Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0698760 | XP_003608499.1 | 98.901 | 273 | 3 | 0 | 1 | 273 | 1 | 273 | 0.0 | 551 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0698760 | sp|E0ZS47|UREG_ORYSI | 89.069 | 247 | 27 | 0 | 28 | 274 | 38 | 284 | 2.88e-164 | 459 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0698760 | G7JDZ5 | 98.901 | 273 | 3 | 0 | 1 | 273 | 1 | 273 | 0.0 | 551 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0007050 | Msa0698760 | 0.808572 | 2.900224e-50 | -8.615850e-47 |
| Msa0030000 | Msa0698760 | 0.835063 | 2.087011e-56 | -8.615850e-47 |
| Msa0050430 | Msa0698760 | 0.802506 | 5.433150e-49 | -8.615850e-47 |
| Msa0055590 | Msa0698760 | 0.808843 | 2.537643e-50 | -8.615850e-47 |
| Msa0079650 | Msa0698760 | 0.806359 | 8.548465e-50 | -8.615850e-47 |
| Msa0091770 | Msa0698760 | 0.818289 | 2.118545e-52 | -8.615850e-47 |
| Msa0105420 | Msa0698760 | 0.827335 | 1.655808e-54 | -8.615850e-47 |
| Msa0606060 | Msa0698760 | 0.828737 | 7.611146e-55 | -8.615850e-47 |
| Msa0615600 | Msa0698760 | 0.935620 | 6.366235e-97 | -8.615850e-47 |
| Msa0619330 | Msa0698760 | 0.803064 | 4.166331e-49 | -8.615850e-47 |
| Msa0624730 | Msa0698760 | 0.811895 | 5.567930e-51 | -8.615850e-47 |
| Msa0626230 | Msa0698760 | 0.828790 | 7.392272e-55 | -8.615850e-47 |
| Msa0647000 | Msa0698760 | 0.828709 | 7.730195e-55 | -8.615850e-47 |
| Msa0657670 | Msa0698760 | 0.811101 | 8.286282e-51 | -8.615850e-47 |
| Msa0674220 | Msa0698760 | 0.820710 | 5.939423e-53 | -8.615850e-47 |
| Msa0686610 | Msa0698760 | 0.823796 | 1.142328e-53 | -8.615850e-47 |
| Msa0697540 | Msa0698760 | 0.825631 | 4.219136e-54 | -8.615850e-47 |
| Msa0698760 | Msa0725480 | -0.815587 | 8.565781e-52 | -8.615850e-47 |
| Msa0698760 | Msa0726440 | 0.814704 | 1.345001e-51 | -8.615850e-47 |
| Msa0698760 | Msa0792510 | 0.828798 | 7.356368e-55 | -8.615850e-47 |
| Msa0698760 | Msa0814780 | 0.810144 | 1.333851e-50 | -8.615850e-47 |
| Msa0698760 | Msa0907700 | 0.806161 | 9.408664e-50 | -8.615850e-47 |
| Msa0698760 | Msa0980440 | 0.823356 | 1.447264e-53 | -8.615850e-47 |
| Msa0698760 | Msa1008490 | 0.809766 | 1.609105e-50 | -8.615850e-47 |
| Msa0698760 | Msa1016670 | 0.806111 | 9.641427e-50 | -8.615850e-47 |
| Msa0698760 | Msa1033440 | -0.814029 | 1.896377e-51 | -8.615850e-47 |
| Msa0698760 | Msa1038050 | 0.849039 | 4.176376e-60 | -8.615850e-47 |
| Msa0698760 | Msa1054890 | 0.810351 | 1.203825e-50 | -8.615850e-47 |
| Msa0698760 | Msa1056640 | 0.809436 | 1.893819e-50 | -8.615850e-47 |
| Msa0698760 | Msa1058010 | 0.820864 | 5.474989e-53 | -8.615850e-47 |
| Msa0698760 | Msa1076680 | 0.803815 | 2.912083e-49 | -8.615850e-47 |
| Msa0698760 | Msa1099030 | 0.801863 | 7.365991e-49 | -8.615850e-47 |
| Msa0698760 | Msa1102540 | 0.802717 | 4.914261e-49 | -8.615850e-47 |
| Msa0698760 | Msa1129720 | 0.800192 | 1.617300e-48 | -8.615850e-47 |
| Msa0698760 | Msa1166140 | -0.800869 | 1.177239e-48 | -8.615850e-47 |
| Msa0698760 | Msa1166240 | -0.802570 | 5.270218e-49 | -8.615850e-47 |
| Msa0698760 | Msa1171690 | 0.807986 | 3.865324e-50 | -8.615850e-47 |
| Msa0698760 | Msa1210640 | 0.810651 | 1.036781e-50 | -8.615850e-47 |
| Msa0698760 | Msa1210770 | 0.800827 | 1.200825e-48 | -8.615850e-47 |
| Msa0698760 | Msa1226600 | 0.812217 | 4.738333e-51 | -8.615850e-47 |
| Msa0698760 | Msa1239420 | 0.817735 | 2.826190e-52 | -8.615850e-47 |
| Msa0698760 | Msa1254770 | 0.811176 | 7.980040e-51 | -8.615850e-47 |
| Msa0698760 | Msa1254800 | 0.807527 | 4.838553e-50 | -8.615850e-47 |
| Msa0698760 | Msa1254950 | 0.805548 | 1.265528e-49 | -8.615850e-47 |
| Msa0698760 | Msa1283770 | 0.811124 | 8.192004e-51 | -8.615850e-47 |
| Msa0698760 | Msa1295690 | 0.802591 | 5.216631e-49 | -8.615850e-47 |
| Msa0698760 | Msa1299160 | 0.820950 | 5.232491e-53 | -8.615850e-47 |
| Msa0698760 | Msa1310110 | 0.810884 | 9.230570e-51 | -8.615850e-47 |
| Msa0698760 | Msa1329990 | 0.804470 | 2.126781e-49 | -8.615850e-47 |
| Msa0698760 | Msa1373950 | 0.819588 | 1.073639e-52 | -8.615850e-47 |
| Msa0698760 | Msa1375630 | 0.802224 | 6.209381e-49 | -8.615850e-47 |
| Msa0698760 | Msa1418200 | 0.812119 | 4.977085e-51 | -8.615850e-47 |
| Msa0698760 | Msa1456810 | 0.820493 | 6.662543e-53 | -8.615850e-47 |
| Msa0698760 | Msa1464560 | 0.830002 | 3.752779e-55 | -8.615850e-47 |
| Msa0125230 | Msa0698760 | 0.829234 | 5.768766e-55 | -8.615850e-47 |
| Msa0181410 | Msa0698760 | 0.817038 | 4.056029e-52 | -8.615850e-47 |
| Msa0194570 | Msa0698760 | 0.804733 | 1.874377e-49 | -8.615850e-47 |
| Msa0207000 | Msa0698760 | 0.825036 | 5.834845e-54 | -8.615850e-47 |
| Msa0208390 | Msa0698760 | 0.811153 | 8.071124e-51 | -8.615850e-47 |
| Msa0413740 | Msa0698760 | 0.829428 | 5.175233e-55 | -8.615850e-47 |
| Msa0425050 | Msa0698760 | 0.806039 | 9.981723e-50 | -8.615850e-47 |
| Msa0466100 | Msa0698760 | 0.802084 | 6.635274e-49 | -8.615850e-47 |
| Msa0466730 | Msa0698760 | 0.814660 | 1.375963e-51 | -8.615850e-47 |
