AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0226800

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0226800 MtrunA17_Chr2g0333221 97.206 501 9 2 1 501 1 496 0.0 986
Msa0226800 MtrunA17_Chr6g0478651 46.204 461 228 8 36 484 19 471 1.12e-131 392
Msa0226800 MtrunA17_Chr3g0123861 48.762 404 191 5 33 430 35 428 2.50e-127 378
Msa0226800 MtrunA17_Chr4g0010781 35.897 351 207 6 76 424 87 421 2.56e-58 199
Msa0226800 MtrunA17_Chr5g0426951 35.467 375 218 7 63 428 64 423 3.72e-58 199
Msa0226800 MtrunA17_Chr3g0087741 32.240 366 209 8 73 427 87 424 8.96e-55 190
Msa0226800 MtrunA17_Chr8g0334811 34.857 350 203 9 73 413 12 345 5.64e-51 179
Msa0226800 MtrunA17_Chr2g0322181 30.110 362 227 9 73 425 11 355 1.38e-32 129
Msa0226800 MtrunA17_Chr4g0025401 30.387 362 224 9 73 425 11 353 8.56e-31 124
Msa0226800 MtrunA17_Chr7g0269841 27.671 365 207 11 67 421 19 336 1.89e-28 115
Msa0226800 MtrunA17_Chr4g0040501 28.191 376 210 12 75 427 4 342 4.41e-25 106
Msa0226800 MtrunA17_Chr2g0282741 48.624 109 40 3 75 167 4 112 2.84e-21 95.1
Msa0226800 MtrunA17_Chr2g0324921 42.609 115 44 3 75 167 4 118 7.71e-18 84.7
Msa0226800 MtrunA17_Chr2g0282761 56.000 75 31 1 75 147 4 78 1.16e-17 84.3
Msa0226800 MtrunA17_Chr7g0242951 54.286 70 32 0 71 140 23 92 3.45e-17 84.3
Msa0226800 MtrunA17_Chr3g0138471 41.818 110 58 2 75 178 4 113 8.22e-17 81.6
Msa0226800 MtrunA17_Chr4g0006391 42.727 110 46 3 75 167 4 113 1.67e-16 80.9
Msa0226800 MtrunA17_Chr2g0295821 39.640 111 61 1 65 169 94 204 3.86e-16 80.1
Msa0226800 MtrunA17_Chr7g0253281 53.968 63 29 0 75 137 54 116 1.83e-15 77.0
Msa0226800 MtrunA17_Chr6g0460411 45.349 86 36 2 75 154 2 82 2.16e-14 72.4
Msa0226800 MtrunA17_Chr6g0460461 45.349 86 36 2 75 154 2 82 2.45e-14 72.4
Msa0226800 MtrunA17_Chr2g0295831 50.000 64 32 0 74 137 109 172 3.84e-14 72.0
Msa0226800 MtrunA17_Chr5g0415731 40.594 101 51 2 75 166 5 105 4.32e-14 69.7
Msa0226800 MtrunA17_Chr7g0263971 55.385 65 27 1 75 137 369 433 4.77e-14 74.3
Msa0226800 MtrunA17_Chr1g0159491 44.595 74 40 1 75 147 6 79 2.11e-13 65.5
Msa0226800 MtrunA17_Chr6g0460381 45.588 68 31 1 75 136 3 70 4.98e-13 68.2
Msa0226800 MtrunA17_Chr5g0393371 38.889 108 62 3 74 177 5 112 6.14e-13 70.5
Msa0226800 MtrunA17_Chr3g0093111 32.075 159 66 4 75 191 2 160 8.14e-13 69.3
Msa0226800 MtrunA17_Chr4g0021141 50.000 66 32 1 75 139 22 87 1.59e-12 64.7
Msa0226800 MtrunA17_Chr2g0328581 50.000 70 34 1 77 146 77 145 2.10e-12 66.2
Msa0226800 MtrunA17_Chr8g0378161 39.744 78 44 1 69 143 54 131 2.75e-12 65.9
Msa0226800 MtrunA17_Chr3g0091361 47.297 74 37 1 73 144 3 76 4.71e-12 65.5
Msa0226800 MtrunA17_Chr1g0209551 48.571 70 35 1 71 139 12 81 5.10e-12 67.8
Msa0226800 MtrunA17_Chr5g0399201 40.741 81 44 1 75 151 12 92 5.21e-12 68.2
Msa0226800 MtrunA17_Chr5g0414471 48.611 72 36 1 75 145 25 96 5.83e-12 67.4
Msa0226800 MtrunA17_Chr5g0405521 49.231 65 30 1 76 137 73 137 7.03e-12 63.9
Msa0226800 MtrunA17_Chr5g0405501 45.070 71 36 1 70 137 66 136 7.85e-12 63.5
Msa0226800 MtrunA17_Chr5g0427221 36.458 96 49 2 45 139 29 113 9.57e-12 62.8
Msa0226800 MtrunA17_Chr8g0371891 50.000 64 29 1 77 137 49 112 1.52e-11 62.4
Msa0226800 MtrunA17_Chr1g0159511 37.755 98 53 2 74 170 5 95 3.95e-11 64.7
Msa0226800 MtrunA17_Chr1g0173931 50.000 66 28 2 77 139 40 103 4.51e-11 63.9
Msa0226800 MtrunA17_Chr8g0352451 41.935 93 46 2 76 167 73 158 4.73e-11 64.7
Msa0226800 MtrunA17_Chr4g0010801 35.537 121 71 4 214 332 49 164 4.84e-11 62.4
Msa0226800 MtrunA17_Chr1g0206121 41.429 70 41 0 67 136 27 96 6.47e-11 63.5
Msa0226800 MtrunA17_Chr4g0061421 38.462 104 56 2 76 174 9 109 8.10e-11 64.7
Msa0226800 MtrunA17_Chr2g0307061 43.478 69 39 0 75 143 110 178 8.55e-11 63.5
Msa0226800 MtrunA17_Chr5g0405491 50.000 64 29 1 77 137 73 136 8.89e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0226800 AT1G80030.2 71.074 484 129 3 18 501 28 500 0.0 672
Msa0226800 AT1G80030.3 71.074 484 129 3 18 501 28 500 0.0 672
Msa0226800 AT1G80030.1 71.074 484 129 3 18 501 28 500 0.0 672
Msa0226800 AT1G80030.4 70.638 470 127 3 18 487 28 486 0.0 643
Msa0226800 AT2G22360.1 50.119 421 187 6 31 440 34 442 2.00e-133 394
Msa0226800 AT4G39960.1 50.728 412 187 6 30 430 31 437 2.03e-130 386
Msa0226800 AT4G39960.2 50.728 412 187 6 30 430 31 437 2.03e-130 386
Msa0226800 AT3G17830.1 50.811 370 172 3 64 427 52 417 9.86e-126 377
Msa0226800 AT5G48030.1 34.390 410 238 7 32 428 48 439 7.47e-68 225
Msa0226800 AT1G28210.3 33.699 365 211 7 71 428 44 384 4.09e-57 195
Msa0226800 AT1G28210.1 33.699 365 211 7 71 428 44 384 5.30e-57 195
Msa0226800 AT1G28210.2 33.699 365 211 7 71 428 44 384 7.71e-57 195
Msa0226800 AT5G22060.1 31.768 362 221 11 73 425 12 356 4.94e-42 155
Msa0226800 AT3G44110.1 31.452 372 226 10 73 435 12 363 7.27e-37 141
Msa0226800 AT3G44110.2 31.657 338 204 9 73 401 12 331 5.46e-34 131
Msa0226800 AT3G62600.1 28.150 373 209 13 67 427 19 344 3.13e-28 115
Msa0226800 AT5G01390.1 25.594 379 210 10 75 429 4 334 5.22e-22 97.4
Msa0226800 AT1G59725.1 27.487 382 190 13 75 427 4 327 5.99e-20 91.3
Msa0226800 AT5G01390.3 36.872 179 81 8 75 232 4 171 3.15e-19 87.4
Msa0226800 AT2G20560.1 44.144 111 44 3 75 167 4 114 4.09e-19 89.0
Msa0226800 AT5G25530.2 43.902 123 59 3 75 187 4 126 6.21e-19 88.6
Msa0226800 AT4G28480.2 46.535 101 37 2 75 158 4 104 2.03e-18 86.3
Msa0226800 AT4G28480.1 46.535 101 37 2 75 158 4 104 3.28e-18 86.7
Msa0226800 AT5G01390.2 40.000 135 57 5 75 188 4 135 2.07e-17 82.8
Msa0226800 AT5G01390.4 39.844 128 56 4 75 181 4 131 4.17e-17 81.3
Msa0226800 AT3G08910.1 52.703 74 33 1 75 146 4 77 1.22e-16 81.3
Msa0226800 AT5G25530.1 41.221 131 59 4 75 187 4 134 2.06e-16 80.9
Msa0226800 AT1G10350.1 37.500 120 54 3 75 173 4 123 3.88e-16 80.1
Msa0226800 AT3G08970.1 52.857 70 33 0 71 140 23 92 5.14e-16 81.3
Msa0226800 AT3G08970.2 52.857 70 33 0 71 140 23 92 5.14e-16 81.3
Msa0226800 AT3G47940.1 52.703 74 32 1 75 145 4 77 8.21e-15 76.3
Msa0226800 AT1G59980.2 52.941 68 31 1 77 143 25 92 9.03e-15 76.3
Msa0226800 AT4G13830.3 37.324 142 74 6 22 149 3 143 9.68e-15 73.2
Msa0226800 AT4G13830.1 37.324 142 74 6 22 149 3 143 1.17e-14 72.0
Msa0226800 AT1G59980.1 52.941 68 31 1 77 143 25 92 1.72e-14 75.9
Msa0226800 AT2G41000.2 45.055 91 40 2 75 159 3 89 1.96e-14 72.8
Msa0226800 AT4G13830.2 37.324 142 74 6 22 149 3 143 1.96e-14 72.4
Msa0226800 AT2G41000.1 45.055 91 40 2 75 159 3 89 4.81e-14 70.9
Msa0226800 AT2G17880.1 42.268 97 53 1 44 137 37 133 6.62e-14 70.1
Msa0226800 AT4G39150.3 43.299 97 52 2 74 167 5 101 1.19e-13 72.8
Msa0226800 AT4G39150.1 43.299 97 52 2 74 167 5 101 1.19e-13 72.8
Msa0226800 AT4G39150.2 43.299 97 52 2 74 167 5 101 1.19e-13 72.8
Msa0226800 AT1G56300.2 44.118 68 33 2 74 136 12 79 1.54e-12 64.7
Msa0226800 AT5G03160.1 49.231 65 31 1 75 137 370 434 1.80e-12 69.7
Msa0226800 AT5G18140.1 47.619 63 33 0 75 137 77 139 2.51e-12 68.6
Msa0226800 AT5G49060.2 44.776 67 37 0 73 139 97 163 3.92e-12 68.2
Msa0226800 AT5G49060.1 44.776 67 37 0 73 139 97 163 3.92e-12 68.2
Msa0226800 AT2G21510.5 40.206 97 55 2 74 167 5 101 4.62e-12 67.8
Msa0226800 AT5G59610.2 47.436 78 41 0 58 135 56 133 4.79e-12 66.6
Msa0226800 AT2G21510.3 40.000 95 49 2 74 167 5 92 5.16e-12 67.8
Msa0226800 AT2G21510.1 40.000 95 49 2 74 167 5 92 5.16e-12 67.8
Msa0226800 AT2G21510.2 40.000 95 49 2 74 167 5 92 5.75e-12 67.8
Msa0226800 AT2G21510.4 40.000 95 49 2 74 167 5 92 5.75e-12 67.8
Msa0226800 AT5G59610.1 47.436 78 41 0 58 135 56 133 6.75e-12 66.2
Msa0226800 AT5G59610.4 47.436 78 41 0 58 135 56 133 6.75e-12 66.2
Msa0226800 AT5G59610.3 47.436 78 41 0 58 135 56 133 7.03e-12 66.6
Msa0226800 AT5G59610.5 47.436 78 41 0 58 135 56 133 7.03e-12 66.6
Msa0226800 AT1G24120.1 40.217 92 44 2 75 155 20 111 9.59e-12 67.4
Msa0226800 AT2G35720.1 41.558 77 41 1 75 147 15 91 1.08e-11 67.4
Msa0226800 AT4G36040.1 41.000 100 42 3 63 148 56 152 1.14e-11 63.5
Msa0226800 AT1G76700.1 37.963 108 63 3 74 177 5 112 1.70e-11 66.6
Msa0226800 AT1G56300.1 44.118 68 33 2 74 136 12 79 2.05e-11 62.8
Msa0226800 AT1G68370.1 48.571 70 35 1 71 139 13 82 3.69e-11 65.5
Msa0226800 AT5G06910.1 33.333 123 67 3 77 195 31 142 3.89e-11 64.3

Find 180 sgRNAs with CRISPR-Local

