AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0194570


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0194570 MtrunA17_Chr2g0285501 96.527 547 8 3 1 543 1 540 0.0 1059
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0194570 AT2G34640.1 66.533 499 137 6 47 543 54 524 0.0 623

Find 179 sgRNAs with CRISPR-Local

Find 455 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGTTTCTGCCATGGCTTTC+AGG 0.119391 2_1:+10820401 None:intergenic
ATTGGTCCATATTGTAATTT+TGG 0.131461 2_1:-10815050 Msa0194570:three_prime_UTR
TACAAACTTGATAAGAAATT+TGG 0.179469 2_1:-10820857 Msa0194570:CDS
AGTTATAGAACTTCGGTTTC+TGG 0.190994 2_1:-10821028 Msa0194570:CDS
TTCAGAAAAGGCAGCATATT+TGG 0.203050 2_1:+10818282 None:intergenic
GGACCCTCTTTCTTTGGTTT+TGG 0.220328 2_1:+10815432 None:intergenic
AATCAAAGATTAATCGTAAT+TGG 0.245476 2_1:-10816027 Msa0194570:CDS
ACTGGACAAGTGAAGCTTTA+TGG 0.248269 2_1:-10820382 Msa0194570:CDS
GTCATAGGACCCTCTTTCTT+TGG 0.255328 2_1:+10815426 None:intergenic
TGGTCAGCTTGAGCCGGCCT+CGG 0.298482 2_1:-10821191 Msa0194570:CDS
AGGTCTTCTCCTTTGCCATC+TGG 0.310172 2_1:+10820727 None:intergenic
TAGTTCACAGTTGGATAAAC+TGG 0.336700 2_1:+10818363 None:intergenic
TTTGCACCAAAATTACAATA+TGG 0.347566 2_1:+10815044 None:intergenic
TGAAGTTTGGAACCTGAAAA+TGG 0.349145 2_1:+10821884 None:intergenic
AAGGAACTGTTGAGCAAGTC+AGG 0.349440 2_1:-10821129 Msa0194570:CDS
AAGTACATGAAGTCCTAAAA+TGG 0.349716 2_1:+10814965 None:intergenic
CTGAAAGCCATGGCAGAAAC+TGG 0.351942 2_1:-10820400 Msa0194570:CDS
GATACCCCTCTGCATTCATT+TGG 0.367850 2_1:-10815123 Msa0194570:three_prime_UTR
TACTCAGTCTCTTCTTCCTC+AGG 0.369922 2_1:+10820878 None:intergenic
AGCCAGGCGCCATCTTTATA+AGG 0.370611 2_1:-10820323 Msa0194570:CDS
TGAGGCTGAGCAAGAGAAAC+TGG 0.379393 2_1:-10819954 Msa0194570:CDS
CTGGACCATTGTTCTTTCTC+CGG 0.380043 2_1:+10820746 None:intergenic
CACGATACTCTCGGTCAGTT+TGG 0.387384 2_1:+10819795 None:intergenic
ACCTTTCTTCCTTATAAAGA+TGG 0.390163 2_1:+10820314 None:intergenic
TCAGGCCAATACTCAACTTC+AGG 0.401061 2_1:+10821151 None:intergenic
TGTTGAGGGGAATGTTGAAT+TGG 0.402287 2_1:-10820987 Msa0194570:CDS
CACTTGTCCAGTTTCTGCCA+TGG 0.404280 2_1:+10820393 None:intergenic
ATGGCTAAAGCAGTCGATAT+TGG 0.407859 2_1:-10816285 Msa0194570:CDS
GAGTCCATGTAACTATAATA+AGG 0.410808 2_1:+10821220 None:intergenic
CGGTAGTCAATCACTTCATC+TGG 0.411124 2_1:+10818330 None:intergenic
AGAGGAAGAGGTAGAGGCAG+AGG 0.415304 2_1:-10816074 Msa0194570:CDS
TACCTTTGATTTGCGAAGCT+GGG 0.417069 2_1:+10815985 None:intergenic
AGAGGTAGTAGGAGAGGAAG+AGG 0.420146 2_1:-10816086 Msa0194570:CDS
GTGAGGAACTGTGGTGGAAT+TGG 0.423424 2_1:-10820775 Msa0194570:CDS
AGAGGGAGATGAAGAGGAAG+AGG 0.425786 2_1:-10816056 Msa0194570:CDS
TGCTAGGGCGCCTACTCCGA+TGG 0.427715 2_1:-10821104 Msa0194570:CDS
CATTCTGAATAGTACGCAAT+TGG 0.430427 2_1:+10819920 None:intergenic
GAACCTCACTGATTTCCTCT+TGG 0.431695 2_1:-10815376 Msa0194570:CDS
ACTTGCTCAACAGTTCCTTC+AGG 0.432258 2_1:+10821133 None:intergenic
CTCGTAAGTGTTCCTTCTAT+CGG 0.436600 2_1:+10820797 None:intergenic
ACAGCCTCATCCAGTGTCAT+AGG 0.439222 2_1:+10815411 None:intergenic
GGTCAGCTTGAGCCGGCCTC+GGG 0.440018 2_1:-10821190 Msa0194570:CDS
AAACTAACCGTTTCAGTGTC+AGG 0.440574 2_1:+10820707 None:intergenic
CCGAGAGTATCGTGTAATGA+TGG 0.442203 2_1:-10819786 Msa0194570:CDS
TTGTAAGTTGTAAACTCTCT+TGG 0.446489 2_1:-10814944 Msa0194570:three_prime_UTR
GGACAAGTTGGGTAGAAGAT+TGG 0.453163 2_1:+10821912 None:intergenic
TTGAGCAAGTCAGGGCTGCT+AGG 0.454849 2_1:-10821120 Msa0194570:CDS
ATACCTTTGATTTGCGAAGC+TGG 0.455050 2_1:+10815984 None:intergenic
TCGCATCCGAAGGGATCCTT+TGG 0.458415 2_1:-10819753 Msa0194570:CDS
AGAGGCAGAGGGAGATGAAG+AGG 0.461210 2_1:-10816062 Msa0194570:CDS
GAAAGAGGGTCCTATGACAC+TGG 0.467982 2_1:-10815421 Msa0194570:CDS
TTGTTGTCAAGAAGTACATA+AGG 0.472241 2_1:+10815150 None:intergenic
AGTAGGAGAGGAAGAGGTAG+AGG 0.475253 2_1:-10816080 Msa0194570:CDS
AAGTGAATGAACTCTTTACT+TGG 0.477050 2_1:-10814915 Msa0194570:three_prime_UTR
CTTCTTTCTGCAGTATGGGG+TGG 0.477880 2_1:-10818390 Msa0194570:intron
AAAATAACCTCCTTCAGAAA+AGG 0.478180 2_1:+10818270 None:intergenic
GTTGATGTTGAAGAGGTAGT+AGG 0.478672 2_1:-10816097 Msa0194570:CDS
CATGTAGACATCAACATACT+TGG 0.483842 2_1:-10821413 Msa0194570:intron
TCGTTAGGTTCTCCGTCATA+TGG 0.484863 2_1:-10821076 Msa0194570:CDS
GGCAATTTACAAAGTAGAGT+TGG 0.486421 2_1:-10821382 Msa0194570:CDS
TGTTGAAGAGGTAGTAGGAG+AGG 0.489920 2_1:-10816092 Msa0194570:CDS
AGTTACATGGACTCCACCTC+TGG 0.490851 2_1:-10821211 Msa0194570:CDS
TCCTCCGAGGGTAATGTTGA+GGG 0.493412 2_1:-10821001 Msa0194570:CDS
AAAATGGTTGAAGGACAAGT+TGG 0.496890 2_1:+10821900 None:intergenic
GAACTTAGAAAATATTAACT+AGG 0.498792 2_1:-10815101 Msa0194570:three_prime_UTR
CAATTGCGTACTATTCAGAA+TGG 0.504878 2_1:-10819919 Msa0194570:CDS
TTCCTCCGAGGGTAATGTTG+AGG 0.505354 2_1:-10821002 Msa0194570:CDS
AAACTGCTCTTTACCGAGCC+AGG 0.506007 2_1:-10820339 Msa0194570:CDS
ATCCTTTGGCAATGAGAATG+AGG 0.506775 2_1:-10819739 Msa0194570:CDS
TTCCTTATAAAGATGGCGCC+TGG 0.506882 2_1:+10820321 None:intergenic
CAGAAGCACTTCGAAGAGAC+TGG 0.507894 2_1:-10819857 Msa0194570:CDS
GCAGTAACTGAAACGTCGTC+CGG 0.513490 2_1:+10821965 None:intergenic
CACCTCTGGTCAGCTTGAGC+CGG 0.515556 2_1:-10821197 Msa0194570:CDS
CTTTATTGACCAGGATGAAG+AGG 0.515558 2_1:-10816128 Msa0194570:intron
CGAGAGTATCGTGTAATGAT+GGG 0.518857 2_1:-10819785 Msa0194570:CDS
TAACTCTTCCTCCTACTACC+AGG 0.519268 2_1:+10821046 None:intergenic
GAGGAAGAGGTAGAGGCAGA+GGG 0.520634 2_1:-10816073 Msa0194570:CDS
GCCATCTTTATAAGGAAGAA+AGG 0.521390 2_1:-10820315 Msa0194570:intron
TGAGGTTCAACCAAAACCTC+AGG 0.523352 2_1:+10820950 None:intergenic
AAAGGCAGCATATTTGGTGT+TGG 0.523847 2_1:+10818288 None:intergenic
AAGTGGTATACTTCAGAAGT+AGG 0.525135 2_1:-10815304 Msa0194570:three_prime_UTR
TATAAAGATGGCGCCTGGCT+CGG 0.525875 2_1:+10820326 None:intergenic
TGAGCAAGTCAGGGCTGCTA+GGG 0.527597 2_1:-10821119 Msa0194570:CDS
ACTCCGATGGGAGAATCGTT+AGG 0.529478 2_1:-10821091 Msa0194570:CDS
GTTTCTGGTTCTTCCTCCGA+GGG 0.530417 2_1:-10821013 Msa0194570:CDS
ACCAAAACCTCAGGAAAACC+AGG 0.534846 2_1:+10820959 None:intergenic
GGGTCCTATGACACTGGATG+AGG 0.535860 2_1:-10815415 Msa0194570:CDS
TCTTGAATATAGTTCACAGT+TGG 0.536657 2_1:+10818354 None:intergenic
TTCGGATCAATAAATGGATG+AGG 0.537349 2_1:+10820830 None:intergenic
TGGAACCTGAAAATGGTTGA+AGG 0.538548 2_1:+10821891 None:intergenic
GAGGAAGAGTTATAGAACTT+CGG 0.541827 2_1:-10821035 Msa0194570:CDS
GCTAGGGCGCCTACTCCGAT+GGG 0.542290 2_1:-10821103 Msa0194570:CDS
GCAGCCAAAACCAAAGAAAG+AGG 0.542396 2_1:-10815436 Msa0194570:intron