| Msa0240720 | Msa0698760 | 0.815553 | 8.715879e-52 | -8.615850e-47 |
| Msa0271800 | Msa0698760 | 0.801725 | 7.864526e-49 | -8.615850e-47 |
| Msa0286790 | Msa0698760 | 0.826414 | 2.749133e-54 | -8.615850e-47 |
| Msa0298940 | Msa0698760 | 0.835823 | 1.340940e-56 | -8.615850e-47 |
| Msa0298970 | Msa0698760 | 0.824785 | 6.688375e-54 | -8.615850e-47 |
| Msa0342200 | Msa0698760 | 0.810310 | 1.228172e-50 | -8.615850e-47 |
| Msa0498830 | Msa0698760 | 0.800083 | 1.702370e-48 | -8.615850e-47 |
| Msa0505390 | Msa0698760 | 0.826501 | 2.620673e-54 | -8.615850e-47 |
| Msa0524090 | Msa0698760 | 0.808370 | 3.202102e-50 | -8.615850e-47 |
| Msa0524120 | Msa0698760 | 0.817291 | 3.558971e-52 | -8.615850e-47 |
| Msa0540320 | Msa0698760 | 0.801338 | 9.439107e-49 | -8.615850e-47 |
| Msa0574170 | Msa0698760 | 0.802274 | 6.062840e-49 | -8.615850e-47 |
| Msa0582110 | Msa0698760 | 0.813493 | 2.489362e-51 | -8.615850e-47 |
| Msa0596100 | Msa0698760 | 0.812635 | 3.838770e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0698760 | MtrunA17_Chr4g0052181 | 98.901 | 273 | 3 | 0 | 1 | 273 | 1 | 273 | 0.0 | 551 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0698760 | AT2G34470.1 | 88.710 | 248 | 28 | 0 | 27 | 274 | 28 | 275 | 1.46e-164 | 457 |
| Msa0698760 | AT2G34470.2 | 88.710 | 248 | 28 | 0 | 27 | 274 | 29 | 276 | 2.07e-164 | 457 |
Find 105 sgRNAs with CRISPR-Local
Find 260 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATTTGCTTCTTTGTGAATC+TGG | 0.175946 | 4_4:+69134676 | Msa0698760:CDS |
| AAATTGAATAGACTAATTAA+TGG | 0.238739 | 4_4:-69137977 | None:intergenic |
| ATGTTCTAGTCCCCTAAAAT+AGG | 0.249507 | 4_4:+69138082 | Msa0698760:three_prime_UTR |
| AGCCAGTTCCCTGCTGAAAT+TGG | 0.282236 | 4_4:-69135385 | None:intergenic |
| TAAATATGCACAAGCATATA+TGG | 0.285155 | 4_4:+69137896 | Msa0698760:three_prime_UTR |
| AAGTTCAAAATTAAATATAC+TGG | 0.300092 | 4_4:-69138055 | None:intergenic |
| TTAATTGAGTAATAGCATTA+AGG | 0.303583 | 4_4:+69137998 | Msa0698760:three_prime_UTR |
| CAGTAACAACCAATGGCTTC+TGG | 0.311045 | 4_4:+69134178 | Msa0698760:exon |
| TCATGCAGCGGGACGCTCTT+AGG | 0.322100 | 4_4:+69135656 | Msa0698760:CDS |
| ATTTACATCATAGATGTATC+TGG | 0.342801 | 4_4:+69135417 | Msa0698760:CDS |
| TATAAAAGTGTATGGAACTA+TGG | 0.350428 | 4_4:+69137804 | Msa0698760:three_prime_UTR |
| TCTTGTCGTATTGTTTGAAT+TGG | 0.354381 | 4_4:+69134088 | Msa0698760:five_prime_UTR |
| ATTTGCTTCTTTGTGAATCT+GGG | 0.355601 | 4_4:+69134677 | Msa0698760:CDS |
| TTGAACTCGGATTGGTCAAC+AGG | 0.362943 | 4_4:+69137597 | Msa0698760:three_prime_UTR |
| ACAGCACGTATCCTTTCTTC+AGG | 0.376767 | 4_4:-69134562 | None:intergenic |
| AGCTCTTCTGCTGAAGAATC+CGG | 0.384758 | 4_4:-69134347 | None:intergenic |
| AAACGTGAGACCATCTACTA+TGG | 0.388199 | 4_4:-69134048 | None:intergenic |
| AGATCAGCTTGTGTGATTCC+AGG | 0.402269 | 4_4:-69135468 | None:intergenic |
| GCTTTCACTGTTGGCATTGG+TGG | 0.407273 | 4_4:+69134403 | Msa0698760:CDS |
| AAGCATGGTGATTCATTCAT+AGG | 0.410944 | 4_4:+69134256 | Msa0698760:CDS |
| TTGAAGTCTCTGTTGATAAG+AGG | 0.414084 | 4_4:-69134373 | None:intergenic |
| TGCCAATTTCAGCAGGGAAC+TGG | 0.418166 | 4_4:+69135383 | Msa0698760:CDS |
| ACTGACCTTGCACAAGCAAT+TGG | 0.422106 | 4_4:+69135619 | Msa0698760:CDS |
| GAGGATATTAGTATTAATCT+TGG | 0.429762 | 4_4:+69134619 | Msa0698760:CDS |
| ATCTATCGCCAGTGGTCATT+CGG | 0.436688 | 4_4:+69137757 | Msa0698760:three_prime_UTR |
| CACACATCTATAAAAGTGTA+TGG | 0.439121 | 4_4:+69137796 | Msa0698760:three_prime_UTR |
| GGGGCCATTTGTATTTGCTC+AGG | 0.445112 | 4_4:+69135690 | Msa0698760:CDS |
| AATGAAAGAGCTTTCACTGT+TGG | 0.460936 | 4_4:+69134394 | Msa0698760:CDS |
| ATGACTCATACACACTGATT+AGG | 0.461704 | 4_4:-69137728 | None:intergenic |
| ACAAGCAATTGGAGCTGACT+TGG | 0.465545 | 4_4:+69135630 | Msa0698760:CDS |
| ATTCCAGGACCACCTTTCCT+AGG | 0.479928 | 4_4:-69135453 | None:intergenic |
| AGGATACGTGCTGTTGAAAC+TGG | 0.483161 | 4_4:+69134571 | Msa0698760:CDS |
| ATTCCTAGGAAAGGTGGTCC+TGG | 0.484751 | 4_4:+69135450 | Msa0698760:CDS |
| ACTTGGCTGCCAATTTCAGC+AGG | 0.489264 | 4_4:+69135376 | Msa0698760:CDS |
| TGTGGTCGTGGTCGTGGTCA+TGG | 0.497368 | 4_4:-69134234 | None:intergenic |
| CTAACCTGAGCAAATACAAA+TGG | 0.498076 | 4_4:-69135694 | None:intergenic |
| GTGCAAGACCGTCGTGGCTA+TGG | 0.498501 | 4_4:-69134297 | None:intergenic |
| ATTGGTGGACCTGTCGGTAC+AGG | 0.499612 | 4_4:+69134418 | Msa0698760:CDS |
| CAGGCATGGGAAGCAGCCAC+AGG | 0.500416 | 4_4:+69137538 | Msa0698760:CDS |
| TCAGTTCTCAGTGTACTTTG+AGG | 0.500504 | 4_4:-69134138 | None:intergenic |
| ACGCTCTTAGGATGAGAGAT+GGG | 0.500618 | 4_4:+69135668 | Msa0698760:CDS |
| CATGCTTGTGGTCGTGGTCG+TGG | 0.508140 | 4_4:-69134240 | None:intergenic |
| TGACTTGGGTGTCATGCAGC+GGG | 0.509346 | 4_4:+69135645 | Msa0698760:CDS |
| CTCAGTGTACTTTGAGGACG+AGG | 0.509917 | 4_4:-69134132 | None:intergenic |
| AATCACCATGCTTGTGGTCG+TGG | 0.512675 | 4_4:-69134246 | None:intergenic |
| AAGAATCCGGGAGAGTAGAT+TGG | 0.514564 | 4_4:-69134334 | None:intergenic |
