msa0226800 | Msa0240720 | 0.817648 | 2.956515e-52 | -8.615850e-47 |
| Msa0227490 | Msa0240720 | 0.819396 | 1.187552e-52 | -8.615850e-47 |
| Msa0227500 | Msa0240720 | 0.811711 | 6.107026e-51 | -8.615850e-47 |
| Msa0240720 | Msa0253980 | 0.807812 | 4.209497e-50 | -8.615850e-47 |
| Msa0240720 | Msa0281570 | 0.812899 | 3.361052e-51 | -8.615850e-47 |
| Msa0240720 | Msa0286790 | 0.818935 | 1.511896e-52 | -8.615850e-47 |
| Msa0240720 | Msa0313990 | 0.819849 | 9.357224e-53 | -8.615850e-47 |
| Msa0240720 | Msa0314790 | 0.804281 | 2.328882e-49 | -8.615850e-47 |
| Msa0240720 | Msa0320540 | 0.805329 | 1.407203e-49 | -8.615850e-47 |
| Msa0240720 | Msa0331140 | 0.805033 | 1.622592e-49 | -8.615850e-47 |
| Msa0240720 | Msa0336270 | 0.814312 | 1.642904e-51 | -8.615850e-47 |
| Msa0240720 | Msa0344070 | 0.817166 | 3.796386e-52 | -8.615850e-47 |
| Msa0240720 | Msa0365150 | 0.812166 | 4.861732e-51 | -8.615850e-47 |
| Msa0240720 | Msa0413740 | 0.807403 | 5.141121e-50 | -8.615850e-47 |
| Msa0240720 | Msa0427050 | 0.802287 | 6.027933e-49 | -8.615850e-47 |
| Msa0240720 | Msa0466100 | 0.806270 | 8.924801e-50 | -8.615850e-47 |
| Msa0240720 | Msa0505390 | 0.804697 | 1.907633e-49 | -8.615850e-47 |
| Msa0240720 | Msa0535450 | 0.803999 | 2.666542e-49 | -8.615850e-47 |
| Msa0240720 | Msa0553520 | 0.809568 | 1.774271e-50 | -8.615850e-47 |
| Msa0240720 | Msa0574170 | 0.821217 | 4.540090e-53 | -8.615850e-47 |
| Msa0240720 | Msa0606060 | 0.820103 | 8.187460e-53 | -8.615850e-47 |
| Msa0240720 | Msa0607280 | 0.804510 | 2.086664e-49 | -8.615850e-47 |
| Msa0240720 | Msa0619330 | 0.804854 | 1.768478e-49 | -8.615850e-47 |
| Msa0240720 | Msa0622390 | 0.833373 | 5.536164e-56 | -8.615850e-47 |
| Msa0240720 | Msa0626230 | 0.802535 | 5.358418e-49 | -8.615850e-47 |
| Msa0240720 | Msa0626890 | 0.831325 | 1.779378e-55 | -8.615850e-47 |
| Msa0240720 | Msa0653710 | 0.809882 | 1.518639e-50 | -8.615850e-47 |
| Msa0240720 | Msa0686610 | 0.819954 | 8.853883e-53 | -8.615850e-47 |
| Msa0240720 | Msa0698760 | 0.815553 | 8.715879e-52 | -8.615850e-47 |
| Msa0240720 | Msa0698900 | 0.804798 | 1.817048e-49 | -8.615850e-47 |
| Msa0240720 | Msa0702070 | 0.817127 | 3.873400e-52 | -8.615850e-47 |
| Msa0240720 | Msa0702120 | 0.803560 | 3.288645e-49 | -8.615850e-47 |
| Msa0240720 | Msa0740420 | 0.801557 | 8.510894e-49 | -8.615850e-47 |
| Msa0240720 | Msa0804930 | 0.819395 | 1.187705e-52 | -8.615850e-47 |
| Msa0240720 | Msa0907700 | 0.801619 | 8.268605e-49 | -8.615850e-47 |
| Msa0240720 | Msa1032350 | 0.805492 | 1.300648e-49 | -8.615850e-47 |
| Msa0240720 | Msa1089530 | 0.803550 | 3.303914e-49 | -8.615850e-47 |
| Msa0240720 | Msa1130650 | 0.803638 | 3.168945e-49 | -8.615850e-47 |
| Msa0240720 | Msa1210640 | 0.814106 | 1.823733e-51 | -8.615850e-47 |
| Msa0240720 | Msa1226600 | 0.800906 | 1.156890e-48 | -8.615850e-47 |
| Msa0240720 | Msa1299160 | 0.818876 | 1.559097e-52 | -8.615850e-47 |
| Msa0240720 | Msa1323060 | 0.804936 | 1.700407e-49 | -8.615850e-47 |
| Msa0240720 | Msa1325980 | 0.801814 | 7.539072e-49 | -8.615850e-47 |
| Msa0240720 | Msa1375630 | 0.805648 | 1.205875e-49 | -8.615850e-47 |
| Msa0240720 | Msa1392680 | 0.824916 | 6.228394e-54 | -8.615850e-47 |
| Msa0240720 | Msa1435470 | 0.807384 | 5.190065e-50 | -8.615850e-47 |
| Msa0240720 | Msa1458920 | 0.802441 | 5.602499e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0240720 | MtrunA17_Chr2g0291731 | 95.595 | 908 | 33 | 3 | 1 | 902 | 1 | 907 | 0.0 | 1639 |
| Msa0240720 | MtrunA17_Chr4g0043451 | 53.815 | 249 | 94 | 5 | 38 | 269 | 76 | 320 | 1.68e-65 | 223 |
| Msa0240720 | MtrunA17_Chr1g0196911 | 31.679 | 524 | 345 | 9 | 375 | 894 | 622 | 1136 | 3.87e-58 | 217 |
| Msa0240720 | MtrunA17_Chr1g0196911 | 24.138 | 261 | 157 | 6 | 64 | 286 | 7 | 264 | 7.24e-14 | 76.3 |
| Msa0240720 | MtrunA17_Chr8g0390311 | 26.733 | 505 | 340 | 12 | 413 | 907 | 513 | 997 | 2.07e-37 | 152 |
| Msa0240720 | MtrunA17_Chr7g0214471 | 33.754 | 317 | 173 | 10 | 25 | 317 | 162 | 465 | 2.51e-37 | 151 |