Find 645 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAACTTGTTGAAGAATATTT+TGG 0.193257 2_1:+77285077 Msa0226800:three_prime_UTR
TTCTTTACCAGTGGCGGATT+TGG 0.214923 2_1:-77276666 None:intergenic
TCCCCGTCACCTCCACAATT+TGG 0.228947 2_1:-77281283 None:intergenic
GTCCTTCCCCGCTGCATTTA+CGG 0.238343 2_1:-77281324 None:intergenic
AGAATATAGTTTACCTGATT+AGG 0.248681 2_1:+77284876 Msa0226800:three_prime_UTR
ATATCATCTCTTTGAATTCC+TGG 0.264263 2_1:-77282815 None:intergenic
TCTAGTTCAATGGAATTATT+AGG 0.265383 2_1:+77284838 Msa0226800:exon
CAGTTATCTAGAAGCTATAC+TGG 0.269288 2_1:+77282862 Msa0226800:CDS
TTTGTTACACTGGTAAATTT+TGG 0.286887 2_1:+77285033 Msa0226800:three_prime_UTR
GTAGAAAAGCCGCCCATATT+TGG 0.287462 2_1:-77279577 None:intergenic
ATGGGTTCTGCTGGCTGAAC+TGG 0.292044 2_1:-77276268 None:intergenic
AGGACCGAACAAACACCTTT+TGG 0.304659 2_1:+77280471 Msa0226800:CDS
CAGAAGATGAAGATGACTTA+TGG 0.309685 2_1:+77284235 Msa0226800:CDS
CCTCTCAAACCCAAATGTTA+TGG 0.320594 2_1:-77285319 None:intergenic
ACTCATTACCTAATACGTTT+TGG 0.325668 2_1:-77283759 None:intergenic
TTACAATACCAAAACGTATT+AGG 0.326918 2_1:+77283751 Msa0226800:CDS
TGCAGGACTTTCCTTACTTC+CGG 0.333362 2_1:-77284160 None:intergenic
AGGCATCACATGTTTCTAAA+TGG 0.335033 2_1:-77280374 None:intergenic
GACTGTTGCTGTTGGACTTT+CGG 0.337289 2_1:-77284193 None:intergenic
GAATATAGTTTACCTGATTA+GGG 0.341035 2_1:+77284877 Msa0226800:three_prime_UTR
TCTTTACCAGTGGCGGATTT+GGG 0.343685 2_1:-77276665 None:intergenic
TCATATAGTCTCTCCCCTTT+CGG 0.351632 2_1:-77284931 None:intergenic
GCAATAAGCCACAACTTATC+TGG 0.354151 2_1:+77276189 Msa0226800:five_prime_UTR
ACCATGGATCCATCTGGATT+TGG 0.361587 2_1:+77279598 Msa0226800:CDS
TCTTCATCTTCTGATTTCTC+TGG 0.365886 2_1:-77284225 None:intergenic
TTAAACTTCACTTATGCATA+AGG 0.366647 2_1:-77285204 None:intergenic
CACTTGTGGTGGCAGGGGTC+AGG 0.367313 2_1:+77280443 Msa0226800:CDS
CTCTCAAACCCAAATGTTAT+GGG 0.377169 2_1:-77285318 None:intergenic
AGAGAATTTAGTATTAGAGT+TGG 0.379035 2_1:-77276570 None:intergenic
ATTGACGGTCTGTTTAATTT+CGG 0.379497 2_1:-77283699 None:intergenic
TCTCTAGTGCAACCTCTTCA+AGG 0.383207 2_1:-77285104 None:intergenic
GCGTCGTAGTACTGTTACTA+AGG 0.387946 2_1:+77279627 Msa0226800:CDS
CCAGGTTCCTTGTTCACATC+AGG 0.394472 2_1:-77278065 None:intergenic
TCTGATTATTACTCTACTCT+TGG 0.396803 2_1:+77276638 Msa0226800:CDS
AGTATTAGAGTTGGAGAAAG+TGG 0.401077 2_1:-77276561 None:intergenic
TATGTTCCACTTGTGGTGGC+AGG 0.411064 2_1:+77280436 Msa0226800:CDS
CCACTCAGTGTCTTCCTCTC+TGG 0.414257 2_1:+77276224 Msa0226800:five_prime_UTR
AATTTCAATTTCAATTTCAA+TGG 0.415244 2_1:+77276400 Msa0226800:exon
TAATCAGGTAAACTATATTC+TGG 0.419047 2_1:-77284874 None:intergenic
GGTGGTGGTGGAAGTGGAAG+TGG 0.419828 2_1:-77276446 None:intergenic
AAAACTAGATTATATTTCAT+AGG 0.422014 2_1:+77285126 Msa0226800:three_prime_UTR
CTTTCGGCCATTTGAACTGC+AGG 0.427687 2_1:-77284177 None:intergenic
TTATCGAAGGTTAGCTCGTC+AGG 0.429324 2_1:+77276700 Msa0226800:CDS
ACGCACGCTTTAATTGTTAG+TGG 0.431451 2_1:-77276319 None:intergenic
TTACAACACTAGCCCTAATC+AGG 0.431492 2_1:-77284889 None:intergenic
AAAGACAATCTCTAGTTCAA+TGG 0.432415 2_1:+77284828 Msa0226800:exon
AATGTCTCAAATAAATCAAA+TGG 0.435939 2_1:-77279547 None:intergenic
AAAACAGTGAGAAAGCGTTT+TGG 0.436675 2_1:-77276605 None:intergenic
AGGAGAAGGAGAAGAATGAA+TGG 0.437247 2_1:-77276531 None:intergenic
CTCTAGTGCAACCTCTTCAA+GGG 0.438786 2_1:-77285103 None:intergenic
ATACTGGAAGGTTGGGTCCT+AGG 0.439597 2_1:-77283956 None:intergenic
ATCTTCTGCAGCCGGAAGTA+AGG 0.441699 2_1:+77284149 Msa0226800:intron
GTGGCAGGGGTCAGGTGATG+AGG 0.444359 2_1:+77280451 Msa0226800:CDS
GTCACTGGAGAGGGTGATGC+TGG 0.445023 2_1:+77281415 Msa0226800:CDS
CGAACAGCTGCTGGCCGAAA+GGG 0.448339 2_1:+77284917 Msa0226800:three_prime_UTR
AGGGCTTTGTATGATCAATA+TGG 0.453668 2_1:+77279216 Msa0226800:CDS
ATCCATCTGGATTTGGCACT+CGG 0.456163 2_1:+77279605 Msa0226800:CDS
TAACTTTAACAGTAAATAAG+TGG 0.462609 2_1:-77283731 None:intergenic
ATTAAAGTTAAAGTTCCTCC+TGG 0.464056 2_1:+77281367 Msa0226800:CDS
CCTGATGTGAACAAGGAACC+TGG 0.464650 2_1:+77278065 Msa0226800:CDS
TGCTGGCTGAACTGGAGTAC+TGG 0.468141 2_1:-77276260 None:intergenic
ATCCCTGCTGGTACCCAACC+TGG 0.472089 2_1:+77283645 Msa0226800:CDS
GTTGAAGGTGGTGGTGGAAG+TGG 0.473132 2_1:-77276452 None:intergenic
GGAAAGTCCTGCAGTTCAAA+TGG 0.473444 2_1:+77284170 Msa0226800:CDS
GAACAACATACTGGAAGGTT+GGG 0.475958 2_1:-77283963 None:intergenic
TTAAACTTGTCAGTTGCCCC+AGG 0.477510 2_1:-77278083 None:intergenic
ATGTTCCACTTGTGGTGGCA+GGG 0.478649 2_1:+77280437 Msa0226800:CDS
CAACCCAAAAGGTGTTTGTT+CGG 0.479856 2_1:-77280475 None:intergenic
GAATGAGTTGAAGGTGGTGG+TGG 0.480222 2_1:-77276458 None:intergenic
GTCCAAATTGTGGAGGTGAC+GGG 0.481641 2_1:+77281281 Msa0226800:CDS
CACAACTTATCTGGTAGTTG+TGG 0.482329 2_1:+77276198 Msa0226800:five_prime_UTR
TATGATCAATATGGCGAGGC+AGG 0.483288 2_1:+77279225 Msa0226800:CDS
GGAAGGTTGGGTCCTAGGAC+GGG 0.483676 2_1:-77283951 None:intergenic
ACTTGCAGGTCTGTAGCAAA+TGG 0.488248 2_1:+77284789 Msa0226800:intron
GACGAGGACATCTCCAGGTT+GGG 0.493540 2_1:-77283658 None:intergenic
AGATATACGTAAAGATCTCC+TGG 0.494601 2_1:-77282776 None:intergenic
AGTGGAACATACTCTCATCT+TGG 0.494603 2_1:-77280424 None:intergenic
TGCCGTAAATGCAGCGGGGA+AGG 0.495126 2_1:+77281322 Msa0226800:CDS
TTAAAGTTAAAGTTCCTCCT+GGG 0.497675 2_1:+77281368 Msa0226800:CDS
AATTTCTATACATACCTCAT+AGG 0.497885 2_1:-77278120 None:intergenic
ACTCATTCATGCTTCTGTGC+CGG 0.498811 2_1:+77276473 Msa0226800:CDS
CTTGAAGAACTTGCTTCTCT+AGG 0.500953 2_1:+77283905 Msa0226800:CDS
TGTCATAACAGGGGTCCTCC+AGG 0.502320 2_1:+77282758 Msa0226800:intron
TGTTCCACTTGTGGTGGCAG+GGG 0.505072 2_1:+77280438 Msa0226800:CDS
AGAACAACATACTGGAAGGT+TGG 0.505747 2_1:-77283964 None:intergenic
AAAGTTGCCGTAAATGCAGC+GGG 0.507133 2_1:+77281317 Msa0226800:CDS
CTGACCCCTGCCACCACAAG+TGG 0.507884 2_1:-77280442 None:intergenic
CAGAAGCATGAATGAGTTGA+AGG 0.508158 2_1:-77276467 None:intergenic
ACTGGTACTGGTGCAAAGTT+AGG 0.508899 2_1:+77280399 Msa0226800:CDS
TTGGAGAAAGTGGAAGGAGA+AGG 0.510873 2_1:-77276551 None:intergenic
GTCATTCAAAATCCCGTCCT+AGG 0.511575 2_1:+77283939 Msa0226800:CDS
CTTGATGTGCTTGAGATACC+AGG 0.514132 2_1:+77282797 Msa0226800:CDS
AAACAGGTAAAGACAGTTGA+AGG 0.514594 2_1:+77283606 Msa0226800:intron
GCAGCGGGGAAGGACGCATA+CGG 0.519290 2_1:+77281332 Msa0226800:CDS
GGCGTTCCCAAATCCGCCAC+TGG 0.520577 2_1:+77276659 Msa0226800:CDS
TGTGATGCCTGTACTGGTAC+TGG 0.520706 2_1:+77280387 Msa0226800:CDS
ACCTGTGAGAACAACCCAAA+AGG 0.520884 2_1:-77280486 None:intergenic
TGTCCAAATTGTGGAGGTGA+CGG 0.521211 2_1:+77281280 Msa0226800:CDS
TGGAAGGTTGGGTCCTAGGA+CGG 0.521812 2_1:-77283952 None:intergenic
ACTTTGCATCTTCAGTTCAA+AGG 0.523338 2_1:+77283871 Msa0226800:intron
CAACAGGTATGATTTCTCCT+TGG 0.524403 2_1:+77280305 Msa0226800:intron
TCTCCAGGTTGGGTACCAGC+AGG 0.526854 2_1:-77283648 None:intergenic
TTAGAGTTGGAGAAAGTGGA+AGG 0.526956 2_1:-77276557 None:intergenic
TTACTAAGGGTGAAGACATC+CGG 0.527254 2_1:+77279641 Msa0226800:CDS
TCGGTACACCCTTCCTTGCA+AGG 0.528930 2_1:-77283680 None:intergenic
GTTTCAGTATGTCCAAATTG+TGG 0.531922 2_1:+77281271 Msa0226800:CDS
ATAAATATAGCATACCCTCT+TGG 0.531985 2_1:-77281439 None:intergenic
TGTCCTCGTCCTTGCAAGGA+AGG 0.532772 2_1:+77283671 Msa0226800:CDS
GTAATGATTCGAACAGCTGC+TGG 0.534114 2_1:+77284908 Msa0226800:three_prime_UTR
CACCCTTCCTTGCAAGGACG+AGG 0.534490 2_1:-77283674 None:intergenic
GGCTTTGATTTCTTTACCAG+TGG 0.535635 2_1:-77276675 None:intergenic
AGAGATTAGTAATGCCTATG+AGG 0.543434 2_1:+77278106 Msa0226800:CDS
ACGAGCTAACCTTCGATAAG+CGG 0.545760 2_1:-77276696 None:intergenic
CAGCGGGGAAGGACGCATAC+GGG 0.546893 2_1:+77281333 Msa0226800:CDS
AAGTGGTCACCACGTATTGA+CGG 0.551433 2_1:-77283714 None:intergenic
CTGAACTGGAGTACTGGTAT+TGG 0.551518 2_1:-77276254 None:intergenic
ACAACTTATCTGGTAGTTGT+GGG 0.557101 2_1:+77276199 Msa0226800:five_prime_UTR
GCAGGAGTTAAGAGTTCAGT+CGG 0.558596 2_1:+77279243 Msa0226800:CDS
GTTAAGAGTTCAGTCGGAGG+AGG 0.559305 2_1:+77279249 Msa0226800:CDS
CGCCGAGTGCCAAATCCAGA+TGG 0.559447 2_1:-77279607 None:intergenic
GGACGAGGACATCTCCAGGT+TGG 0.563044 2_1:-77283659 None:intergenic
GGAACGGAGATTGATTCCTC+CGG 0.564116 2_1:-77276492 None:intergenic