GTATTCCTGAAGTTGAGTAT+TGG 0.542969 2_1:-10821156 Msa0194570:CDS
GAGTTGAGTGAGCTTCTCTC+CGG 0.543862 2_1:-10821984 Msa0194570:five_prime_UTR
GAAGTTGAGTATTGGCCTGA+AGG 0.544418 2_1:-10821148 Msa0194570:CDS
CAAGAGAAACTGGAAAGGAT+TGG 0.544926 2_1:-10819944 Msa0194570:CDS
ACGTTTCAGTTACTGCAAAA+CGG 0.544997 2_1:-10821958 Msa0194570:five_prime_UTR
AAACATTTCAATTAGTTGAG+TGG 0.546235 2_1:+10819823 None:intergenic
CATCTTATGCAACTATATGA+AGG 0.548090 2_1:+10821334 None:intergenic
TCCACCTTATTATAGTTACA+TGG 0.548590 2_1:-10821224 Msa0194570:CDS
AAATGGTTGAAGGACAAGTT+GGG 0.548730 2_1:+10821901 None:intergenic
TCAACATACTTGGTGGGTGT+TGG 0.550157 2_1:-10821403 Msa0194570:CDS
TGTTGTCAAGAAGTACATAA+GGG 0.551290 2_1:+10815151 None:intergenic
GATACTCTCGGTCAGTTTGG+TGG 0.552011 2_1:+10819798 None:intergenic
ACCTTTGATTTGCGAAGCTG+GGG 0.552260 2_1:+10815986 None:intergenic
ATGGTAGTAACCCTGGTAGT+AGG 0.556214 2_1:-10821057 Msa0194570:CDS
GACAGACATCGATGAAGCTA+TGG 0.556862 2_1:-10816304 Msa0194570:CDS
GAGAAGACCTGACACTGAAA+CGG 0.558802 2_1:-10820714 Msa0194570:intron
ATACTCTCGGTCAGTTTGGT+GGG 0.561825 2_1:+10819799 None:intergenic
AATTGCGTACTATTCAGAAT+GGG 0.563735 2_1:-10819918 Msa0194570:CDS
GGCTTGAATTGAAGACATAA+CGG 0.566463 2_1:+10821933 None:intergenic
GGACTGATGTTCGCATCCGA+AGG 0.566579 2_1:-10819763 Msa0194570:CDS
ATTCAGAATGGGTAAAGGCA+TGG 0.569529 2_1:-10819907 Msa0194570:CDS
CATGGAACATGCGCTTCACG+AGG 0.572556 2_1:+10815329 None:intergenic
TAGTGATGTTGATGTTGAAG+AGG 0.575406 2_1:-10816104 Msa0194570:CDS
TCCCCAGCTTCGCAAATCAA+AGG 0.575430 2_1:-10815987 Msa0194570:intron
AACTCCTCAGAATCTTCTTG+AGG 0.576814 2_1:+10820932 None:intergenic
ACGTTATGTTCCATGAAAAG+TGG 0.577122 2_1:-10815276 Msa0194570:three_prime_UTR
CCGTCATATGGTAGTAACCC+TGG 0.586388 2_1:-10821064 Msa0194570:CDS
GCAAAAGACTGAACAAGTTG+AGG 0.586413 2_1:-10817279 Msa0194570:intron
AAATGGAAAATGATAAGGGA+GGG 0.586691 2_1:-10822033 Msa0194570:five_prime_UTR
AGCGCATGTTCCATGAAAAG+TGG 0.586757 2_1:-10815321 Msa0194570:three_prime_UTR
TCCCTCATTCTCATTGCCAA+AGG 0.587340 2_1:+10819737 None:intergenic
TTCAGTGGCAATAACTCAAG+TGG 0.587930 2_1:+10815179 None:intergenic
AACTCTTCCTCCTACTACCA+GGG 0.587983 2_1:+10821047 None:intergenic
TCATTGCCAAAGGATCCCTT+CGG 0.589078 2_1:+10819747 None:intergenic
AAGTTCCAAATGAATGCAGA+GGG 0.591425 2_1:+10815118 None:intergenic
GGTTTCTGGTTCTTCCTCCG+AGG 0.591665 2_1:-10821014 Msa0194570:CDS
CGGCTCAAGCTGACCAGAGG+TGG 0.592856 2_1:+10821198 None:intergenic
AGAAAGAACAATGGTCCAGA+TGG 0.596412 2_1:-10820742 Msa0194570:CDS
ATAAGAATACAAACTACTTG+AGG 0.599617 2_1:+10814994 None:intergenic
GTAGACATCAACATACTTGG+TGG 0.599655 2_1:-10821410 Msa0194570:intron
GTACTATTCAGAATGGGTAA+AGG 0.599998 2_1:-10819912 Msa0194570:CDS
TACATAAGGGACTGTTTCAG+TGG 0.602191 2_1:+10815164 None:intergenic
GGCCGGCTCAAGCTGACCAG+AGG 0.603831 2_1:+10821195 None:intergenic
GACTGATGTTCGCATCCGAA+GGG 0.605543 2_1:-10819762 Msa0194570:CDS
AGAGCAGTTTCTGTTAACGT+TGG 0.606934 2_1:+10820352 None:intergenic
CTTGCTCTAGCACCCGAGGC+CGG 0.609918 2_1:+10821178 None:intergenic
GAACCTAACGATTCTCCCAT+CGG 0.610317 2_1:+10821088 None:intergenic
GTGGTGGAATTGGAGAAAGC+CGG 0.612355 2_1:-10820765 Msa0194570:CDS
ATGAAGTGATTGACTACCGA+GGG 0.612510 2_1:-10818326 Msa0194570:CDS
AATGTTGAATTGGATGACCC+TGG 0.613925 2_1:-10820977 Msa0194570:CDS
AGAAGGAACACTTACGAGTG+AGG 0.614697 2_1:-10820792 Msa0194570:CDS
CCATCATTACACGATACTCT+CGG 0.616131 2_1:+10819786 None:intergenic
ATTCCCCTCAACATTACCCT+CGG 0.618187 2_1:+10820997 None:intergenic
GTAGTAACCCTGGTAGTAGG+AGG 0.618481 2_1:-10821054 Msa0194570:CDS
TGTTTATCAGTCTGAGCCTG+AGG 0.618831 2_1:-10820894 Msa0194570:CDS
AACGATTCTCCCATCGGAGT+AGG 0.619729 2_1:+10821094 None:intergenic
TCCTTTGGCAATGAGAATGA+GGG 0.620133 2_1:-10819738 Msa0194570:CDS
TAGACATCAACATACTTGGT+GGG 0.620442 2_1:-10821409 Msa0194570:CDS
ATTCTTCTTCAAAATCCAAG+AGG 0.624158 2_1:+10815361 None:intergenic
CTGAGCAAGAGAAACTGGAA+AGG 0.626625 2_1:-10819949 Msa0194570:CDS
CAGCCAAAACCAAAGAAAGA+GGG 0.628174 2_1:-10815435 Msa0194570:CDS
GTTCATGAAAATCTGCCCCT+CGG 0.630667 2_1:+10818310 None:intergenic
AGGAACTGTTGAGCAAGTCA+GGG 0.634307 2_1:-10821128 Msa0194570:CDS
AACAATGGTCCAGATGGCAA+AGG 0.635970 2_1:-10820736 Msa0194570:CDS
TAAGTTCCAAATGAATGCAG+AGG 0.637959 2_1:+10815117 None:intergenic
GGAACATGCGCTTCACGAGG+AGG 0.640899 2_1:+10815332 None:intergenic
TGAACCTCAAGAAGATTCTG+AGG 0.640936 2_1:-10820936 Msa0194570:CDS
CCTCCGAGGGTAATGTTGAG+GGG 0.643204 2_1:-10821000 Msa0194570:CDS
CACTTACGAGTGAGGAACTG+TGG 0.647512 2_1:-10820784 Msa0194570:CDS
AAAATGGAAAATGATAAGGG+AGG 0.650522 2_1:-10822034 Msa0194570:five_prime_UTR
AGACTGATAAACAACATAGT+CGG 0.650698 2_1:+10820904 None:intergenic
TCCATGTAACTATAATAAGG+TGG 0.654364 2_1:+10821223 None:intergenic
TCAGTGGCAATAACTCAAGT+GGG 0.662084 2_1:+10815180 None:intergenic
AATACTTGCTCTAGCACCCG+AGG 0.666722 2_1:+10821174 None:intergenic
ATGACACTGGATGAGGCTGT+AGG 0.670072 2_1:-10815408 Msa0194570:CDS
GAGAGTATCGTGTAATGATG+GGG 0.670714 2_1:-10819784 Msa0194570:CDS
TTTGGCAATGAGAATGAGGG+AGG 0.675932 2_1:-10819735 Msa0194570:CDS
CCAGGGTTACTACCATATGA+CGG 0.681449 2_1:+10821064 None:intergenic
CCCCTCAACATTACCCTCGG+AGG 0.683343 2_1:+10821000 None:intergenic
TTACGAGTGAGGAACTGTGG+TGG 0.692991 2_1:-10820781 Msa0194570:CDS
GATGAAGTGATTGACTACCG+AGG 0.693562 2_1:-10818327 Msa0194570:CDS
GAAAGCCGGAGAAAGAACAA+TGG 0.713371 2_1:-10820751 Msa0194570:CDS
CCAAAACCTCAGGAAAACCA+GGG 0.716482 2_1:+10820960 None:intergenic
AATCCAAGAGGAAATCAGTG+AGG 0.723459 2_1:+10815373 None:intergenic
TGAAGTGATTGACTACCGAG+GGG 0.765362 2_1:-10818325 Msa0194570:CDS
AGTTCCAAATGAATGCAGAG+GGG 0.771955 2_1:+10815119 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTATAGTTTTTATGTAATA+TGG - chr2_1:10815489-10815508 Msa0194570:intron 10.0%
!! TAACATTAAATAAAATATCA+AGG + chr2_1:10818397-10818416 None:intergenic 10.0%
!! ATCTTTACATAAAATAAATA+TGG - chr2_1:10818793-10818812 Msa0194570:intron 10.0%
!!! AAGTCAAATTTTTTAAAATA+TGG + chr2_1:10818998-10819017 None:intergenic 10.0%
!! ATCATAATAATTAAATTTAG+AGG + chr2_1:10819233-10819252 None:intergenic 10.0%
!!! AATTTCTCTATAATATTTTC+AGG - chr2_1:10816527-10816546 Msa0194570:intron 15.0%
!! GTGATTAAAATCATAAATTA+AGG - chr2_1:10816868-10816887 Msa0194570:intron 15.0%
!!! CATTCCTTTTTTTTTATATA+CGG + chr2_1:10818028-10818047 None:intergenic 15.0%
!!! AATTTTATTGAATTTTGTCT+TGG - chr2_1:10818122-10818141 Msa0194570:intron 15.0%
!!! ATTTTATTGAATTTTGTCTT+GGG - chr2_1:10818123-10818142 Msa0194570:intron 15.0%