| Msa0240720 | MtrunA17_Chr7g0214471 | 29.619 | 341 | 231 | 4 | 565 | 899 | 695 | 1032 | 3.31e-33 | 138 |
| Msa0240720 | MtrunA17_Chr2g0295801 | 21.522 | 460 | 334 | 12 | 452 | 902 | 371 | 812 | 4.79e-14 | 76.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0240720 | AT3G06880.2 | 22.152 | 474 | 338 | 13 | 447 | 906 | 474 | 930 | 1.13e-11 | 69.7 |
| Msa0240720 | AT3G06880.1 | 22.152 | 474 | 338 | 13 | 447 | 906 | 474 | 930 | 1.17e-11 | 69.7 |
| Msa0240720 | AT3G06880.3 | 22.152 | 474 | 338 | 13 | 447 | 906 | 474 | 930 | 1.21e-11 | 69.3 |
| Msa0240720 | AT3G06880.4 | 22.152 | 474 | 338 | 13 | 447 | 906 | 474 | 930 | 1.40e-11 | 69.3 |
| Msa0240720 | AT3G06880.5 | 22.152 | 474 | 338 | 13 | 447 | 906 | 474 | 930 | 1.41e-11 | 69.3 |
Find 113 sgRNAs with CRISPR-Local
Find 190 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCTTCTTCATCTTAAAATT+TGG | 0.147104 | 2_2:+16098973 | Msa0240720:CDS |
| TGAATTGATTATATCAATTT+TGG | 0.173331 | 2_2:+16100277 | Msa0240720:CDS |
| CTTATCTTCTTCCTGATCTT+TGG | 0.195909 | 2_2:+16098931 | Msa0240720:CDS |
| AGAATTCAAAGAAGAAATTT+TGG | 0.203469 | 2_2:-16098781 | None:intergenic |
| ATACTTAGAGTGTTGGAATT+TGG | 0.207564 | 2_2:+16100476 | Msa0240720:CDS |
| TTTGCTTTGACTTACAAATT+TGG | 0.213908 | 2_2:-16099251 | None:intergenic |
| AGATAAGTTCTAGCCAAATT+TGG | 0.217209 | 2_2:-16098915 | None:intergenic |
| ATTATTGATGCTTGATCTTA+TGG | 0.225685 | 2_2:+16101075 | Msa0240720:CDS |
| GACTTACAAATTTGGATTAA+TGG | 0.229727 | 2_2:-16099243 | None:intergenic |
| GAGCTTTATTCTTATCAATT+TGG | 0.253269 | 2_2:-16099950 | None:intergenic |
| TTGCTTGAACTCATTGTTCT+TGG | 0.257256 | 2_2:+16100770 | Msa0240720:CDS |
| TTATCTTCTTCCTGATCTTT+GGG | 0.276447 | 2_2:+16098932 | Msa0240720:CDS |
| GCAAAAGCTCTACTCTTATT+AGG | 0.278041 | 2_2:+16101460 | Msa0240720:CDS |
| AATCTTCTAAGCAAAATTCT+TGG | 0.282998 | 2_2:-16101546 | None:intergenic |
| GAAGAAGAAGAAGATCCTTT+TGG | 0.300302 | 2_2:-16098393 | None:intergenic |
| TCTTAGGAATTTCAAAATCT+TGG | 0.300741 | 2_2:-16100954 | None:intergenic |
| GCAACTAAAGGCCTTTCTTC+TGG | 0.313805 | 2_2:-16101046 | None:intergenic |
| TTGAATTGCTTCACCTTGAT+AGG | 0.315513 | 2_2:+16100834 | Msa0240720:CDS |
| TTCACATTCGGTTAGAATAT+CGG | 0.330324 | 2_2:-16100120 | None:intergenic |
| AAAGAAGACAGAAAATGTTT+TGG | 0.336847 | 2_2:+16099915 | Msa0240720:CDS |
| ACCAACCACTGCTGTAATAA+TGG | 0.339624 | 2_2:-16098508 | None:intergenic |
| ATCCATCTTTGAGTCCTCTT+AGG | 0.341897 | 2_2:-16100970 | None:intergenic |
| AACAGATACAAGGCAGTGTT+TGG | 0.362180 | 2_2:+16099481 | Msa0240720:intron |
| TTATAGATGCAGTTCGGTTC+AGG | 0.367291 | 2_2:+16099591 | Msa0240720:CDS |
| CAAGTCTTACAACTATTTCA+TGG | 0.367986 | 2_2:+16102172 | Msa0240720:CDS |
| CTTCTTCATCTCAGTTCAAA+AGG | 0.368201 | 2_2:+16098415 | Msa0240720:CDS |
| TGTAGTCCAAGGTATCTTAG+AGG | 0.373140 | 2_2:+16100223 | Msa0240720:CDS |
| GACCTAAAACTTGGCCTTGA+TGG | 0.374047 | 2_2:-16099179 | None:intergenic |
| CAAAGCTTGGTTGAACTCTC+CGG | 0.377724 | 2_2:+16100163 | Msa0240720:CDS |
| ATGTAAAAGATGATAATTTC+AGG | 0.378822 | 2_2:+16098556 | Msa0240720:CDS |
| ACTAGTCTTGGTGACCAAAC+TGG | 0.387019 | 2_2:+16099529 | Msa0240720:CDS |
| CATCAAAACCATTGAGAAGT+TGG | 0.390903 | 2_2:-16100565 | None:intergenic |
| AAACAATGGCTTAAAGTTAG+TGG | 0.392361 | 2_2:+16099122 | Msa0240720:CDS |
| CTTCTTGATGACCTAAAACT+TGG | 0.393685 | 2_2:-16099188 | None:intergenic |
| ATTTCCGCTGCTCTTGTTTG+AGG | 0.403248 | 2_2:-16099504 | None:intergenic |
| GAATAAAGCTCACGAAAGAT+TGG | 0.417829 | 2_2:+16099962 | Msa0240720:CDS |
| CAATTGTTCCCTTGCCATCA+AGG | 0.425329 | 2_2:+16099165 | Msa0240720:CDS |
| TTTCTTCATTTACCTTCAAA+AGG | 0.429837 | 2_2:+16101018 | Msa0240720:CDS |
| CTTTCTTCATATATTTGTAA+TGG | 0.435120 | 2_2:+16098369 | Msa0240720:CDS |
| AACAAATGCTCCCAAAGATC+AGG | 0.441719 | 2_2:-16098942 | None:intergenic |
| TCTTCTGACACAAGAGACTT+AGG | 0.442706 | 2_2:-16098465 | None:intergenic |
| TTCGCTTCGTTACCAAAGCT+TGG | 0.444629 | 2_2:+16100150 | Msa0240720:CDS |
| AATAATATCATTGCAACTAA+AGG | 0.444863 | 2_2:-16101058 | None:intergenic |
