AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0331140


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0331140 MtrunA17_Chr2g0313941 87.361 451 57 0 1 451 1 451 0.0 817
Msa0331140 MtrunA17_Chr7g0259181 33.406 458 272 13 6 446 21 462 1.07e-63 213
Msa0331140 MtrunA17_Chr2g0314171 32.692 468 274 15 2 446 28 477 2.30e-57 196
Msa0331140 MtrunA17_Chr2g0319411 36.313 358 204 10 7 350 17 364 4.51e-53 182
Msa0331140 MtrunA17_Chr2g0319401 41.071 280 158 6 3 282 17 289 4.67e-52 179
Msa0331140 MtrunA17_Chr2g0319431 33.428 353 212 10 68 411 7 345 7.44e-47 165
Msa0331140 MtrunA17_Chr1g0156971 33.333 405 235 16 44 430 116 503 2.20e-40 151
Msa0331140 MtrunA17_Chr2g0314181 34.295 312 189 9 1 299 16 324 2.44e-38 142
Msa0331140 MtrunA17_Chr1g0212411 32.028 281 169 6 2 277 21 284 5.94e-36 135
Msa0331140 MtrunA17_Chr2g0311161 30.576 399 213 17 5 353 51 435 3.14e-30 122
Msa0331140 MtrunA17_Chr5g0394141 28.092 477 288 13 11 446 30 492 6.49e-30 121
Msa0331140 MtrunA17_Chr1g0212391 33.459 266 155 7 5 261 18 270 1.70e-29 117
Msa0331140 MtrunA17_Chr4g0014451 31.148 305 190 10 13 303 3 301 5.85e-29 115
Msa0331140 MtrunA17_Chr6g0458491 29.396 364 228 14 62 409 118 468 1.56e-27 114
Msa0331140 MtrunA17_Chr2g0319391 41.333 150 85 3 68 216 8 155 5.16e-26 103
Msa0331140 MtrunA17_Chr4g0041581 26.450 431 299 11 12 434 22 442 6.92e-26 109
Msa0331140 MtrunA17_Chr4g0041631 26.552 467 287 17 13 445 19 463 1.19e-25 109
Msa0331140 MtrunA17_Chr5g0394131 23.142 471 309 9 18 444 26 487 1.35e-25 108
Msa0331140 MtrunA17_Chr8g0335381 28.954 411 242 16 11 400 20 401 2.45e-25 108
Msa0331140 MtrunA17_Chr3g0096461 25.054 467 311 14 5 447 15 466 6.73e-23 100
Msa0331140 MtrunA17_Chr4g0041601 26.196 439 261 15 13 411 19 434 1.95e-22 99.8
Msa0331140 MtrunA17_Chr5g0438191 23.476 443 296 12 13 443 13 424 1.59e-21 96.7
Msa0331140 MtrunA17_Chr7g0231671 24.396 455 321 11 5 445 11 456 2.83e-20 93.2
Msa0331140 MtrunA17_Chr5g0416781 25.597 461 314 12 5 448 11 459 4.43e-20 92.8
Msa0331140 MtrunA17_Chr0c03g0490011 25.635 433 244 18 13 416 8 391 1.66e-18 87.4
Msa0331140 MtrunA17_Chr1g0150411 26.244 442 251 17 3 411 8 407 2.10e-18 87.4
Msa0331140 MtrunA17_Chr7g0222771 24.834 302 207 8 12 303 23 314 2.29e-18 86.3
Msa0331140 MtrunA17_Chr4g0041681 28.467 274 153 9 12 269 16 262 3.32e-18 85.5
Msa0331140 MtrunA17_Chr3g0083831 28.435 313 181 12 11 303 20 309 1.20e-17 83.6
Msa0331140 MtrunA17_Chr3g0137721 22.366 465 259 17 13 449 11 401 1.96e-16 80.9
Msa0331140 MtrunA17_Chr7g0222761 22.992 361 251 11 5 351 18 365 4.27e-16 79.7
Msa0331140 MtrunA17_Chr2g0326831 25.105 478 293 18 9 437 66 527 7.09e-16 79.7
Msa0331140 MtrunA17_Chr5g0395131 32.203 177 101 8 240 412 88 249 1.12e-15 77.4
Msa0331140 MtrunA17_Chr3g0136291 37.324 142 76 5 13 148 14 148 2.35e-15 77.0
Msa0331140 MtrunA17_Chr8g0362491 24.301 465 295 19 12 445 24 462 8.29e-15 76.3
Msa0331140 MtrunA17_Chr1g0212401 38.261 115 67 2 317 431 51 161 1.11e-14 72.0
Msa0331140 MtrunA17_Chr2g0314161 29.771 131 87 2 317 447 2 127 1.58e-14 70.1
Msa0331140 MtrunA17_Chr2g0325431 24.729 461 255 20 3 424 9 416 1.91e-14 75.1
Msa0331140 MtrunA17_Chr1g0154471 24.197 467 277 21 7 447 11 426 4.60e-14 73.9
Msa0331140 MtrunA17_Chr6g0471031 24.215 446 264 19 13 445 61 445 2.09e-13 72.0
Msa0331140 MtrunA17_Chr5g0431691 24.385 447 254 18 13 446 5 380 2.59e-13 71.2
Msa0331140 MtrunA17_Chr2g0319421 46.154 78 41 1 3 80 17 93 2.79e-13 66.6
Msa0331140 MtrunA17_Chr8g0362021 23.226 465 293 16 13 445 20 452 3.84e-13 71.2
Msa0331140 MtrunA17_Chr5g0395111 28.846 208 109 8 9 178 25 231 4.42e-13 68.9
Msa0331140 MtrunA17_Chr2g0314191 34.454 119 74 3 319 436 33 148 5.48e-13 67.0
Msa0331140 MtrunA17_Chr5g0423901 23.789 454 262 16 6 446 2 384 6.43e-13 70.1
Msa0331140 MtrunA17_Chr4g0014441 36.170 94 59 1 319 412 15 107 6.51e-13 65.9
Msa0331140 MtrunA17_Chr2g0303231 27.168 173 121 3 11 178 23 195 2.00e-12 68.6
Msa0331140 MtrunA17_Chr1g0151571 23.444 482 285 20 4 449 6 439 2.60e-12 68.6
Msa0331140 MtrunA17_Chr8g0340611 31.373 153 88 5 6 141 3 155 3.19e-12 64.7
Msa0331140 MtrunA17_Chr3g0137681 32.432 148 88 3 7 146 4 147 6.01e-12 67.0