!! CACATATTTCATAAAAATAT+TGG + chr2_1:10819554-10819573 None:intergenic 15.0%
!!! CAATATTTTTATGAAATATG+TGG - chr2_1:10819552-10819571 Msa0194570:intron 15.0%
!! TTAACTTATAATTGAAAATC+TGG - chr2_1:10819979-10819998 Msa0194570:intron 15.0%
!! TTTCAATATCCTAAAAATAT+TGG - chr2_1:10821887-10821906 Msa0194570:intron 15.0%
!! AAAAAGGAAATAGAGAAAAA+TGG - chr2_1:10814905-10814924 Msa0194570:three_prime_UTR 20.0%
!! AGAAAAATGGAAAATGATAA+GGG - chr2_1:10814918-10814937 Msa0194570:three_prime_UTR 20.0%
!! AAAGGTAAATAATTGAAGTT+TGG + chr2_1:10815087-10815106 None:intergenic 20.0%
!!! GTTTAAGAAATAGTATTGAA+AGG + chr2_1:10815105-10815124 None:intergenic 20.0%
!! GAATTAATGAAATGAATAGT+GGG + chr2_1:10815127-10815146 None:intergenic 20.0%
!! TGAATTAATGAAATGAATAG+TGG + chr2_1:10815128-10815147 None:intergenic 20.0%
!!! CTATATATCTTGTTTCATTA+TGG - chr2_1:10815228-10815247 Msa0194570:three_prime_UTR 20.0%
!! TACAAACTTGATAAGAAATT+TGG - chr2_1:10816098-10816117 Msa0194570:CDS 20.0%
!!! TTAATTTTCGGATCAATAAA+TGG + chr2_1:10816134-10816153 None:intergenic 20.0%
!!! GTAAAGGTGAATAAATTTTT+AGG + chr2_1:10816381-10816400 None:intergenic 20.0%
!! AAAATTTATTCACCTTTACA+AGG - chr2_1:10816382-10816401 Msa0194570:intron 20.0%
!! AAGGTTATGCATTATTTAAA+TGG - chr2_1:10816401-10816420 Msa0194570:intron 20.0%
!! ATCAAGTAATACTAGAATTA+AGG + chr2_1:10816848-10816867 None:intergenic 20.0%
!! GTTACTTGAAAAAATTTACT+TGG - chr2_1:10816946-10816965 Msa0194570:intron 20.0%
!! TTAAAAACTAACTATAAAGG+GGG + chr2_1:10817862-10817881 None:intergenic 20.0%
!! CTTAAAAACTAACTATAAAG+GGG + chr2_1:10817863-10817882 None:intergenic 20.0%
!! CCTTAAAAACTAACTATAAA+GGG + chr2_1:10817864-10817883 None:intergenic 20.0%
!!! CCTTTATAGTTAGTTTTTAA+GGG - chr2_1:10817862-10817881 Msa0194570:intron 20.0%
!! TCCAATATTTAATGTAGTTA+TGG - chr2_1:10817928-10817947 Msa0194570:intron 20.0%
!! ACCATAACTACATTAAATAT+TGG + chr2_1:10817932-10817951 None:intergenic 20.0%
!! TTGTCCGTATATAAAAAAAA+AGG - chr2_1:10818021-10818040 Msa0194570:intron 20.0%
!!! TGTTTTTTCTCTGAAAAAAA+AGG + chr2_1:10818102-10818121 None:intergenic 20.0%
!!! ACTAATATATGAAGAGTTTT+GGG - chr2_1:10818255-10818274 Msa0194570:intron 20.0%
!!! AAATTTAACAATTGCTATTC+TGG + chr2_1:10818543-10818562 None:intergenic 20.0%
!! TATATATATAAGTGTCTTGT+AGG + chr2_1:10819109-10819128 None:intergenic 20.0%
!!! TAATAATGATAGTGAAGATA+TGG - chr2_1:10819730-10819749 Msa0194570:CDS 20.0%
!! TGAAATACAGACATTATATA+TGG - chr2_1:10819863-10819882 Msa0194570:CDS 20.0%
!!! TGATTTCATTGATTATGTTA+AGG - chr2_1:10820171-10820190 Msa0194570:intron 20.0%
!!! GATTTCATTGATTATGTTAA+GGG - chr2_1:10820172-10820191 Msa0194570:intron 20.0%
!! GTGAAGTTATTATAAAAAGT+TGG + chr2_1:10820349-10820368 None:intergenic 20.0%
!! GTAATAATTCCACAAAAAAT+TGG + chr2_1:10820537-10820556 None:intergenic 20.0%
!!! TTTTTTGTGGAATTATTACT+TGG - chr2_1:10820538-10820557 Msa0194570:intron 20.0%
!!! ACCTTTTATTATTTGCAATA+TGG - chr2_1:10820623-10820642 Msa0194570:intron 20.0%
!! AAGTTAGAAAAGTAAAAAGA+TGG + chr2_1:10820721-10820740 None:intergenic 20.0%
!! AATAAAGTAAGAAATGAAAC+AGG + chr2_1:10820814-10820833 None:intergenic 20.0%
!! AATCAAAGATTAATCGTAAT+TGG - chr2_1:10820928-10820947 Msa0194570:CDS 20.0%
!! TAGCTCATATAAAAATTGTT+TGG - chr2_1:10821168-10821187 Msa0194570:CDS 20.0%
!! CAGCTTATATAAAAATTGTT+TGG - chr2_1:10821261-10821280 Msa0194570:CDS 20.0%
!!! AGAATATTTTCTTACTTCAT+CGG - chr2_1:10821470-10821489 Msa0194570:intron 20.0%
!! GAACTTAGAAAATATTAACT+AGG - chr2_1:10821854-10821873 Msa0194570:intron 20.0%
!!! TTCTTATTTATTGCCATTTT+AGG - chr2_1:10821977-10821996 Msa0194570:five_prime_UTR 20.0%
! GAGAAAAATGGAAAATGATA+AGG - chr2_1:10814917-10814936 Msa0194570:three_prime_UTR 25.0%
!!! TCTATCGGCTTTTTAATTTT+CGG + chr2_1:10816146-10816165 None:intergenic 25.0%
! AAAATTAAAAAGCCGATAGA+AGG - chr2_1:10816146-10816165 Msa0194570:intron 25.0%
!! TAGTTTGCATTAAATTGTCT+TGG - chr2_1:10816265-10816284 Msa0194570:intron 25.0%
! AATAATGCATAACCTTGTAA+AGG + chr2_1:10816397-10816416 None:intergenic 25.0%
!! ATGGTAATGTTACTAAAGAA+AGG + chr2_1:10816448-10816467 None:intergenic 25.0%
! TCTGATTAGAATTAAGAAAG+TGG - chr2_1:10816693-10816712 Msa0194570:intron 25.0%
! AAACAAGAAACTCAATAGAA+AGG - chr2_1:10816769-10816788 Msa0194570:intron 25.0%
! AGAATGAGTAAATTCGTTAA+AGG - chr2_1:10816811-10816830 Msa0194570:intron 25.0%
! AAACATTTCAATTAGTTGAG+TGG + chr2_1:10817135-10817154 None:intergenic 25.0%
!!! CCCTTTATAGTTAGTTTTTA+AGG - chr2_1:10817861-10817880 Msa0194570:intron 25.0%
! CCCTTAAAAACTAACTATAA+AGG + chr2_1:10817865-10817884 None:intergenic 25.0%
!!! TTATAGTTAGTTTTTAAGGG+TGG - chr2_1:10817865-10817884 Msa0194570:intron 25.0%
!!! TATAGTTAGTTTTTAAGGGT+GGG - chr2_1:10817866-10817885 Msa0194570:intron 25.0%
!! CAGTAATGTTATTTACTAGA+AGG + chr2_1:10817961-10817980 None:intergenic 25.0%
!! GACTAATATATGAAGAGTTT+TGG - chr2_1:10818254-10818273 Msa0194570:intron 25.0%
!! CTAATATATGAAGAGTTTTG+GGG - chr2_1:10818256-10818275 Msa0194570:intron 25.0%
!!! TCATATATTTAGTTTTGTCC+TGG - chr2_1:10818350-10818369 Msa0194570:CDS 25.0%
! ACATCTTATGTTCAAATACT+TGG - chr2_1:10818490-10818509 Msa0194570:intron 25.0%
!! AGATTATTTAGAATCTAGAG+TGG + chr2_1:10818516-10818535 None:intergenic 25.0%
! TGAAAATTTCGATTGCTAAA+GGG - chr2_1:10818750-10818769 Msa0194570:intron 25.0%
! TAAATATGGAACATATCTTC+AGG - chr2_1:10818807-10818826 Msa0194570:intron 25.0%
! TCTTTACTTATAAAGCAATG+AGG + chr2_1:10819344-10819363 None:intergenic 25.0%
! TTATAAGTAAAGACTAGAGA+TGG - chr2_1:10819351-10819370 Msa0194570:intron 25.0%
! TACAGACATTATATATGGTT+TGG - chr2_1:10819868-10819887 Msa0194570:CDS 25.0%
! GACTTTCGTTTCATTATATA+TGG - chr2_1:10819901-10819920 Msa0194570:CDS 25.0%
!! TTTCGTTTCATTTTATGACT+CGG - chr2_1:10819942-10819961 Msa0194570:CDS 25.0%
!! ACTTTTATTAGAGTATAGCT+AGG + chr2_1:10820371-10820390 None:intergenic 25.0%
! AATATTAAGGATTGAATGAC+AGG + chr2_1:10820436-10820455 None:intergenic 25.0%
! ACTGTGGTAACAAAATATTA+AGG + chr2_1:10820449-10820468 None:intergenic 25.0%
! AGTTCAGGTAAAATAATCAA+CGG + chr2_1:10820577-10820596 None:intergenic 25.0%
! GCCATATTGCAAATAATAAA+AGG + chr2_1:10820627-10820646 None:intergenic 25.0%
! TTTATTATTTGCAATATGGC+AGG - chr2_1:10820627-10820646 Msa0194570:intron 25.0%
!! TTACTCAAAATCAACCATTT+TGG + chr2_1:10820786-10820805 None:intergenic 25.0%
! AACAACACATAACATTAACA+GGG + chr2_1:10821028-10821047 None:intergenic 25.0%
! AAACAACACATAACATTAAC+AGG + chr2_1:10821029-10821048 None:intergenic 25.0%
!!! AGCTATAGTTATGTTTTGAT+AGG - chr2_1:10821222-10821241 Msa0194570:CDS 25.0%