| AACAAATGATATCATCAGAA+TGG | 0.448456 | 2_2:+16100444 | Msa0240720:CDS |
| CGGAGAGTTCAACCAAGCTT+TGG | 0.449630 | 2_2:-16100162 | None:intergenic |
| TATATTTGTAATGGTCCAAA+AGG | 0.449883 | 2_2:+16098378 | Msa0240720:CDS |
| CTTGATGGCAAGGGAACAAT+TGG | 0.456206 | 2_2:-16099164 | None:intergenic |
| AGATACAAAGTTGCCACAAA+TGG | 0.457884 | 2_2:+16102221 | Msa0240720:CDS |
| GCAGTGGTTGGTATACTTAG+TGG | 0.460876 | 2_2:+16098519 | Msa0240720:CDS |
| TTGGTGTCAAAATTCCAGTT+TGG | 0.463848 | 2_2:-16099543 | None:intergenic |
| GGAGGTCATTTCTCTTATGC+AGG | 0.468152 | 2_2:+16101481 | Msa0240720:CDS |
| GCTTGTGTCTTGTTCAAAAG+TGG | 0.472563 | 2_2:+16102084 | Msa0240720:CDS |
| ATCTTGGACCAACTTCTCAA+TGG | 0.473295 | 2_2:+16100557 | Msa0240720:CDS |
| ACTTTGTATCTTCAAGTAAG+TGG | 0.475247 | 2_2:-16102209 | None:intergenic |
| ACAAATGATATCATCAGAAT+GGG | 0.481504 | 2_2:+16100445 | Msa0240720:CDS |
| AAGATTGAGAAAGCCATTTG+TGG | 0.485508 | 2_2:-16102234 | None:intergenic |
| TTGAACTCATTGTTCTTGGA+AGG | 0.486845 | 2_2:+16100774 | Msa0240720:CDS |
| ATATATGAAGAAAGTGGTTG+TGG | 0.488206 | 2_2:-16098360 | None:intergenic |
| AGGAAGAAGAAGGTGAGAGT+TGG | 0.495763 | 2_2:+16102049 | Msa0240720:intron |
| ATAGCTTCTACAGCTTCCTT+CGG | 0.500255 | 2_2:-16100720 | None:intergenic |
| CAGCGGAAATCTACTAGTCT+TGG | 0.501087 | 2_2:+16099517 | Msa0240720:CDS |
| GCCATTGATACTTAGAGTGT+TGG | 0.501193 | 2_2:+16100469 | Msa0240720:CDS |
| AAAAGGCTCCACCAGAAGAA+AGG | 0.502827 | 2_2:+16101035 | Msa0240720:CDS |
| TCCAACACTCTAAGTATCAA+TGG | 0.503412 | 2_2:-16100470 | None:intergenic |
| AGACTTGCACGTGCTAAGCT+TGG | 0.508638 | 2_2:-16102156 | None:intergenic |
| ATAAAACCTCTAAGATACCT+TGG | 0.511591 | 2_2:-16100229 | None:intergenic |
| TATAATATGGAGGAAGAAGA+AGG | 0.511935 | 2_2:+16102039 | Msa0240720:intron |
| GGTATACTTAGTGGTTACAT+AGG | 0.515410 | 2_2:+16098528 | Msa0240720:CDS |
| AAAACAACAATTTCCTTGCA+AGG | 0.519404 | 2_2:-16101577 | None:intergenic |
| AAAACTTGGCCTTGATGGCA+AGG | 0.520335 | 2_2:-16099174 | None:intergenic |
| ATGTAAAATGCTGCAACTTG+TGG | 0.520666 | 2_2:-16100536 | None:intergenic |
| TTCCTAAGAGGACTCAAAGA+TGG | 0.520706 | 2_2:+16100968 | Msa0240720:CDS |
| GCAAGACAAGTTCTTTCACT+TGG | 0.527747 | 2_2:+16100608 | Msa0240720:CDS |
| AGACAAGTTCTTTCACTTGG+TGG | 0.527841 | 2_2:+16100611 | Msa0240720:CDS |
| TGCTAAGCTTGGAATGCCAT+TGG | 0.534178 | 2_2:-16102145 | None:intergenic |
| TTCTTCATCTCAGTTCAAAA+GGG | 0.535117 | 2_2:+16098416 | Msa0240720:CDS |
| GCGAATAGCGAATTCACATT+CGG | 0.536853 | 2_2:-16100132 | None:intergenic |
| CTCATCAAAAGAATTGATGA+TGG | 0.539338 | 2_2:+16100644 | Msa0240720:CDS |
| AGATGATTATAGATGCAGTT+CGG | 0.545423 | 2_2:+16099585 | Msa0240720:CDS |
| TCCATTATTACAGCAGTGGT+TGG | 0.546466 | 2_2:+16098507 | Msa0240720:CDS |
| AGCTTCCATTATTACAGCAG+TGG | 0.546722 | 2_2:+16098503 | Msa0240720:CDS |
| TGATGGAGAGATTCATGAGA+AGG | 0.547332 | 2_2:+16100661 | Msa0240720:CDS |
| AAAGCTTGGTTGAACTCTCC+GGG | 0.547863 | 2_2:+16100164 | Msa0240720:CDS |
| GCAGGAAGATAAATATCTCA+AGG | 0.551167 | 2_2:+16101351 | Msa0240720:intron |
| AGATTCATTTCCTCCTTGCA+AGG | 0.560069 | 2_2:+16101564 | Msa0240720:CDS |
| TTACAAATATATGAAGAAAG+TGG | 0.563092 | 2_2:-16098366 | None:intergenic |
| GATAAACTGATAGAAGATCA+AGG | 0.564437 | 2_2:+16098702 | Msa0240720:CDS |
| GTCAATGCTTCTTCAATGAG+AGG | 0.568971 | 2_2:-16100191 | None:intergenic |
| ATATAGAGAAGAAGCTATTG+AGG | 0.570152 | 2_2:+16101381 | Msa0240720:CDS |
| CTCACAAATAGTTCTAGTTG+TGG | 0.570468 | 2_2:-16100353 | None:intergenic |
| TCATCTCAGTTCAAAAGGGT+AGG | 0.576116 | 2_2:+16098420 | Msa0240720:CDS |
| TAAGAGGACTCAAAGATGGA+TGG | 0.576526 | 2_2:+16100972 | Msa0240720:CDS |
| GGCAAGGGAACAATTGGAAG+AGG | 0.578516 | 2_2:-16099158 | None:intergenic |
| TGTGTCAGAAGATTCAAGAA+TGG | 0.580254 | 2_2:+16098476 | Msa0240720:CDS |
| TTGCTATGTATTATAAACAA+TGG | 0.580498 | 2_2:+16099108 | Msa0240720:CDS |
| TGATGAGATCTTTGTGAACA+TGG | 0.581215 | 2_2:+16098659 | Msa0240720:CDS |
| TCGTGTTGCATTCGAGCCGA+AGG | 0.583812 | 2_2:+16100704 | Msa0240720:CDS |