Msa0331140 MtrunA17_Chr5g0435741 22.103 466 321 14 1 451 21 459 1.13e-11 66.6
Msa0331140 MtrunA17_Chr2g0325081 25.984 254 158 7 13 250 14 253 1.23e-11 65.9
Msa0331140 MtrunA17_Chr5g0438051 32.258 155 83 4 13 148 6 157 3.03e-11 65.1
Msa0331140 MtrunA17_Chr7g0236101 33.813 139 83 4 13 149 9 140 3.65e-11 61.6
Msa0331140 MtrunA17_Chr7g0226481 30.769 169 98 6 13 171 11 170 5.49e-11 63.9
Msa0331140 MtrunA17_Chr5g0395141 37.288 118 59 3 18 121 20 136 5.53e-11 60.5
Msa0331140 MtrunA17_Chr1g0148641 29.121 182 118 7 3 175 20 199 6.21e-11 64.3
Msa0331140 MtrunA17_Chr1g0150231 28.191 188 123 5 2 178 13 199 7.37e-11 63.9
Msa0331140 MtrunA17_Chr3g0132631 36.735 98 62 0 3 100 2 99 7.48e-11 63.5
Msa0331140 MtrunA17_Chr3g0086141 34.899 149 79 6 13 150 3 144 9.81e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0331140 AT3G14710.1 28.918 453 283 10 4 445 17 441 1.29e-41 153
Msa0331140 AT4G26340.1 26.339 448 284 13 13 445 2 418 1.37e-22 99.8
Msa0331140 AT4G10400.2 25.508 443 286 12 13 446 2 409 1.43e-22 99.8
Msa0331140 AT4G10400.3 25.508 443 286 12 13 446 2 409 1.43e-22 99.8
Msa0331140 AT4G10400.1 25.508 443 286 12 13 446 2 409 1.43e-22 99.8
Msa0331140 AT3G59200.2 27.394 376 221 11 12 353 6 363 2.21e-20 92.8
Msa0331140 AT3G59200.1 25.847 472 286 15 12 437 6 459 5.57e-20 92.8
Msa0331140 AT4G14096.2 28.611 360 224 13 10 353 5 347 5.23e-19 89.7
Msa0331140 AT4G14096.1 28.611 360 224 13 10 353 5 347 5.23e-19 89.7
Msa0331140 AT3G03030.1 25.000 432 285 14 13 411 2 427 1.52e-18 88.2
Msa0331140 AT3G60040.4 27.500 440 262 16 1 404 1 419 2.14e-18 88.2
Msa0331140 AT5G56560.2 24.045 445 290 14 15 445 7 417 2.32e-18 87.4
Msa0331140 AT5G22730.1 25.546 458 297 17 10 443 26 463 2.98e-18 87.4
Msa0331140 AT5G22730.3 25.546 458 297 17 10 443 26 463 2.98e-18 87.4
Msa0331140 AT3G60040.2 27.500 440 262 16 1 404 220 638 3.46e-18 87.8
Msa0331140 AT2G42730.1 25.103 486 285 19 12 451 4 456 3.49e-18 87.0
Msa0331140 AT3G60040.5 27.500 440 262 16 1 404 218 636 3.71e-18 87.8
Msa0331140 AT3G60040.1 27.500 440 262 16 1 404 220 638 3.73e-18 87.8
Msa0331140 AT3G60040.3 27.500 440 262 16 1 404 221 639 4.08e-18 87.8
Msa0331140 AT4G26350.1 23.922 464 290 16 13 448 2 430 7.06e-18 85.9
Msa0331140 AT4G09920.2 33.735 166 101 3 13 174 2 162 9.50e-18 84.0
Msa0331140 AT4G09920.4 33.735 166 101 3 13 174 2 162 9.50e-18 84.0
Msa0331140 AT4G09920.3 33.735 166 101 3 13 174 2 162 9.50e-18 84.0
Msa0331140 AT4G09920.1 33.735 166 101 3 13 174 2 162 1.05e-17 84.3
Msa0331140 AT4G09920.5 33.735 166 101 3 13 174 2 162 1.05e-17 84.3
Msa0331140 AT5G56380.2 24.009 454 309 14 13 446 2 439 2.32e-17 84.3
Msa0331140 AT5G56380.1 24.009 454 309 14 13 446 2 439 2.32e-17 84.3
Msa0331140 AT3G03030.2 26.433 314 203 10 13 303 2 310 3.02e-17 83.2
Msa0331140 AT2G26860.1 24.480 433 257 15 13 412 2 397 3.31e-17 83.6
Msa0331140 AT2G26860.2 24.480 433 257 15 13 412 2 397 3.31e-17 83.6
Msa0331140 AT4G14103.3 32.143 224 131 7 10 222 5 218 3.78e-17 83.2
Msa0331140 AT4G14103.1 32.143 224 131 7 10 222 5 218 3.78e-17 83.2
Msa0331140 AT3G42770.1 26.350 463 262 22 18 444 4 423 5.17e-17 84.0
Msa0331140 AT4G14103.2 32.143 224 131 7 10 222 5 218 5.23e-17 83.6
Msa0331140 AT3G58930.3 25.311 482 297 18 13 445 2 469 9.61e-17 82.8
Msa0331140 AT3G58930.1 25.311 482 297 18 13 445 2 469 9.61e-17 82.8
Msa0331140 AT3G58930.5 25.311 482 297 18 13 445 2 469 9.61e-17 82.8
Msa0331140 AT5G38590.2 23.678 435 290 11 13 435 2 406 1.15e-16 82.0
Msa0331140 AT1G06630.9 27.778 378 229 16 1 356 10 365 2.28e-16 81.3
Msa0331140 AT1G06630.2 27.778 378 229 16 1 356 1 356 2.70e-16 80.9
Msa0331140 AT1G06630.6 27.778 378 229 16 1 356 1 356 2.70e-16 80.9
Msa0331140 AT1G06630.4 27.778 378 229 16 1 356 1 356 2.70e-16 80.9
Msa0331140 AT1G06630.3 27.778 378 229 16 1 356 1 356 2.70e-16 80.9
Msa0331140 AT3G26922.1 26.939 245 155 7 5 240 6 235 3.19e-16 79.7
Msa0331140 AT3G26922.2 26.939 245 155 7 5 240 6 235 3.19e-16 79.7
Msa0331140 AT2G29910.3 30.131 229 130 8 10 227 2 211 3.52e-16 79.7
Msa0331140 AT2G29910.2 30.131 229 130 8 10 227 2 211 3.52e-16 79.7