! ACTAAGTTATTTATCCAAAC+TGG - chr2_1:10821347-10821366 Msa0194570:CDS 25.0%
! CTAAGTTATTTATCCAAACT+GGG - chr2_1:10821348-10821367 Msa0194570:CDS 25.0%
!!! TCTTTTTTATATCTCCTACT+GGG - chr2_1:10821407-10821426 Msa0194570:CDS 25.0%
!!! ATAATGAATACCACTTTTCA+TGG + chr2_1:10821692-10821711 None:intergenic 25.0%
!! CAATATGGACCAATATTTTT+AGG + chr2_1:10821899-10821918 None:intergenic 25.0%
!! ATTGGTCCATATTGTAATTT+TGG - chr2_1:10821905-10821924 Msa0194570:CDS 25.0%
! TTTGCACCAAAATTACAATA+TGG + chr2_1:10821914-10821933 None:intergenic 25.0%
! ATAAGAATACAAACTACTTG+AGG + chr2_1:10821964-10821983 None:intergenic 25.0%
AAAATGGAAAATGATAAGGG+AGG - chr2_1:10814921-10814940 Msa0194570:three_prime_UTR 30.0%
AAATGGAAAATGATAAGGGA+GGG - chr2_1:10814922-10814941 Msa0194570:three_prime_UTR 30.0%
! TAGCTGATAAGTTAGCTTAT+AGG - chr2_1:10815274-10815293 Msa0194570:three_prime_UTR 30.0%
TAAGCTATAAGCTCAAAATC+TGG + chr2_1:10815315-10815334 None:intergenic 30.0%
CATCTTATGCAACTATATGA+AGG + chr2_1:10815624-10815643 None:intergenic 30.0%
TCCACCTTATTATAGTTACA+TGG - chr2_1:10815731-10815750 Msa0194570:intron 30.0%
TCCATGTAACTATAATAAGG+TGG + chr2_1:10815735-10815754 None:intergenic 30.0%
GAGTCCATGTAACTATAATA+AGG + chr2_1:10815738-10815757 None:intergenic 30.0%
AGACTGATAAACAACATAGT+CGG + chr2_1:10816054-10816073 None:intergenic 30.0%
TCAATCATAAAGCACAAAAC+CGG + chr2_1:10816348-10816367 None:intergenic 30.0%
TAAAGAAAGGACTTATGAAC+TGG + chr2_1:10816435-10816454 None:intergenic 30.0%
ACTATCAACAATGTGAGAAA+AGG + chr2_1:10816485-10816504 None:intergenic 30.0%
TATAGAGAAATTCAGACACA+AGG + chr2_1:10816519-10816538 None:intergenic 30.0%
ACCTTTCTTCCTTATAAAGA+TGG + chr2_1:10816644-10816663 None:intergenic 30.0%
TATGTTGTGAGCATAAAAGT+CGG + chr2_1:10816671-10816690 None:intergenic 30.0%
AAGAAACTCAATAGAAAGGT+TGG - chr2_1:10816773-10816792 Msa0194570:intron 30.0%
! TGAAAATTTCCGATTTTTGC+AGG - chr2_1:10816976-10816995 Msa0194570:intron 30.0%
AATTGCGTACTATTCAGAAT+GGG - chr2_1:10817037-10817056 Msa0194570:intron 30.0%
! ATCCTTTCATCTTCCTTTTT+AGG - chr2_1:10817330-10817349 Msa0194570:intron 30.0%
ATCCTAAAAAGGAAGATGAA+AGG + chr2_1:10817335-10817354 None:intergenic 30.0%
ATGGTCATAGAATCCTAAAA+AGG + chr2_1:10817346-10817365 None:intergenic 30.0%
CAATGCTAAATACAGTTGAA+TGG + chr2_1:10817365-10817384 None:intergenic 30.0%
AAGTTTAAGCAGTTAGAGAA+GGG - chr2_1:10817417-10817436 Msa0194570:intron 30.0%
TAGTAGACTTTCATGTGTAT+AGG + chr2_1:10817475-10817494 None:intergenic 30.0%
TATACACATGAAAGTCTACT+AGG - chr2_1:10817474-10817493 Msa0194570:intron 30.0%
TGACTATCAACTAAGCAATA+GGG + chr2_1:10817514-10817533 None:intergenic 30.0%
TTGACTATCAACTAAGCAAT+AGG + chr2_1:10817515-10817534 None:intergenic 30.0%
!! TAGTTGATAGTCAACTTGAT+AGG - chr2_1:10817521-10817540 Msa0194570:intron 30.0%
!! AGTTGATAGTCAACTTGATA+GGG - chr2_1:10817522-10817541 Msa0194570:intron 30.0%
TTAGCAATTGCAATTAGAAC+TGG - chr2_1:10817644-10817663 Msa0194570:intron 30.0%
TTAGGGACTTGGATATTATA+GGG - chr2_1:10817778-10817797 Msa0194570:intron 30.0%
AGTATTACTGTGCTCTTATT+AGG - chr2_1:10817991-10818010 Msa0194570:intron 30.0%
! TCTCTGAAAAAAAAGGCATA+TGG + chr2_1:10818095-10818114 None:intergenic 30.0%
! ATATTTTCCAGGACAAAACT+CGG + chr2_1:10818174-10818193 None:intergenic 30.0%
!! TGTTTCTGCATATATTTTCC+AGG + chr2_1:10818185-10818204 None:intergenic 30.0%
GTTGTCCTGTTAATATTAAC+AGG - chr2_1:10818223-10818242 Msa0194570:intron 30.0%
GTTGTCCTGTTAATATTAAC+AGG + chr2_1:10818223-10818242 None:intergenic 30.0%
TGTTTCTTCATATATTCTCC+AGG + chr2_1:10818307-10818326 None:intergenic 30.0%
GGTTTAAGAAAGATACTTAG+AGG + chr2_1:10818430-10818449 None:intergenic 30.0%
TCTTGAATATAGTTCACAGT+TGG + chr2_1:10818604-10818623 None:intergenic 30.0%
AAAATAACCTCCTTCAGAAA+AGG + chr2_1:10818688-10818707 None:intergenic 30.0%
CTGAAAATTTCGATTGCTAA+AGG - chr2_1:10818749-10818768 Msa0194570:intron 30.0%
ATAGATTTGAGCTTATCTAC+TGG - chr2_1:10818915-10818934 Msa0194570:intron 30.0%
!! CTAACTTATATTTTGGACAG+AGG + chr2_1:10819181-10819200 None:intergenic 30.0%
TCCAAAATATAAGTTAGCTG+TGG - chr2_1:10819184-10819203 Msa0194570:intron 30.0%
! ACCACAGCTAACTTATATTT+TGG + chr2_1:10819188-10819207 None:intergenic 30.0%
TTGTTACACTTACATCGATA+AGG - chr2_1:10819427-10819446 Msa0194570:intron 30.0%
AAAACATATCATGTGCTCTT+GGG + chr2_1:10819458-10819477 None:intergenic 30.0%
ATTTCAACAAACAACAGAGA+AGG + chr2_1:10819504-10819523 None:intergenic 30.0%
TCCATTATATATGATCAGCA+TGG - chr2_1:10819611-10819630 Msa0194570:intron 30.0%
TCCATGCTGATCATATATAA+TGG + chr2_1:10819615-10819634 None:intergenic 30.0%
AGCATGGAAAAATCATTTCA+AGG - chr2_1:10819627-10819646 Msa0194570:intron 30.0%
GCATGGAAAAATCATTTCAA+GGG - chr2_1:10819628-10819647 Msa0194570:intron 30.0%
! ATCTATTGTTGAGCTTTGTA+TGG - chr2_1:10819816-10819835 Msa0194570:CDS 30.0%
!!! AATGGTGAAGAAGCATTTTA+AGG - chr2_1:10820068-10820087 Msa0194570:intron 30.0%
!! ACTTCTAAGATCTAACAGAT+TGG - chr2_1:10820254-10820273 Msa0194570:intron 30.0%
!!! CGTTAACAACCAATTTTTTG+TGG - chr2_1:10820525-10820544 Msa0194570:intron 30.0%
AGAACACTATTATGAAGTTC+AGG + chr2_1:10820592-10820611 None:intergenic 30.0%
!! CAAAATCAACCATTTTGGAA+TGG + chr2_1:10820781-10820800 None:intergenic 30.0%
CATTTCTTACTTTATTGACC+AGG - chr2_1:10820818-10820837 Msa0194570:CDS 30.0%
TGAGCTCATATAAGTTATGA+AGG - chr2_1:10821062-10821081 Msa0194570:CDS 30.0%
!!! AGTTTTTGTTTTGTCCATCT+AGG - chr2_1:10821124-10821143 Msa0194570:CDS 30.0%
! TTTTCATAACCTATCCTAGA+TGG + chr2_1:10821141-10821160 None:intergenic 30.0%
!!! GTCTTTTTTATATCTCCTAC+TGG - chr2_1:10821406-10821425 Msa0194570:CDS 30.0%
ATTCTTCTTCAAAATCCAAG+AGG + chr2_1:10821597-10821616 None:intergenic 30.0%
! TGTTGTCAAGAAGTACATAA+GGG + chr2_1:10821807-10821826 None:intergenic 30.0%
! TTGTTGTCAAGAAGTACATA+AGG + chr2_1:10821808-10821827 None:intergenic 30.0%
AAGTACATGAAGTCCTAAAA+TGG + chr2_1:10821993-10822012 None:intergenic 30.0%
TTGTAAGTTGTAAACTCTCT+TGG - chr2_1:10822011-10822030 Msa0194570:five_prime_UTR 30.0%
AAGTGAATGAACTCTTTACT+TGG - chr2_1:10822040-10822059 Msa0194570:five_prime_UTR 30.0%
ACGTTTCAGTTACTGCAAAA+CGG - chr2_1:10814997-10815016 Msa0194570:three_prime_UTR 35.0%
GGCTTGAATTGAAGACATAA+CGG + chr2_1:10815025-10815044 None:intergenic 35.0%
AAATGGTTGAAGGACAAGTT+GGG + chr2_1:10815057-10815076 None:intergenic 35.0%
AAAATGGTTGAAGGACAAGT+TGG + chr2_1:10815058-10815077 None:intergenic 35.0%
! TGAAGTTTGGAACCTGAAAA+TGG + chr2_1:10815074-10815093 None:intergenic 35.0%