| CTTGCAAATTCTATAGCCAA+TGG | 0.592942 | 2_2:+16102129 | Msa0240720:CDS |
| ACTAAAGGCCTTTCTTCTGG+TGG | 0.595306 | 2_2:-16101043 | None:intergenic |
| GGAAGGAAACAAAATTCAAG+TGG | 0.595509 | 2_2:+16100791 | Msa0240720:CDS |
| TTATGCAGGAGAATCACTGA+TGG | 0.595591 | 2_2:+16101495 | Msa0240720:CDS |
| TCTTTATCTATCAAAACCAA+TGG | 0.600134 | 2_2:+16100418 | Msa0240720:CDS |
| ACACAATCTATTGTAGTCCA+AGG | 0.607717 | 2_2:+16100212 | Msa0240720:CDS |
| AAACTTGGCCTTGATGGCAA+GGG | 0.616412 | 2_2:-16099173 | None:intergenic |
| AAAGCTCTACTCTTATTAGG+AGG | 0.624106 | 2_2:+16101463 | Msa0240720:CDS |
| GGACTCAAAGATGGATGGAG+TGG | 0.630766 | 2_2:+16100977 | Msa0240720:CDS |
| TTGTATCTTCAAGTAAGTGG+AGG | 0.632773 | 2_2:-16102206 | None:intergenic |
| CAGGAAGATAAATATCTCAA+GGG | 0.634071 | 2_2:+16101352 | Msa0240720:intron |
| GTCACTTGAAAGAACACTTG+AGG | 0.640258 | 2_2:-16100066 | None:intergenic |
| TCTTCAATGAGAGGATCACC+CGG | 0.650331 | 2_2:-16100182 | None:intergenic |
| TTCAATGATTGTAGCAACTG+TGG | 0.670853 | 2_2:-16102261 | None:intergenic |
| ACAACAATTTCCTTGCAAGG+AGG | 0.676080 | 2_2:-16101574 | None:intergenic |
| TTGGCCTCAAACAAGAGCAG+CGG | 0.682782 | 2_2:+16099500 | Msa0240720:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTCAAATTTATATATGTTAA+GGG | + | chr2_2:16099628-16099647 | Msa0240720:intron | 10.0% |
| !!! | GACTATTTTTTTTATAAAAT+TGG | + | chr2_2:16101756-16101775 | Msa0240720:intron | 10.0% |
| !!! | AAGAAACTTTATTTTTTTTA+GGG | + | chr2_2:16101929-16101948 | Msa0240720:intron | 10.0% |
| !! | ATTTGTATATCATAAAAAGA+TGG | - | chr2_2:16099277-16099296 | None:intergenic | 15.0% |
| !! | AAGCAAAAAAATATATTTAC+CGG | + | chr2_2:16099331-16099350 | Msa0240720:intron | 15.0% |
| !!! | TATTATGTGCTTTAAAATTT+TGG | + | chr2_2:16099448-16099467 | Msa0240720:intron | 15.0% |
| !! | CTTCAAATTTATATATGTTA+AGG | + | chr2_2:16099627-16099646 | Msa0240720:intron | 15.0% |
| !!! | TGAATTGATTATATCAATTT+TGG | + | chr2_2:16100277-16100296 | Msa0240720:CDS | 15.0% |
| !!! | CATTGTATATCATTTTTTTT+TGG | - | chr2_2:16101707-16101726 | None:intergenic | 15.0% |
| !!! | CAAGAAACTTTATTTTTTTT+AGG | + | chr2_2:16101928-16101947 | Msa0240720:intron | 15.0% |
| !!! | AGAAACTTTATTTTTTTTAG+GGG | + | chr2_2:16101930-16101949 | Msa0240720:intron | 15.0% |
| !! | ATATATGGTTGATTATAATA+TGG | + | chr2_2:16102026-16102045 | Msa0240720:intron | 15.0% |
| !! | TTACAAATATATGAAGAAAG+TGG | - | chr2_2:16098369-16098388 | None:intergenic | 20.0% |
| !! | CTTTCTTCATATATTTGTAA+TGG | + | chr2_2:16098369-16098388 | Msa0240720:CDS | 20.0% |
| !! | ATGTAAAAGATGATAATTTC+AGG | + | chr2_2:16098556-16098575 | Msa0240720:CDS | 20.0% |
| !! | AGAAAAAGAAGAAAAGATTT+AGG | + | chr2_2:16098627-16098646 | Msa0240720:CDS | 20.0% |
| !!! | AGAATTCAAAGAAGAAATTT+TGG | - | chr2_2:16098784-16098803 | None:intergenic | 20.0% |
| !! | ATCTTCTTCATCTTAAAATT+TGG | + | chr2_2:16098973-16098992 | Msa0240720:CDS | 20.0% |
| !! | CAAAGTTTACAATGAAAAAA+TGG | + | chr2_2:16099067-16099086 | Msa0240720:CDS | 20.0% |
| !! | TTGCTATGTATTATAAACAA+TGG | + | chr2_2:16099108-16099127 | Msa0240720:CDS | 20.0% |
| !! | GATATACAAATATGTGTATA+TGG | + | chr2_2:16099286-16099305 | Msa0240720:intron | 20.0% |
| !!! | AATATAGTTGATTTTTGACA+TGG | - | chr2_2:16100030-16100049 | None:intergenic | 20.0% |
| !!! | TTTTGATGAAGATAAGAATT+TGG | + | chr2_2:16100580-16100599 | Msa0240720:CDS | 20.0% |
| !! | AATAATATCATTGCAACTAA+AGG | - | chr2_2:16101061-16101080 | None:intergenic | 20.0% |
| !! | AACATTTGTGTATAAAATGT+AGG | - | chr2_2:16101202-16101221 | None:intergenic | 20.0% |
| !! | TTGTATCTTACAAAAAATTC+AGG | + | chr2_2:16102330-16102349 | Msa0240720:CDS | 20.0% |
| ! | ACACAATCATAAAAAACACA+TGG | + | chr2_2:16098314-16098333 | Msa0240720:exon | 25.0% |
| ! | TATATTTGTAATGGTCCAAA+AGG | + | chr2_2:16098378-16098397 | Msa0240720:CDS | 25.0% |
| !!! | AGAGAAATGCAATTCTTTTT+TGG | + | chr2_2:16098590-16098609 | Msa0240720:CDS | 25.0% |
| !!! | GTTTTGTTATTCTCCAAATT+TGG | + | chr2_2:16098902-16098921 | Msa0240720:CDS | 25.0% |