GAAACATGTGATGCCTGTAC+TGG 0.566268 2_1:+77280381 Msa0226800:CDS
AAAGTGGAAGGAGAAGGAGA+AGG 0.568595 2_1:-77276545 None:intergenic
GTTCCTCCTGGGGTTAGCGC+AGG 0.568793 2_1:+77281379 Msa0226800:CDS
TCTAGTGCAACCTCTTCAAG+GGG 0.569818 2_1:-77285102 None:intergenic
TTTGATTTCTTTACCAGTGG+CGG 0.570063 2_1:-77276672 None:intergenic
AAAGGAAATTGTTGTGGGAA+CGG 0.570565 2_1:-77276508 None:intergenic
AAATCAAAGCCGCTTATCGA+AGG 0.571341 2_1:+77276687 Msa0226800:CDS
GAATGGAAAGGAAATTGTTG+TGG 0.573138 2_1:-77276514 None:intergenic
CTGATGTGAACAAGGAACCT+GGG 0.573238 2_1:+77278066 Msa0226800:CDS
TCGAACAGCTGCTGGCCGAA+AGG 0.573766 2_1:+77284916 Msa0226800:three_prime_UTR
TAGCAAATGGAGCTCTAAAG+TGG 0.574327 2_1:+77284802 Msa0226800:CDS
AATGGAAAGGAAATTGTTGT+GGG 0.575082 2_1:-77276513 None:intergenic
AAGGAGAAGAATGAATGGAA+AGG 0.576245 2_1:-77276526 None:intergenic
GCAAGGACGAGGACATCTCC+AGG 0.576440 2_1:-77283663 None:intergenic
GAGATGTCCTCGTCCTTGCA+AGG 0.580447 2_1:+77283667 Msa0226800:CDS
TATACTGGGTTCTGTAGTGA+AGG 0.581924 2_1:+77282877 Msa0226800:CDS
TCCAAATTGTGGAGGTGACG+GGG 0.583688 2_1:+77281282 Msa0226800:CDS
CTTTGCACCAGTACCAGTAC+AGG 0.584881 2_1:-77280394 None:intergenic
AGCTATGCAACAAACGAATG+AGG 0.586265 2_1:-77285267 None:intergenic
AATGTTATGGGATCACCTCA+TGG 0.588681 2_1:-77285306 None:intergenic
GCCAAATCCAGATGGATCCA+TGG 0.590096 2_1:-77279599 None:intergenic
GTCCTCGTCCTTGCAAGGAA+GGG 0.591231 2_1:+77283672 Msa0226800:CDS
CATGAATGAGTTGAAGGTGG+TGG 0.599184 2_1:-77276461 None:intergenic
CACAACTACCAGATAAGTTG+TGG 0.600704 2_1:-77276197 None:intergenic
CTCCAGGTTGGGTACCAGCA+GGG 0.602728 2_1:-77283647 None:intergenic
CATTCATGCTTCTGTGCCGG+AGG 0.603284 2_1:+77276476 Msa0226800:CDS
CGTCGTAGTACTGTTACTAA+GGG 0.604949 2_1:+77279628 Msa0226800:CDS
ATACTGCCTGCGCTAACCCC+AGG 0.606475 2_1:-77281385 None:intergenic
TCTGAACTACAAATCCCTGC+TGG 0.611504 2_1:+77283633 Msa0226800:CDS
GAACAGCTGCTGGCCGAAAG+GGG 0.616718 2_1:+77284918 Msa0226800:three_prime_UTR
TAAAGTTAAAGTTCCTCCTG+GGG 0.618796 2_1:+77281369 Msa0226800:CDS
AAGCATATTGAATACCGCAT+AGG 0.621041 2_1:-77279280 None:intergenic
GTATCATCCTGATGTGAACA+AGG 0.622969 2_1:+77278058 Msa0226800:intron
GAGGGTGATGCTGGACCAAG+AGG 0.629360 2_1:+77281424 Msa0226800:CDS
CTTCAGTTCAAAGGAGCGTG+AGG 0.643651 2_1:+77283880 Msa0226800:intron
TCAGTATGTCCAAATTGTGG+AGG 0.645215 2_1:+77281274 Msa0226800:CDS
AATTGCCTCAGAAAACTCCA+AGG 0.646456 2_1:-77280322 None:intergenic
AGTTCAATGGAATTATTAGG+TGG 0.649164 2_1:+77284841 Msa0226800:exon
CAGAGAGGAAGACACTGAGT+GGG 0.649201 2_1:-77276223 None:intergenic
GAAAGTTGCCGTAAATGCAG+CGG 0.650404 2_1:+77281316 Msa0226800:CDS
AGTTATCTAGAAGCTATACT+GGG 0.650891 2_1:+77282863 Msa0226800:CDS
AACTGATTGATATTGTCGAG+CGG 0.658179 2_1:-77282844 None:intergenic
GGAGTTAAGAGTTCAGTCGG+AGG 0.664891 2_1:+77279246 Msa0226800:CDS
AGAGTATGTTCCACTTGTGG+TGG 0.666541 2_1:+77280432 Msa0226800:CDS
TGATGTGAACAAGGAACCTG+GGG 0.673343 2_1:+77278067 Msa0226800:CDS
TAGTGCAACCTCTTCAAGGG+GGG 0.673533 2_1:-77285100 None:intergenic
CCAGAGAGGAAGACACTGAG+TGG 0.676661 2_1:-77276224 None:intergenic
ATGAGAGTATGTTCCACTTG+TGG 0.676889 2_1:+77280429 Msa0226800:CDS
TTTGTATGATCAATATGGCG+AGG 0.678449 2_1:+77279221 Msa0226800:CDS
CTGCCTGCGCTAACCCCAGG+AGG 0.685288 2_1:-77281382 None:intergenic
AGGGTGATGCTGGACCAAGA+GGG 0.687007 2_1:+77281425 Msa0226800:CDS
CTAGTGCAACCTCTTCAAGG+GGG 0.687095 2_1:-77285101 None:intergenic
AGGAGGATCAAGTGCCTATG+CGG 0.690520 2_1:+77279266 Msa0226800:CDS
TTAAACAGACCGTCAATACG+TGG 0.692147 2_1:+77283705 Msa0226800:CDS
AAGCATGAATGAGTTGAAGG+TGG 0.731165 2_1:-77276464 None:intergenic
GTATTGGTACATTACCAGAG+AGG 0.770119 2_1:-77276238 None:intergenic
TATACGTAAAGATCTCCTGG+AGG 0.770752 2_1:-77282773 None:intergenic
AAGTTGCCGTAAATGCAGCG+GGG 0.833562 2_1:+77281318 Msa0226800:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTATAAAAATAAAAATAAA+AGG - chr2_1:77284309-77284328 None:intergenic 0.0%
!!! ATTTTATTTTCTTTCAATTA+AGG - chr2_1:77277410-77277429 None:intergenic 10.0%
!! TAATACTCATATAATAAATA+GGG - chr2_1:77279980-77279999 None:intergenic 10.0%
!! TTAATACTCATATAATAAAT+AGG - chr2_1:77279981-77280000 None:intergenic 10.0%
!! AGAAAGTAAAAATATAAAAA+GGG + chr2_1:77280782-77280801 Msa0226800:intron 10.0%
!! AAATAAAAGGAAAATTATAA+CGG - chr2_1:77281017-77281036 None:intergenic 10.0%
!! ATATATTAGAAGAATAATTT+AGG - chr2_1:77282173-77282192 None:intergenic 10.0%
!!! AAAAAATCATTTCTTTTAAT+TGG - chr2_1:77282196-77282215 None:intergenic 10.0%
!!! TCTTTTAACTTTTTTTTTTT+TGG + chr2_1:77283519-77283538 Msa0226800:intron 10.0%
!!! CTTTTAACTTTTTTTTTTTT+GGG + chr2_1:77283520-77283539 Msa0226800:intron 10.0%
!! AATTTCAATTTCAATTTCAA+TGG + chr2_1:77276382-77276401 Msa0226800:five_prime_UTR 15.0%
!!! AAAACTGATTTTAATTTGTT+TGG + chr2_1:77277763-77277782 Msa0226800:intron 15.0%
!!! ATTTATTTGAGACATTTTTT+GGG + chr2_1:77279554-77279573 Msa0226800:CDS 15.0%
!! AAATATAATAATCATTTCCT+TGG - chr2_1:77279714-77279733 None:intergenic 15.0%
!! AATACTCATATAATAAATAG+GGG - chr2_1:77279979-77279998 None:intergenic 15.0%
!! TATTATATGAGTATTAATCT+AGG + chr2_1:77279984-77280003 Msa0226800:intron 15.0%
!!! CTTTTTATATTTTTACTTTC+TGG - chr2_1:77280783-77280802 None:intergenic 15.0%
!! CAGAAAGTAAAAATATAAAA+AGG + chr2_1:77280781-77280800 Msa0226800:intron 15.0%
!! AATAAAAGGAAAATTATAAC+GGG - chr2_1:77281016-77281035 None:intergenic 15.0%
!! TTCTATTAGCTATTTATATA+TGG - chr2_1:77282121-77282140 None:intergenic 15.0%
!! TAGATTAATATCTAAATAAC+CGG - chr2_1:77283125-77283144 None:intergenic 15.0%
!! ACATGTTTATAAAAGAAAAA+TGG - chr2_1:77283348-77283367 None:intergenic 15.0%
!!! TTTTCTTTTATAAACATGTT+TGG + chr2_1:77283349-77283368 Msa0226800:intron 15.0%
!!! TTACAACTTTTTTTGATATT+TGG + chr2_1:77283441-77283460 Msa0226800:intron 15.0%
!!! TACAACTTTTTTTGATATTT+GGG + chr2_1:77283442-77283461 Msa0226800:intron 15.0%
!! AACTAAATATCATATGTTAT+AGG - chr2_1:77284042-77284061 None:intergenic 15.0%
!! ATAAAATGACAATAAATGAA+AGG - chr2_1:77284643-77284662 None:intergenic 15.0%
!!! TTCATTTATTGTCATTTTAT+AGG + chr2_1:77284643-77284662 Msa0226800:intron 15.0%
!! AAAACTAGATTATATTTCAT+AGG + chr2_1:77285126-77285145 Msa0226800:three_prime_UTR 15.0%
!! TAAATATGTTAAAAAAGGGT+CGG - chr2_1:77276299-77276318 None:intergenic 20.0%
!! GTGGTAAATATGTTAAAAAA+GGG - chr2_1:77276303-77276322 None:intergenic 20.0%
!! AGTGGTAAATATGTTAAAAA+AGG - chr2_1:77276304-77276323 None:intergenic 20.0%
!! AACATTAGGATTTATTAGTT+TGG + chr2_1:77276763-77276782 Msa0226800:intron 20.0%
!! GTGTATAATTGATTATAGAT+GGG + chr2_1:77276847-77276866 Msa0226800:intron 20.0%
!! TATAAATAAGCTCAAATATG+TGG - chr2_1:77276906-77276925 None:intergenic 20.0%
!! TGCTAAAAATAATGAATTTG+CGG + chr2_1:77276964-77276983 Msa0226800:intron 20.0%
!!! TTTTTTAAAATTAAGACTGC+AGG + chr2_1:77277064-77277083 Msa0226800:intron 20.0%
!!! TTTTTAAAATTAAGACTGCA+GGG + chr2_1:77277065-77277084 Msa0226800:intron 20.0%
!! AAATTACGTTAAGAGTTAAA+AGG - chr2_1:77277829-77277848 None:intergenic 20.0%
!!! TTGTGTTAAGTTTTCTTTAT+TGG + chr2_1:77278166-77278185 Msa0226800:intron 20.0%
!! AAAAAATAAATCATCAGATC+AGG - chr2_1:77278369-77278388 None:intergenic 20.0%
!! TTCGATTTAAACAAAGAAAA+CGG + chr2_1:77278545-77278564 Msa0226800:intron 20.0%
!!! TGGTACTTTTTATTCTTAAT+TGG + chr2_1:77279046-77279065 Msa0226800:intron 20.0%
!! TTTATTCTTAATTGGATTGA+TGG + chr2_1:77279054-77279073 Msa0226800:intron 20.0%
!! AATGTCTCAAATAAATCAAA+TGG - chr2_1:77279550-77279569 None:intergenic 20.0%
!!! GATTTATTTGAGACATTTTT+TGG + chr2_1:77279553-77279572 Msa0226800:CDS 20.0%
!!! CAACAAATCAATTTAGAATA+AGG - chr2_1:77279766-77279785 None:intergenic 20.0%
!!! CTTTTCTAAATATTAGCTTA+TGG + chr2_1:77280174-77280193 Msa0226800:intron 20.0%
!! AAATAAACTCAATGATTCAA+TGG - chr2_1:77280823-77280842 None:intergenic 20.0%
!! ATAAAAGGAAAATTATAACG+GGG - chr2_1:77281015-77281034 None:intergenic 20.0%
!! CAACAATTCATGAAAATAAA+AGG - chr2_1:77281030-77281049 None:intergenic 20.0%
!! TTAATTATTGTGAAAGTCTT+AGG + chr2_1:77281475-77281494 Msa0226800:intron 20.0%
!! TATAACTTCTATCCAATAAT+TGG - chr2_1:77281501-77281520 None:intergenic 20.0%