| GATTCATTCATAGGCGCTGA+TGG | 0.520559 | 4_4:+69134265 | Msa0698760:CDS |
| ATAAAGCGTTGCCTGAAGAA+AGG | 0.520668 | 4_4:+69134551 | Msa0698760:CDS |
| CACGAACCAATCTACTCTCC+CGG | 0.524829 | 4_4:+69134328 | Msa0698760:CDS |
| CTGGTGGTGATAAAATTCCT+AGG | 0.528983 | 4_4:+69135436 | Msa0698760:CDS |
| AGAGCTTTCACTGTTGGCAT+TGG | 0.531958 | 4_4:+69134400 | Msa0698760:CDS |
| GGAAGGACTCCCATAGTAGA+TGG | 0.537661 | 4_4:+69134038 | None:intergenic |
| GCTCTTCTGCTGAAGAATCC+GGG | 0.539942 | 4_4:-69134346 | None:intergenic |
| TTTGAAGCATGTTACCACCT+TGG | 0.540138 | 4_4:+69137704 | Msa0698760:three_prime_UTR |
| GGAATGATATATAAGAAAGC+TGG | 0.547268 | 4_4:+69137620 | Msa0698760:three_prime_UTR |
| CGCTCTTAGGATGAGAGATG+GGG | 0.549938 | 4_4:+69135669 | Msa0698760:CDS |
| TATTTATACCGAATGACCAC+TGG | 0.554128 | 4_4:-69137765 | None:intergenic |
| TATTAATCTTGGTCCACTTG+AGG | 0.557139 | 4_4:+69134630 | Msa0698760:CDS |
| CTGACTTGGGTGTCATGCAG+CGG | 0.557266 | 4_4:+69135644 | Msa0698760:CDS |
| GATAAAATTCCTAGGAAAGG+TGG | 0.562010 | 4_4:+69135444 | Msa0698760:CDS |
| AAATGTTGTTGAACTCGGAT+TGG | 0.562865 | 4_4:+69137589 | Msa0698760:three_prime_UTR |
| GACGCTCTTAGGATGAGAGA+TGG | 0.565202 | 4_4:+69135667 | Msa0698760:CDS |
| TTTGCTTCTTTGTGAATCTG+GGG | 0.566680 | 4_4:+69134678 | Msa0698760:CDS |
| TTGCTTCTTTGTGAATCTGG+GGG | 0.567232 | 4_4:+69134679 | Msa0698760:CDS |
| CTAAACTCAGTAACAACCAA+TGG | 0.567810 | 4_4:+69134171 | Msa0698760:exon |
| CGGGAGAGTAGATTGGTTCG+TGG | 0.576489 | 4_4:-69134327 | None:intergenic |
| ATACACACTGATTAGGTCCA+AGG | 0.590007 | 4_4:-69137721 | None:intergenic |
| GAAGCACAATGTTGGAGTAG+AGG | 0.590855 | 4_4:+69137495 | Msa0698760:CDS |
| GTACAGGTGAAGCACAATGT+TGG | 0.592303 | 4_4:+69137487 | Msa0698760:intron |
| GGTGATAAAATTCCTAGGAA+AGG | 0.593250 | 4_4:+69135441 | Msa0698760:CDS |
| CTGGTAGCTCGAGTGAGGAG+TGG | 0.594689 | 4_4:+69137639 | Msa0698760:three_prime_UTR |
| AACGTGAGACCATCTACTAT+GGG | 0.595369 | 4_4:-69134047 | None:intergenic |
| TGATCGCCTCCAGAAGCCAT+TGG | 0.597152 | 4_4:-69134187 | None:intergenic |
| AGGTATCTCGAGATGAGGTG+TGG | 0.598392 | 4_4:-69134112 | None:intergenic |
| GAAAGCTGGTAGCTCGAGTG+AGG | 0.598480 | 4_4:+69137634 | Msa0698760:three_prime_UTR |
| CAGCTCCAATTGCTTGTGCA+AGG | 0.599925 | 4_4:-69135624 | None:intergenic |
| GGGAGAGTAGATTGGTTCGT+GGG | 0.604786 | 4_4:-69134326 | None:intergenic |
| CACGACCACGACCACAAGCA+TGG | 0.605374 | 4_4:+69134241 | Msa0698760:CDS |
| AGATTCGAAAGCTCCTCAAG+TGG | 0.607681 | 4_4:-69134643 | None:intergenic |
| TCCTCATGCTGCTATTCGTG+AGG | 0.609749 | 4_4:+69134600 | Msa0698760:CDS |
| AGCATGTATTTGCTAAATGA+AGG | 0.622992 | 4_4:-69137931 | None:intergenic |
| GAATGAAAAGACAACAGACT+AGG | 0.626713 | 4_4:-69137664 | None:intergenic |
| GTTGGCATTGGTGGACCTGT+CGG | 0.627816 | 4_4:+69134412 | Msa0698760:CDS |
| CAAGCAATTGGAGCTGACTT+GGG | 0.629109 | 4_4:+69135631 | Msa0698760:CDS |
| TCAACGGCGTTTCTTCCCTG+TGG | 0.629714 | 4_4:-69137554 | None:intergenic |
| GCTCTTAGGATGAGAGATGG+GGG | 0.629998 | 4_4:+69135670 | Msa0698760:CDS |
| GTATGGAACTATGGATCACA+TGG | 0.633853 | 4_4:+69137813 | Msa0698760:three_prime_UTR |
| TGAACTCGGATTGGTCAACA+GGG | 0.635365 | 4_4:+69137598 | Msa0698760:three_prime_UTR |
| TAGATTGGTTCGTGGGAGTG+TGG | 0.638881 | 4_4:-69134319 | None:intergenic |
| TGAATGAATCACCATGCTTG+TGG | 0.650133 | 4_4:-69134252 | None:intergenic |
| AGGCATGGGAAGCAGCCACA+GGG | 0.654229 | 4_4:+69137539 | Msa0698760:CDS |
| CTTGGCTGCCAATTTCAGCA+GGG | 0.659539 | 4_4:+69135377 | Msa0698760:CDS |
| TCCTCACGAATAGCAGCATG+AGG | 0.664652 | 4_4:-69134601 | None:intergenic |
| TACGTGCTGTTGAAACTGGT+GGG | 0.667714 | 4_4:+69134575 | Msa0698760:CDS |
| ATACGTGCTGTTGAAACTGG+TGG | 0.670765 | 4_4:+69134574 | Msa0698760:CDS |
| GGACGAGGTATCTCGAGATG+AGG | 0.673371 | 4_4:-69134117 | None:intergenic |
| TACATCATAGATGTATCTGG+TGG | 0.674288 | 4_4:+69135420 | Msa0698760:CDS |
| TAACAACCAATGGCTTCTGG+AGG | 0.679821 | 4_4:+69134181 | Msa0698760:exon |
| ATGCGTCTATCTATCGCCAG+TGG | 0.688987 | 4_4:+69137749 | Msa0698760:three_prime_UTR |
| CTCTTAGGATGAGAGATGGG+GGG | 0.699631 | 4_4:+69135671 | Msa0698760:CDS |
| ACAAAGTGCTAACATCAAAG+CGG | 0.717423 | 4_4:-69134446 | None:intergenic |
| AAAGTGTACCATAGCCACGA+CGG | 0.720385 | 4_4:+69134289 | Msa0698760:CDS |
| CACACTGATTAGGTCCAAGG+TGG | 0.724603 | 4_4:-69137718 | None:intergenic |
| AGTGTGGTGCAAGACCGTCG+TGG | 0.747780 | 4_4:-69134303 | None:intergenic |
| GAACTCGGATTGGTCAACAG+GGG | 0.750854 | 4_4:+69137599 | Msa0698760:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATACAAATTAATGTAATTTA+TGG | - | chr4_4:69136242-69136261 | None:intergenic | 10.0% |
| !!! | AATCATGTATTTTGTATTTT+TGG | + | chr4_4:69134874-69134893 | Msa0698760:intron | 15.0% |
| !! | GTTTGATATAAAAAAAACTT+TGG | + | chr4_4:69135326-69135345 | Msa0698760:intron | 15.0% |
| !!! | ATTTTTGATTTTGATGATTA+TGG | + | chr4_4:69135562-69135581 | Msa0698760:intron | 15.0% |
| !! | TCAAACAAAAATACTAAAAT+AGG | + | chr4_4:69136356-69136375 | Msa0698760:intron | 15.0% |