| !!! | ATTTTAAGATGAAGAAGATG+AGG | - | chr2_2:16098972-16098991 | None:intergenic | 25.0% |
| ! | TACAATGAAAAAATGGATAG+TGG | + | chr2_2:16099074-16099093 | Msa0240720:CDS | 25.0% |
| ! | GACTTACAAATTTGGATTAA+TGG | - | chr2_2:16099246-16099265 | None:intergenic | 25.0% |
| !! | TTTGCTTTGACTTACAAATT+TGG | - | chr2_2:16099254-16099273 | None:intergenic | 25.0% |
| ! | GCAAAAAAAGTAAATGTATC+TGG | - | chr2_2:16099400-16099419 | None:intergenic | 25.0% |
| !!! | TTTTTTTTCCAACAGATACA+AGG | + | chr2_2:16099471-16099490 | Msa0240720:intron | 25.0% |
| ! | ACAGATATGTAAATCCAAAT+AGG | - | chr2_2:16099654-16099673 | None:intergenic | 25.0% |
| !! | AAAGAAGACAGAAAATGTTT+TGG | + | chr2_2:16099915-16099934 | Msa0240720:CDS | 25.0% |
| !!! | GAGCTTTATTCTTATCAATT+TGG | - | chr2_2:16099953-16099972 | None:intergenic | 25.0% |
| !! | TTTTGGCAGAATTAATAACT+AGG | + | chr2_2:16100294-16100313 | Msa0240720:CDS | 25.0% |
| ! | TCTTTATCTATCAAAACCAA+TGG | + | chr2_2:16100418-16100437 | Msa0240720:CDS | 25.0% |
| ! | AACAAATGATATCATCAGAA+TGG | + | chr2_2:16100444-16100463 | Msa0240720:CDS | 25.0% |
| ! | ACAAATGATATCATCAGAAT+GGG | + | chr2_2:16100445-16100464 | Msa0240720:CDS | 25.0% |
| !! | TAAAAAGTACATACCTATCA+AGG | - | chr2_2:16100850-16100869 | None:intergenic | 25.0% |
| ! | TCTTAGGAATTTCAAAATCT+TGG | - | chr2_2:16100957-16100976 | None:intergenic | 25.0% |
| !!! | AAGATTTTGAAATTCCTAAG+AGG | + | chr2_2:16100956-16100975 | Msa0240720:CDS | 25.0% |
| ! | TTTCTTCATTTACCTTCAAA+AGG | + | chr2_2:16101018-16101037 | Msa0240720:CDS | 25.0% |
| ! | ATTATTGATGCTTGATCTTA+TGG | + | chr2_2:16101075-16101094 | Msa0240720:CDS | 25.0% |
| ! | ATTTGTGTATAAAATGTAGG+AGG | - | chr2_2:16101199-16101218 | None:intergenic | 25.0% |
| ! | AATCTTCTAAGCAAAATTCT+TGG | - | chr2_2:16101549-16101568 | None:intergenic | 25.0% |
| !!! | TGTTTTTGATTCAATTCACA+AGG | + | chr2_2:16101594-16101613 | Msa0240720:CDS | 25.0% |
| !! | ATTTTATAATGATGTCCGAT+AGG | + | chr2_2:16101821-16101840 | Msa0240720:intron | 25.0% |
| !!! | AAACAAGTTTCTAGTATTAG+TGG | + | chr2_2:16101963-16101982 | Msa0240720:intron | 25.0% |
| ! | TATGGTTGATTATAATATGG+AGG | + | chr2_2:16102029-16102048 | Msa0240720:intron | 25.0% |
| ATATATGAAGAAAGTGGTTG+TGG | - | chr2_2:16098363-16098382 | None:intergenic | 30.0% | |
| TTCTTCATCTCAGTTCAAAA+GGG | + | chr2_2:16098416-16098435 | Msa0240720:CDS | 30.0% | |
| GATAAACTGATAGAAGATCA+AGG | + | chr2_2:16098702-16098721 | Msa0240720:CDS | 30.0% | |
| ! | AGATAAGTTCTAGCCAAATT+TGG | - | chr2_2:16098918-16098937 | None:intergenic | 30.0% |
| TTATCTTCTTCCTGATCTTT+GGG | + | chr2_2:16098932-16098951 | Msa0240720:CDS | 30.0% | |
| AAACAATGGCTTAAAGTTAG+TGG | + | chr2_2:16099122-16099141 | Msa0240720:CDS | 30.0% | |
| TGCTTATATTTCATTCCAGA+GGG | - | chr2_2:16099316-16099335 | None:intergenic | 30.0% | |
| TTGCTTATATTTCATTCCAG+AGG | - | chr2_2:16099317-16099336 | None:intergenic | 30.0% | |
| TAAAGTACATGTATCTTGTC+CGG | - | chr2_2:16099353-16099372 | None:intergenic | 30.0% | |
| AGATGATTATAGATGCAGTT+CGG | + | chr2_2:16099585-16099604 | Msa0240720:CDS | 30.0% | |
| ATATATGTTAAGGGCCTATT+TGG | + | chr2_2:16099637-16099656 | Msa0240720:intron | 30.0% | |
| ACAACTTATAGACATGTCAT+AGG | - | chr2_2:16099699-16099718 | None:intergenic | 30.0% | |
| TCATATAAGTGCTTATGTGT+AGG | - | chr2_2:16099824-16099843 | None:intergenic | 30.0% | |
| ! | AAAGATTGGACTATTTTCAG+TGG | + | chr2_2:16099976-16099995 | Msa0240720:CDS | 30.0% |
| ! | ATTTTTGACATGGTTTCTGT+TGG | - | chr2_2:16100020-16100039 | None:intergenic | 30.0% |
| TTCACATTCGGTTAGAATAT+CGG | - | chr2_2:16100123-16100142 | None:intergenic | 30.0% | |
| !! | ATAAAACCTCTAAGATACCT+TGG | - | chr2_2:16100232-16100251 | None:intergenic | 30.0% |
| !!! | AAGCACTAGTCTTTTTCTTA+AGG | + | chr2_2:16100385-16100404 | Msa0240720:CDS | 30.0% |
| !!! | GATATCATTTGTTTTGCCAT+TGG | - | chr2_2:16100437-16100456 | None:intergenic | 30.0% |
| !! | ATACTTAGAGTGTTGGAATT+TGG | + | chr2_2:16100476-16100495 | Msa0240720:CDS | 30.0% |
| CTCATCAAAAGAATTGATGA+TGG | + | chr2_2:16100644-16100663 | Msa0240720:CDS | 30.0% | |