!!! AAGAAATACTTCTAAAAGAA+AGG + chr2_1:77281617-77281636 Msa0226800:intron 20.0%
!!! AATTCTAAGAGTTTACATTA+AGG - chr2_1:77281683-77281702 None:intergenic 20.0%
!!! TTAGAAGAATAATTTAGGTT+GGG - chr2_1:77282168-77282187 None:intergenic 20.0%
!! ATTAGAAGAATAATTTAGGT+TGG - chr2_1:77282169-77282188 None:intergenic 20.0%
!! AACATTGTTAAATATCTTGA+GGG + chr2_1:77282328-77282347 Msa0226800:intron 20.0%
!!! TAGTACTTTTATTTTCATGA+AGG + chr2_1:77282976-77282995 Msa0226800:intron 20.0%
!!! TTTTCATGAAGGTTTTATTT+TGG + chr2_1:77282987-77283006 Msa0226800:intron 20.0%
!! TAATCTAATCTCTTGATATT+TGG + chr2_1:77283138-77283157 Msa0226800:intron 20.0%
!! AATCTAATCTCTTGATATTT+GGG + chr2_1:77283139-77283158 Msa0226800:intron 20.0%
!! TAACTTTAACAGTAAATAAG+TGG - chr2_1:77283734-77283753 None:intergenic 20.0%
!! TTGACAAAAAAGTAATATAC+AGG - chr2_1:77283823-77283842 None:intergenic 20.0%
!!! ATCAGTTTTGAAACTAAATA+AGG + chr2_1:77284421-77284440 Msa0226800:intron 20.0%
!!! TCAGTTTTGAAACTAAATAA+GGG + chr2_1:77284422-77284441 Msa0226800:intron 20.0%
!! ACAAAAAATCAGATCTTATT+GGG - chr2_1:77284513-77284532 None:intergenic 20.0%
!! TACAAAAAATCAGATCTTAT+TGG - chr2_1:77284514-77284533 None:intergenic 20.0%
!!! TATTGTCATTTTATAGGATA+AGG + chr2_1:77284649-77284668 Msa0226800:intron 20.0%
!!! AACTTTTAACCTAATAGTAT+AGG - chr2_1:77284700-77284719 None:intergenic 20.0%
!!! TATTCTTTTATTTGTTACAC+TGG + chr2_1:77285023-77285042 Msa0226800:three_prime_UTR 20.0%
!!! TAACTTGTTGAAGAATATTT+TGG + chr2_1:77285077-77285096 Msa0226800:three_prime_UTR 20.0%
! AGAGAATTTAGTATTAGAGT+TGG - chr2_1:77276573-77276592 None:intergenic 25.0%
! AGAATGGAAAATAGAATGAT+AGG - chr2_1:77276729-77276748 None:intergenic 25.0%
! TTGACAAGAAAAGAAAAGAA+TGG - chr2_1:77276745-77276764 None:intergenic 25.0%
!! TTTCTTTTCTTGTCAACATT+AGG + chr2_1:77276749-77276768 Msa0226800:intron 25.0%
!! TGTATGTTTCGTTTCAATTT+TGG + chr2_1:77276801-77276820 Msa0226800:intron 25.0%
! GGTGTATAATTGATTATAGA+TGG + chr2_1:77276846-77276865 Msa0226800:intron 25.0%
!!! TTTTAAAATTAAGACTGCAG+GGG + chr2_1:77277066-77277085 Msa0226800:intron 25.0%
! CTTATTATATAAGCTTGTAG+TGG - chr2_1:77277162-77277181 None:intergenic 25.0%
!! TTTTAGTCAAATGAGCTTAT+AGG + chr2_1:77277223-77277242 Msa0226800:intron 25.0%
! CATATTGAATTTGTAGTGTT+TGG - chr2_1:77277496-77277515 None:intergenic 25.0%
! TTGAACGTTAAAATCTTGTT+TGG - chr2_1:77277665-77277684 None:intergenic 25.0%
! GTTTGGATATATTCAAACAA+AGG - chr2_1:77277705-77277724 None:intergenic 25.0%
!! AAACATAACTGGTTTATGTT+TGG - chr2_1:77277722-77277741 None:intergenic 25.0%
! TGGATACATTCATATAAAAG+GGG - chr2_1:77277877-77277896 None:intergenic 25.0%
! CTGGATACATTCATATAAAA+GGG - chr2_1:77277878-77277897 None:intergenic 25.0%
! TCTGGATACATTCATATAAA+AGG - chr2_1:77277879-77277898 None:intergenic 25.0%
! AATGTAAAATGGTTTATGTC+TGG - chr2_1:77277897-77277916 None:intergenic 25.0%
! AAAGTTAGTCGAATGTAAAA+TGG - chr2_1:77277908-77277927 None:intergenic 25.0%
! AATTTCTATACATACCTCAT+AGG - chr2_1:77278123-77278142 None:intergenic 25.0%
!! TAAGTTTTCTTTATTGGAAG+TGG + chr2_1:77278172-77278191 Msa0226800:intron 25.0%
! ACTGAAGAAGAAAAGAAAAA+CGG - chr2_1:77278283-77278302 None:intergenic 25.0%
! AAATTACATTAGAGACACAT+AGG + chr2_1:77278312-77278331 Msa0226800:intron 25.0%
! CATTCATTTGACGTTTAAAT+GGG + chr2_1:77278342-77278361 Msa0226800:intron 25.0%
! AACTTCATAAGAAAGTTCTA+TGG + chr2_1:77279026-77279045 Msa0226800:intron 25.0%
! ACAATTATACTACTACAAGA+CGG - chr2_1:77279121-77279140 None:intergenic 25.0%
!!! TCAATTTTTTCCCATAAAGA+AGG - chr2_1:77279422-77279441 None:intergenic 25.0%
! TAATAAATAGGGGTCTAAAT+TGG - chr2_1:77279969-77279988 None:intergenic 25.0%
!!! CTTTTGATTCAAATATCAAC+AGG + chr2_1:77280289-77280308 Msa0226800:intron 25.0%
!!! AGTTGTTTTTTTGTTGAGTT+CGG + chr2_1:77280515-77280534 Msa0226800:intron 25.0%
!! TTTGTAATTGATTTCTACTG+TGG + chr2_1:77280665-77280684 Msa0226800:intron 25.0%
!!! TTATATTTTTACTTTCTGGC+TGG - chr2_1:77280779-77280798 None:intergenic 25.0%
! AATATTGGTATTACAGAGAA+CGG - chr2_1:77280853-77280872 None:intergenic 25.0%
!!! CAATGTTTTTATCTTATGTG+AGG - chr2_1:77281202-77281221 None:intergenic 25.0%
!!! AAAACATTGTACTTTTTCTC+TGG + chr2_1:77281213-77281232 Msa0226800:intron 25.0%
! TAAGAAAACTTACTAACTCA+TGG - chr2_1:77281583-77281602 None:intergenic 25.0%
!! AATACTTCTAAAAGAAAGGA+AGG + chr2_1:77281621-77281640 Msa0226800:intron 25.0%
! GGATATTACAAAGTAAAAGA+AGG + chr2_1:77281642-77281661 Msa0226800:intron 25.0%
! TTCATTATTAGAATGCTCTT+TGG - chr2_1:77281925-77281944 None:intergenic 25.0%
! TAGCTATTTATATATGGAGT+AGG - chr2_1:77282115-77282134 None:intergenic 25.0%
! CAACATTGTTAAATATCTTG+AGG + chr2_1:77282327-77282346 Msa0226800:intron 25.0%
!!! TCATTTTATTTTGTGTGAAC+CGG - chr2_1:77282425-77282444 None:intergenic 25.0%
! AAGTTTGAATATATCCTCTT+TGG + chr2_1:77282480-77282499 Msa0226800:intron 25.0%
!!! CTACCTTGAGAATTTTAAAA+AGG + chr2_1:77282538-77282557 Msa0226800:intron 25.0%
!!! TGACCTTTTTAAAATTCTCA+AGG - chr2_1:77282544-77282563 None:intergenic 25.0%
!!! GTTGTTTGTTGTTATTGAAA+TGG + chr2_1:77282665-77282684 Msa0226800:intron 25.0%
! CATGTAATTGATCAATGATA+TGG - chr2_1:77282713-77282732 None:intergenic 25.0%
!! TTGATCTTTTTGTCATAACA+GGG + chr2_1:77282748-77282767 Msa0226800:intron 25.0%
!!! GTTTTTTTGCTTCTTTTTGT+AGG + chr2_1:77282938-77282957 Msa0226800:intron 25.0%
! AGAATCTGAATAGAACATTA+GGG - chr2_1:77283086-77283105 None:intergenic 25.0%
! TAGAATCTGAATAGAACATT+AGG - chr2_1:77283087-77283106 None:intergenic 25.0%
! TCTAATTCCTTGATATATTC+CGG + chr2_1:77283103-77283122 Msa0226800:intron 25.0%
! TAAATAACCGGAATATATCA+AGG - chr2_1:77283113-77283132 None:intergenic 25.0%
! TTACAATACCAAAACGTATT+AGG + chr2_1:77283751-77283770 Msa0226800:CDS 25.0%
! CAAAAAAGTAATATACAGGA+GGG - chr2_1:77283819-77283838 None:intergenic 25.0%
! ACAAAAAAGTAATATACAGG+AGG - chr2_1:77283820-77283839 None:intergenic 25.0%
!! TTAGTTCTTCTAAACATACT+TGG + chr2_1:77284060-77284079 Msa0226800:intron 25.0%
! ATGGAATAAACTAAAAAACG+TGG + chr2_1:77284254-77284273 Msa0226800:CDS 25.0%
!!! CAGTTTTGAAACTAAATAAG+GGG + chr2_1:77284423-77284442 Msa0226800:intron 25.0%
!!! AGTTTTGAAACTAAATAAGG+GGG + chr2_1:77284424-77284443 Msa0226800:intron 25.0%
! ATATAGCAATTGAGTACATA+AGG - chr2_1:77284489-77284508 None:intergenic 25.0%
! TAATCACCAACAAAAAATCT+CGG - chr2_1:77284573-77284592 None:intergenic 25.0%
! ACTAAAACAAACGAAAAAAG+TGG - chr2_1:77284677-77284696 None:intergenic 25.0%
!!! TGTTTTAGTCCTATACTATT+AGG + chr2_1:77284688-77284707 Msa0226800:intron 25.0%
!! TCTAGTTCAATGGAATTATT+AGG + chr2_1:77284838-77284857 Msa0226800:exon 25.0%
! TAATCAGGTAAACTATATTC+TGG - chr2_1:77284877-77284896 None:intergenic 25.0%
! AGAATATAGTTTACCTGATT+AGG + chr2_1:77284876-77284895 Msa0226800:three_prime_UTR 25.0%
! GAATATAGTTTACCTGATTA+GGG + chr2_1:77284877-77284896 Msa0226800:three_prime_UTR 25.0%
!! TTTGTTACACTGGTAAATTT+TGG + chr2_1:77285033-77285052 Msa0226800:three_prime_UTR 25.0%
!!! TTTTAAGTGATTCACTGAAA+TGG - chr2_1:77285163-77285182 None:intergenic 25.0%
! TTAAACTTCACTTATGCATA+AGG - chr2_1:77285207-77285226 None:intergenic 25.0%
! AAAAAAGGGTCGGATTTTAT+GGG - chr2_1:77276289-77276308 None:intergenic 30.0%
! TAAAAAAGGGTCGGATTTTA+TGG - chr2_1:77276290-77276309 None:intergenic 30.0%
AATGGAAAGGAAATTGTTGT+GGG - chr2_1:77276516-77276535 None:intergenic 30.0%
TCTGATTATTACTCTACTCT+TGG + chr2_1:77276638-77276657 Msa0226800:CDS 30.0%
! TGTTTCGTTTCAATTTTGGA+TGG + chr2_1:77276805-77276824 Msa0226800:intron 30.0%
! GTTTCGTTTCAATTTTGGAT+GGG + chr2_1:77276806-77276825 Msa0226800:intron 30.0%
! TTTCGTTTCAATTTTGGATG+GGG + chr2_1:77276807-77276826 Msa0226800:intron 30.0%
! TAGATGGGTAGAATTGATTT+AGG + chr2_1:77276862-77276881 Msa0226800:intron 30.0%
! AGATGGGTAGAATTGATTTA+GGG + chr2_1:77276863-77276882 Msa0226800:intron 30.0%
CTTACAAGCTCATTTGATTA+AGG + chr2_1:77276934-77276953 Msa0226800:intron 30.0%
AATAATGAATTTGCGGTGTT+TGG + chr2_1:77276971-77276990 Msa0226800:intron 30.0%
AAGCTAATTCAAGTAGCTTA+TGG - chr2_1:77277350-77277369 None:intergenic 30.0%
CTCATTTGACTAAAAAAGAC+CGG - chr2_1:77277218-77277237 None:intergenic 30.0%