Msa0331140 AT1G06630.1 27.778 378 229 16 1 356 1 356 3.88e-16 80.9
Msa0331140 AT1G48400.1 29.825 228 145 8 12 230 9 230 4.02e-16 80.9
Msa0331140 AT1G48400.2 29.825 228 145 8 12 230 9 230 5.69e-16 80.5
Msa0331140 AT1G06630.5 27.346 373 229 15 1 353 1 351 5.73e-16 79.3
Msa0331140 AT1G06630.8 27.346 373 229 15 1 353 1 351 5.73e-16 79.3
Msa0331140 AT2G29910.5 29.596 223 139 6 10 227 2 211 6.36e-16 79.3
Msa0331140 AT2G29910.7 29.596 223 139 6 10 227 2 211 6.36e-16 79.3
Msa0331140 AT2G29910.4 29.596 223 139 6 10 227 2 211 6.36e-16 79.3
Msa0331140 AT2G29910.1 29.596 223 139 6 10 227 2 211 6.36e-16 79.3
Msa0331140 AT4G13965.1 24.519 416 247 12 13 403 10 383 6.64e-16 79.7
Msa0331140 AT2G29910.6 29.596 223 139 6 10 227 26 235 7.27e-16 79.3
Msa0331140 AT5G56820.1 24.779 452 276 16 13 443 15 423 7.49e-16 79.7
Msa0331140 AT1G06630.7 29.237 236 151 8 1 226 1 230 1.38e-15 77.8
Msa0331140 AT5G53840.1 23.045 486 259 21 10 443 15 437 2.49e-15 78.2
Msa0331140 AT5G56420.1 22.560 461 286 15 12 445 5 421 3.08e-15 77.8
Msa0331140 AT5G56420.2 22.560 461 286 15 12 445 5 421 3.08e-15 77.8
Msa0331140 AT5G56420.3 22.560 461 286 15 12 445 5 421 3.08e-15 77.8
Msa0331140 AT3G03040.1 23.400 453 296 16 13 432 2 436 3.81e-15 77.8
Msa0331140 AT3G58940.1 26.984 378 212 18 13 359 2 346 3.93e-15 78.2
Msa0331140 AT3G58940.2 26.984 378 212 18 13 359 2 346 3.93e-15 78.2
Msa0331140 AT2G29930.3 24.167 480 304 18 3 445 2 458 8.18e-15 76.6
Msa0331140 AT2G29930.1 24.167 480 304 18 3 445 2 458 8.18e-15 76.6
Msa0331140 AT5G41630.1 30.939 181 108 6 10 175 9 187 8.98e-15 76.6
Msa0331140 AT3G59190.1 28.492 179 118 5 3 173 2 178 1.23e-14 75.9
Msa0331140 AT1G55030.2 25.845 414 243 18 13 403 19 391 1.95e-14 75.5
Msa0331140 AT1G55030.1 25.845 414 243 18 13 403 9 381 1.97e-14 75.5
Msa0331140 AT3G59240.1 26.107 429 279 15 12 411 7 426 2.21e-14 75.5
Msa0331140 AT3G59230.1 23.651 482 304 18 10 444 9 473 2.65e-14 75.5
Msa0331140 AT3G59190.2 28.492 179 118 5 3 173 2 178 3.35e-14 75.1
Msa0331140 AT4G27050.2 33.117 154 83 6 11 148 2 151 4.48e-14 74.3
Msa0331140 AT4G27050.3 33.117 154 83 6 11 148 2 151 4.48e-14 74.3
Msa0331140 AT4G27050.5 33.117 154 83 6 11 148 2 151 4.48e-14 74.3
Msa0331140 AT4G27050.4 33.117 154 83 6 11 148 2 151 4.48e-14 74.3
Msa0331140 AT4G27050.1 33.117 154 83 6 11 148 2 151 4.48e-14 74.3
Msa0331140 AT5G25860.1 24.843 479 289 20 4 445 3 447 5.08e-14 74.3
Msa0331140 AT1G52650.1 25.768 423 260 15 13 400 2 405 7.74e-14 73.9
Msa0331140 AT5G56410.1 24.884 430 258 18 20 412 10 411 9.33e-14 73.6
Msa0331140 AT3G58860.1 25.627 359 227 14 13 353 7 343 1.41e-13 72.8
Msa0331140 AT3G58900.4 25.490 408 260 15 13 385 2 400 1.82e-13 72.8
Msa0331140 AT4G10410.1 34.694 147 90 2 27 172 1 142 2.38e-13 70.5
Msa0331140 AT1G58310.1 27.792 385 220 14 12 353 7 376 2.75e-13 72.0
Msa0331140 AT5G60610.2 26.450 431 241 17 13 412 2 387 3.81e-13 71.2
Msa0331140 AT5G60610.1 26.450 431 241 17 13 412 2 387 3.81e-13 71.2
Msa0331140 AT3G49150.1 32.164 171 109 5 10 175 13 181 4.67e-13 71.2
Msa0331140 AT1G78750.2 30.270 185 119 5 5 180 8 191 5.54e-13 71.2
Msa0331140 AT1G78750.1 30.270 185 119 5 5 180 8 191 5.54e-13 71.2
Msa0331140 AT1G16930.2 22.449 490 289 18 1 443 1 446 6.11e-13 70.9
Msa0331140 AT1G16930.1 22.449 490 289 18 1 443 1 446 6.11e-13 70.9
Msa0331140 AT1G16930.3 22.449 490 289 18 1 443 1 446 6.11e-13 70.9
Msa0331140 AT1G78760.1 24.330 485 269 26 5 443 8 440 6.23e-13 70.9
Msa0331140 AT3G58900.3 37.405 131 72 5 13 135 2 130 8.27e-13 69.7
Msa0331140 AT3G58900.2 37.405 131 72 5 13 135 2 130 1.25e-12 69.3
Msa0331140 AT3G58900.1 37.405 131 72 5 13 135 2 130 1.25e-12 69.3
Msa0331140 AT3G58880.1 37.168 113 63 3 13 119 3 113 1.58e-12 69.7
Msa0331140 AT3G49030.2 28.571 224 145 6 3 221 13 226 1.60e-12 69.3
Msa0331140 AT3G49030.1 24.249 466 298 18 3 448 13 443 1.75e-12 69.3
Msa0331140 AT5G56690.1 23.250 400 261 12 15 392 4 379 1.79e-12 69.3
Msa0331140 AT4G00160.1 23.605 466 285 17 12 445 15 441 1.82e-12 69.3
Msa0331140 AT3G52680.1 21.429 462 298 14 12 445 20 444 2.04e-12 69.3
Msa0331140 AT3G50710.1 21.087 460 297 16 13 443 2 424 2.19e-12 68.9