| TCAACTTATAATTGCATGCA+TGG | + | chr2_2:16101106-16101125 | Msa0240720:intron | 30.0% | |
| AATTGCATGCATGGAATTAT+TGG | + | chr2_2:16101115-16101134 | Msa0240720:intron | 30.0% | |
| CACAAATGTTAGTAAGTTAG+TGG | + | chr2_2:16101212-16101231 | Msa0240720:intron | 30.0% | |
| ! | TAGTGGTTATGTTAGTTTCT+AGG | + | chr2_2:16101229-16101248 | Msa0240720:intron | 30.0% |
| ! | AGTGGTTATGTTAGTTTCTA+GGG | + | chr2_2:16101230-16101249 | Msa0240720:intron | 30.0% |
| !! | TTATGTTAGTTTCTAGGGTT+CGG | + | chr2_2:16101235-16101254 | Msa0240720:intron | 30.0% |
| CAGGAAGATAAATATCTCAA+GGG | + | chr2_2:16101352-16101371 | Msa0240720:intron | 30.0% | |
| ATATAGAGAAGAAGCTATTG+AGG | + | chr2_2:16101381-16101400 | Msa0240720:CDS | 30.0% | |
| !! | AATTTGCTTTTGCAAAAAGC+TGG | + | chr2_2:16101520-16101539 | Msa0240720:CDS | 30.0% |
| AAAACAACAATTTCCTTGCA+AGG | - | chr2_2:16101580-16101599 | None:intergenic | 30.0% | |
| TATAATATGGAGGAAGAAGA+AGG | + | chr2_2:16102039-16102058 | Msa0240720:intron | 30.0% | |
| CAAGTCTTACAACTATTTCA+TGG | + | chr2_2:16102172-16102191 | Msa0240720:CDS | 30.0% | |
| ACTTTGTATCTTCAAGTAAG+TGG | - | chr2_2:16102212-16102231 | None:intergenic | 30.0% | |
| !!! | GATTTTGAAGCTTGAAGAAG+AGG | - | chr2_2:16098283-16098302 | None:intergenic | 35.0% |
| ! | GAAGAAGAAGAAGATCCTTT+TGG | - | chr2_2:16098396-16098415 | None:intergenic | 35.0% |
| CTTCTTCATCTCAGTTCAAA+AGG | + | chr2_2:16098415-16098434 | Msa0240720:CDS | 35.0% | |
| TGTGTCAGAAGATTCAAGAA+TGG | + | chr2_2:16098476-16098495 | Msa0240720:CDS | 35.0% | |
| GGTATACTTAGTGGTTACAT+AGG | + | chr2_2:16098528-16098547 | Msa0240720:CDS | 35.0% | |
| TGATGAGATCTTTGTGAACA+TGG | + | chr2_2:16098659-16098678 | Msa0240720:CDS | 35.0% | |
| CTTATCTTCTTCCTGATCTT+TGG | + | chr2_2:16098931-16098950 | Msa0240720:CDS | 35.0% | |
| ! | CTTCTTGATGACCTAAAACT+TGG | - | chr2_2:16099191-16099210 | None:intergenic | 35.0% |
| ! | GTATCTGGAACAAATTCTTC+AGG | - | chr2_2:16099385-16099404 | None:intergenic | 35.0% |
| !! | TTGGTGTCAAAATTCCAGTT+TGG | - | chr2_2:16099546-16099565 | None:intergenic | 35.0% |
| ! | TATCTGTTTGTCAGAGCTTT+TGG | + | chr2_2:16099667-16099686 | Msa0240720:intron | 35.0% |
| GAATAAAGCTCACGAAAGAT+TGG | + | chr2_2:16099962-16099981 | Msa0240720:CDS | 35.0% | |
| ACACAATCTATTGTAGTCCA+AGG | + | chr2_2:16100212-16100231 | Msa0240720:CDS | 35.0% | |
| !! | CTCACAAATAGTTCTAGTTG+TGG | - | chr2_2:16100356-16100375 | None:intergenic | 35.0% |
| TCCAACACTCTAAGTATCAA+TGG | - | chr2_2:16100473-16100492 | None:intergenic | 35.0% | |
| ATGTAAAATGCTGCAACTTG+TGG | - | chr2_2:16100539-16100558 | None:intergenic | 35.0% | |
| ! | AGTTGCAGCATTTTACATCT+TGG | + | chr2_2:16100541-16100560 | Msa0240720:CDS | 35.0% |
| CATCAAAACCATTGAGAAGT+TGG | - | chr2_2:16100568-16100587 | None:intergenic | 35.0% | |
| TTGCTTGAACTCATTGTTCT+TGG | + | chr2_2:16100770-16100789 | Msa0240720:CDS | 35.0% | |
| TTGAACTCATTGTTCTTGGA+AGG | + | chr2_2:16100774-16100793 | Msa0240720:CDS | 35.0% | |
| GGAAGGAAACAAAATTCAAG+TGG | + | chr2_2:16100791-16100810 | Msa0240720:CDS | 35.0% | |
| TTGAATTGCTTCACCTTGAT+AGG | + | chr2_2:16100834-16100853 | Msa0240720:CDS | 35.0% | |
| TAAAGAGTTTCAAGCATGAC+CGG | - | chr2_2:16101272-16101291 | None:intergenic | 35.0% | |
| GCAGGAAGATAAATATCTCA+AGG | + | chr2_2:16101351-16101370 | Msa0240720:intron | 35.0% | |
| GCAAAAGCTCTACTCTTATT+AGG | + | chr2_2:16101460-16101479 | Msa0240720:CDS | 35.0% | |
| AAAGCTCTACTCTTATTAGG+AGG | + | chr2_2:16101463-16101482 | Msa0240720:CDS | 35.0% | |
| TCAATTCACAAGGTAAGCTT+TGG | + | chr2_2:16101604-16101623 | Msa0240720:intron | 35.0% | |
| GATTGTGTAACCTCAAAAGA+GGG | - | chr2_2:16101856-16101875 | None:intergenic | 35.0% | |
| TGATTGTGTAACCTCAAAAG+AGG | - | chr2_2:16101857-16101876 | None:intergenic | 35.0% | |
| CTTGCAAATTCTATAGCCAA+TGG | + | chr2_2:16102129-16102148 | Msa0240720:CDS | 35.0% | |
| TTGTATCTTCAAGTAAGTGG+AGG | - | chr2_2:16102209-16102228 | None:intergenic | 35.0% | |