TTAAGCTTGTGAAACCAAAT+GGG - chr2_1:77277296-77277315 None:intergenic 30.0%
TTTAAGCTTGTGAAACCAAA+TGG - chr2_1:77277297-77277316 None:intergenic 30.0%
AAATGTGGAACAAACATAAC+TGG - chr2_1:77277733-77277752 None:intergenic 30.0%
AGTTATGTTTGTTCCACATT+TGG + chr2_1:77277732-77277751 Msa0226800:intron 30.0%
GCATTGAAATCGTGTTTATT+TGG - chr2_1:77277990-77278009 None:intergenic 30.0%
TCAATGCAAACAATCTTACT+TGG + chr2_1:77278003-77278022 Msa0226800:intron 30.0%
CAATAACAATGAACAATGAG+TGG - chr2_1:77278149-77278168 None:intergenic 30.0%
AAGAAAAACGGTAACAAGTT+AGG - chr2_1:77278271-77278290 None:intergenic 30.0%
! TCTTTTCTTCTTCAGTATTG+TGG + chr2_1:77278287-77278306 Msa0226800:intron 30.0%
CCATTTAAACGTCAAATGAA+TGG - chr2_1:77278344-77278363 None:intergenic 30.0%
CCATTCATTTGACGTTTAAA+TGG + chr2_1:77278341-77278360 Msa0226800:intron 30.0%
!!! TCTTTTTTTTTCCAATTCCG+AGG + chr2_1:77278394-77278413 Msa0226800:intron 30.0%
GCAACAAAACACAACATAAT+GGG - chr2_1:77278453-77278472 None:intergenic 30.0%
TGCAACAAAACACAACATAA+TGG - chr2_1:77278454-77278473 None:intergenic 30.0%
GAAATATTTGACCAAGTCAA+AGG + chr2_1:77278510-77278529 Msa0226800:intron 30.0%
GAGAAAGAAAAACAGAGAAA+CGG - chr2_1:77278627-77278646 None:intergenic 30.0%
! AGGATTCTAGAAGAATAAGA+GGG + chr2_1:77278843-77278862 Msa0226800:intron 30.0%
AAGTTGAGTCCTTTATAACA+TGG - chr2_1:77279011-77279030 None:intergenic 30.0%
!! CTTAAGCTCTTGTTTCATTT+TGG + chr2_1:77279083-77279102 Msa0226800:intron 30.0%
TTCTGAATTATAACACTGTC+AGG + chr2_1:77279173-77279192 Msa0226800:intron 30.0%
! ATGATAAAAACTTGCTTGTC+AGG + chr2_1:77279353-77279372 Msa0226800:intron 30.0%
GAGTAAAAGACAACTTCAAT+TGG - chr2_1:77279453-77279472 None:intergenic 30.0%
CTTACATAAGCAGCAAAAAT+GGG - chr2_1:77279482-77279501 None:intergenic 30.0%
!!! ACATTTTTTGGGCCAAATAT+GGG + chr2_1:77279565-77279584 Msa0226800:CDS 30.0%
AATCATTTCCTTGGCAAATA+TGG - chr2_1:77279705-77279724 None:intergenic 30.0%
CTGATTAAAAAAAGTTCCCT+AGG - chr2_1:77279914-77279933 None:intergenic 30.0%
CAAAATCTAATGCTTTGGTT+GGG + chr2_1:77280046-77280065 Msa0226800:intron 30.0%
AAAGTTATATGCGGAAGAAT+AGG - chr2_1:77280129-77280148 None:intergenic 30.0%
ATCCCATGATAAATACTTGT+TGG + chr2_1:77280913-77280932 Msa0226800:intron 30.0%
TCCCATGATAAATACTTGTT+GGG + chr2_1:77280914-77280933 Msa0226800:intron 30.0%
TCCCAACAAGTATTTATCAT+GGG - chr2_1:77280918-77280937 None:intergenic 30.0%
ATCCCAACAAGTATTTATCA+TGG - chr2_1:77280919-77280938 None:intergenic 30.0%
TACACAACAGAGTTTGTAAT+TGG + chr2_1:77280945-77280964 Msa0226800:intron 30.0%
TGTGCAGAATGTAACTTAAT+TGG - chr2_1:77280992-77281011 None:intergenic 30.0%
GCTAATCTCTATTCAATGTT+AGG + chr2_1:77281249-77281268 Msa0226800:intron 30.0%
ATTAAAGTTAAAGTTCCTCC+TGG + chr2_1:77281367-77281386 Msa0226800:CDS 30.0%
TTAAAGTTAAAGTTCCTCCT+GGG + chr2_1:77281368-77281387 Msa0226800:CDS 30.0%
ATAAATATAGCATACCCTCT+TGG - chr2_1:77281442-77281461 None:intergenic 30.0%
CTAACTCATGGAAACATATA+CGG - chr2_1:77281571-77281590 None:intergenic 30.0%
! CCTTAGAAGTTAATTTGGTA+GGG - chr2_1:77281727-77281746 None:intergenic 30.0%
! ACCTTAGAAGTTAATTTGGT+AGG - chr2_1:77281728-77281747 None:intergenic 30.0%
!! CAAATTAACTTCTAAGGTGA+GGG + chr2_1:77281730-77281749 Msa0226800:intron 30.0%
! ATCTAAAGCGCGAATTAATA+TGG + chr2_1:77281839-77281858 Msa0226800:intron 30.0%
! TCTAAAGCGCGAATTAATAT+GGG + chr2_1:77281840-77281859 Msa0226800:intron 30.0%
ATTGTTAAATATCTTGAGGG+AGG + chr2_1:77282331-77282350 Msa0226800:intron 30.0%
TTGTTAAATATCTTGAGGGA+GGG + chr2_1:77282332-77282351 Msa0226800:intron 30.0%
!!! CATTTTATTTTGTGTGAACC+GGG - chr2_1:77282424-77282443 None:intergenic 30.0%
! GTTGATCTTTTTGTCATAAC+AGG + chr2_1:77282747-77282766 Msa0226800:intron 30.0%
! TGATCTTTTTGTCATAACAG+GGG + chr2_1:77282749-77282768 Msa0226800:intron 30.0%
ATATCATCTCTTTGAATTCC+TGG - chr2_1:77282818-77282837 None:intergenic 30.0%
AGTTATCTAGAAGCTATACT+GGG + chr2_1:77282863-77282882 Msa0226800:CDS 30.0%
TATTATTCATGCTTGAAGCT+TGG + chr2_1:77282916-77282935 Msa0226800:intron 30.0%
!! TGATATTTGGGATTTTACTG+CGG + chr2_1:77283151-77283170 Msa0226800:intron 30.0%
AATCTGACGCTATATTATGT+TGG + chr2_1:77283174-77283193 Msa0226800:intron 30.0%
ACAATCTCGAAGTATGAAAA+AGG - chr2_1:77283375-77283394 None:intergenic 30.0%
! AATCAACAGCTAACATTTTC+CGG + chr2_1:77283578-77283597 Msa0226800:intron 30.0%
! ATTGACGGTCTGTTTAATTT+CGG - chr2_1:77283702-77283721 None:intergenic 30.0%
! ACTCATTACCTAATACGTTT+TGG - chr2_1:77283762-77283781 None:intergenic 30.0%
AATTCAACTATAGTCTACTG+TGG - chr2_1:77284113-77284132 None:intergenic 30.0%
AATAAACTAAAAAACGTGGC+TGG + chr2_1:77284258-77284277 Msa0226800:CDS 30.0%
ATAAACTAAAAAACGTGGCT+GGG + chr2_1:77284259-77284278 Msa0226800:CDS 30.0%
! CGCAATCAGTTTTCATTAAT+TGG + chr2_1:77284336-77284355 Msa0226800:intron 30.0%
CAATTGAGTACATAAGGAAA+AGG - chr2_1:77284483-77284502 None:intergenic 30.0%
AATCACCAACAAAAAATCTC+GGG - chr2_1:77284572-77284591 None:intergenic 30.0%
!! TTGGTGATTATTTTCATTGC+TGG + chr2_1:77284583-77284602 Msa0226800:intron 30.0%
GATGCACAAAATAATTACCA+AGG - chr2_1:77284738-77284757 None:intergenic 30.0%
! AAAGACAATCTCTAGTTCAA+TGG + chr2_1:77284828-77284847 Msa0226800:exon 30.0%
AGTTCAATGGAATTATTAGG+TGG + chr2_1:77284841-77284860 Msa0226800:exon 30.0%
ACAACTTATCTGGTAGTTGT+GGG + chr2_1:77276199-77276218 Msa0226800:five_prime_UTR 35.0%
AAAGGAAATTGTTGTGGGAA+CGG - chr2_1:77276511-77276530 None:intergenic 35.0%
GAATGGAAAGGAAATTGTTG+TGG - chr2_1:77276517-77276536 None:intergenic 35.0%
AAGGAGAAGAATGAATGGAA+AGG - chr2_1:77276529-77276548 None:intergenic 35.0%
AGTATTAGAGTTGGAGAAAG+TGG - chr2_1:77276564-77276583 None:intergenic 35.0%
!!! AAAACAGTGAGAAAGCGTTT+TGG - chr2_1:77276608-77276627 None:intergenic 35.0%
! TTTGATTTCTTTACCAGTGG+CGG - chr2_1:77276675-77276694 None:intergenic 35.0%
! TTCGTTTCAATTTTGGATGG+GGG + chr2_1:77276808-77276827 Msa0226800:intron 35.0%
TGGGGGAAAATTGATCATAT+AGG + chr2_1:77276825-77276844 Msa0226800:intron 35.0%
! GAATTGATTTAGGGTCTGTT+TGG + chr2_1:77276872-77276891 Msa0226800:intron 35.0%
!! AAAAAAGACCGGTTTGGTAA+TGG - chr2_1:77277207-77277226 None:intergenic 35.0%
TTGACTAAAAAAGACCGGTT+TGG - chr2_1:77277213-77277232 None:intergenic 35.0%
!!! TTTTTAGGGTCTGTTTGGTA+AGG - chr2_1:77277268-77277287 None:intergenic 35.0%
TAAGCTTGTGAAACCAAATG+GGG - chr2_1:77277295-77277314 None:intergenic 35.0%
GTAGTGTTTGGTAAAACTAG+CGG - chr2_1:77277484-77277503 None:intergenic 35.0%
! GTTGATTCTAACTTGAAGCT+AGG + chr2_1:77277622-77277641 Msa0226800:intron 35.0%
AGAGATTAGTAATGCCTATG+AGG + chr2_1:77278106-77278125 Msa0226800:CDS 35.0%
!!! ATCAGCTGAGTTTTTGACTT+AGG + chr2_1:77278236-77278255 Msa0226800:intron 35.0%
!!! TCAGCTGAGTTTTTGACTTA+GGG + chr2_1:77278237-77278256 Msa0226800:intron 35.0%
ATGTAAGAAAACCTCGGAAT+TGG - chr2_1:77278408-77278427 None:intergenic 35.0%
CTAGGGTTTAGACTGATTAT+TGG + chr2_1:77278708-77278727 Msa0226800:intron 35.0%
TGGTATTTATAGCCTGCTAT+GGG + chr2_1:77278755-77278774 Msa0226800:intron 35.0%
!! AGGGGTATTTGTGTATTTCT+AGG + chr2_1:77278810-77278829 Msa0226800:intron 35.0%
!! GGTATTTGTGTATTTCTAGG+CGG + chr2_1:77278813-77278832 Msa0226800:intron 35.0%
! GAGGATTCTAGAAGAATAAG+AGG + chr2_1:77278842-77278861 Msa0226800:intron 35.0%
! ATTCTAGAAGAATAAGAGGG+CGG + chr2_1:77278846-77278865 Msa0226800:intron 35.0%
! AGCCTCTAGGAATATTATGA+CGG + chr2_1:77278979-77278998 Msa0226800:intron 35.0%
GAGTCCTTTATAACATGGTA+TGG - chr2_1:77279006-77279025 None:intergenic 35.0%
TGCTATCAGATGACAAAAAG+AGG + chr2_1:77279196-77279215 Msa0226800:CDS 35.0%
GCTATCAGATGACAAAAAGA+GGG + chr2_1:77279197-77279216 Msa0226800:CDS 35.0%
! AGGGCTTTGTATGATCAATA+TGG + chr2_1:77279216-77279235 Msa0226800:CDS 35.0%
TTTGTATGATCAATATGGCG+AGG + chr2_1:77279221-77279240 Msa0226800:CDS 35.0%
AAGCATATTGAATACCGCAT+AGG - chr2_1:77279283-77279302 None:intergenic 35.0%
CCTTACATAAGCAGCAAAAA+TGG - chr2_1:77279483-77279502 None:intergenic 35.0%
!! CCATTTTTGCTGCTTATGTA+AGG + chr2_1:77279480-77279499 Msa0226800:intron 35.0%
!!! GACATTTTTTGGGCCAAATA+TGG + chr2_1:77279564-77279583 Msa0226800:CDS 35.0%
TTATCCACATCATAACTCAC+CGG - chr2_1:77279663-77279682 None:intergenic 35.0%