ATAAGCTCAAAATCTGGCAT+TGG + chr2_1:10815309-10815328 None:intergenic 35.0%
CAAGTATGTTGATGTCTACA+TGG + chr2_1:10815544-10815563 None:intergenic 35.0%
CATGTAGACATCAACATACT+TGG - chr2_1:10815542-10815561 Msa0194570:intron 35.0%
TAGACATCAACATACTTGGT+GGG - chr2_1:10815546-10815565 Msa0194570:intron 35.0%
GGCAATTTACAAAGTAGAGT+TGG - chr2_1:10815573-10815592 Msa0194570:intron 35.0%
GTATTCCTGAAGTTGAGTAT+TGG - chr2_1:10815799-10815818 Msa0194570:intron 35.0%
GAGGAAGAGTTATAGAACTT+CGG - chr2_1:10815920-10815939 Msa0194570:intron 35.0%
AGTTATAGAACTTCGGTTTC+TGG - chr2_1:10815927-10815946 Msa0194570:intron 35.0%
TTCGGATCAATAAATGGATG+AGG + chr2_1:10816128-10816147 None:intergenic 35.0%
GCATTATTTAAATGGTCGTG+TGG - chr2_1:10816409-10816428 Msa0194570:intron 35.0%
! AAAGGCTTTGATTGTCGATA+TGG + chr2_1:10816467-10816486 None:intergenic 35.0%
GCCATCTTTATAAGGAAGAA+AGG - chr2_1:10816640-10816659 Msa0194570:intron 35.0%
AAGTTTACCACAATATGCCA+TGG - chr2_1:10816905-10816924 Msa0194570:intron 35.0%
AGTTTACCACAATATGCCAT+GGG - chr2_1:10816906-10816925 Msa0194570:intron 35.0%
CATTCTGAATAGTACGCAAT+TGG + chr2_1:10817038-10817057 None:intergenic 35.0%
CAATTGCGTACTATTCAGAA+TGG - chr2_1:10817036-10817055 Msa0194570:intron 35.0%
GTACTATTCAGAATGGGTAA+AGG - chr2_1:10817043-10817062 Msa0194570:intron 35.0%
TGCTTAAACTTCTAGGTGTA+GGG + chr2_1:10817408-10817427 None:intergenic 35.0%
CTCTAACTGCTTAAACTTCT+AGG + chr2_1:10817415-10817434 None:intergenic 35.0%
GAAGTTTAAGCAGTTAGAGA+AGG - chr2_1:10817416-10817435 Msa0194570:intron 35.0%
AACCACTTAAATACTCCACT+GGG + chr2_1:10817566-10817585 None:intergenic 35.0%
AAACCACTTAAATACTCCAC+TGG + chr2_1:10817567-10817586 None:intergenic 35.0%
TTAAAAGCTAGCTACCAAAG+GGG + chr2_1:10817597-10817616 None:intergenic 35.0%
CTTAAAAGCTAGCTACCAAA+GGG + chr2_1:10817598-10817617 None:intergenic 35.0%
!!! CTTTGGTAGCTAGCTTTTAA+GGG - chr2_1:10817597-10817616 Msa0194570:intron 35.0%
TTGCAATTAGAACTGGTTGT+CGG - chr2_1:10817651-10817670 Msa0194570:intron 35.0%
GTTAGGGACTTGGATATTAT+AGG - chr2_1:10817777-10817796 Msa0194570:intron 35.0%
ACTGAGCATATTACTAGATG+GGG + chr2_1:10817814-10817833 None:intergenic 35.0%
CACTGAGCATATTACTAGAT+GGG + chr2_1:10817815-10817834 None:intergenic 35.0%
GTGATAAGTATCTAAGCACA+TGG + chr2_1:10817896-10817915 None:intergenic 35.0%
CCATTTCCAGGACAATATTA+AGG + chr2_1:10818151-10818170 None:intergenic 35.0%
CCTTAATATTGTCCTGGAAA+TGG - chr2_1:10818148-10818167 Msa0194570:intron 35.0%
ATATTCTCCAGGACAAAACT+CGG + chr2_1:10818296-10818315 None:intergenic 35.0%
!! AATGTTAGTCTGAGTTTTCC+AGG + chr2_1:10818371-10818390 None:intergenic 35.0%
TCATTAGTGCAAATAGTGAG+TGG + chr2_1:10818451-10818470 None:intergenic 35.0%
TAGTTCACAGTTGGATAAAC+TGG + chr2_1:10818595-10818614 None:intergenic 35.0%
TTCAGAAAAGGCAGCATATT+TGG + chr2_1:10818676-10818695 None:intergenic 35.0%
! AAATATGCTGCCTTTTCTGA+AGG - chr2_1:10818675-10818694 Msa0194570:intron 35.0%
TATGGAACATATCTTCAGGA+TGG - chr2_1:10818811-10818830 Msa0194570:intron 35.0%
TGCATAAGCATTTGTCACAT+AGG + chr2_1:10819061-10819080 None:intergenic 35.0%
ATACCTAAGAAGCTAGAACA+AGG + chr2_1:10819267-10819286 None:intergenic 35.0%
GAAAACATATCATGTGCTCT+TGG + chr2_1:10819459-10819478 None:intergenic 35.0%
TGGAAAAATCATTTCAAGGG+AGG - chr2_1:10819631-10819650 Msa0194570:intron 35.0%
!! CAAATAGATGACTTGCTTGT+TGG - chr2_1:10819771-10819790 Msa0194570:CDS 35.0%
TGTGTAGTAGAACCAGTAAA+TGG - chr2_1:10820050-10820069 Msa0194570:intron 35.0%
AATGCTTCTTCACCATTTAC+TGG + chr2_1:10820065-10820084 None:intergenic 35.0%
CGATTCGTTAGAACTTAGAA+CGG + chr2_1:10820225-10820244 None:intergenic 35.0%
TTAAGGATTGAATGACAGGT+CGG + chr2_1:10820432-10820451 None:intergenic 35.0%
! ACATGATACAGCTTTTGATG+AGG + chr2_1:10820494-10820513 None:intergenic 35.0%
TAGTGATGTTGATGTTGAAG+AGG - chr2_1:10820851-10820870 Msa0194570:CDS 35.0%
!! TTGTTTTGTCCATCTAGGAT+AGG - chr2_1:10821129-10821148 Msa0194570:CDS 35.0%
! TCTGATTTTATAGTCCCAGT+AGG + chr2_1:10821424-10821443 None:intergenic 35.0%
!! CTGAAGTATACCACTTTTCA+TGG + chr2_1:10821647-10821666 None:intergenic 35.0%
AAGTGGTATACTTCAGAAGT+AGG - chr2_1:10821651-10821670 Msa0194570:intron 35.0%
ACGTTATGTTCCATGAAAAG+TGG - chr2_1:10821679-10821698 Msa0194570:intron 35.0%
AAGTTCCAAATGAATGCAGA+GGG + chr2_1:10821840-10821859 None:intergenic 35.0%
TAAGTTCCAAATGAATGCAG+AGG + chr2_1:10821841-10821860 None:intergenic 35.0%
! CTTGTCCTTCAACCATTTTC+AGG - chr2_1:10815059-10815078 Msa0194570:three_prime_UTR 40.0%
TGGAACCTGAAAATGGTTGA+AGG + chr2_1:10815067-10815086 None:intergenic 40.0%
GTAGACATCAACATACTTGG+TGG - chr2_1:10815545-10815564 Msa0194570:intron 40.0%
TGTTGAGGGGAATGTTGAAT+TGG - chr2_1:10815968-10815987 Msa0194570:intron 40.0%
AATGTTGAATTGGATGACCC+TGG - chr2_1:10815978-10815997 Msa0194570:intron 40.0%
TGAACCTCAAGAAGATTCTG+AGG - chr2_1:10816019-10816038 Msa0194570:CDS 40.0%
AACTCCTCAGAATCTTCTTG+AGG + chr2_1:10816026-10816045 None:intergenic 40.0%
CTCGTAAGTGTTCCTTCTAT+CGG + chr2_1:10816161-10816180 None:intergenic 40.0%
AGAAAGAACAATGGTCCAGA+TGG - chr2_1:10816213-10816232 Msa0194570:intron 40.0%
AAACTAACCGTTTCAGTGTC+AGG + chr2_1:10816251-10816270 None:intergenic 40.0%
ACTGGACAAGTGAAGCTTTA+TGG - chr2_1:10816573-10816592 Msa0194570:intron 40.0%
AGAGCAGTTTCTGTTAACGT+TGG + chr2_1:10816606-10816625 None:intergenic 40.0%
!! TGCCATGGGAACTTGTTATA+AGG - chr2_1:10816920-10816939 Msa0194570:intron 40.0%
CTCCTTATAACAAGTTCCCA+TGG + chr2_1:10816925-10816944 None:intergenic 40.0%
CAAGAGAAACTGGAAAGGAT+TGG - chr2_1:10817011-10817030 Msa0194570:intron 40.0%
ATTCAGAATGGGTAAAGGCA+TGG - chr2_1:10817048-10817067 Msa0194570:intron 40.0%
CCATCATTACACGATACTCT+CGG + chr2_1:10817172-10817191 None:intergenic 40.0%
!! CGAGAGTATCGTGTAATGAT+GGG - chr2_1:10817170-10817189 Msa0194570:intron 40.0%
!! GAGAGTATCGTGTAATGATG+GGG - chr2_1:10817171-10817190 Msa0194570:intron 40.0%
ATCCTTTGGCAATGAGAATG+AGG - chr2_1:10817216-10817235 Msa0194570:intron 40.0%
TCCTTTGGCAATGAGAATGA+GGG - chr2_1:10817217-10817236 Msa0194570:intron 40.0%
CTGCTTAAACTTCTAGGTGT+AGG + chr2_1:10817409-10817428 None:intergenic 40.0%
TAGTCAACTTGATAGGGACT+TGG - chr2_1:10817528-10817547 Msa0194570:intron 40.0%
AGTCAACTTGATAGGGACTT+GGG - chr2_1:10817529-10817548 Msa0194570:intron 40.0%
TGATAGGGACTTGGGTATTA+TGG - chr2_1:10817537-10817556 Msa0194570:intron 40.0%
GATAGGGACTTGGGTATTAT+GGG - chr2_1:10817538-10817557 Msa0194570:intron 40.0%
CCTTAAAAGCTAGCTACCAA+AGG + chr2_1:10817599-10817618 None:intergenic 40.0%
!!! CCTTTGGTAGCTAGCTTTTA+AGG - chr2_1:10817596-10817615 Msa0194570:intron 40.0%