| !!! | TCTTAGATTTGTTTTTAAAT+AGG | + | chr4_4:69136998-69137017 | Msa0698760:intron | 15.0% |
| !! | AAATTGAATAGACTAATTAA+TGG | - | chr4_4:69137980-69137999 | None:intergenic | 15.0% |
| !! | AAGTTCAAAATTAAATATAC+TGG | - | chr4_4:69138058-69138077 | None:intergenic | 15.0% |
| !! | AAAAATATCATTAGTTACAG+CGG | - | chr4_4:69134500-69134519 | None:intergenic | 20.0% |
| !!! | TTTGATCATATTAGTACTTT+TGG | + | chr4_4:69135098-69135117 | Msa0698760:intron | 20.0% |
| !! | ATAGAACACTTTGAATATTT+GGG | + | chr4_4:69136144-69136163 | Msa0698760:intron | 20.0% |
| !! | TTTCATCTTTCATAATAGTA+AGG | + | chr4_4:69136754-69136773 | Msa0698760:intron | 20.0% |
| !! | ACAATTCAGTTATTTAAACA+GGG | - | chr4_4:69136879-69136898 | None:intergenic | 20.0% |
| !! | AACAATTCAGTTATTTAAAC+AGG | - | chr4_4:69136880-69136899 | None:intergenic | 20.0% |
| !! | TATAAGCAGAAGTAAAATTT+GGG | - | chr4_4:69137185-69137204 | None:intergenic | 20.0% |
| !! | ATATAAGCAGAAGTAAAATT+TGG | - | chr4_4:69137186-69137205 | None:intergenic | 20.0% |
| !! | ATATAACTATTTAGTAGAAC+TGG | + | chr4_4:69137202-69137221 | Msa0698760:intron | 20.0% |
| !! | TAACAAGAGTAGTAAAATAT+TGG | - | chr4_4:69137448-69137467 | None:intergenic | 20.0% |
| !!! | ATTTTTCAAAGAAATGTCAA+CGG | - | chr4_4:69137573-69137592 | None:intergenic | 20.0% |
| !! | TTAATTGAGTAATAGCATTA+AGG | + | chr4_4:69137998-69138017 | Msa0698760:three_prime_UTR | 20.0% |
| !!! | GATATTTTTACCAAAGAAGA+TGG | + | chr4_4:69134511-69134530 | Msa0698760:CDS | 25.0% |
| ! | GAGGATATTAGTATTAATCT+TGG | + | chr4_4:69134619-69134638 | Msa0698760:CDS | 25.0% |
| ! | AATACAAAATACATGATTCG+TGG | - | chr4_4:69134872-69134891 | None:intergenic | 25.0% |
| !!! | TTGTATTTTTGGTTTCATAG+TGG | + | chr4_4:69134885-69134904 | Msa0698760:intron | 25.0% |
| !!! | TGTATTTTTGGTTTCATAGT+GGG | + | chr4_4:69134886-69134905 | Msa0698760:intron | 25.0% |
| ! | ACTAATTCGATCAATTGTTA+CGG | + | chr4_4:69135156-69135175 | Msa0698760:intron | 25.0% |
| ! | ATTTACATCATAGATGTATC+TGG | + | chr4_4:69135417-69135436 | Msa0698760:CDS | 25.0% |
| !! | TTGATGATTATGGAACTAAT+TGG | + | chr4_4:69135572-69135591 | Msa0698760:intron | 25.0% |
| ! | AACTAATTGGACTTAATTTC+AGG | + | chr4_4:69135585-69135604 | Msa0698760:intron | 25.0% |
| ! | ATATTAACAGGCATTAACTT+GGG | - | chr4_4:69135907-69135926 | None:intergenic | 25.0% |
| ! | AATATTAACAGGCATTAACT+TGG | - | chr4_4:69135908-69135927 | None:intergenic | 25.0% |
| ! | TTAATGCCTGTTAATATTGT+TGG | + | chr4_4:69135910-69135929 | Msa0698760:intron | 25.0% |
| ! | TAATGCCTGTTAATATTGTT+GGG | + | chr4_4:69135911-69135930 | Msa0698760:intron | 25.0% |
| !! | GTTCTATCTGATTTGATAAA+GGG | - | chr4_4:69136131-69136150 | None:intergenic | 25.0% |
| !! | TGTTCTATCTGATTTGATAA+AGG | - | chr4_4:69136132-69136151 | None:intergenic | 25.0% |
| ! | GATAGAACACTTTGAATATT+TGG | + | chr4_4:69136143-69136162 | Msa0698760:intron | 25.0% |
| !!! | TATAATGATGAGAGTATTTG+AGG | + | chr4_4:69136259-69136278 | Msa0698760:intron | 25.0% |
| !! | TTTGCATTAACTTTTGTAGA+TGG | - | chr4_4:69136287-69136306 | None:intergenic | 25.0% |
| ! | TACTAAAATAGGTTGTTTGA+TGG | + | chr4_4:69136367-69136386 | Msa0698760:intron | 25.0% |
| ! | TATACATTAGGTTTGTATCT+TGG | + | chr4_4:69136467-69136486 | Msa0698760:intron | 25.0% |
| ! | TTTCTACTCAACATTTAAGA+TGG | - | chr4_4:69136523-69136542 | None:intergenic | 25.0% |
| ! | TCTCTTTCAAATTTATTACC+TGG | - | chr4_4:69136555-69136574 | None:intergenic | 25.0% |
| ! | CAGTAATTTGAGAAATAACA+TGG | - | chr4_4:69136613-69136632 | None:intergenic | 25.0% |
| !!! | CATGTTATTTCTCAAATTAC+TGG | + | chr4_4:69136611-69136630 | Msa0698760:intron | 25.0% |
| ! | AAAAGGAAAGGAAATTAACA+CGG | - | chr4_4:69136656-69136675 | None:intergenic | 25.0% |
| ! | GAATGGTATTTATACAAGAT+GGG | - | chr4_4:69136705-69136724 | None:intergenic | 25.0% |
| !!! | CTATACATGATTTTAAGGTT+AGG | - | chr4_4:69136803-69136822 | None:intergenic | 25.0% |
| ! | TCTGATATAAATTCTGATTG+TGG | - | chr4_4:69136923-69136942 | None:intergenic | 25.0% |
| ! | AAATTGATTGATAGATCGAT+TGG | + | chr4_4:69136955-69136974 | Msa0698760:intron | 25.0% |
| ! | GAGTATTTATGATTGAAAGT+TGG | + | chr4_4:69137028-69137047 | Msa0698760:intron | 25.0% |
| ! | GAGTATTTATGATTGAAAGT+TGG | + | chr4_4:69137028-69137047 | Msa0698760:intron | 25.0% |
| ! | TGATTTATAGAAGTGAATCA+AGG | + | chr4_4:69137135-69137154 | Msa0698760:intron | 25.0% |
| ! | AAAAAAATCGCTGTGATATA+AGG | - | chr4_4:69137347-69137366 | None:intergenic | 25.0% |
| !!! | TTATATCACAGCGATTTTTT+TGG | + | chr4_4:69137346-69137365 | Msa0698760:intron | 25.0% |
| !!! | TATATCACAGCGATTTTTTT+GGG | + | chr4_4:69137347-69137366 | Msa0698760:intron | 25.0% |
| ! | CGTTATTTGTAATACAAGAA+AGG | - | chr4_4:69137417-69137436 | None:intergenic | 25.0% |
| ! | AAGAGTAGTAAAATATTGGT+GGG | - | chr4_4:69137444-69137463 | None:intergenic | 25.0% |
| !! | AATTGTGAATCATGTTTTAC+AGG | + | chr4_4:69137519-69137538 | Msa0698760:CDS | 25.0% |