GAATTTCGATAGATCCCAAT+GGG + chr2_1:77279800-77279819 Msa0226800:intron 35.0%
ACTAGGAGAGATTAGATACA+TGG - chr2_1:77279837-77279856 None:intergenic 35.0%
TCTCCTAGTTGAATAAAGCT+TGG + chr2_1:77279848-77279867 Msa0226800:intron 35.0%
!! TGACCAAGCTTTATTCAACT+AGG - chr2_1:77279854-77279873 None:intergenic 35.0%
AAGGAGTAAAGGAAAACCTA+GGG + chr2_1:77279895-77279914 Msa0226800:intron 35.0%
!!! AAGCATTAGATTTTGGAGCA+AGG - chr2_1:77280041-77280060 None:intergenic 35.0%
TGCTCCAAAATCTAATGCTT+TGG + chr2_1:77280041-77280060 Msa0226800:intron 35.0%
!! CCAACCAAAGCATTAGATTT+TGG - chr2_1:77280048-77280067 None:intergenic 35.0%
CCAAAATCTAATGCTTTGGT+TGG + chr2_1:77280045-77280064 Msa0226800:intron 35.0%
CCTCTTGTCAAAGTTATATG+CGG - chr2_1:77280138-77280157 None:intergenic 35.0%
!!! GAGTTTTCTGAGGCAATTTT+TGG + chr2_1:77280327-77280346 Msa0226800:CDS 35.0%
! AGGCATCACATGTTTCTAAA+TGG - chr2_1:77280377-77280396 None:intergenic 35.0%
! TTTTGTATGCTCTGCTAATG+TGG + chr2_1:77280557-77280576 Msa0226800:intron 35.0%
!!! AGCAAATGGGTTTTTTTTGC+AGG - chr2_1:77280696-77280715 None:intergenic 35.0%
AGTCATTTCATGCAGCAAAT+GGG - chr2_1:77280709-77280728 None:intergenic 35.0%
TAGTCATTTCATGCAGCAAA+TGG - chr2_1:77280710-77280729 None:intergenic 35.0%
AGGACTATGGTCGTATATTA+CGG - chr2_1:77280756-77280775 None:intergenic 35.0%
!!! TATTTTTACTTTCTGGCTGG+AGG - chr2_1:77280776-77280795 None:intergenic 35.0%
TAATTGGCAACACGAATACA+AGG + chr2_1:77280961-77280980 Msa0226800:intron 35.0%
TTTCCTACAAAGTCTGGATT+GGG - chr2_1:77281057-77281076 None:intergenic 35.0%
! TTTTCCTACAAAGTCTGGAT+TGG - chr2_1:77281058-77281077 None:intergenic 35.0%
ACATCCTTATGTTCGACTTT+GGG + chr2_1:77281108-77281127 Msa0226800:intron 35.0%
TATTCCCAAAGTCGAACATA+AGG - chr2_1:77281115-77281134 None:intergenic 35.0%
GTTTCAGTATGTCCAAATTG+TGG + chr2_1:77281271-77281290 Msa0226800:CDS 35.0%
TAAAGTTAAAGTTCCTCCTG+GGG + chr2_1:77281369-77281388 Msa0226800:CDS 35.0%
!! TATTTTAAGAGTCACTGGAG+AGG + chr2_1:77281405-77281424 Msa0226800:CDS 35.0%
!! ATTTTAAGAGTCACTGGAGA+GGG + chr2_1:77281406-77281425 Msa0226800:CDS 35.0%
GAAAGTCTTAGGCCAATTAT+TGG + chr2_1:77281486-77281505 Msa0226800:intron 35.0%
TAATTTGGTAGGGCTAAGTT+AGG - chr2_1:77281717-77281736 None:intergenic 35.0%
CCCTACCAAATTAACTTCTA+AGG + chr2_1:77281724-77281743 Msa0226800:intron 35.0%
CCTCACCTTAGAAGTTAATT+TGG - chr2_1:77281732-77281751 None:intergenic 35.0%
!! CCAAATTAACTTCTAAGGTG+AGG + chr2_1:77281729-77281748 Msa0226800:intron 35.0%
TAGGTTGTGCTAATAAAGCT+TGG - chr2_1:77281760-77281779 None:intergenic 35.0%
!! AAGCTTTATTAGCACAACCT+AGG + chr2_1:77281759-77281778 Msa0226800:intron 35.0%
TTCCACATAGACAAGAGATA+TGG - chr2_1:77281785-77281804 None:intergenic 35.0%
! ATTAATATGGGTGGAGTACT+AGG + chr2_1:77281852-77281871 Msa0226800:intron 35.0%
! TTAATATGGGTGGAGTACTA+GGG + chr2_1:77281853-77281872 Msa0226800:intron 35.0%
AGAATGCTCTTTGGTAAGAA+TGG - chr2_1:77281916-77281935 None:intergenic 35.0%
! ATATATGGAGTAGGCTTTGA+AGG - chr2_1:77282106-77282125 None:intergenic 35.0%
TTTAACAATGTTGCATCCCA+AGG - chr2_1:77282320-77282339 None:intergenic 35.0%
GAAGAGCAGAACAATAAGAA+AGG - chr2_1:77282460-77282479 None:intergenic 35.0%
!! ATATATCCTCTTTGGAGTCA+TGG + chr2_1:77282488-77282507 Msa0226800:intron 35.0%
! ATTTTTCCATGACTCCAAAG+AGG - chr2_1:77282497-77282516 None:intergenic 35.0%
GGAGTCATGGAAAAATGAAT+TGG + chr2_1:77282501-77282520 Msa0226800:intron 35.0%
AGATATACGTAAAGATCTCC+TGG - chr2_1:77282779-77282798 None:intergenic 35.0%
AACTGATTGATATTGTCGAG+CGG - chr2_1:77282847-77282866 None:intergenic 35.0%
CAGTTATCTAGAAGCTATAC+TGG + chr2_1:77282862-77282881 Msa0226800:CDS 35.0%
! TTTTGCTTCTTTTTGTAGGC+TGG + chr2_1:77282942-77282961 Msa0226800:intron 35.0%
CGAGGATAACAAAGAAAACA+AGG - chr2_1:77283039-77283058 None:intergenic 35.0%
GTCCAACTAGTTACATTCAA+GGG - chr2_1:77283200-77283219 None:intergenic 35.0%
TGTCCAACTAGTTACATTCA+AGG - chr2_1:77283201-77283220 None:intergenic 35.0%
CTTCTGTTGAAAAACACGTT+TGG + chr2_1:77283282-77283301 Msa0226800:intron 35.0%
GACTAAAACTGAAAACAGTC+TGG + chr2_1:77283322-77283341 Msa0226800:intron 35.0%
AAACAGGTAAAGACAGTTGA+AGG + chr2_1:77283606-77283625 Msa0226800:intron 35.0%
ACTTTGCATCTTCAGTTCAA+AGG + chr2_1:77283871-77283890 Msa0226800:intron 35.0%
AGAAAGAACAACATACTGGA+AGG - chr2_1:77283971-77283990 None:intergenic 35.0%
TGTTCCTATGACTGTAAGAT+GGG - chr2_1:77283995-77284014 None:intergenic 35.0%
TTGTTCCTATGACTGTAAGA+TGG - chr2_1:77283996-77284015 None:intergenic 35.0%
TCTTCATCTTCTGATTTCTC+TGG - chr2_1:77284228-77284247 None:intergenic 35.0%
CAGAAGATGAAGATGACTTA+TGG + chr2_1:77284235-77284254 Msa0226800:CDS 35.0%
AGTACATAAGGAAAAGGACA+TGG - chr2_1:77284477-77284496 None:intergenic 35.0%
!!! TCATACCCGAGATTTTTTGT+TGG + chr2_1:77284564-77284583 Msa0226800:intron 35.0%
! TTTTCTCGTTCATCAAACCT+TGG + chr2_1:77284718-77284737 Msa0226800:intron 35.0%
!! TACACTGGTAAATTTTGGCA+CGG + chr2_1:77285038-77285057 Msa0226800:three_prime_UTR 35.0%
!!! GTAGAGTAACGTTTTGAAGA+AGG - chr2_1:77285240-77285259 None:intergenic 35.0%
! CTTTCATTCTTTTGACCATG+AGG + chr2_1:77285291-77285310 Msa0226800:three_prime_UTR 35.0%
GCAATAAGCCACAACTTATC+TGG + chr2_1:77276189-77276208 Msa0226800:five_prime_UTR 40.0%
CACAACTACCAGATAAGTTG+TGG - chr2_1:77276200-77276219 None:intergenic 40.0%
CACAACTTATCTGGTAGTTG+TGG + chr2_1:77276198-77276217 Msa0226800:five_prime_UTR 40.0%
! GTATTGGTACATTACCAGAG+AGG - chr2_1:77276241-77276260 None:intergenic 40.0%
ACGCACGCTTTAATTGTTAG+TGG - chr2_1:77276322-77276341 None:intergenic 40.0%
! AAGCATGAATGAGTTGAAGG+TGG - chr2_1:77276467-77276486 None:intergenic 40.0%
! CAGAAGCATGAATGAGTTGA+AGG - chr2_1:77276470-77276489 None:intergenic 40.0%
AGGAGAAGGAGAAGAATGAA+TGG - chr2_1:77276534-77276553 None:intergenic 40.0%
TTAGAGTTGGAGAAAGTGGA+AGG - chr2_1:77276560-77276579 None:intergenic 40.0%
! GGCTTTGATTTCTTTACCAG+TGG - chr2_1:77276678-77276697 None:intergenic 40.0%
AAATCAAAGCCGCTTATCGA+AGG + chr2_1:77276687-77276706 Msa0226800:CDS 40.0%
GCGGTGTTTGGTAAAATTAG+CGG + chr2_1:77276983-77277002 Msa0226800:intron 40.0%
GAAAGTGACCATTACCAAAC+CGG + chr2_1:77277196-77277215 Msa0226800:intron 40.0%
!!! GGTCTTTTTTAGGGTCTGTT+TGG - chr2_1:77277273-77277292 None:intergenic 40.0%
!!! CCAAATGGGGGTCTTTTTTA+GGG - chr2_1:77277282-77277301 None:intergenic 40.0%
!!! ACCAAATGGGGGTCTTTTTT+AGG - chr2_1:77277283-77277302 None:intergenic 40.0%
AAGCTTGTGAAACCAAATGG+GGG - chr2_1:77277294-77277313 None:intergenic 40.0%
! AGCTAGCTTATAGCTGATAG+CGG - chr2_1:77277528-77277547 None:intergenic 40.0%
! ATTGATAACCTAGCTCGTAG+TGG - chr2_1:77277561-77277580 None:intergenic 40.0%
AGAATCAACTCTGCAGACTA+AGG - chr2_1:77277611-77277630 None:intergenic 40.0%
TGTTTGTTCCACATTTGGAG+TGG + chr2_1:77277737-77277756 Msa0226800:intron 40.0%
! GTTTTACACCACTCCAAATG+TGG - chr2_1:77277748-77277767 None:intergenic 40.0%
GTATCATCCTGATGTGAACA+AGG + chr2_1:77278058-77278077 Msa0226800:intron 40.0%
GCAAGCATGTAAGAAAACCT+CGG - chr2_1:77278414-77278433 None:intergenic 40.0%
!! CACTTTACTAGCCTTTGACT+TGG - chr2_1:77278524-77278543 None:intergenic 40.0%
! TACTCGCAAAAAGTACGGTA+AGG + chr2_1:77278661-77278680 Msa0226800:intron 40.0%
! ACTCGCAAAAAGTACGGTAA+GGG + chr2_1:77278662-77278681 Msa0226800:intron 40.0%
AAAGTACGGTAAGGGATTCT+AGG + chr2_1:77278670-77278689 Msa0226800:intron 40.0%
AAGTACGGTAAGGGATTCTA+GGG + chr2_1:77278671-77278690 Msa0226800:intron 40.0%
TCAGTCTAAACCCTAGCATA+CGG - chr2_1:77278704-77278723 None:intergenic 40.0%
GGCTATAAATACCACTCTTG+AGG - chr2_1:77278749-77278768 None:intergenic 40.0%
GTGGTATTTATAGCCTGCTA+TGG + chr2_1:77278754-77278773 Msa0226800:intron 40.0%
!! TATTTCTAGGCGGTTTCTAG+AGG + chr2_1:77278823-77278842 Msa0226800:intron 40.0%
GACCGTCATAATATTCCTAG+AGG - chr2_1:77278984-77279003 None:intergenic 40.0%
CGGTCCATACCATGTTATAA+AGG + chr2_1:77278999-77279018 Msa0226800:intron 40.0%
TCGCATGTTGCCTTCTTTAT+GGG + chr2_1:77279409-77279428 Msa0226800:intron 40.0%
!!! TTTTTTGGGCCAAATATGGG+CGG + chr2_1:77279568-77279587 Msa0226800:CDS 40.0%
! TTTTCTACCATGGATCCATC+TGG + chr2_1:77279592-77279611 Msa0226800:CDS 40.0%