TCAATGGCAGTGCTATGTTA+GGG - chr2_1:10817761-10817780 Msa0194570:intron 40.0%
TATTACTAGATGGGGGACTT+GGG + chr2_1:10817806-10817825 None:intergenic 40.0%
ATATTACTAGATGGGGGACT+TGG + chr2_1:10817807-10817826 None:intergenic 40.0%
CTGAGCATATTACTAGATGG+GGG + chr2_1:10817813-10817832 None:intergenic 40.0%
CCACTGAGCATATTACTAGA+TGG + chr2_1:10817816-10817835 None:intergenic 40.0%
CCATCTAGTAATATGCTCAG+TGG - chr2_1:10817813-10817832 Msa0194570:intron 40.0%
! AGTGGAGTACTTAAGTTTCC+TGG - chr2_1:10817831-10817850 Msa0194570:intron 40.0%
TGGGAACCTTAATATTGTCC+TGG - chr2_1:10818142-10818161 Msa0194570:intron 40.0%
TTTCCCTTCTTTCTGCAGTA+TGG - chr2_1:10818560-10818579 Msa0194570:intron 40.0%
TTCCCTTCTTTCTGCAGTAT+GGG - chr2_1:10818561-10818580 Msa0194570:intron 40.0%
ATGAAGTGATTGACTACCGA+GGG - chr2_1:10818629-10818648 Msa0194570:intron 40.0%
!! AAAGGCAGCATATTTGGTGT+TGG + chr2_1:10818670-10818689 None:intergenic 40.0%
TCACTCTATGATTGATGTGC+TGG - chr2_1:10818864-10818883 Msa0194570:intron 40.0%
TGTGCTGGAATATCAAGCAT+AGG - chr2_1:10818879-10818898 Msa0194570:intron 40.0%
CTGGAATATCAAGCATAGGT+CGG - chr2_1:10818883-10818902 Msa0194570:intron 40.0%
ATATCAAGCATAGGTCGGTT+TGG - chr2_1:10818888-10818907 Msa0194570:intron 40.0%
!! TTGAGCTTATCTACTGGCTT+AGG - chr2_1:10818921-10818940 Msa0194570:intron 40.0%
!! GTTCCTTGTTCTAGCTTCTT+AGG - chr2_1:10819261-10819280 Msa0194570:intron 40.0%
GGAGGAGCTAGAAAAAATTC+TGG - chr2_1:10819649-10819668 Msa0194570:intron 40.0%
GCAAAAGACTGAACAAGTTG+AGG - chr2_1:10819676-10819695 Msa0194570:intron 40.0%
! AGACTGAACAAGTTGAGGTA+AGG - chr2_1:10819681-10819700 Msa0194570:intron 40.0%
!! TATGACTCGGTCTCTTCAAT+CGG - chr2_1:10819955-10819974 Msa0194570:CDS 40.0%
!! GCACATTCTGGAATTCATTG+AGG + chr2_1:10820292-10820311 None:intergenic 40.0%
! AATTCCAGAATGTGCTGACA+CGG - chr2_1:10820297-10820316 Msa0194570:intron 40.0%
ATGGTCACATGTCTATACTG+TGG + chr2_1:10820465-10820484 None:intergenic 40.0%
! GCTTTTGATGAGGTCGAAAA+TGG + chr2_1:10820484-10820503 None:intergenic 40.0%
ATGGCTAAAGCAGTCGATAT+TGG - chr2_1:10820670-10820689 Msa0194570:intron 40.0%
CTTTATTGACCAGGATGAAG+AGG - chr2_1:10820827-10820846 Msa0194570:CDS 40.0%
GTTGATGTTGAAGAGGTAGT+AGG - chr2_1:10820858-10820877 Msa0194570:CDS 40.0%
!! TACCTTTGATTTGCGAAGCT+GGG + chr2_1:10820973-10820992 None:intergenic 40.0%
!! ATACCTTTGATTTGCGAAGC+TGG + chr2_1:10820974-10820993 None:intergenic 40.0%
TTTGAACGCTTAACCCAGTT+TGG + chr2_1:10821364-10821383 None:intergenic 40.0%
GTTAAGCGTTCAAATCATGC+TGG - chr2_1:10821370-10821389 Msa0194570:CDS 40.0%
!! AAATCATGCTGGCTTGACTA+TGG - chr2_1:10821381-10821400 Msa0194570:CDS 40.0%
!! TTTGGCTGCATGTTTTGGAT+AGG + chr2_1:10821508-10821527 None:intergenic 40.0%
!!! TTGGTTTTGGCTGCATGTTT+TGG + chr2_1:10821513-10821532 None:intergenic 40.0%
CAGCCAAAACCAAAGAAAGA+GGG - chr2_1:10821520-10821539 Msa0194570:intron 40.0%
AATCCAAGAGGAAATCAGTG+AGG + chr2_1:10821585-10821604 None:intergenic 40.0%
TCAGTGGCAATAACTCAAGT+GGG + chr2_1:10821778-10821797 None:intergenic 40.0%
TTCAGTGGCAATAACTCAAG+TGG + chr2_1:10821779-10821798 None:intergenic 40.0%
TACATAAGGGACTGTTTCAG+TGG + chr2_1:10821794-10821813 None:intergenic 40.0%
AGTTCCAAATGAATGCAGAG+GGG + chr2_1:10821839-10821858 None:intergenic 40.0%
! GGACAAGTTGGGTAGAAGAT+TGG + chr2_1:10815046-10815065 None:intergenic 45.0%
! TCAACATACTTGGTGGGTGT+TGG - chr2_1:10815552-10815571 Msa0194570:intron 45.0%
TCAGGCCAATACTCAACTTC+AGG + chr2_1:10815807-10815826 None:intergenic 45.0%
!! GAAGTTGAGTATTGGCCTGA+AGG - chr2_1:10815807-10815826 Msa0194570:intron 45.0%
ACTTGCTCAACAGTTCCTTC+AGG + chr2_1:10815825-10815844 None:intergenic 45.0%
AAGGAACTGTTGAGCAAGTC+AGG - chr2_1:10815826-10815845 Msa0194570:intron 45.0%
AGGAACTGTTGAGCAAGTCA+GGG - chr2_1:10815827-10815846 Msa0194570:intron 45.0%
GAACCTAACGATTCTCCCAT+CGG + chr2_1:10815870-10815889 None:intergenic 45.0%
TCGTTAGGTTCTCCGTCATA+TGG - chr2_1:10815879-10815898 Msa0194570:intron 45.0%
CCAGGGTTACTACCATATGA+CGG + chr2_1:10815894-10815913 None:intergenic 45.0%
ATGGTAGTAACCCTGGTAGT+AGG - chr2_1:10815898-10815917 Msa0194570:intron 45.0%
AACTCTTCCTCCTACTACCA+GGG + chr2_1:10815911-10815930 None:intergenic 45.0%
TAACTCTTCCTCCTACTACC+AGG + chr2_1:10815912-10815931 None:intergenic 45.0%
ATTCCCCTCAACATTACCCT+CGG + chr2_1:10815961-10815980 None:intergenic 45.0%
CCAAAACCTCAGGAAAACCA+GGG + chr2_1:10815998-10816017 None:intergenic 45.0%
ACCAAAACCTCAGGAAAACC+AGG + chr2_1:10815999-10816018 None:intergenic 45.0%
TGAGGTTCAACCAAAACCTC+AGG + chr2_1:10816008-10816027 None:intergenic 45.0%
TGTTTATCAGTCTGAGCCTG+AGG - chr2_1:10816061-10816080 Msa0194570:CDS 45.0%
TACTCAGTCTCTTCTTCCTC+AGG + chr2_1:10816080-10816099 None:intergenic 45.0%
AGAAGGAACACTTACGAGTG+AGG - chr2_1:10816163-10816182 Msa0194570:intron 45.0%
GAAAGCCGGAGAAAGAACAA+TGG - chr2_1:10816204-10816223 Msa0194570:intron 45.0%
CTGGACCATTGTTCTTTCTC+CGG + chr2_1:10816212-10816231 None:intergenic 45.0%
AACAATGGTCCAGATGGCAA+AGG - chr2_1:10816219-10816238 Msa0194570:intron 45.0%
GAGAAGACCTGACACTGAAA+CGG - chr2_1:10816241-10816260 Msa0194570:intron 45.0%
GTGTCTGTGTATGCATTTGC+CGG - chr2_1:10816326-10816345 Msa0194570:intron 45.0%
! TCAGGTTTTCCTGAAAGCCA+TGG - chr2_1:10816545-10816564 Msa0194570:intron 45.0%
TTCCTTATAAAGATGGCGCC+TGG + chr2_1:10816637-10816656 None:intergenic 45.0%
CAAGTTCCCATGGCATATTG+TGG + chr2_1:10816915-10816934 None:intergenic 45.0%
! TTCCGATTTTTGCAGGCTTG+AGG - chr2_1:10816983-10817002 Msa0194570:intron 45.0%
AGCCTCAAGCCTGCAAAAAT+CGG + chr2_1:10816988-10817007 None:intergenic 45.0%
CTGAGCAAGAGAAACTGGAA+AGG - chr2_1:10817006-10817025 Msa0194570:intron 45.0%
ATACTCTCGGTCAGTTTGGT+GGG + chr2_1:10817159-10817178 None:intergenic 45.0%
!! CCGAGAGTATCGTGTAATGA+TGG - chr2_1:10817169-10817188 Msa0194570:intron 45.0%
TCATTGCCAAAGGATCCCTT+CGG + chr2_1:10817211-10817230 None:intergenic 45.0%
TCCCTCATTCTCATTGCCAA+AGG + chr2_1:10817221-10817240 None:intergenic 45.0%
TTTGGCAATGAGAATGAGGG+AGG - chr2_1:10817220-10817239 Msa0194570:intron 45.0%
TGTAGGGTCAAGAGGTTGTT+TGG + chr2_1:10817392-10817411 None:intergenic 45.0%
! TGCCCAGTGGAGTATTTAAG+TGG - chr2_1:10817561-10817580 Msa0194570:intron 45.0%
GTGGTTTGATTCTTCCCCTT+TGG - chr2_1:10817580-10817599 Msa0194570:intron 45.0%
!!! TGGTAGCTAGCTTTTAAGGG+CGG - chr2_1:10817600-10817619 Msa0194570:intron 45.0%
CAATTAGAACTGGTTGTCGG+CGG - chr2_1:10817654-10817673 Msa0194570:intron 45.0%
GCATTCTACGACGCTTTACT+CGG + chr2_1:10817720-10817739 None:intergenic 45.0%