| ! | TTGAAAAATGTTGTTGAACT+CGG | + | chr4_4:69137584-69137603 | Msa0698760:three_prime_UTR | 25.0% |
| !! | TATAAAAGTGTATGGAACTA+TGG | + | chr4_4:69137804-69137823 | Msa0698760:three_prime_UTR | 25.0% |
| ! | TAAATATGCACAAGCATATA+TGG | + | chr4_4:69137896-69137915 | Msa0698760:three_prime_UTR | 25.0% |
| TCTTGTCGTATTGTTTGAAT+TGG | + | chr4_4:69134088-69134107 | Msa0698760:five_prime_UTR | 30.0% | |
| ATTTGCTTCTTTGTGAATCT+GGG | + | chr4_4:69134677-69134696 | Msa0698760:CDS | 30.0% | |
| TGTTTGATATCACAATGGTT+TGG | + | chr4_4:69134806-69134825 | Msa0698760:intron | 30.0% | |
| !!! | GTTTGGTTTTGCCAAAATTA+TGG | + | chr4_4:69134823-69134842 | Msa0698760:intron | 30.0% |
| ! | AACACTGAACACCATAATTT+TGG | - | chr4_4:69134837-69134856 | None:intergenic | 30.0% |
| TGTAAAAATCTTTACGTGTC+TGG | - | chr4_4:69134929-69134948 | None:intergenic | 30.0% | |
| AATGTGAAGTGGTTTATGTT+TGG | - | chr4_4:69134991-69135010 | None:intergenic | 30.0% | |
| AAAGTGAGTTAAATGTGAAG+TGG | - | chr4_4:69135002-69135021 | None:intergenic | 30.0% | |
| CAAGCACATTCTTAATCTAT+AGG | + | chr4_4:69135065-69135084 | Msa0698760:intron | 30.0% | |
| GGAATAGTTTGATCTACAAT+TGG | + | chr4_4:69135181-69135200 | Msa0698760:intron | 30.0% | |
| !! | CATTTTAGTCCTGAAATTGT+AGG | - | chr4_4:69135262-69135281 | None:intergenic | 30.0% |
| ! | TTTTGTGTATAGCACTTACA+AGG | - | chr4_4:69135494-69135513 | None:intergenic | 30.0% |
| TTTCTTTCTTGCAATCTTTG+TGG | + | chr4_4:69135736-69135755 | Msa0698760:intron | 30.0% | |
| !!! | CAATGTTTTAGAAACCAAAC+CGG | + | chr4_4:69135944-69135963 | Msa0698760:intron | 30.0% |
| !!! | CAATGTTTTGAAAACCAAAC+TGG | - | chr4_4:69136100-69136119 | None:intergenic | 30.0% |
| ! | TTTGATGGACAATATGCTTA+GGG | - | chr4_4:69136416-69136435 | None:intergenic | 30.0% |
| !! | TTTTGATGGACAATATGCTT+AGG | - | chr4_4:69136417-69136436 | None:intergenic | 30.0% |
| TCCATCAAAAAATTGCATGT+TGG | + | chr4_4:69136427-69136446 | Msa0698760:intron | 30.0% | |
| !!! | TCCAACATGCAATTTTTTGA+TGG | - | chr4_4:69136431-69136450 | None:intergenic | 30.0% |
| AATGTTGAGTAGAAAACAAC+TGG | + | chr4_4:69136528-69136547 | Msa0698760:intron | 30.0% | |
| !! | AGAAGGCATTCATTATTCTT+GGG | - | chr4_4:69136588-69136607 | None:intergenic | 30.0% |
| !! | AAGAAGGCATTCATTATTCT+TGG | - | chr4_4:69136589-69136608 | None:intergenic | 30.0% |
| TGAGAAATAACATGGAAAGA+AGG | - | chr4_4:69136605-69136624 | None:intergenic | 30.0% | |
| GGAATGGTATTTATACAAGA+TGG | - | chr4_4:69136706-69136725 | None:intergenic | 30.0% | |
| TTCAGAATACACTCAACAAT+GGG | - | chr4_4:69136727-69136746 | None:intergenic | 30.0% | |
| ! | TGTGGCTATACATGATTTTA+AGG | - | chr4_4:69136808-69136827 | None:intergenic | 30.0% |
| TGGAAAGAAACAAAATACTG+TGG | + | chr4_4:69137234-69137253 | Msa0698760:intron | 30.0% | |
| GGAAAGAAACAAAATACTGT+GGG | + | chr4_4:69137235-69137254 | Msa0698760:intron | 30.0% | |
| GCTTCTTAGTAACATCTATA+AGG | + | chr4_4:69137266-69137285 | Msa0698760:intron | 30.0% | |
| CAAGAGTAGTAAAATATTGG+TGG | - | chr4_4:69137445-69137464 | None:intergenic | 30.0% | |
| GGAATGATATATAAGAAAGC+TGG | + | chr4_4:69137620-69137639 | Msa0698760:three_prime_UTR | 30.0% | |
| ! | CACACATCTATAAAAGTGTA+TGG | + | chr4_4:69137796-69137815 | Msa0698760:three_prime_UTR | 30.0% |
| ! | AGCATGTATTTGCTAAATGA+AGG | - | chr4_4:69137934-69137953 | None:intergenic | 30.0% |
| CTAAACTCAGTAACAACCAA+TGG | + | chr4_4:69134171-69134190 | Msa0698760:exon | 35.0% | |
| AAGCATGGTGATTCATTCAT+AGG | + | chr4_4:69134256-69134275 | Msa0698760:CDS | 35.0% | |
| ! | TTGAAGTCTCTGTTGATAAG+AGG | - | chr4_4:69134376-69134395 | None:intergenic | 35.0% |
| AATGAAAGAGCTTTCACTGT+TGG | + | chr4_4:69134394-69134413 | Msa0698760:CDS | 35.0% | |
| ! | ACAAAGTGCTAACATCAAAG+CGG | - | chr4_4:69134449-69134468 | None:intergenic | 35.0% |
| CAAAAACTCACCATCTTCTT+TGG | - | chr4_4:69134524-69134543 | None:intergenic | 35.0% | |
| ! | CAAAGAAGATGGTGAGTTTT+TGG | + | chr4_4:69134522-69134541 | Msa0698760:CDS | 35.0% |
| TATTAATCTTGGTCCACTTG+AGG | + | chr4_4:69134630-69134649 | Msa0698760:CDS | 35.0% | |
| ! | GATTTGCTTCTTTGTGAATC+TGG | + | chr4_4:69134676-69134695 | Msa0698760:CDS | 35.0% |
| TTTGCTTCTTTGTGAATCTG+GGG | + | chr4_4:69134678-69134697 | Msa0698760:CDS | 35.0% | |
| GTGTGTGTTTGATATCACAA+TGG | + | chr4_4:69134801-69134820 | Msa0698760:intron | 35.0% | |
| CAAAATACATGATTCGTGGT+GGG | - | chr4_4:69134868-69134887 | None:intergenic | 35.0% | |
| ACAAAATACATGATTCGTGG+TGG | - | chr4_4:69134869-69134888 | None:intergenic | 35.0% | |
| ATTCGATCAATTGTTACGGA+TGG | + | chr4_4:69135160-69135179 | Msa0698760:intron | 35.0% | |
| TATCTGACACCTACAATTTC+AGG | + | chr4_4:69135250-69135269 | Msa0698760:intron | 35.0% | |
| ! | CAGTTTTTGTGCAGATAACT+TGG | + | chr4_4:69135359-69135378 | Msa0698760:intron | 35.0% |
| TACATCATAGATGTATCTGG+TGG | + | chr4_4:69135420-69135439 | Msa0698760:CDS | 35.0% | |
| GGTGATAAAATTCCTAGGAA+AGG | + | chr4_4:69135441-69135460 | Msa0698760:CDS | 35.0% | |