| AGATACAAAGTTGCCACAAA+TGG | + | chr2_2:16102221-16102240 | Msa0240720:CDS | 35.0% | |
| AAGATTGAGAAAGCCATTTG+TGG | - | chr2_2:16102237-16102256 | None:intergenic | 35.0% | |
| TTCAATGATTGTAGCAACTG+TGG | - | chr2_2:16102264-16102283 | None:intergenic | 35.0% | |
| TCATCTCAGTTCAAAAGGGT+AGG | + | chr2_2:16098420-16098439 | Msa0240720:CDS | 40.0% | |
| TCTTCTGACACAAGAGACTT+AGG | - | chr2_2:16098468-16098487 | None:intergenic | 40.0% | |
| AGCTTCCATTATTACAGCAG+TGG | + | chr2_2:16098503-16098522 | Msa0240720:CDS | 40.0% | |
| TCCATTATTACAGCAGTGGT+TGG | + | chr2_2:16098507-16098526 | Msa0240720:CDS | 40.0% | |
| ACCAACCACTGCTGTAATAA+TGG | - | chr2_2:16098511-16098530 | None:intergenic | 40.0% | |
| AACAAATGCTCCCAAAGATC+AGG | - | chr2_2:16098945-16098964 | None:intergenic | 40.0% | |
| AAACACTGCCTTGTATCTGT+TGG | - | chr2_2:16099482-16099501 | None:intergenic | 40.0% | |
| AACAGATACAAGGCAGTGTT+TGG | + | chr2_2:16099481-16099500 | Msa0240720:intron | 40.0% | |
| !! | TGGAATTTTGACACCAAGCA+AGG | + | chr2_2:16099549-16099568 | Msa0240720:CDS | 40.0% |
| !! | GGAATTTTGACACCAAGCAA+GGG | + | chr2_2:16099550-16099569 | Msa0240720:CDS | 40.0% |
| ! | CCATACATTTTTCCCTTGCT+TGG | - | chr2_2:16099565-16099584 | None:intergenic | 40.0% |
| CCAAGCAAGGGAAAAATGTA+TGG | + | chr2_2:16099562-16099581 | Msa0240720:CDS | 40.0% | |
| TTATAGATGCAGTTCGGTTC+AGG | + | chr2_2:16099591-16099610 | Msa0240720:CDS | 40.0% | |
| CTTTCTGTCACAAGTGAGAA+AGG | - | chr2_2:16099899-16099918 | None:intergenic | 40.0% | |
| ! | ATTTTCAGTGGTTGTCTTGC+AGG | + | chr2_2:16099988-16100007 | Msa0240720:CDS | 40.0% |
| GTCACTTGAAAGAACACTTG+AGG | - | chr2_2:16100069-16100088 | None:intergenic | 40.0% | |
| GCGAATAGCGAATTCACATT+CGG | - | chr2_2:16100135-16100154 | None:intergenic | 40.0% | |
| GTCAATGCTTCTTCAATGAG+AGG | - | chr2_2:16100194-16100213 | None:intergenic | 40.0% | |
| ! | TGTAGTCCAAGGTATCTTAG+AGG | + | chr2_2:16100223-16100242 | Msa0240720:CDS | 40.0% |
| GCCATTGATACTTAGAGTGT+TGG | + | chr2_2:16100469-16100488 | Msa0240720:CDS | 40.0% | |
| ATCTTGGACCAACTTCTCAA+TGG | + | chr2_2:16100557-16100576 | Msa0240720:CDS | 40.0% | |
| GCAAGACAAGTTCTTTCACT+TGG | + | chr2_2:16100608-16100627 | Msa0240720:CDS | 40.0% | |
| AGACAAGTTCTTTCACTTGG+TGG | + | chr2_2:16100611-16100630 | Msa0240720:CDS | 40.0% | |
| TGATGGAGAGATTCATGAGA+AGG | + | chr2_2:16100661-16100680 | Msa0240720:CDS | 40.0% | |
| ATAGCTTCTACAGCTTCCTT+CGG | - | chr2_2:16100723-16100742 | None:intergenic | 40.0% | |
| TTCCTAAGAGGACTCAAAGA+TGG | + | chr2_2:16100968-16100987 | Msa0240720:CDS | 40.0% | |
| ATCCATCTTTGAGTCCTCTT+AGG | - | chr2_2:16100973-16100992 | None:intergenic | 40.0% | |
| TAAGAGGACTCAAAGATGGA+TGG | + | chr2_2:16100972-16100991 | Msa0240720:CDS | 40.0% | |
| TTATGCAGGAGAATCACTGA+TGG | + | chr2_2:16101495-16101514 | Msa0240720:CDS | 40.0% | |
| AGATTCATTTCCTCCTTGCA+AGG | + | chr2_2:16101564-16101583 | Msa0240720:CDS | 40.0% | |
| ACAACAATTTCCTTGCAAGG+AGG | - | chr2_2:16101577-16101596 | None:intergenic | 40.0% | |
| AGAGGGAGTTCAAATCCTAT+CGG | - | chr2_2:16101839-16101858 | None:intergenic | 40.0% | |
| ! | GATTTGAACTCCCTCTTTTG+AGG | + | chr2_2:16101843-16101862 | Msa0240720:intron | 40.0% |
| ! | GCTTGTGTCTTGTTCAAAAG+TGG | + | chr2_2:16102084-16102103 | Msa0240720:CDS | 40.0% |
| ! | GCAGTGGTTGGTATACTTAG+TGG | + | chr2_2:16098519-16098538 | Msa0240720:CDS | 45.0% |
| ! | CTTGATGGCAAGGGAACAAT+TGG | - | chr2_2:16099167-16099186 | None:intergenic | 45.0% |
| CAATTGTTCCCTTGCCATCA+AGG | + | chr2_2:16099165-16099184 | Msa0240720:CDS | 45.0% | |
| !! | AAACTTGGCCTTGATGGCAA+GGG | - | chr2_2:16099176-16099195 | None:intergenic | 45.0% |
| !! | AAAACTTGGCCTTGATGGCA+AGG | - | chr2_2:16099177-16099196 | None:intergenic | 45.0% |
| ! | TGCCATCAAGGCCAAGTTTT+AGG | + | chr2_2:16099177-16099196 | Msa0240720:CDS | 45.0% |
| !! | GACCTAAAACTTGGCCTTGA+TGG | - | chr2_2:16099182-16099201 | None:intergenic | 45.0% |
| TGTGTATATGGTACTCCCTC+TGG | + | chr2_2:16099298-16099317 | Msa0240720:intron | 45.0% | |