CTCAATGGCAGTGCTATGTT+AGG - chr2_1:10817760-10817779 Msa0194570:intron 45.0%
ACTATAAAGGGGGAAGAACC+AGG + chr2_1:10817852-10817871 None:intergenic 45.0%
!!! TGAAGAGTTTTGGGGCTGAT+TGG - chr2_1:10818264-10818283 Msa0194570:intron 45.0%
!!! GTTTTGGGGCTGATTGGAAA+TGG - chr2_1:10818270-10818289 Msa0194570:intron 45.0%
TCCCTTCTTTCTGCAGTATG+GGG - chr2_1:10818562-10818581 Msa0194570:intron 45.0%
ACCCCATACTGCAGAAAGAA+GGG + chr2_1:10818566-10818585 None:intergenic 45.0%
CGGTAGTCAATCACTTCATC+TGG + chr2_1:10818628-10818647 None:intergenic 45.0%
GATGAAGTGATTGACTACCG+AGG - chr2_1:10818628-10818647 Msa0194570:intron 45.0%
TGAAGTGATTGACTACCGAG+GGG - chr2_1:10818630-10818649 Msa0194570:intron 45.0%
GTTCATGAAAATCTGCCCCT+CGG + chr2_1:10818648-10818667 None:intergenic 45.0%
!! TATGCTGCCTTTTCTGAAGG+AGG - chr2_1:10818678-10818697 Msa0194570:intron 45.0%
CTTTGTATGGTTCACCAGCT+CGG - chr2_1:10819829-10819848 Msa0194570:CDS 45.0%
TTTGTATGGTTCACCAGCTC+GGG - chr2_1:10819830-10819849 Msa0194570:CDS 45.0%
!! ATGACTCGGTCTCTTCAATC+GGG - chr2_1:10819956-10819975 Msa0194570:CDS 45.0%
CGCACACTGAAAATGTGCAA+AGG - chr2_1:10820103-10820122 Msa0194570:intron 45.0%
GAACGGTAAGTCGCTATATG+AGG + chr2_1:10820208-10820227 None:intergenic 45.0%
GACAGACATCGATGAAGCTA+TGG - chr2_1:10820651-10820670 Msa0194570:intron 45.0%
TGGCGAGTTCCATTCCAAAA+TGG - chr2_1:10820769-10820788 Msa0194570:CDS 45.0%
CATCACTATCCTCTTCATCC+TGG + chr2_1:10820839-10820858 None:intergenic 45.0%
TGTTGAAGAGGTAGTAGGAG+AGG - chr2_1:10820863-10820882 Msa0194570:CDS 45.0%
!! ACCTTTGATTTGCGAAGCTG+GGG + chr2_1:10820972-10820991 None:intergenic 45.0%
GCAGCCAAAACCAAAGAAAG+AGG - chr2_1:10821519-10821538 Msa0194570:intron 45.0%
!! GGACCCTCTTTCTTTGGTTT+TGG + chr2_1:10821526-10821545 None:intergenic 45.0%
GTCATAGGACCCTCTTTCTT+TGG + chr2_1:10821532-10821551 None:intergenic 45.0%
!! GAACCTCACTGATTTCCTCT+TGG - chr2_1:10821579-10821598 Msa0194570:intron 45.0%
AGCGCATGTTCCATGAAAAG+TGG - chr2_1:10821634-10821653 Msa0194570:intron 45.0%
GATACCCCTCTGCATTCATT+TGG - chr2_1:10821832-10821851 Msa0194570:intron 45.0%
GAGTTGAGTGAGCTTCTCTC+CGG - chr2_1:10814971-10814990 Msa0194570:three_prime_UTR 50.0%
GCAGTAACTGAAACGTCGTC+CGG + chr2_1:10814993-10815012 None:intergenic 50.0%
AGTTACATGGACTCCACCTC+TGG - chr2_1:10815744-10815763 Msa0194570:intron 50.0%
AATACTTGCTCTAGCACCCG+AGG + chr2_1:10815784-10815803 None:intergenic 50.0%
AACGATTCTCCCATCGGAGT+AGG + chr2_1:10815864-10815883 None:intergenic 50.0%
ACTCCGATGGGAGAATCGTT+AGG - chr2_1:10815864-10815883 Msa0194570:intron 50.0%
CCGTCATATGGTAGTAACCC+TGG - chr2_1:10815891-10815910 Msa0194570:intron 50.0%
GTAGTAACCCTGGTAGTAGG+AGG - chr2_1:10815901-10815920 Msa0194570:intron 50.0%
!! GTTTCTGGTTCTTCCTCCGA+GGG - chr2_1:10815942-10815961 Msa0194570:intron 50.0%
TTCCTCCGAGGGTAATGTTG+AGG - chr2_1:10815953-10815972 Msa0194570:intron 50.0%
TCCTCCGAGGGTAATGTTGA+GGG - chr2_1:10815954-10815973 Msa0194570:intron 50.0%
!! CCCTGGTTTTCCTGAGGTTT+TGG - chr2_1:10815995-10816014 Msa0194570:CDS 50.0%
CACTTACGAGTGAGGAACTG+TGG - chr2_1:10816171-10816190 Msa0194570:intron 50.0%
TTACGAGTGAGGAACTGTGG+TGG - chr2_1:10816174-10816193 Msa0194570:intron 50.0%
! GTGAGGAACTGTGGTGGAAT+TGG - chr2_1:10816180-10816199 Msa0194570:intron 50.0%
! GTGGTGGAATTGGAGAAAGC+CGG - chr2_1:10816190-10816209 Msa0194570:intron 50.0%
AGGTCTTCTCCTTTGCCATC+TGG + chr2_1:10816231-10816250 None:intergenic 50.0%
CAGTTTCTGCCATGGCTTTC+AGG + chr2_1:10816557-10816576 None:intergenic 50.0%
CTGAAAGCCATGGCAGAAAC+TGG - chr2_1:10816555-10816574 Msa0194570:intron 50.0%
CACTTGTCCAGTTTCTGCCA+TGG + chr2_1:10816565-10816584 None:intergenic 50.0%
AAACTGCTCTTTACCGAGCC+AGG - chr2_1:10816616-10816635 Msa0194570:intron 50.0%
TATAAAGATGGCGCCTGGCT+CGG + chr2_1:10816632-10816651 None:intergenic 50.0%
AGCCAGGCGCCATCTTTATA+AGG - chr2_1:10816632-10816651 Msa0194570:intron 50.0%
TGAGGCTGAGCAAGAGAAAC+TGG - chr2_1:10817001-10817020 Msa0194570:intron 50.0%
!! CAGAAGCACTTCGAAGAGAC+TGG - chr2_1:10817098-10817117 Msa0194570:intron 50.0%
GATACTCTCGGTCAGTTTGG+TGG + chr2_1:10817160-10817179 None:intergenic 50.0%
CACGATACTCTCGGTCAGTT+TGG + chr2_1:10817163-10817182 None:intergenic 50.0%
GACTGATGTTCGCATCCGAA+GGG - chr2_1:10817193-10817212 Msa0194570:intron 50.0%
CTTCTAGGTGTAGGGTCAAG+AGG + chr2_1:10817400-10817419 None:intergenic 50.0%
!!! GGTAGCTAGCTTTTAAGGGC+GGG - chr2_1:10817601-10817620 Msa0194570:intron 50.0%
AATGCCAGTCGCTGAGATGT+CGG - chr2_1:10817735-10817754 Msa0194570:intron 50.0%
GCAGTGCTATGTTAGGGACT+TGG - chr2_1:10817767-10817786 Msa0194570:intron 50.0%
GACAAAACTCGGCCATTTCC+AGG + chr2_1:10818163-10818182 None:intergenic 50.0%
!! GAAATGGCCGAGTTTTGTCC+TGG - chr2_1:10818164-10818183 Msa0194570:intron 50.0%
!! GAAATGGCCGAGTTTTGTCC+TGG - chr2_1:10818164-10818183 Msa0194570:intron 50.0%
CACCCCATACTGCAGAAAGA+AGG + chr2_1:10818567-10818586 None:intergenic 50.0%
CTTCTTTCTGCAGTATGGGG+TGG - chr2_1:10818565-10818584 Msa0194570:intron 50.0%
TCGGACTGCTTGAGAGCTTA+TGG - chr2_1:10818950-10818969 Msa0194570:intron 50.0%
CAACTTCGCATGTCGTTGTC+TGG - chr2_1:10820749-10820768 Msa0194570:CDS 50.0%
AGAGGTAGTAGGAGAGGAAG+AGG - chr2_1:10820869-10820888 Msa0194570:CDS 50.0%
AGTAGGAGAGGAAGAGGTAG+AGG - chr2_1:10820875-10820894 Msa0194570:CDS 50.0%
AGAGGGAGATGAAGAGGAAG+AGG - chr2_1:10820899-10820918 Msa0194570:CDS 50.0%
TCCCCAGCTTCGCAAATCAA+AGG - chr2_1:10820968-10820987 Msa0194570:CDS 50.0%
GAAAGAGGGTCCTATGACAC+TGG - chr2_1:10821534-10821553 Msa0194570:intron 50.0%
ACAGCCTCATCCAGTGTCAT+AGG + chr2_1:10821547-10821566 None:intergenic 50.0%
ATGACACTGGATGAGGCTGT+AGG - chr2_1:10821547-10821566 Msa0194570:intron 50.0%
TTGAGCAAGTCAGGGCTGCT+AGG - chr2_1:10815835-10815854 Msa0194570:intron 55.0%
TGAGCAAGTCAGGGCTGCTA+GGG - chr2_1:10815836-10815855 Msa0194570:intron 55.0%
!! GGTTTCTGGTTCTTCCTCCG+AGG - chr2_1:10815941-10815960 Msa0194570:intron 55.0%
CCTCCGAGGGTAATGTTGAG+GGG - chr2_1:10815955-10815974 Msa0194570:intron 55.0%
!! GGATGACCCTGGTTTTCCTG+AGG - chr2_1:10815989-10816008 Msa0194570:CDS 55.0%
GGACTGATGTTCGCATCCGA+AGG - chr2_1:10817192-10817211 Msa0194570:intron 55.0%
TCGCATCCGAAGGGATCCTT+TGG - chr2_1:10817202-10817221 Msa0194570:intron 55.0%
TGGGTATTATGGGTGCCCAG+TGG - chr2_1:10817548-10817567 Msa0194570:intron 55.0%
GGCTCGGAAAGGATTACCTG+CGG - chr2_1:10817675-10817694 Msa0194570:intron 55.0%
TCGGAAAGGATTACCTGCGG+AGG - chr2_1:10817678-10817697 Msa0194570:intron 55.0%
CGGAAAGGATTACCTGCGGA+GGG - chr2_1:10817679-10817698 Msa0194570:intron 55.0%