| GATAAAATTCCTAGGAAAGG+TGG | + | chr4_4:69135444-69135463 | Msa0698760:CDS | 35.0% | |
| GCTATACACAAAACTATCTC+TGG | + | chr4_4:69135501-69135520 | Msa0698760:intron | 35.0% | |
| CTAACCTGAGCAAATACAAA+TGG | - | chr4_4:69135697-69135716 | None:intergenic | 35.0% | |
| !! | GTATTTGCTCAGGTTAGTTT+AGG | + | chr4_4:69135700-69135719 | Msa0698760:intron | 35.0% |
| GATGACCCAACAATATTAAC+AGG | - | chr4_4:69135919-69135938 | None:intergenic | 35.0% | |
| !! | CGGTTTGGTTTCTAAAACAT+TGG | - | chr4_4:69135946-69135965 | None:intergenic | 35.0% |
| GAGATTTCCAATTTGATGTC+CGG | - | chr4_4:69135966-69135985 | None:intergenic | 35.0% | |
| GACATCAAATTGGAAATCTC+CGG | + | chr4_4:69135966-69135985 | Msa0698760:intron | 35.0% | |
| ACATCAAATTGGAAATCTCC+GGG | + | chr4_4:69135967-69135986 | Msa0698760:intron | 35.0% | |
| GCTATGGTTCAGTTATATGA+AGG | - | chr4_4:69136045-69136064 | None:intergenic | 35.0% | |
| !!! | GTTTTGAAAACCAAACTGGA+CGG | - | chr4_4:69136096-69136115 | None:intergenic | 35.0% |
| GAACACTTTGAATATTTGGG+AGG | + | chr4_4:69136147-69136166 | Msa0698760:intron | 35.0% | |
| CATGTTGGATTTAGTTGAGT+TGG | + | chr4_4:69136442-69136461 | Msa0698760:intron | 35.0% | |
| !! | GTTGAGTTGGCATATACATT+AGG | + | chr4_4:69136455-69136474 | Msa0698760:intron | 35.0% |
| AACAGAGAAGCAAAAAGGAA+AGG | - | chr4_4:69136668-69136687 | None:intergenic | 35.0% | |
| AATACACTCAACAATGGGAA+TGG | - | chr4_4:69136722-69136741 | None:intergenic | 35.0% | |
| CTTCAGAATACACTCAACAA+TGG | - | chr4_4:69136728-69136747 | None:intergenic | 35.0% | |
| GGTCATTCACGTTGTATTAA+TGG | - | chr4_4:69136782-69136801 | None:intergenic | 35.0% | |
| TTGATTGATAGATCGATTGG+TGG | + | chr4_4:69136958-69136977 | Msa0698760:intron | 35.0% | |
| GTGATATAAGGTGAGTGATT+TGG | - | chr4_4:69137335-69137354 | None:intergenic | 35.0% | |
| GTCATGTAAAGAATGCTGTT+AGG | - | chr4_4:69137395-69137414 | None:intergenic | 35.0% | |
| ATCTTTCTGCATCAATGTAC+AGG | + | chr4_4:69137471-69137490 | Msa0698760:intron | 35.0% | |
| ! | TGAATCATGTTTTACAGGCA+TGG | + | chr4_4:69137524-69137543 | Msa0698760:CDS | 35.0% |
| ! | GAATCATGTTTTACAGGCAT+GGG | + | chr4_4:69137525-69137544 | Msa0698760:CDS | 35.0% |
| AAATGTTGTTGAACTCGGAT+TGG | + | chr4_4:69137589-69137608 | Msa0698760:three_prime_UTR | 35.0% | |
| GAATGAAAAGACAACAGACT+AGG | - | chr4_4:69137667-69137686 | None:intergenic | 35.0% | |
| ! | ATGACTCATACACACTGATT+AGG | - | chr4_4:69137731-69137750 | None:intergenic | 35.0% |
| TATTTATACCGAATGACCAC+TGG | - | chr4_4:69137768-69137787 | None:intergenic | 35.0% | |
| AACGTGAGACCATCTACTAT+GGG | - | chr4_4:69134050-69134069 | None:intergenic | 40.0% | |
| AAACGTGAGACCATCTACTA+TGG | - | chr4_4:69134051-69134070 | None:intergenic | 40.0% | |
| TCAGTTCTCAGTGTACTTTG+AGG | - | chr4_4:69134141-69134160 | None:intergenic | 40.0% | |
| TGAATGAATCACCATGCTTG+TGG | - | chr4_4:69134255-69134274 | None:intergenic | 40.0% | |
| !! | ATAAAGCGTTGCCTGAAGAA+AGG | + | chr4_4:69134551-69134570 | Msa0698760:CDS | 40.0% |
| TTGCTTCTTTGTGAATCTGG+GGG | + | chr4_4:69134679-69134698 | Msa0698760:CDS | 40.0% | |
| GTTCCTAAAATTGTCGCGTA+TGG | + | chr4_4:69135133-69135152 | Msa0698760:intron | 40.0% | |
| ! | AGTCCATACGCGACAATTTT+AGG | - | chr4_4:69135139-69135158 | None:intergenic | 40.0% |
| ! | CTGGTGGTGATAAAATTCCT+AGG | + | chr4_4:69135436-69135455 | Msa0698760:CDS | 40.0% |
| ATTCAGATTCTCTGCAGTCA+GGG | + | chr4_4:69135779-69135798 | Msa0698760:intron | 40.0% | |
| TTGTCCGATCAAAGATCAGA+TGG | + | chr4_4:69135836-69135855 | Msa0698760:intron | 40.0% | |
| CAAGCCATCTGATCTTTGAT+CGG | - | chr4_4:69135843-69135862 | None:intergenic | 40.0% | |
| ! | ACAGGCATTAACTTGGGAAT+TGG | - | chr4_4:69135901-69135920 | None:intergenic | 40.0% |
| AACCAAACCGGACATCAAAT+TGG | + | chr4_4:69135956-69135975 | Msa0698760:intron | 40.0% | |
| TTCCAATTTGATGTCCGGTT+TGG | - | chr4_4:69135961-69135980 | None:intergenic | 40.0% | |
| TTTGAACCGAGATTGAAGTG+CGG | + | chr4_4:69136014-69136033 | Msa0698760:intron | 40.0% | |
| TCAATTGACTGAACTGTGCA+CGG | - | chr4_4:69136072-69136091 | None:intergenic | 40.0% | |
| CTTTGAATATTTGGGAGGAG+CGG | + | chr4_4:69136152-69136171 | Msa0698760:intron | 40.0% | |
| CTTTGCTAATCGATGATTGC+TGG | + | chr4_4:69136201-69136220 | Msa0698760:intron | 40.0% | |
| AGGCATTCATTATTCTTGGG+AGG | - | chr4_4:69136585-69136604 | None:intergenic | 40.0% | |
| AGCTCAACAGAGAAGCAAAA+AGG | - | chr4_4:69136673-69136692 | None:intergenic | 40.0% | |
| !! | CAAAATGCTCAGTGGTTTTG+TGG | - | chr4_4:69136826-69136845 | None:intergenic | 40.0% |
| ! | ATTTTGCCTTGGTATCTGGT+TGG | + | chr4_4:69136840-69136859 | Msa0698760:intron | 40.0% |
| ! | AGTAGAACTGGTTCAGAACA+TGG | + | chr4_4:69137214-69137233 | Msa0698760:intron | 40.0% |
| ! | TTTGAAGCATGTTACCACCT+TGG | + | chr4_4:69137704-69137723 | Msa0698760:three_prime_UTR | 40.0% |
| ! | ATACACACTGATTAGGTCCA+AGG | - | chr4_4:69137724-69137743 | None:intergenic | 40.0% |