Msa0331140 AT5G41830.2 30.769 182 99 8 1 158 1 179 2.33e-12 69.3
Msa0331140 AT1G80470.1 24.380 484 269 21 3 443 5 434 2.63e-12 68.9
Msa0331140 AT2G26030.3 21.528 432 279 17 13 411 4 408 2.73e-12 68.9
Msa0331140 AT2G26030.1 21.528 432 279 17 13 411 4 408 2.73e-12 68.9
Msa0331140 AT2G26030.4 21.364 440 275 17 13 411 4 413 2.92e-12 68.9
Msa0331140 AT1G69630.1 33.505 194 105 9 1 180 1 184 4.90e-12 68.2
Msa0331140 AT2G04230.1 30.526 190 122 6 1 183 1 187 5.04e-12 68.2
Msa0331140 AT5G56440.1 33.140 172 102 7 13 178 2 166 5.17e-12 67.8
Msa0331140 AT3G44060.1 24.000 450 291 14 18 444 4 425 5.21e-12 67.8
Msa0331140 AT5G38392.1 31.544 149 91 4 13 152 2 148 5.52e-12 65.5
Msa0331140 AT1G66310.1 24.153 472 270 20 11 443 17 439 6.82e-12 67.8
Msa0331140 AT4G13960.2 24.263 441 258 17 13 407 2 412 7.04e-12 67.8
Msa0331140 AT4G13960.1 24.263 441 258 17 13 407 2 412 7.04e-12 67.8
Msa0331140 AT3G58960.1 25.886 367 229 16 13 353 2 351 7.70e-12 67.4
Msa0331140 AT3G49040.1 30.088 226 121 9 13 221 17 222 8.58e-12 66.2
Msa0331140 AT3G59210.2 24.576 472 300 18 12 444 6 460 8.73e-12 67.4
Msa0331140 AT3G59210.1 24.576 472 300 18 12 444 6 460 8.73e-12 67.4
Msa0331140 AT3G59210.5 24.576 472 300 18 12 444 6 460 8.73e-12 67.4
Msa0331140 AT3G59210.4 24.576 472 300 18 12 444 6 460 8.73e-12 67.4
Msa0331140 AT3G59210.3 24.576 472 300 18 12 444 6 460 8.73e-12 67.4
Msa0331140 AT1G64540.1 26.163 344 196 15 12 346 4 298 1.01e-11 67.0
Msa0331140 AT1G64540.2 26.163 344 196 15 12 346 4 298 1.01e-11 67.0
Msa0331140 AT5G38590.1 27.570 214 144 4 13 223 2 207 1.13e-11 65.9
Msa0331140 AT5G22730.2 26.703 367 231 14 10 354 26 376 1.68e-11 66.2
Msa0331140 AT3G59000.2 27.311 238 158 8 13 241 2 233 1.78e-11 65.9
Msa0331140 AT5G22610.2 32.639 144 83 3 13 148 18 155 1.96e-11 66.2
Msa0331140 AT5G22610.1 32.639 144 83 3 13 148 18 155 2.01e-11 66.2
Msa0331140 AT5G56560.1 30.909 165 108 3 15 178 7 166 3.18e-11 65.9
Msa0331140 AT5G22670.1 23.690 477 292 18 1 443 1 439 5.05e-11 65.1
Msa0331140 AT5G62970.1 24.324 444 259 16 20 417 10 422 5.08e-11 65.1
Msa0331140 AT3G58980.1 23.504 468 299 19 13 447 2 443 5.84e-11 65.1
Msa0331140 AT3G26922.4 26.939 245 130 9 5 240 6 210 8.39e-11 63.2

Find 67 sgRNAs with CRISPR-Local

Find 135 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCAAAGTATTTCAGTTTAA+AGG 0.139696 2_4:+46539687 Msa0331140:CDS
TTCAAGATCCTATTTGTTTC+TGG 0.143234 2_4:-46540153 None:intergenic
TCATTAGGTACATGAAATTT+TGG 0.155185 2_4:-46540430 None:intergenic
AAACGAGTTGAAGAAGTTAA+AGG 0.275461 2_4:+46540063 Msa0331140:three_prime_UTR
AATAGTGCGAGATATGATTT+TGG 0.275933 2_4:-46540279 None:intergenic
AAACAAGAGTGTTAAGAATA+GGG 0.284563 2_4:-46539213 None:intergenic
ATCATGTAAATATGCCATTA+AGG 0.287357 2_4:+46538748 Msa0331140:CDS
CCAAGATTCTAGCCCTAATA+AGG 0.291135 2_4:+46540087 Msa0331140:three_prime_UTR
GCATCGACTATAAACCTTAA+TGG 0.306271 2_4:-46538762 None:intergenic
GAATATAAGCTAGAGCTTCT+TGG 0.314782 2_4:-46537190 None:intergenic
TGTTGTTGATGAAGATAAAA+AGG 0.327183 2_4:+46538871 Msa0331140:CDS
CCTTATTAGGGCTAGAATCT+TGG 0.341869 2_4:-46540087 None:intergenic
AAAACAAGAGTGTTAAGAAT+AGG 0.349193 2_4:-46539214 None:intergenic
TTCACCAATCTGCCACTCTT+TGG 0.354370 2_4:+46539124 Msa0331140:CDS
TTTCTTGAACGTTTGCATAT+TGG 0.360537 2_4:+46540330 Msa0331140:three_prime_UTR
CTGTCAATCCAGAAACAAAT+AGG 0.361906 2_4:+46540145 Msa0331140:three_prime_UTR
GCTTCAAACACTCTGAGAAT+TGG 0.368609 2_4:-46538629 None:intergenic
AAACTAATGTTCTGTGTTGT+TGG 0.384561 2_4:-46538668 None:intergenic
CCTAACAGATTTCTCTTATG+AGG 0.392166 2_4:+46538784 Msa0331140:CDS
GAACGAGCACGATCTTTGTT+TGG 0.397360 2_4:+46539719 Msa0331140:CDS
TACATGATTCATTTGAATGA+TGG 0.398273 2_4:-46538733 None:intergenic
TACTGCAAATCACATTGTTA+AGG 0.399781 2_4:+46537272 Msa0331140:five_prime_UTR
ATAGCATTGCAAAATGTAAG+AGG 0.408495 2_4:+46539991 Msa0331140:three_prime_UTR
TTAAGCAAAGAGAGAAACTT+TGG 0.410637 2_4:-46538328 None:intergenic
GTGCTAACCGCGTCTATGAT+TGG 0.420698 2_4:-46538149 None:intergenic
TGTTGATTTGAAGAAAGTTA+AGG 0.423111 2_4:+46539818 Msa0331140:CDS
TGTTAAGAATAGGGGAATTG+TGG 0.424474 2_4:-46539204 None:intergenic