CGTCGTAGTACTGTTACTAA+GGG + chr2_1:77279628-77279647 Msa0226800:CDS 40.0%
TTACTAAGGGTGAAGACATC+CGG + chr2_1:77279641-77279660 Msa0226800:CDS 40.0%
TCTTCTAGCCATATTTGCCA+AGG + chr2_1:77279694-77279713 Msa0226800:intron 40.0%
CGAATTTCGATAGATCCCAA+TGG + chr2_1:77279799-77279818 Msa0226800:intron 40.0%
!! TTGGTCATTGATTCCTACAG+AGG + chr2_1:77279867-77279886 Msa0226800:intron 40.0%
GATTCCTACAGAGGATTTCA+AGG + chr2_1:77279876-77279895 Msa0226800:intron 40.0%
TACTCCTTGAAATCCTCTGT+AGG - chr2_1:77279883-77279902 None:intergenic 40.0%
CAGAGGATTTCAAGGAGTAA+AGG + chr2_1:77279884-77279903 Msa0226800:intron 40.0%
CAAGGAGTAAAGGAAAACCT+AGG + chr2_1:77279894-77279913 Msa0226800:intron 40.0%
CCGCATATAACTTTGACAAG+AGG + chr2_1:77280135-77280154 Msa0226800:intron 40.0%
CAACAGGTATGATTTCTCCT+TGG + chr2_1:77280305-77280324 Msa0226800:intron 40.0%
! TTTCTCCTTGGAGTTTTCTG+AGG + chr2_1:77280317-77280336 Msa0226800:CDS 40.0%
AATTGCCTCAGAAAACTCCA+AGG - chr2_1:77280325-77280344 None:intergenic 40.0%
AGTGGAACATACTCTCATCT+TGG - chr2_1:77280427-77280446 None:intergenic 40.0%
! ATGAGAGTATGTTCCACTTG+TGG + chr2_1:77280429-77280448 Msa0226800:CDS 40.0%
!! CAACCCAAAAGGTGTTTGTT+CGG - chr2_1:77280478-77280497 None:intergenic 40.0%
GGACTATGGTCGTATATTAC+GGG - chr2_1:77280755-77280774 None:intergenic 40.0%
TTCCTACAAAGTCTGGATTG+GGG - chr2_1:77281056-77281075 None:intergenic 40.0%
! ACACGTTTTCCTACAAAGTC+TGG - chr2_1:77281063-77281082 None:intergenic 40.0%
GACTTTGTAGGAAAACGTGT+TGG + chr2_1:77281063-77281082 Msa0226800:intron 40.0%
!! TGTTGGTTGTTGTTTGCTGA+TGG + chr2_1:77281080-77281099 Msa0226800:intron 40.0%
GACATCCTTATGTTCGACTT+TGG + chr2_1:77281107-77281126 Msa0226800:intron 40.0%
TCAGTATGTCCAAATTGTGG+AGG + chr2_1:77281274-77281293 Msa0226800:CDS 40.0%
!! GGCAGTATTTTAAGAGTCAC+TGG + chr2_1:77281400-77281419 Msa0226800:CDS 40.0%
ATGGAAACATATACGGCATG+TGG - chr2_1:77281564-77281583 None:intergenic 40.0%
ATAGACAAGAGATATGGCCT+AGG - chr2_1:77281779-77281798 None:intergenic 40.0%
AAAGCGCGAATTAATATGGG+TGG + chr2_1:77281843-77281862 Msa0226800:intron 40.0%
! TTCTAAAGATGCTCAGGAAC+TGG - chr2_1:77281952-77281971 None:intergenic 40.0%
! GTTCCTGAGCATCTTTAGAA+AGG + chr2_1:77281952-77281971 Msa0226800:intron 40.0%
! TCTCCTTTCTAAAGATGCTC+AGG - chr2_1:77281958-77281977 None:intergenic 40.0%
! TACAGGATTTTCCATCCCTT+CGG - chr2_1:77281987-77282006 None:intergenic 40.0%
AAGGGATGGAAAATCCTGTA+AGG + chr2_1:77281987-77282006 Msa0226800:intron 40.0%
!!! CGTTAAGCTCGTGTTTTGAT+GGG - chr2_1:77282040-77282059 None:intergenic 40.0%
!! TCGTTAAGCTCGTGTTTTGA+TGG - chr2_1:77282041-77282060 None:intergenic 40.0%
ACGATCCAACATAAGACAAC+AGG + chr2_1:77282057-77282076 Msa0226800:intron 40.0%
ACTCTCCTGTTGTCTTATGT+TGG - chr2_1:77282065-77282084 None:intergenic 40.0%
CAACTATTATGCCCTCTGTT+GGG - chr2_1:77282649-77282668 None:intergenic 40.0%
ACAACTATTATGCCCTCTGT+TGG - chr2_1:77282650-77282669 None:intergenic 40.0%
TATACGTAAAGATCTCCTGG+AGG - chr2_1:77282776-77282795 None:intergenic 40.0%
TATACTGGGTTCTGTAGTGA+AGG + chr2_1:77282877-77282896 Msa0226800:CDS 40.0%
! TCTTTGTTATCCTCGAAACC+TGG + chr2_1:77283044-77283063 Msa0226800:intron 40.0%
TTGATTGTAATGCCTCAAGG+TGG - chr2_1:77283564-77283583 None:intergenic 40.0%
! CTGTTGATTGTAATGCCTCA+AGG - chr2_1:77283567-77283586 None:intergenic 40.0%
! ACATTTTCCGGCACTTAAAC+AGG + chr2_1:77283590-77283609 Msa0226800:intron 40.0%
GTCTTTACCTGTTTAAGTGC+CGG - chr2_1:77283600-77283619 None:intergenic 40.0%
TTAAACAGACCGTCAATACG+TGG + chr2_1:77283705-77283724 Msa0226800:CDS 40.0%
GAACTGAAGATGCAAAGTAG+AGG - chr2_1:77283869-77283888 None:intergenic 40.0%
! CTTGAAGAACTTGCTTCTCT+AGG + chr2_1:77283905-77283924 Msa0226800:CDS 40.0%
! GGGATTTTGAATGACTGCTT+GGG - chr2_1:77283934-77283953 None:intergenic 40.0%
GAACAACATACTGGAAGGTT+GGG - chr2_1:77283966-77283985 None:intergenic 40.0%
AGAACAACATACTGGAAGGT+TGG - chr2_1:77283967-77283986 None:intergenic 40.0%
GTTCCTATGACTGTAAGATG+GGG - chr2_1:77283994-77284013 None:intergenic 40.0%
! TTTTCTGTGACTGTTGCTGT+TGG - chr2_1:77284204-77284223 None:intergenic 40.0%
!! TAGCAAATGGAGCTCTAAAG+TGG + chr2_1:77284802-77284821 Msa0226800:CDS 40.0%
TTACAACACTAGCCCTAATC+AGG - chr2_1:77284892-77284911 None:intergenic 40.0%
TCATATAGTCTCTCCCCTTT+CGG - chr2_1:77284934-77284953 None:intergenic 40.0%
!! ACACTGGTAAATTTTGGCAC+GGG + chr2_1:77285039-77285058 Msa0226800:three_prime_UTR 40.0%
AGCTATGCAACAAACGAATG+AGG - chr2_1:77285270-77285289 None:intergenic 40.0%
!! CTGAACTGGAGTACTGGTAT+TGG - chr2_1:77276257-77276276 None:intergenic 45.0%
! TCGGATTTTATGGGTTCTGC+TGG - chr2_1:77276280-77276299 None:intergenic 45.0%
! CATGAATGAGTTGAAGGTGG+TGG - chr2_1:77276464-77276483 None:intergenic 45.0%
ACTCATTCATGCTTCTGTGC+CGG + chr2_1:77276473-77276492 Msa0226800:CDS 45.0%
AAAGTGGAAGGAGAAGGAGA+AGG - chr2_1:77276548-77276567 None:intergenic 45.0%
TTGGAGAAAGTGGAAGGAGA+AGG - chr2_1:77276554-77276573 None:intergenic 45.0%
!! TCTTTACCAGTGGCGGATTT+GGG - chr2_1:77276668-77276687 None:intergenic 45.0%
!! TTCTTTACCAGTGGCGGATT+TGG - chr2_1:77276669-77276688 None:intergenic 45.0%
ACGAGCTAACCTTCGATAAG+CGG - chr2_1:77276699-77276718 None:intergenic 45.0%
! TTATCGAAGGTTAGCTCGTC+AGG + chr2_1:77276700-77276719 Msa0226800:CDS 45.0%
! TGATTTAGGGTCTGTTTGGC+TGG + chr2_1:77276876-77276895 Msa0226800:intron 45.0%
CCCTAAAAAAGACCCCCATT+TGG + chr2_1:77277279-77277298 Msa0226800:intron 45.0%
TCAGTTATCCACTACGAGCT+AGG + chr2_1:77277550-77277569 Msa0226800:intron 45.0%
CTGCAGACTAAGGCTATGTT+TGG - chr2_1:77277601-77277620 None:intergenic 45.0%
CTGATGTGAACAAGGAACCT+GGG + chr2_1:77278066-77278085 Msa0226800:CDS 45.0%
TGATGTGAACAAGGAACCTG+GGG + chr2_1:77278067-77278086 Msa0226800:CDS 45.0%
TTAAACTTGTCAGTTGCCCC+AGG - chr2_1:77278086-77278105 None:intergenic 45.0%
!! CCGTACTTTTTGCGAGTACA+CGG - chr2_1:77278659-77278678 None:intergenic 45.0%
CCGTGTACTCGCAAAAAGTA+CGG + chr2_1:77278656-77278675 Msa0226800:intron 45.0%
AGGGTTAAGAACCGTATGCT+AGG + chr2_1:77278690-77278709 Msa0226800:intron 45.0%
GGGTTAAGAACCGTATGCTA+GGG + chr2_1:77278691-77278710 Msa0226800:intron 45.0%
CACTCTTGAGGTCATTCTCA+AGG - chr2_1:77278737-77278756 None:intergenic 45.0%
CTTGAGAATGACCTCAAGAG+TGG + chr2_1:77278735-77278754 Msa0226800:intron 45.0%
TTTATAGCCTGCTATGGGCT+TGG + chr2_1:77278760-77278779 Msa0226800:intron 45.0%
TTATAGCCTGCTATGGGCTT+GGG + chr2_1:77278761-77278780 Msa0226800:intron 45.0%
! CACAAATACCCCTGTTGCTT+GGG - chr2_1:77278803-77278822 None:intergenic 45.0%
ACACAAATACCCCTGTTGCT+TGG - chr2_1:77278804-77278823 None:intergenic 45.0%
GGCTCTTTAGTCCTCAAGAA+GGG - chr2_1:77278942-77278961 None:intergenic 45.0%
GGCTTAGAAGTCCTTCAGAA+GGG - chr2_1:77278963-77278982 None:intergenic 45.0%
AGGCTTAGAAGTCCTTCAGA+AGG - chr2_1:77278964-77278983 None:intergenic 45.0%
TGAAGGACTTCTAAGCCTCT+AGG + chr2_1:77278966-77278985 Msa0226800:intron 45.0%
TATGATCAATATGGCGAGGC+AGG + chr2_1:77279225-77279244 Msa0226800:CDS 45.0%
GCAGGAGTTAAGAGTTCAGT+CGG + chr2_1:77279243-77279262 Msa0226800:CDS 45.0%
GTCGCATGTTGCCTTCTTTA+TGG + chr2_1:77279408-77279427 Msa0226800:intron 45.0%
GTAGAAAAGCCGCCCATATT+TGG - chr2_1:77279580-77279599 None:intergenic 45.0%
ACCATGGATCCATCTGGATT+TGG + chr2_1:77279598-77279617 Msa0226800:CDS 45.0%
ATCCATCTGGATTTGGCACT+CGG + chr2_1:77279605-77279624 Msa0226800:CDS 45.0%
GCGTCGTAGTACTGTTACTA+AGG + chr2_1:77279627-77279646 Msa0226800:CDS 45.0%
ACATCCGGTGAGTTATGATG+TGG + chr2_1:77279656-77279675 Msa0226800:intron 45.0%
TGGATCAAACACTGCCCATT+GGG - chr2_1:77279817-77279836 None:intergenic 45.0%
ATGGATCAAACACTGCCCAT+TGG - chr2_1:77279818-77279837 None:intergenic 45.0%
TCTAATGCTTTGGTTGGGAG+TGG + chr2_1:77280051-77280070 Msa0226800:intron 45.0%
CTAATGCTTTGGTTGGGAGT+GGG + chr2_1:77280052-77280071 Msa0226800:intron 45.0%
GAAACATGTGATGCCTGTAC+TGG + chr2_1:77280381-77280400 Msa0226800:CDS 45.0%
!! ACTGGTACTGGTGCAAAGTT+AGG + chr2_1:77280399-77280418 Msa0226800:CDS 45.0%
AGAGTATGTTCCACTTGTGG+TGG + chr2_1:77280432-77280451 Msa0226800:CDS 45.0%
! AGGACCGAACAAACACCTTT+TGG + chr2_1:77280471-77280490 Msa0226800:CDS 45.0%
! GGACCGAACAAACACCTTTT+GGG + chr2_1:77280472-77280491 Msa0226800:CDS 45.0%