| GTATGGAACTATGGATCACA+TGG | + | chr4_4:69137813-69137832 | Msa0698760:three_prime_UTR | 40.0% | |
| CAGTAACAACCAATGGCTTC+TGG | + | chr4_4:69134178-69134197 | Msa0698760:exon | 45.0% | |
| TAACAACCAATGGCTTCTGG+AGG | + | chr4_4:69134181-69134200 | Msa0698760:exon | 45.0% | |
| !! | GATTCATTCATAGGCGCTGA+TGG | + | chr4_4:69134265-69134284 | Msa0698760:CDS | 45.0% |
| AAAGTGTACCATAGCCACGA+CGG | + | chr4_4:69134289-69134308 | Msa0698760:CDS | 45.0% | |
| AAGAATCCGGGAGAGTAGAT+TGG | - | chr4_4:69134337-69134356 | None:intergenic | 45.0% | |
| AGCTCTTCTGCTGAAGAATC+CGG | - | chr4_4:69134350-69134369 | None:intergenic | 45.0% | |
| AGAGCTTTCACTGTTGGCAT+TGG | + | chr4_4:69134400-69134419 | Msa0698760:CDS | 45.0% | |
| ACAGCACGTATCCTTTCTTC+AGG | - | chr4_4:69134565-69134584 | None:intergenic | 45.0% | |
| ! | AGGATACGTGCTGTTGAAAC+TGG | + | chr4_4:69134571-69134590 | Msa0698760:CDS | 45.0% |
| ! | ATACGTGCTGTTGAAACTGG+TGG | + | chr4_4:69134574-69134593 | Msa0698760:CDS | 45.0% |
| ! | TACGTGCTGTTGAAACTGGT+GGG | + | chr4_4:69134575-69134594 | Msa0698760:CDS | 45.0% |
| AGATTCGAAAGCTCCTCAAG+TGG | - | chr4_4:69134646-69134665 | None:intergenic | 45.0% | |
| AGATCAGCTTGTGTGATTCC+AGG | - | chr4_4:69135471-69135490 | None:intergenic | 45.0% | |
| ACTGACCTTGCACAAGCAAT+TGG | + | chr4_4:69135619-69135638 | Msa0698760:CDS | 45.0% | |
| ACAAGCAATTGGAGCTGACT+TGG | + | chr4_4:69135630-69135649 | Msa0698760:CDS | 45.0% | |
| ! | CAAGCAATTGGAGCTGACTT+GGG | + | chr4_4:69135631-69135650 | Msa0698760:CDS | 45.0% |
| ACGCTCTTAGGATGAGAGAT+GGG | + | chr4_4:69135668-69135687 | Msa0698760:CDS | 45.0% | |
| GCAGAGAATCTGAATCTTGC+TGG | - | chr4_4:69135774-69135793 | None:intergenic | 45.0% | |
| GATTCAGATTCTCTGCAGTC+AGG | + | chr4_4:69135778-69135797 | Msa0698760:intron | 45.0% | |
| CGATCAAAGATCAGATGGCT+TGG | + | chr4_4:69135841-69135860 | Msa0698760:intron | 45.0% | |
| AATTGGAAATCTCCGGGTCA+TGG | + | chr4_4:69135973-69135992 | Msa0698760:intron | 45.0% | |
| AAAGCAGTTGAACCATGACC+CGG | - | chr4_4:69135988-69136007 | None:intergenic | 45.0% | |
| GTTCAACCGCACTTCAATCT+CGG | - | chr4_4:69136023-69136042 | None:intergenic | 45.0% | |
| GTCAATTGAACCGTCCAGTT+TGG | + | chr4_4:69136083-69136102 | Msa0698760:intron | 45.0% | |
| AATATTTGGGAGGAGCGGTA+GGG | + | chr4_4:69136157-69136176 | Msa0698760:intron | 45.0% | |
| TGCTAATCGATGATTGCTGG+AGG | + | chr4_4:69136204-69136223 | Msa0698760:intron | 45.0% | |
| GAGTAGAAAACAACTGGTCC+AGG | + | chr4_4:69136534-69136553 | Msa0698760:intron | 45.0% | |
| ! | AACCACTGAGCATTTTGCCT+TGG | + | chr4_4:69136829-69136848 | Msa0698760:intron | 45.0% |
| TACCAAGGCAAAATGCTCAG+TGG | - | chr4_4:69136834-69136853 | None:intergenic | 45.0% | |
| ! | GAGCATTTTGCCTTGGTATC+TGG | + | chr4_4:69136836-69136855 | Msa0698760:intron | 45.0% |
| GCAATTCCAACCAGATACCA+AGG | - | chr4_4:69136849-69136868 | None:intergenic | 45.0% | |
| CAAAATACTGTGGGCGAGTT+AGG | + | chr4_4:69137244-69137263 | Msa0698760:intron | 45.0% | |
| GTACAGGTGAAGCACAATGT+TGG | + | chr4_4:69137487-69137506 | Msa0698760:intron | 45.0% | |
| GAAGCACAATGTTGGAGTAG+AGG | + | chr4_4:69137495-69137514 | Msa0698760:CDS | 45.0% | |
| !! | TTGAACTCGGATTGGTCAAC+AGG | + | chr4_4:69137597-69137616 | Msa0698760:three_prime_UTR | 45.0% |
| !! | TGAACTCGGATTGGTCAACA+GGG | + | chr4_4:69137598-69137617 | Msa0698760:three_prime_UTR | 45.0% |
| ATCTATCGCCAGTGGTCATT+CGG | + | chr4_4:69137757-69137776 | Msa0698760:three_prime_UTR | 45.0% | |
| AGGTATCTCGAGATGAGGTG+TGG | - | chr4_4:69134115-69134134 | None:intergenic | 50.0% | |
| ! | CTCAGTGTACTTTGAGGACG+AGG | - | chr4_4:69134135-69134154 | None:intergenic | 50.0% |
| AATCACCATGCTTGTGGTCG+TGG | - | chr4_4:69134249-69134268 | None:intergenic | 50.0% | |
| !! | TAGATTGGTTCGTGGGAGTG+TGG | - | chr4_4:69134322-69134341 | None:intergenic | 50.0% |
| !! | GGGAGAGTAGATTGGTTCGT+GGG | - | chr4_4:69134329-69134348 | None:intergenic | 50.0% |
| CACGAACCAATCTACTCTCC+CGG | + | chr4_4:69134328-69134347 | Msa0698760:CDS | 50.0% | |
| GCTCTTCTGCTGAAGAATCC+GGG | - | chr4_4:69134349-69134368 | None:intergenic | 50.0% | |
| ! | GCTTTCACTGTTGGCATTGG+TGG | + | chr4_4:69134403-69134422 | Msa0698760:CDS | 50.0% |
| TCCTCATGCTGCTATTCGTG+AGG | + | chr4_4:69134600-69134619 | Msa0698760:CDS | 50.0% | |
| TCCTCACGAATAGCAGCATG+AGG | - | chr4_4:69134604-69134623 | None:intergenic | 50.0% | |
| CTTCTTTGTGAATCTGGGGG+AGG | + | chr4_4:69134682-69134701 | Msa0698760:CDS | 50.0% | |
| ACTTGGCTGCCAATTTCAGC+AGG | + | chr4_4:69135376-69135395 | Msa0698760:CDS | 50.0% | |
| CTTGGCTGCCAATTTCAGCA+GGG | + | chr4_4:69135377-69135396 | Msa0698760:CDS | 50.0% | |
| TGCCAATTTCAGCAGGGAAC+TGG | + | chr4_4:69135383-69135402 | Msa0698760:CDS | 50.0% | |
| AGCCAGTTCCCTGCTGAAAT+TGG | - | chr4_4:69135388-69135407 | None:intergenic | 50.0% | |
| ATTCCTAGGAAAGGTGGTCC+TGG | + | chr4_4:69135450-69135469 | Msa0698760:CDS | 50.0% | |
| ATTCCAGGACCACCTTTCCT+AGG | - | chr4_4:69135456-69135475 | None:intergenic | 50.0% | |