CCTTCCAAAGAGTGGCAGAT+TGG 0.439202 2_4:-46539128 None:intergenic
GGAAGGAAGGAAAACTTTAT+CGG 0.450001 2_4:-46538438 None:intergenic
GGATTTGCTTTATCTTAGAA+AGG 0.458843 2_4:+46538387 Msa0331140:CDS
CGAAGCCTTTCTCATTGAAA+AGG 0.460227 2_4:+46537144 Msa0331140:five_prime_UTR
TGAACGTTTGCATATTGGTA+TGG 0.468094 2_4:+46540335 Msa0331140:three_prime_UTR
GTTGGCAGATGCAGCAATCA+TGG 0.478397 2_4:+46539752 Msa0331140:CDS
ATTGCAGCTTAAAAGTGAAT+CGG 0.512067 2_4:-46538459 None:intergenic
TTGCAGTTGTTAGAACACTT+TGG 0.513678 2_4:-46539858 None:intergenic
CCTCATAAGAGAAATCTGTT+AGG 0.515819 2_4:-46538784 None:intergenic
CCAATCTGCCACTCTTTGGA+AGG 0.524604 2_4:+46539128 Msa0331140:CDS
AACAAGAGTGTTAAGAATAG+GGG 0.527875 2_4:-46539212 None:intergenic
CTCAGAGTGTTTGAAGCTAG+AGG 0.531893 2_4:+46538635 Msa0331140:CDS
AAATTATCTGCAACTAAATG+AGG 0.533814 2_4:+46539153 Msa0331140:CDS
CTAACAGATTTCTCTTATGA+GGG 0.536932 2_4:+46538785 Msa0331140:CDS
TGGCACCTCTGCGAAGAAGT+TGG 0.538216 2_4:+46540242 Msa0331140:three_prime_UTR
ACTATCATCAAAATTTAGAT+CGG 0.538379 2_4:-46538216 None:intergenic
TTTCAATGAGAAAGGCTTCG+TGG 0.539551 2_4:-46537141 None:intergenic
TCAACAAGGGAAACAACAAA+AGG 0.551520 2_4:+46538065 Msa0331140:CDS
CTATGATTGGAATGAAAGAC+AGG 0.554573 2_4:-46538136 None:intergenic
ATGCATCTCAGATAAGTGAA+TGG 0.564518 2_4:+46538366 Msa0331140:CDS
GGAGATGATGATGATATCGC+CGG 0.568358 2_4:+46539773 Msa0331140:CDS
CTGCAACTAAATGAGGTCAC+TGG 0.573768 2_4:+46539160 Msa0331140:CDS
ATTGAAAACTTCTCAAGTAA+CGG 0.575552 2_4:-46538698 None:intergenic
TTAAAAGTGAATCGGAAGGA+AGG 0.580749 2_4:-46538451 None:intergenic
TAATTTAACCTTCCAAAGAG+TGG 0.585797 2_4:-46539136 None:intergenic
TCAGAGTGTTTGAAGCTAGA+GGG 0.587975 2_4:+46538636 Msa0331140:CDS
CTTTCTTGAAAACTCATGAG+AGG 0.595569 2_4:-46540303 None:intergenic
TTGTTTGGTAAAATTCGTGT+TGG 0.601366 2_4:+46539734 Msa0331140:CDS
AGATGTCTTTACTTCTGCAA+CGG 0.610724 2_4:+46539641 Msa0331140:CDS
TTGAAGCTAGAGGGTGCGAA+TGG 0.623897 2_4:+46538645 Msa0331140:CDS
TTGTTGAAGTCACAGTAGAG+TGG 0.626409 2_4:+46540209 Msa0331140:three_prime_UTR
AGGAAGTCATGGATTCAACA+AGG 0.633232 2_4:+46538051 Msa0331140:exon
CAGCTTAAAAGTGAATCGGA+AGG 0.637096 2_4:-46538455 None:intergenic
AGGATCTTGAACACACAGCA+AGG 0.639460 2_4:+46540165 Msa0331140:three_prime_UTR
AGTAGAGTGGCATTGCGACA+TGG 0.642468 2_4:+46540222 Msa0331140:three_prime_UTR
GGAAGTCATGGATTCAACAA+GGG 0.658708 2_4:+46538052 Msa0331140:exon
GGAAACCAACTTCTTCGCAG+AGG 0.659960 2_4:-46540247 None:intergenic
AAGATGTTCAAAACACGACA+CGG 0.690131 2_4:+46539911 Msa0331140:exon
TTTCATTCCAATCATAGACG+CGG 0.701190 2_4:+46538142 Msa0331140:CDS
AAGCTTGACTGAAAGCAGTG+AGG 0.715060 2_4:-46539666 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAGTTTTTTGATATTAAGTT+AGG - chr2_4:46537536-46537555 None:intergenic 15.0%
!! AGTTAAGATATTTATTATCT+TGG + chr2_4:46537624-46537643 Msa0331140:intron 15.0%
!! ATGAACAATAAATATAATTC+AGG - chr2_4:46537711-46537730 None:intergenic 15.0%
!! ATTAAATTTCTTTGAACAAA+AGG - chr2_4:46539266-46539285 None:intergenic 15.0%
!!! TATGTAATTTTTCCTTATTA+GGG - chr2_4:46540102-46540121 None:intergenic 15.0%
!!! ATATGTAATTTTTCCTTATT+AGG - chr2_4:46540103-46540122 None:intergenic 15.0%
!! CTTAAAAAGAAATTCAAGAA+TGG + chr2_4:46537399-46537418 Msa0331140:intron 20.0%
!!! AAGTTAGTTGTAAATTTGTT+AGG - chr2_4:46537655-46537674 None:intergenic 20.0%
!! AACAAATTTACAACTAACTT+TGG + chr2_4:46537655-46537674 Msa0331140:intron 20.0%
!!! TTTTTTATCTTAACAAGCTT+TGG + chr2_4:46537804-46537823 Msa0331140:intron 20.0%
!! ACTATCATCAAAATTTAGAT+CGG - chr2_4:46538219-46538238 None:intergenic 20.0%
!!! AGTTATATCTTTTGAACAAT+TGG - chr2_4:46538600-46538619 None:intergenic 20.0%
!!! GTTTTACTTAATGTAAGTTT+AGG + chr2_4:46539232-46539251 Msa0331140:intron 20.0%
!!! TTCAAAGTATTTCAGTTTAA+AGG + chr2_4:46539687-46539706 Msa0331140:CDS 20.0%
!! TAGCTTATATTCATTTTGAG+AGG + chr2_4:46537228-46537247 Msa0331140:five_prime_UTR 25.0%
! ACTACCATTCAATATAAACT+CGG - chr2_4:46537359-46537378 None:intergenic 25.0%
!!! TTTTTTACAGGCTCATAATT+TGG + chr2_4:46537503-46537522 Msa0331140:intron 25.0%
! ATAATATCAGTGAATAATCC+TGG + chr2_4:46537832-46537851 Msa0331140:intron 25.0%