GGAAAGGATTACCTGCGGAG+GGG - chr2_1:10817680-10817699 Msa0194570:intron 55.0%
!! GCTGAGATGTCGGCTCTCAA+TGG - chr2_1:10817745-10817764 Msa0194570:intron 55.0%
!! CTACTGGCTTAGGCACCTGT+CGG - chr2_1:10818931-10818950 Msa0194570:intron 55.0%
AAGCTCTCAAGCAGTCCGAC+AGG + chr2_1:10818949-10818968 None:intergenic 55.0%
TCACTTTCTGACACCCGAGC+TGG + chr2_1:10819846-10819865 None:intergenic 55.0%
TGTGCCGTGTCAGCACATTC+TGG + chr2_1:10820304-10820323 None:intergenic 55.0%
AGAGGAAGAGGTAGAGGCAG+AGG - chr2_1:10820881-10820900 Msa0194570:CDS 55.0%
GAGGAAGAGGTAGAGGCAGA+GGG - chr2_1:10820882-10820901 Msa0194570:CDS 55.0%
AGAGGCAGAGGGAGATGAAG+AGG - chr2_1:10820893-10820912 Msa0194570:CDS 55.0%
GGGTCCTATGACACTGGATG+AGG - chr2_1:10821540-10821559 Msa0194570:intron 55.0%
CATGGAACATGCGCTTCACG+AGG + chr2_1:10821629-10821648 None:intergenic 55.0%
CACCTCTGGTCAGCTTGAGC+CGG - chr2_1:10815758-10815777 Msa0194570:intron 60.0%
CCCCTCAACATTACCCTCGG+AGG + chr2_1:10815958-10815977 None:intergenic 60.0%
AGAACTGGTTGTCGGCGGCT+CGG - chr2_1:10817659-10817678 Msa0194570:intron 60.0%
TTACCTGCGGAGGGGCAGAT+TGG - chr2_1:10817688-10817707 Msa0194570:intron 60.0%
TTTCCAATCTGCCCCTCCGC+AGG + chr2_1:10817694-10817713 None:intergenic 60.0%
GCGGAGGGGCAGATTGGAAA+TGG - chr2_1:10817694-10817713 Msa0194570:intron 60.0%
AGAGCCGACATCTCAGCGAC+TGG + chr2_1:10817742-10817761 None:intergenic 60.0%
GGAACATGCGCTTCACGAGG+AGG + chr2_1:10821626-10821645 None:intergenic 60.0%
CGGCTCAAGCTGACCAGAGG+TGG + chr2_1:10815760-10815779 None:intergenic 65.0%
TGGTCAGCTTGAGCCGGCCT+CGG - chr2_1:10815764-10815783 Msa0194570:intron 65.0%
CTTGCTCTAGCACCCGAGGC+CGG + chr2_1:10815780-10815799 None:intergenic 65.0%
! TGCTAGGGCGCCTACTCCGA+TGG - chr2_1:10815851-10815870 Msa0194570:intron 65.0%
! GCTAGGGCGCCTACTCCGAT+GGG - chr2_1:10815852-10815871 Msa0194570:intron 65.0%
! TGGTTGTCGGCGGCTCGGAA+AGG - chr2_1:10817664-10817683 Msa0194570:intron 65.0%
! GGCCGGCTCAAGCTGACCAG+AGG + chr2_1:10815763-10815782 None:intergenic 70.0%
GGTCAGCTTGAGCCGGCCTC+GGG - chr2_1:10815765-10815784 Msa0194570:intron 70.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 10814895 10822082 10814895 ID=Msa0194570;Name=Msa0194570
chr2_1 mRNA 10814895 10822082 10814895 ID=Msa0194570-mRNA-1;Parent=Msa0194570;Name=Msa0194570-mRNA-1;_AED=0.01;_eAED=0.01;_QI=132|1|1|1|1|1|9|464|543
chr2_1 exon 10814895 10815454 10814895 ID=Msa0194570-mRNA-1:exon:4879;Parent=Msa0194570-mRNA-1
chr2_1 exon 10815988 10816137 10815988 ID=Msa0194570-mRNA-1:exon:4878;Parent=Msa0194570-mRNA-1
chr2_1 exon 10816275 10816328 10816275 ID=Msa0194570-mRNA-1:exon:4877;Parent=Msa0194570-mRNA-1
chr2_1 exon 10817280 10817348 10817280 ID=Msa0194570-mRNA-1:exon:4876;Parent=Msa0194570-mRNA-1
chr2_1 exon 10818278 10818399 10818278 ID=Msa0194570-mRNA-1:exon:4875;Parent=Msa0194570-mRNA-1
chr2_1 exon 10819720 10819979 10819720 ID=Msa0194570-mRNA-1:exon:4874;Parent=Msa0194570-mRNA-1
chr2_1 exon 10820316 10820428 10820316 ID=Msa0194570-mRNA-1:exon:4873;Parent=Msa0194570-mRNA-1
chr2_1 exon 10820715 10821428 10820715 ID=Msa0194570-mRNA-1:exon:4872;Parent=Msa0194570-mRNA-1
chr2_1 exon 10821897 10822082 10821897 ID=Msa0194570-mRNA-1:exon:4871;Parent=Msa0194570-mRNA-1
chr2_1 five_prime_UTR 10821951 10822082 10821951 ID=Msa0194570-mRNA-1:five_prime_utr;Parent=Msa0194570-mRNA-1
chr2_1 CDS 10821897 10821950 10821897 ID=Msa0194570-mRNA-1:cds;Parent=Msa0194570-mRNA-1
chr2_1 CDS 10820715 10821428 10820715 ID=Msa0194570-mRNA-1:cds;Parent=Msa0194570-mRNA-1
chr2_1 CDS 10820316 10820428 10820316 ID=Msa0194570-mRNA-1:cds;Parent=Msa0194570-mRNA-1
chr2_1 CDS 10819720 10819979 10819720 ID=Msa0194570-mRNA-1:cds;Parent=Msa0194570-mRNA-1
chr2_1 CDS 10818278 10818399 10818278 ID=Msa0194570-mRNA-1:cds;Parent=Msa0194570-mRNA-1
chr2_1 CDS 10817280 10817348 10817280 ID=Msa0194570-mRNA-1:cds;Parent=Msa0194570-mRNA-1
chr2_1 CDS 10816275 10816328 10816275 ID=Msa0194570-mRNA-1:cds;Parent=Msa0194570-mRNA-1
chr2_1 CDS 10815988 10816137 10815988 ID=Msa0194570-mRNA-1:cds;Parent=Msa0194570-mRNA-1
chr2_1 CDS 10815359 10815454 10815359 ID=Msa0194570-mRNA-1:cds;Parent=Msa0194570-mRNA-1
chr2_1 three_prime_UTR 10814895 10815358 10814895 ID=Msa0194570-mRNA-1:three_prime_utr;Parent=Msa0194570-mRNA-1
Gene Sequence

>Msa0194570

ATGTCTTCAATTCAAGCCAATCTTCTACCCAACTTGTCCTTCAACCATTTTCAGACATCAACATACTTGGTGGGTGTTGGCAATTTACAAAGTAGAGTTGGTTTCAGAAAATCAAGAAAGAAGTTACCTTCATATAGTTGCATAAGATGTGAAAAGAATGATGAAATAAAGAAAGATGAAGTAAACAAAGATGAAGAAAATAAAGATGAAGTTATTGATTATGTGACAGTTGAACGTCCACCTTATTATAGTTACATGGACTCCACCTCTGGTCAGCTTGAGCCGGCCTCGGGTGCTAGAGCAAGTATTCCTGAAGTTGAGTATTGGCCTGAAGGAACTGTTGAGCAAGTCAGGGCTGCTAGGGCGCCTACTCCGATGGGAGAATCGTTAGGTTCTCCGTCATATGGTAGTAACCCTGGTAGTAGGAGGAAGAGTTATAGAACTTCGGTTTCTGGTTCTTCCTCCGAGGGTAATGTTGAGGGGAATGTTGAATTGGATGACCCTGGTTTTCCTGAGGTTTTGGTTGAACCTCAAGAAGATTCTGAGGAGTTCACGTCCGACTATGTTGTTTATCAGTCTGAGCCTGAGGAAGAAGAGACTGAGTACAAACTTGATAAGAAATTTGGAGCTCCTCATCCATTTATTGATCCGAAAATTAAAAAGCCGATAGAAGGAACACTTACGAGTGAGGAACTGTGGTGGAATTGGAGAAAGCCGGAGAAAGAACAATGGTCCAGATGGCAAAGGAGAAGACCTGACACTGAAACGGTTTTCCTGAAAGCCATGGCAGAAACTGGACAAGTGAAGCTTTATGGTGAAGAGCCAACGTTAACAGAAACTGCTCTTTACCGAGCCAGGCGCCATCTTTATAAGGAAGAAAGGCTTGAGGCTGAGCAAGAGAAACTGGAAAGGATTGGTCCAATTGCGTACTATTCAGAATGGGTAAAGGCATGGAAGAGAGACACATCTCGTGAAGCTATTCAGAAGCACTTCGAAGAGACTGGTGAAGATGAAACCACTCAACTAATTGAAATGTTTTCCCACCAAACTGACCGAGAGTATCGTGTAATGATGGGGACTGATGTTCGCATCCGAAGGGATCCTTTGGCAATGAGAATGAGGGAGGATCAGATAAAGCAAATATGGGGTGGAGATCCAGTTTATCCAACTGTGAACTATATTCAAGATCCAGATGAAGTGATTGACTACCGAGGGGCAGATTTTCATGAACCAACACCAAATATGCTGCCTTTTCTGAAGGAGCATGGAAAAATCATTTCAAGGGAGGAGCTAGAAAAAATTCTGGAAAAGCAAAAGACTGAACAAGTTGAGGTGACAGACATCGATGAAGCTATGGCTAAAGCAGTCGATATTGGTGAAAATGATGATGAAGAGGATAGTGATGTTGATGTTGAAGAGGTAGTAGGAGAGGAAGAGGTAGAGGCAGAGGGAGATGAAGAGGAAGAGGAAGACGAATCAAAGATTAATCGTAATTGGAGTGTTTTGAAAACTACTCCCCAGCTTCGCAAATCAAAGCCAAAACCAAAGAAAGAGGGTCCTATGACACTGGATGAGGCTGTAGGTGATTCTGAGAACCTCACTGATTTCCTCTTGGATTTTGAAGAAGAATGA

Protein sequence

>Msa0194570

MSSIQANLLPNLSFNHFQTSTYLVGVGNLQSRVGFRKSRKKLPSYSCIRCEKNDEIKKDEVNKDEENKDEVIDYVTVERPPYYSYMDSTSGQLEPASGARASIPEVEYWPEGTVEQVRAARAPTPMGESLGSPSYGSNPGSRRKSYRTSVSGSSSEGNVEGNVELDDPGFPEVLVEPQEDSEEFTSDYVVYQSEPEEEETEYKLDKKFGAPHPFIDPKIKKPIEGTLTSEELWWNWRKPEKEQWSRWQRRRPDTETVFLKAMAETGQVKLYGEEPTLTETALYRARRHLYKEERLEAEQEKLERIGPIAYYSEWVKAWKRDTSREAIQKHFEETGEDETTQLIEMFSHQTDREYRVMMGTDVRIRRDPLAMRMREDQIKQIWGGDPVYPTVNYIQDPDEVIDYRGADFHEPTPNMLPFLKEHGKIISREELEKILEKQKTEQVEVTDIDEAMAKAVDIGENDDEEDSDVDVEEVVGEEEVEAEGDEEEEEDESKINRNWSVLKTTPQLRKSKPKPKKEGPMTLDEAVGDSENLTDFLLDFEEE*