| CAGCTCCAATTGCTTGTGCA+AGG | - | chr4_4:69135627-69135646 | None:intergenic | 50.0% | |
| GACGCTCTTAGGATGAGAGA+TGG | + | chr4_4:69135667-69135686 | Msa0698760:CDS | 50.0% | |
| CGCTCTTAGGATGAGAGATG+GGG | + | chr4_4:69135669-69135688 | Msa0698760:CDS | 50.0% | |
| GCTCTTAGGATGAGAGATGG+GGG | + | chr4_4:69135670-69135689 | Msa0698760:CDS | 50.0% | |
| CTCTTAGGATGAGAGATGGG+GGG | + | chr4_4:69135671-69135690 | Msa0698760:CDS | 50.0% | |
| GGGGCCATTTGTATTTGCTC+AGG | + | chr4_4:69135690-69135709 | Msa0698760:CDS | 50.0% | |
| ! | AGATGGCTTGGATCGCTTGA+TGG | + | chr4_4:69135853-69135872 | Msa0698760:intron | 50.0% |
| GAATTGGATCGCCTGAAGTC+GGG | - | chr4_4:69135885-69135904 | None:intergenic | 50.0% | |
| GGAATTGGATCGCCTGAAGT+CGG | - | chr4_4:69135886-69135905 | None:intergenic | 50.0% | |
| GAATATTTGGGAGGAGCGGT+AGG | + | chr4_4:69136156-69136175 | Msa0698760:intron | 50.0% | |
| !! | GAACTCGGATTGGTCAACAG+GGG | + | chr4_4:69137599-69137618 | Msa0698760:three_prime_UTR | 50.0% |
| ! | CACACTGATTAGGTCCAAGG+TGG | - | chr4_4:69137721-69137740 | None:intergenic | 50.0% |
| ATGCGTCTATCTATCGCCAG+TGG | + | chr4_4:69137749-69137768 | Msa0698760:three_prime_UTR | 50.0% | |
| ! | GGACGAGGTATCTCGAGATG+AGG | - | chr4_4:69134120-69134139 | None:intergenic | 55.0% |
| TGATCGCCTCCAGAAGCCAT+TGG | - | chr4_4:69134190-69134209 | None:intergenic | 55.0% | |
| !! | CGGGAGAGTAGATTGGTTCG+TGG | - | chr4_4:69134330-69134349 | None:intergenic | 55.0% |
| !! | GTTGGCATTGGTGGACCTGT+CGG | + | chr4_4:69134412-69134431 | Msa0698760:CDS | 55.0% |
| ! | ATTGGTGGACCTGTCGGTAC+AGG | + | chr4_4:69134418-69134437 | Msa0698760:CDS | 55.0% |
| !! | CTGACTTGGGTGTCATGCAG+CGG | + | chr4_4:69135644-69135663 | Msa0698760:CDS | 55.0% |
| ! | TGACTTGGGTGTCATGCAGC+GGG | + | chr4_4:69135645-69135664 | Msa0698760:CDS | 55.0% |
| AGTCACGTAGCCAGCACGTA+AGG | + | chr4_4:69135811-69135830 | Msa0698760:intron | 55.0% | |
| TCGGACAACTCCTTACGTGC+TGG | - | chr4_4:69135824-69135843 | None:intergenic | 55.0% | |
| ! | TGGCTTGGATCGCTTGATGG+AGG | + | chr4_4:69135856-69135875 | Msa0698760:intron | 55.0% |
| GGCTTGGATCGCTTGATGGA+GGG | + | chr4_4:69135857-69135876 | Msa0698760:intron | 55.0% | |
| AACTGTGCACGGCACTGCTA+TGG | - | chr4_4:69136061-69136080 | None:intergenic | 55.0% | |
| AGGGCAGCTGCTTAGCTGTT+TGG | - | chr4_4:69136397-69136416 | None:intergenic | 55.0% | |
| TCAACGGCGTTTCTTCCCTG+TGG | - | chr4_4:69137557-69137576 | None:intergenic | 55.0% | |
| GAAAGCTGGTAGCTCGAGTG+AGG | + | chr4_4:69137634-69137653 | Msa0698760:three_prime_UTR | 55.0% | |
| TGTGGTCGTGGTCGTGGTCA+TGG | - | chr4_4:69134237-69134256 | None:intergenic | 60.0% | |
| CATGCTTGTGGTCGTGGTCG+TGG | - | chr4_4:69134243-69134262 | None:intergenic | 60.0% | |
| CACGACCACGACCACAAGCA+TGG | + | chr4_4:69134241-69134260 | Msa0698760:CDS | 60.0% | |
| GTGCAAGACCGTCGTGGCTA+TGG | - | chr4_4:69134300-69134319 | None:intergenic | 60.0% | |
| AGTGTGGTGCAAGACCGTCG+TGG | - | chr4_4:69134306-69134325 | None:intergenic | 60.0% | |
| !! | GCGGTTTTGCCTGTACCGAC+AGG | - | chr4_4:69134430-69134449 | None:intergenic | 60.0% |
| TCATGCAGCGGGACGCTCTT+AGG | + | chr4_4:69135656-69135675 | Msa0698760:CDS | 60.0% | |
| !! | GATGGAGGGTACCCGACTTC+AGG | + | chr4_4:69135871-69135890 | Msa0698760:intron | 60.0% |
| AGGCATGGGAAGCAGCCACA+GGG | + | chr4_4:69137539-69137558 | Msa0698760:CDS | 60.0% | |
| CTGGTAGCTCGAGTGAGGAG+TGG | + | chr4_4:69137639-69137658 | Msa0698760:three_prime_UTR | 60.0% | |
| CAGGCATGGGAAGCAGCCAC+AGG | + | chr4_4:69137538-69137557 | Msa0698760:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 69134042 | 69138101 | 69134042 | ID=Msa0698760;Name=Msa0698760 |
| chr4_4 | mRNA | 69134042 | 69138101 | 69134042 | ID=Msa0698760-mRNA-1;Parent=Msa0698760;Name=Msa0698760-mRNA-1;_AED=0.03;_eAED=0.03;_QI=148|1|1|1|1|1|4|525|274 |
| chr4_4 | exon | 69134042 | 69134703 | 69134042 | ID=Msa0698760-mRNA-1:exon:20653;Parent=Msa0698760-mRNA-1 |
| chr4_4 | exon | 69135373 | 69135494 | 69135373 | ID=Msa0698760-mRNA-1:exon:20654;Parent=Msa0698760-mRNA-1 |
| chr4_4 | exon | 69135607 | 69135711 | 69135607 | ID=Msa0698760-mRNA-1:exon:20655;Parent=Msa0698760-mRNA-1 |
| chr4_4 | exon | 69137493 | 69138101 | 69137493 | ID=Msa0698760-mRNA-1:exon:20656;Parent=Msa0698760-mRNA-1 |
| chr4_4 | five_prime_UTR | 69134042 | 69134189 | 69134042 | ID=Msa0698760-mRNA-1:five_prime_utr;Parent=Msa0698760-mRNA-1 |
| chr4_4 | CDS | 69134190 | 69134703 | 69134190 | ID=Msa0698760-mRNA-1:cds;Parent=Msa0698760-mRNA-1 |
| chr4_4 | CDS | 69135373 | 69135494 | 69135373 | ID=Msa0698760-mRNA-1:cds;Parent=Msa0698760-mRNA-1 |
| chr4_4 | CDS | 69135607 | 69135711 | 69135607 | ID=Msa0698760-mRNA-1:cds;Parent=Msa0698760-mRNA-1 |
| chr4_4 | CDS | 69137493 | 69137576 | 69137493 | ID=Msa0698760-mRNA-1:cds;Parent=Msa0698760-mRNA-1 |
| chr4_4 | three_prime_UTR | 69137577 | 69138101 | 69137577 | ID=Msa0698760-mRNA-1:three_prime_utr;Parent=Msa0698760-mRNA-1 |
| Gene Sequence |
| Protein sequence |