! CTCAAATGATTAATGAGATT+CGG - chr2_4:46537917-46537936 None:intergenic 25.0%
!!! AATTTTGATGATAGTTTGCT+TGG + chr2_4:46538224-46538243 Msa0331140:CDS 25.0%
! TAAGAAGAAAAAGATGCAAA+AGG + chr2_4:46538250-46538269 Msa0331140:CDS 25.0%
! TTCAAAAACTTAGCATTTCT+GGG + chr2_4:46538552-46538571 Msa0331140:CDS 25.0%
! ATTGAAAACTTCTCAAGTAA+CGG - chr2_4:46538701-46538720 None:intergenic 25.0%
!! AGAAGTTTTCAATAGCAATA+TGG + chr2_4:46538708-46538727 Msa0331140:CDS 25.0%
! TACATGATTCATTTGAATGA+TGG - chr2_4:46538736-46538755 None:intergenic 25.0%
! ATCATGTAAATATGCCATTA+AGG + chr2_4:46538748-46538767 Msa0331140:CDS 25.0%
!! TGTTGTTGATGAAGATAAAA+AGG + chr2_4:46538871-46538890 Msa0331140:CDS 25.0%
! TGAAGATAAAAAGGATAGAA+TGG + chr2_4:46538880-46538899 Msa0331140:CDS 25.0%
!! TTTCTTTTACGATACATGAA+CGG + chr2_4:46538988-46539007 Msa0331140:intron 25.0%
!! TAAATTTTTCTTTGTCCTAC+AGG + chr2_4:46539078-46539097 Msa0331140:intron 25.0%
! AAATTATCTGCAACTAAATG+AGG + chr2_4:46539153-46539172 Msa0331140:CDS 25.0%
!!! AAACAAGAGTGTTAAGAATA+GGG - chr2_4:46539216-46539235 None:intergenic 25.0%
!!! AAAACAAGAGTGTTAAGAAT+AGG - chr2_4:46539217-46539236 None:intergenic 25.0%
! GAGTTTATGAAAACAACTTA+AGG - chr2_4:46539400-46539419 None:intergenic 25.0%
! ATAGCTTATATGAAATCAGT+TGG + chr2_4:46539446-46539465 Msa0331140:intron 25.0%
! TCATGACACAAAAAAATTTC+AGG + chr2_4:46539599-46539618 Msa0331140:intron 25.0%
! CATGACACAAAAAAATTTCA+GGG + chr2_4:46539600-46539619 Msa0331140:intron 25.0%
!!! TGTTGATTTGAAGAAAGTTA+AGG + chr2_4:46539818-46539837 Msa0331140:CDS 25.0%
!!! ATATGATTTTGGTTTCTGTT+TGG - chr2_4:46540271-46540290 None:intergenic 25.0%
! TGTTTCCTTTTCAATGAGAA+AGG - chr2_4:46537152-46537171 None:intergenic 30.0%
TACTGCAAATCACATTGTTA+AGG + chr2_4:46537272-46537291 Msa0331140:five_prime_UTR 30.0%
GAAACCGAGTTTATATTGAA+TGG + chr2_4:46537352-46537371 Msa0331140:intron 30.0%
AGTTATGCCTTAGAATTTCT+GGG - chr2_4:46537484-46537503 None:intergenic 30.0%
AAGTTATGCCTTAGAATTTC+TGG - chr2_4:46537485-46537504 None:intergenic 30.0%
!!! CTAAGGCATAACTTTTTTAC+AGG + chr2_4:46537491-46537510 Msa0331140:intron 30.0%
CTAGCATCTTATCAAAAAGA+TGG + chr2_4:46538171-46538190 Msa0331140:CDS 30.0%
!! CAAAAAGATGGATTGAAGTT+TGG + chr2_4:46538183-46538202 Msa0331140:CDS 30.0%
TTAAGCAAAGAGAGAAACTT+TGG - chr2_4:46538331-46538350 None:intergenic 30.0%
! GGATTTGCTTTATCTTAGAA+AGG + chr2_4:46538387-46538406 Msa0331140:CDS 30.0%
ATTGCAGCTTAAAAGTGAAT+CGG - chr2_4:46538462-46538481 None:intergenic 30.0%
!! TGCTAAGTTTTTGAAGGTTT+TGG - chr2_4:46538547-46538566 None:intergenic 30.0%
! CAGAAATGCTAAGTTTTTGA+AGG - chr2_4:46538553-46538572 None:intergenic 30.0%
CTTCAAAAACTTAGCATTTC+TGG + chr2_4:46538551-46538570 Msa0331140:CDS 30.0%
AAACTAATGTTCTGTGTTGT+TGG - chr2_4:46538671-46538690 None:intergenic 30.0%
CTAACAGATTTCTCTTATGA+GGG + chr2_4:46538785-46538804 Msa0331140:CDS 30.0%
! GCTAAAGTTACTGTTTTACA+AGG + chr2_4:46538958-46538977 Msa0331140:CDS 30.0%
TAATTTAACCTTCCAAAGAG+TGG - chr2_4:46539139-46539158 None:intergenic 30.0%
!! AACAAGAGTGTTAAGAATAG+GGG - chr2_4:46539215-46539234 None:intergenic 30.0%
AACATAACTGCTTACGTATA+AGG - chr2_4:46539500-46539519 None:intergenic 30.0%
TATGTAACAAAGACACTTTC+TGG - chr2_4:46539548-46539567 None:intergenic 30.0%
TTGTTTGGTAAAATTCGTGT+TGG + chr2_4:46539734-46539753 Msa0331140:CDS 30.0%
ATAGCATTGCAAAATGTAAG+AGG + chr2_4:46539991-46540010 Msa0331140:three_prime_UTR 30.0%
! AAACGAGTTGAAGAAGTTAA+AGG + chr2_4:46540063-46540082 Msa0331140:three_prime_UTR 30.0%
TTCAAGATCCTATTTGTTTC+TGG - chr2_4:46540156-46540175 None:intergenic 30.0%
! AATAGTGCGAGATATGATTT+TGG - chr2_4:46540282-46540301 None:intergenic 30.0%
TTTCTTGAACGTTTGCATAT+TGG + chr2_4:46540330-46540349 Msa0331140:three_prime_UTR 30.0%
GAATATAAGCTAGAGCTTCT+TGG - chr2_4:46537193-46537212 None:intergenic 35.0%
ACATGAACCCAGAAATTCTA+AGG + chr2_4:46537474-46537493 Msa0331140:intron 35.0%
GCGATTAAGTTATGGACTTA+TGG + chr2_4:46537946-46537965 Msa0331140:intron 35.0%
!! TGTCATTTGTTATGTGTACC+AGG + chr2_4:46538019-46538038 Msa0331140:intron 35.0%