| ! | ATTTCCGCTGCTCTTGTTTG+AGG | - | chr2_2:16099507-16099526 | None:intergenic | 45.0% |
| ! | CAGCGGAAATCTACTAGTCT+TGG | + | chr2_2:16099517-16099536 | Msa0240720:CDS | 45.0% |
| !! | ACTAGTCTTGGTGACCAAAC+TGG | + | chr2_2:16099529-16099548 | Msa0240720:CDS | 45.0% |
| TTCGCTTCGTTACCAAAGCT+TGG | + | chr2_2:16100150-16100169 | Msa0240720:CDS | 45.0% | |
| CAAAGCTTGGTTGAACTCTC+CGG | + | chr2_2:16100163-16100182 | Msa0240720:CDS | 45.0% | |
| AAAGCTTGGTTGAACTCTCC+GGG | + | chr2_2:16100164-16100183 | Msa0240720:CDS | 45.0% | |
| TCTTCAATGAGAGGATCACC+CGG | - | chr2_2:16100185-16100204 | None:intergenic | 45.0% | |
| AAAAGGCTCCACCAGAAGAA+AGG | + | chr2_2:16101035-16101054 | Msa0240720:CDS | 45.0% | |
| ACTAAAGGCCTTTCTTCTGG+TGG | - | chr2_2:16101046-16101065 | None:intergenic | 45.0% | |
| GCAACTAAAGGCCTTTCTTC+TGG | - | chr2_2:16101049-16101068 | None:intergenic | 45.0% | |
| TGCAATAGCAGATGTGTTGC+AGG | + | chr2_2:16101333-16101352 | Msa0240720:intron | 45.0% | |
| GGAGGTCATTTCTCTTATGC+AGG | + | chr2_2:16101481-16101500 | Msa0240720:CDS | 45.0% | |
| AGGAAGAAGAAGGTGAGAGT+TGG | + | chr2_2:16102049-16102068 | Msa0240720:intron | 45.0% | |
| TGCTAAGCTTGGAATGCCAT+TGG | - | chr2_2:16102148-16102167 | None:intergenic | 45.0% | |
| !!! | ATTTGATTATTTTTTATATA+TGG | + | chr2_2:16102011-16102030 | Msa0240720:intron | 5.0% |
| GGCAAGGGAACAATTGGAAG+AGG | - | chr2_2:16099161-16099180 | None:intergenic | 50.0% | |
| TTGGCCTCAAACAAGAGCAG+CGG | + | chr2_2:16099500-16099519 | Msa0240720:CDS | 50.0% | |
| CGGAGAGTTCAACCAAGCTT+TGG | - | chr2_2:16100165-16100184 | None:intergenic | 50.0% | |
| GGACTCAAAGATGGATGGAG+TGG | + | chr2_2:16100977-16100996 | Msa0240720:CDS | 50.0% | |
| ! | CTTCTGGTGGAGCCTTTTGA+AGG | - | chr2_2:16101033-16101052 | None:intergenic | 50.0% |
| CAAGCATGACCGGAGGTTTA+GGG | - | chr2_2:16101262-16101281 | None:intergenic | 50.0% | |
| TCAAGCATGACCGGAGGTTT+AGG | - | chr2_2:16101263-16101282 | None:intergenic | 50.0% | |
| AGAGTTTCAAGCATGACCGG+AGG | - | chr2_2:16101269-16101288 | None:intergenic | 50.0% | |
| AGACTTGCACGTGCTAAGCT+TGG | - | chr2_2:16102159-16102178 | None:intergenic | 50.0% | |
| TCGTGTTGCATTCGAGCCGA+AGG | + | chr2_2:16100704-16100723 | Msa0240720:CDS | 55.0% | |
| GGGTTCGGACCCTAAACCTC+CGG | + | chr2_2:16101250-16101269 | Msa0240720:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 16098219 | 16102377 | 16098219 | ID=Msa0240720;Name=Msa0240720 |
| chr2_2 | mRNA | 16098219 | 16102377 | 16098219 | ID=Msa0240720-mRNA-1;Parent=Msa0240720;Name=Msa0240720-mRNA-1;_AED=0.17;_eAED=0.17;_QI=114|1|0.83|1|1|1|6|0|909 |
| chr2_2 | exon | 16098219 | 16099258 | 16098219 | ID=Msa0240720-mRNA-1:exon:6594;Parent=Msa0240720-mRNA-1 |
| chr2_2 | exon | 16099486 | 16099612 | 16099486 | ID=Msa0240720-mRNA-1:exon:6595;Parent=Msa0240720-mRNA-1 |
| chr2_2 | exon | 16099915 | 16100855 | 16099915 | ID=Msa0240720-mRNA-1:exon:6596;Parent=Msa0240720-mRNA-1 |
| chr2_2 | exon | 16100949 | 16101096 | 16100949 | ID=Msa0240720-mRNA-1:exon:6597;Parent=Msa0240720-mRNA-1 |
| chr2_2 | exon | 16101355 | 16101615 | 16101355 | ID=Msa0240720-mRNA-1:exon:6598;Parent=Msa0240720-mRNA-1 |
| chr2_2 | exon | 16102051 | 16102377 | 16102051 | ID=Msa0240720-mRNA-1:exon:6599;Parent=Msa0240720-mRNA-1 |
| chr2_2 | five_prime_UTR | 16098219 | 16098332 | 16098219 | ID=Msa0240720-mRNA-1:five_prime_utr;Parent=Msa0240720-mRNA-1 |
| chr2_2 | CDS | 16098333 | 16099258 | 16098333 | ID=Msa0240720-mRNA-1:cds;Parent=Msa0240720-mRNA-1 |
| chr2_2 | CDS | 16099486 | 16099612 | 16099486 | ID=Msa0240720-mRNA-1:cds;Parent=Msa0240720-mRNA-1 |
| chr2_2 | CDS | 16099915 | 16100855 | 16099915 | ID=Msa0240720-mRNA-1:cds;Parent=Msa0240720-mRNA-1 |
| chr2_2 | CDS | 16100949 | 16101096 | 16100949 | ID=Msa0240720-mRNA-1:cds;Parent=Msa0240720-mRNA-1 |
| chr2_2 | CDS | 16101355 | 16101615 | 16101355 | ID=Msa0240720-mRNA-1:cds;Parent=Msa0240720-mRNA-1 |
| chr2_2 | CDS | 16102051 | 16102377 | 16102051 | ID=Msa0240720-mRNA-1:cds;Parent=Msa0240720-mRNA-1 |
| Gene Sequence |
| Protein sequence |