TCAACAAGGGAAACAACAAA+AGG + chr2_4:46538065-46538084 Msa0331140:CDS 35.0%
CTATGATTGGAATGAAAGAC+AGG - chr2_4:46538139-46538158 None:intergenic 35.0%
TTTCATTCCAATCATAGACG+CGG + chr2_4:46538142-46538161 Msa0331140:CDS 35.0%
ATGCATCTCAGATAAGTGAA+TGG + chr2_4:46538366-46538385 Msa0331140:CDS 35.0%
GGAAGGAAGGAAAACTTTAT+CGG - chr2_4:46538441-46538460 None:intergenic 35.0%
TTAAAAGTGAATCGGAAGGA+AGG - chr2_4:46538454-46538473 None:intergenic 35.0%
!! TTTTGGAGACAAACAGATAC+GGG - chr2_4:46538530-46538549 None:intergenic 35.0%
!!! GTTTTGGAGACAAACAGATA+CGG - chr2_4:46538531-46538550 None:intergenic 35.0%
!! GCATCGACTATAAACCTTAA+TGG - chr2_4:46538765-46538784 None:intergenic 35.0%
CCTCATAAGAGAAATCTGTT+AGG - chr2_4:46538787-46538806 None:intergenic 35.0%
CCTAACAGATTTCTCTTATG+AGG + chr2_4:46538784-46538803 Msa0331140:CDS 35.0%
! TCTTTGTCCTACAGGTTTTA+AGG + chr2_4:46539086-46539105 Msa0331140:intron 35.0%
TGTTAAGAATAGGGGAATTG+TGG - chr2_4:46539207-46539226 None:intergenic 35.0%
!! GTTGTTTTCATAAACTCTCG+AGG + chr2_4:46539403-46539422 Msa0331140:intron 35.0%
AGATGTCTTTACTTCTGCAA+CGG + chr2_4:46539641-46539660 Msa0331140:CDS 35.0%
TTGCAGTTGTTAGAACACTT+TGG - chr2_4:46539861-46539880 None:intergenic 35.0%
AAGATGTTCAAAACACGACA+CGG + chr2_4:46539911-46539930 Msa0331140:exon 35.0%
CTGTCAATCCAGAAACAAAT+AGG + chr2_4:46540145-46540164 Msa0331140:three_prime_UTR 35.0%
CTTTCTTGAAAACTCATGAG+AGG - chr2_4:46540306-46540325 None:intergenic 35.0%
!! CTCTCATGAGTTTTCAAGAA+AGG + chr2_4:46540304-46540323 Msa0331140:three_prime_UTR 35.0%
TGAACGTTTGCATATTGGTA+TGG + chr2_4:46540335-46540354 Msa0331140:three_prime_UTR 35.0%
!! CTTTTTGTGCAGTTGATACT+TGG - chr2_4:46540372-46540391 None:intergenic 35.0%
CGAAGCCTTTCTCATTGAAA+AGG + chr2_4:46537144-46537163 Msa0331140:five_prime_UTR 40.0%
GCCAAAGATTGTTCTAGCAA+GGG + chr2_4:46537854-46537873 Msa0331140:intron 40.0%
ACCCTTGCTAGAACAATCTT+TGG - chr2_4:46537858-46537877 None:intergenic 40.0%
CATAACTTAATCGCGTGGTT+GGG - chr2_4:46537940-46537959 None:intergenic 40.0%
AAGTCCATAACTTAATCGCG+TGG - chr2_4:46537945-46537964 None:intergenic 40.0%
AGGAAGTCATGGATTCAACA+AGG + chr2_4:46538051-46538070 Msa0331140:exon 40.0%
GGAAGTCATGGATTCAACAA+GGG + chr2_4:46538052-46538071 Msa0331140:exon 40.0%
CAGCTTAAAAGTGAATCGGA+AGG - chr2_4:46538458-46538477 None:intergenic 40.0%
! GCTTCAAACACTCTGAGAAT+TGG - chr2_4:46538632-46538651 None:intergenic 40.0%
! TCAGAGTGTTTGAAGCTAGA+GGG + chr2_4:46538636-46538655 Msa0331140:CDS 40.0%
TACCATGCCTTAAAACCTGT+AGG - chr2_4:46539096-46539115 None:intergenic 40.0%
!! GTCGTGTTTTGAACATCTTC+AGG - chr2_4:46539910-46539929 None:intergenic 40.0%
CCTTATTAGGGCTAGAATCT+TGG - chr2_4:46540090-46540109 None:intergenic 40.0%
CCAAGATTCTAGCCCTAATA+AGG + chr2_4:46540087-46540106 Msa0331140:three_prime_UTR 40.0%
TTGTTGAAGTCACAGTAGAG+TGG + chr2_4:46540209-46540228 Msa0331140:three_prime_UTR 40.0%
CTTTGAGCAATGCAAGCTTG+AGG + chr2_4:46537759-46537778 Msa0331140:intron 45.0%
! CAATGCAAGCTTGAGGTATC+AGG + chr2_4:46537766-46537785 Msa0331140:intron 45.0%
! CAAGCTTGAGGTATCAGGTA+TGG + chr2_4:46537771-46537790 Msa0331140:intron 45.0%
TGCTAGAACAATCTTTGGCC+AGG - chr2_4:46537853-46537872 None:intergenic 45.0%
GGCCAAAGATTGTTCTAGCA+AGG + chr2_4:46537853-46537872 Msa0331140:intron 45.0%
CCATAACTTAATCGCGTGGT+TGG - chr2_4:46537941-46537960 None:intergenic 45.0%
CCAACCACGCGATTAAGTTA+TGG + chr2_4:46537938-46537957 Msa0331140:intron 45.0%
! TGTGTACCAGGTGCTTTTGT+AGG + chr2_4:46538031-46538050 Msa0331140:intron 45.0%
!! TGACTTCCTACAAAAGCACC+TGG - chr2_4:46538040-46538059 None:intergenic 45.0%
! GGTGCTTTTGTAGGAAGTCA+TGG + chr2_4:46538040-46538059 Msa0331140:intron 45.0%
! CTCAGAGTGTTTGAAGCTAG+AGG + chr2_4:46538635-46538654 Msa0331140:CDS 45.0%
!!! GTCCTACAGGTTTTAAGGCA+TGG + chr2_4:46539091-46539110 Msa0331140:intron 45.0%
TTCACCAATCTGCCACTCTT+TGG + chr2_4:46539124-46539143 Msa0331140:CDS 45.0%
CTGCAACTAAATGAGGTCAC+TGG + chr2_4:46539160-46539179 Msa0331140:CDS 45.0%
AAGCTTGACTGAAAGCAGTG+AGG - chr2_4:46539669-46539688 None:intergenic 45.0%
GAACGAGCACGATCTTTGTT+TGG + chr2_4:46539719-46539738 Msa0331140:CDS 45.0%
! GGAGATGATGATGATATCGC+CGG + chr2_4:46539773-46539792 Msa0331140:CDS 45.0%
!!! TGATGATATCGCCGGCTTTT+TGG + chr2_4:46539781-46539800 Msa0331140:CDS 45.0%
GCATATCGTAGCCAAAAAGC+CGG - chr2_4:46539795-46539814 None:intergenic 45.0%
AGGATCTTGAACACACAGCA+AGG + chr2_4:46540165-46540184 Msa0331140:three_prime_UTR 45.0%
GTGCTAACCGCGTCTATGAT+TGG - chr2_4:46538152-46538171 None:intergenic 50.0%
! TTGAAGCTAGAGGGTGCGAA+TGG + chr2_4:46538645-46538664 Msa0331140:CDS 50.0%
CCTTCCAAAGAGTGGCAGAT+TGG - chr2_4:46539131-46539150 None:intergenic 50.0%
CCAATCTGCCACTCTTTGGA+AGG + chr2_4:46539128-46539147 Msa0331140:CDS 50.0%
GTTGGCAGATGCAGCAATCA+TGG + chr2_4:46539752-46539771 Msa0331140:CDS 50.0%
AGTAGAGTGGCATTGCGACA+TGG + chr2_4:46540222-46540241 Msa0331140:three_prime_UTR 50.0%
GGAAACCAACTTCTTCGCAG+AGG - chr2_4:46540250-46540269 None:intergenic 50.0%
TGGCACCTCTGCGAAGAAGT+TGG + chr2_4:46540242-46540261 Msa0331140:three_prime_UTR 55.0%
Chromosome Type Strat End Strand Name
chr2_4 gene 46537142 46540439 46537142 ID=Msa0331140;Name=Msa0331140
chr2_4 mRNA 46537142 46540439 46537142 ID=Msa0331140-mRNA-1;Parent=Msa0331140;Name=Msa0331140-mRNA-1;_AED=0.34;_eAED=0.34;_QI=170|1|1|1|0.66|0.5|4|528|451
chr2_4 exon 46537142 46537293 46537142 ID=Msa0331140-mRNA-1:exon:14095;Parent=Msa0331140-mRNA-1
chr2_4 exon 46538041 46538979 46538041 ID=Msa0331140-mRNA-1:exon:14096;Parent=Msa0331140-mRNA-1
chr2_4 exon 46539100 46539243 46539100 ID=Msa0331140-mRNA-1:exon:14097;Parent=Msa0331140-mRNA-1
chr2_4 exon 46539621 46540439 46539621 ID=Msa0331140-mRNA-1:exon:14098;Parent=Msa0331140-mRNA-1
chr2_4 five_prime_UTR 46537142 46537293 46537142 ID=Msa0331140-mRNA-1:five_prime_utr;Parent=Msa0331140-mRNA-1
chr2_4 five_prime_UTR 46538041 46538058 46538041 ID=Msa0331140-mRNA-1:five_prime_utr;Parent=Msa0331140-mRNA-1
chr2_4 CDS 46538059 46538979 46538059 ID=Msa0331140-mRNA-1:cds;Parent=Msa0331140-mRNA-1
chr2_4 CDS 46539100 46539243 46539100 ID=Msa0331140-mRNA-1:cds;Parent=Msa0331140-mRNA-1
chr2_4 CDS 46539621 46539911 46539621 ID=Msa0331140-mRNA-1:cds;Parent=Msa0331140-mRNA-1
chr2_4 three_prime_UTR 46539912 46540439 46539912 ID=Msa0331140-mRNA-1:three_prime_utr;Parent=Msa0331140-mRNA-1
Gene Sequence

>Msa0331140

ATGGATTCAACAAGGGAAACAACAAAAGGAGAAAGAGATTTGATTAGCACATTACATGAAAGCATTCTTAGTCAGATCCTGTCTTTCATTCCAATCATAGACGCGGTTAGCACTAGCATCTTATCAAAAAGATGGATTGAAGTTTGGAAATGCATAACCGATCTAAATTTTGATGATAGTTTGCTTGGTTCTAAGAAGAAAAAGATGCAAAAGGAGCAATTTGTGAAATTTGTTGAAAAAGTGCTTCTTCAATTCACTAACTCAAGCATCCAAAGTTTCTCTCTTTGCTTAACTAGTCATCAATATGATGCATCTCAGATAAGTGAATGGATTTGCTTTATCTTAGAAAGGAGAGTTCAAAAGCTTCGTGTTCAATATGCCGATAAAGTTTTCCTTCCTTCCGATTCACTTTTAAGCTGCAATTCTTTAGTTGAATTGACGCTTCAAATGAGATGTACTCTTAGTCTTCCCGTATCTGTTTGTCTCCAAAACCTTCAAAAACTTAGCATTTCTGGGATTAAATTAGTGAGTGATTTGTCCAATTGTTCAAAAGATATAACTCTTAACTTTCCAATTCTCAGAGTGTTTGAAGCTAGAGGGTGCGAATGGCCAACAACACAGAACATTAGTTTACAAGTACCGTTACTTGAGAAGTTTTCAATAGCAATATGGAACCATCATTCAAATGAATCATGTAAATATGCCATTAAGGTTTATAGTCGATGCCTAACAGATTTCTCTTATGAGGGCGATCTTGAACAAGACATCGTTCTCTGTGATTCGTCATCAATTCGTAATGCTTCTATTGTGATTGTTGTTGATGAAGATAAAAAGGATAGAATGGAAAAACTTGAATTTCAAGCACGTAGTCTTCTCAAACAAATCGATAACGTAGAACAGCTAAAGTTACTGTTTTACAAGGTTTTAAGGCATGGTAAAGATATTTTCACCAATCTGCCACTCTTTGGAAGGTTAAATTATCTGCAACTAAATGAGGTCACTGGTGAAGCTTTGATACAATTACTCCACAATTCCCCTATTCTTAACACTCTTGTTTTACTTAATGGAGTTGCTGATTTAGACAAAGATGTCTTTACTTCTGCAACGGTGCCTCACTGCTTTCAGTCAAGCTTCAAAGTATTTCAGTTTAAAGGATTTAATGCGAACGAGCACGATCTTTGTTTGGTAAAATTCGTGTTGGCAGATGCAGCAATCATGGAGATGATGATGATATCGCCGGCTTTTTGGCTACGATATGCAAATGTTGATTTGAAGAAAGTTAAGGAGCAGATACTCTCATTACCAAAGTGTTCTAACAACTGCAAGATAGAATTTTCTGATATCAGTAGATCCTGA

Protein sequence

>Msa0331140

MDSTRETTKGERDLISTLHESILSQILSFIPIIDAVSTSILSKRWIEVWKCITDLNFDDSLLGSKKKKMQKEQFVKFVEKVLLQFTNSSIQSFSLCLTSHQYDASQISEWICFILERRVQKLRVQYADKVFLPSDSLLSCNSLVELTLQMRCTLSLPVSVCLQNLQKLSISGIKLVSDLSNCSKDITLNFPILRVFEARGCEWPTTQNISLQVPLLEKFSIAIWNHHSNESCKYAIKVYSRCLTDFSYEGDLEQDIVLCDSSSIRNASIVIVVDEDKKDRMEKLEFQARSLLKQIDNVEQLKLLFYKVLRHGKDIFTNLPLFGRLNYLQLNEVTGEALIQLLHNSPILNTLVLLNGVADLDKDVFTSATVPHCFQSSFKVFQFKGFNANEHDLCLVKFVLADAAIMEMMMISPAFWLRYANVDLKKVKEQILSLPKCSNNCKIEFSDISRS*