!!! ACCTTTTGGGTTGTTCTCAC+AGG + chr2_1:77280485-77280504 Msa0226800:CDS 45.0%
ACCTGTGAGAACAACCCAAA+AGG - chr2_1:77280489-77280508 None:intergenic 45.0%
GGTCGTATATTACGGGAATG+TGG - chr2_1:77280748-77280767 None:intergenic 45.0%
! TCCTACAAAGTCTGGATTGG+GGG - chr2_1:77281055-77281074 None:intergenic 45.0%
TGTCCAAATTGTGGAGGTGA+CGG + chr2_1:77281280-77281299 Msa0226800:CDS 45.0%
GAAAGTTGCCGTAAATGCAG+CGG + chr2_1:77281316-77281335 Msa0226800:CDS 45.0%
AAAGTTGCCGTAAATGCAGC+GGG + chr2_1:77281317-77281336 Msa0226800:CDS 45.0%
GGCCATATCTCTTGTCTATG+TGG + chr2_1:77281780-77281799 Msa0226800:intron 45.0%
AGAAAGGAGACTTCATCCGA+AGG + chr2_1:77281968-77281987 Msa0226800:intron 45.0%
GAAAGGAGACTTCATCCGAA+GGG + chr2_1:77281969-77281988 Msa0226800:intron 45.0%
CATCTCATCCAAGTGCTCTT+GGG - chr2_1:77282248-77282267 None:intergenic 45.0%
AGCACTTGGATGAGATGGTA+AGG + chr2_1:77282251-77282270 Msa0226800:intron 45.0%
GCACTTGGATGAGATGGTAA+GGG + chr2_1:77282252-77282271 Msa0226800:intron 45.0%
ATCTCTTCCAGCTTAACCAG+AGG + chr2_1:77282275-77282294 Msa0226800:intron 45.0%
TGGGTTTGAATCCAAGCCTT+GGG + chr2_1:77282301-77282320 Msa0226800:intron 45.0%
TAGAGACTAATTCCTCGAGC+CGG - chr2_1:77282382-77282401 None:intergenic 45.0%
TCATGTTCCTTCCCAACAGA+GGG + chr2_1:77282635-77282654 Msa0226800:intron 45.0%
TATTATGCCCTCTGTTGGGA+AGG - chr2_1:77282645-77282664 None:intergenic 45.0%
CTTGATGTGCTTGAGATACC+AGG + chr2_1:77282797-77282816 Msa0226800:CDS 45.0%
GGCCCTTGAATGTAACTAGT+TGG + chr2_1:77283195-77283214 Msa0226800:intron 45.0%
ACATTGATGTCACCACCTTG+AGG + chr2_1:77283549-77283568 Msa0226800:intron 45.0%
TCTGAACTACAAATCCCTGC+TGG + chr2_1:77283633-77283652 Msa0226800:CDS 45.0%
AAGTGGTCACCACGTATTGA+CGG - chr2_1:77283717-77283736 None:intergenic 45.0%
! CGGGATTTTGAATGACTGCT+TGG - chr2_1:77283935-77283954 None:intergenic 45.0%
GTCATTCAAAATCCCGTCCT+AGG + chr2_1:77283939-77283958 Msa0226800:CDS 45.0%
GGGGAGAAAGAACAACATAC+TGG - chr2_1:77283975-77283994 None:intergenic 45.0%
TCTCCCCATCTTACAGTCAT+AGG + chr2_1:77283988-77284007 Msa0226800:intron 45.0%
GCTGCAGAAGATAAATGCAG+TGG - chr2_1:77284141-77284160 None:intergenic 45.0%
CTGCATTTATCTTCTGCAGC+CGG + chr2_1:77284141-77284160 Msa0226800:intron 45.0%
TGCAGGACTTTCCTTACTTC+CGG - chr2_1:77284163-77284182 None:intergenic 45.0%
GGAAAGTCCTGCAGTTCAAA+TGG + chr2_1:77284170-77284189 Msa0226800:CDS 45.0%
! GACTGTTGCTGTTGGACTTT+CGG - chr2_1:77284196-77284215 None:intergenic 45.0%
CTGCAAGTTTCAGTGGTGTA+AGG - chr2_1:77284777-77284796 None:intergenic 45.0%
CTTACACCACTGAAACTTGC+AGG + chr2_1:77284775-77284794 Msa0226800:intron 45.0%
TACAGACCTGCAAGTTTCAG+TGG - chr2_1:77284784-77284803 None:intergenic 45.0%
ACTTGCAGGTCTGTAGCAAA+TGG + chr2_1:77284789-77284808 Msa0226800:intron 45.0%
GTAATGATTCGAACAGCTGC+TGG + chr2_1:77284908-77284927 Msa0226800:three_prime_UTR 45.0%
!! CACTGGTAAATTTTGGCACG+GGG + chr2_1:77285040-77285059 Msa0226800:three_prime_UTR 45.0%
TCTAGTGCAACCTCTTCAAG+GGG - chr2_1:77285105-77285124 None:intergenic 45.0%
CTCTAGTGCAACCTCTTCAA+GGG - chr2_1:77285106-77285125 None:intergenic 45.0%
TCTCTAGTGCAACCTCTTCA+AGG - chr2_1:77285107-77285126 None:intergenic 45.0%
!!! ATATTTTGTATATTTAATAT+TGG + chr2_1:77280201-77280220 Msa0226800:intron 5.0%
CAGAGAGGAAGACACTGAGT+GGG - chr2_1:77276226-77276245 None:intergenic 50.0%
! GAATGAGTTGAAGGTGGTGG+TGG - chr2_1:77276461-77276480 None:intergenic 50.0%
! GGAACGGAGATTGATTCCTC+CGG - chr2_1:77276495-77276514 None:intergenic 50.0%
CCAGGTTCCTTGTTCACATC+AGG - chr2_1:77278068-77278087 None:intergenic 50.0%
CCTGATGTGAACAAGGAACC+TGG + chr2_1:77278065-77278084 Msa0226800:CDS 50.0%
TTGCTTGGTTCCCAAGCAAC+AGG + chr2_1:77278790-77278809 Msa0226800:intron 50.0%
TGCTTGGTTCCCAAGCAACA+GGG + chr2_1:77278791-77278810 Msa0226800:intron 50.0%
AATAAGAGGGCGGTGCTTCT+AGG + chr2_1:77278856-77278875 Msa0226800:intron 50.0%
GGGCTCTTTAGTCCTCAAGA+AGG - chr2_1:77278943-77278962 None:intergenic 50.0%
GGACTAAAGAGCCCTTCTGA+AGG + chr2_1:77278949-77278968 Msa0226800:intron 50.0%
GGAGTTAAGAGTTCAGTCGG+AGG + chr2_1:77279246-77279265 Msa0226800:CDS 50.0%
GTTAAGAGTTCAGTCGGAGG+AGG + chr2_1:77279249-77279268 Msa0226800:CDS 50.0%
AGGAGGATCAAGTGCCTATG+CGG + chr2_1:77279266-77279285 Msa0226800:CDS 50.0%
! TATGGGCGGCTTTTCTACCA+TGG + chr2_1:77279582-77279601 Msa0226800:CDS 50.0%
GCCAAATCCAGATGGATCCA+TGG - chr2_1:77279602-77279621 None:intergenic 50.0%
! TGTGATGCCTGTACTGGTAC+TGG + chr2_1:77280387-77280406 Msa0226800:CDS 50.0%
CTTTGCACCAGTACCAGTAC+AGG - chr2_1:77280397-77280416 None:intergenic 50.0%
TATGTTCCACTTGTGGTGGC+AGG + chr2_1:77280436-77280455 Msa0226800:CDS 50.0%
ATGTTCCACTTGTGGTGGCA+GGG + chr2_1:77280437-77280456 Msa0226800:CDS 50.0%
AGCTAGATTGTCGCATCAGC+AGG - chr2_1:77280628-77280647 None:intergenic 50.0%
!! ACTTTCTGGCTGGAGGACTA+TGG - chr2_1:77280769-77280788 None:intergenic 50.0%
! CCTACAAAGTCTGGATTGGG+GGG - chr2_1:77281054-77281073 None:intergenic 50.0%
GTCCAAATTGTGGAGGTGAC+GGG + chr2_1:77281281-77281300 Msa0226800:CDS 50.0%
TCCAAATTGTGGAGGTGACG+GGG + chr2_1:77281282-77281301 Msa0226800:CDS 50.0%
AAGTTGCCGTAAATGCAGCG+GGG + chr2_1:77281318-77281337 Msa0226800:CDS 50.0%
GAAAGCTGGACTTGCCTTAC+AGG - chr2_1:77282004-77282023 None:intergenic 50.0%
AAGGCAAGTCCAGCTTTCCA+CGG + chr2_1:77282006-77282025 Msa0226800:intron 50.0%
TTTGATGGGACGTTTGTCCG+TGG - chr2_1:77282026-77282045 None:intergenic 50.0%
CCATCTCATCCAAGTGCTCT+TGG - chr2_1:77282249-77282268 None:intergenic 50.0%
!! CCAAGAGCACTTGGATGAGA+TGG + chr2_1:77282246-77282265 Msa0226800:intron 50.0%
CAAGGCTTGGATTCAAACCC+AGG - chr2_1:77282302-77282321 None:intergenic 50.0%
CTGGGTTTGAATCCAAGCCT+TGG + chr2_1:77282300-77282319 Msa0226800:intron 50.0%
CAATGTTGCATCCCAAGGCT+TGG - chr2_1:77282315-77282334 None:intergenic 50.0%
AGAGACTAATTCCTCGAGCC+GGG - chr2_1:77282381-77282400 None:intergenic 50.0%
CTCATGTTCCTTCCCAACAG+AGG + chr2_1:77282634-77282653 Msa0226800:intron 50.0%
ACATTAGGGCACATCATGCC+AGG - chr2_1:77283072-77283091 None:intergenic 50.0%
! CTTCAGTTCAAAGGAGCGTG+AGG + chr2_1:77283880-77283899 Msa0226800:intron 50.0%
ATACTGGAAGGTTGGGTCCT+AGG - chr2_1:77283959-77283978 None:intergenic 50.0%
ATCTTCTGCAGCCGGAAGTA+AGG + chr2_1:77284149-77284168 Msa0226800:intron 50.0%
CTTTCGGCCATTTGAACTGC+AGG - chr2_1:77284180-77284199 None:intergenic 50.0%
!!! TATTTTGGCCCCCCTTGAAG+AGG + chr2_1:77285092-77285111 Msa0226800:three_prime_UTR 50.0%
TAGTGCAACCTCTTCAAGGG+GGG - chr2_1:77285103-77285122 None:intergenic 50.0%
CTAGTGCAACCTCTTCAAGG+GGG - chr2_1:77285104-77285123 None:intergenic 50.0%
CCAGAGAGGAAGACACTGAG+TGG - chr2_1:77276227-77276246 None:intergenic 55.0%
CCACTCAGTGTCTTCCTCTC+TGG + chr2_1:77276224-77276243 Msa0226800:five_prime_UTR 55.0%
! TGCTGGCTGAACTGGAGTAC+TGG - chr2_1:77276263-77276282 None:intergenic 55.0%
! ATGGGTTCTGCTGGCTGAAC+TGG - chr2_1:77276271-77276290 None:intergenic 55.0%
!! GTTGAAGGTGGTGGTGGAAG+TGG - chr2_1:77276455-77276474 None:intergenic 55.0%
CATTCATGCTTCTGTGCCGG+AGG + chr2_1:77276476-77276495 Msa0226800:CDS 55.0%
GCTTGGTTCCCAAGCAACAG+GGG + chr2_1:77278792-77278811 Msa0226800:intron 55.0%
ATGCTTTGGTTGGGAGTGGG+TGG + chr2_1:77280055-77280074 Msa0226800:intron 55.0%
!! AGTGGGTGGTGGAAGGATCA+GGG + chr2_1:77280069-77280088 Msa0226800:intron 55.0%
TGTTCCACTTGTGGTGGCAG+GGG + chr2_1:77280438-77280457 Msa0226800:CDS 55.0%
CCCCCCAATCCAGACTTTGT+AGG + chr2_1:77281051-77281070 Msa0226800:intron 55.0%
TCCCCGTCACCTCCACAATT+TGG - chr2_1:77281286-77281305 None:intergenic 55.0%
GTCCTTCCCCGCTGCATTTA+CGG - chr2_1:77281327-77281346 None:intergenic 55.0%
AGGGTGATGCTGGACCAAGA+GGG + chr2_1:77281425-77281444 Msa0226800:CDS 55.0%
GGAGACTTCATCCGAAGGGA+TGG + chr2_1:77281973-77281992 Msa0226800:intron 55.0%
GACGTTTGTCCGTGGAAAGC+TGG - chr2_1:77282018-77282037 None:intergenic 55.0%
!! GTTGTCGACCCAAGAGCACT+TGG + chr2_1:77282237-77282256 Msa0226800:intron 55.0%
TCCAGCTTAACCAGAGGTCC+TGG + chr2_1:77282281-77282300 Msa0226800:intron 55.0%
CCAGCTTAACCAGAGGTCCT+GGG + chr2_1:77282282-77282301 Msa0226800:intron 55.0%
GGATTCAAACCCAGGACCTC+TGG - chr2_1:77282294-77282313 None:intergenic 55.0%
ACTAATTCCTCGAGCCGGGT+AGG - chr2_1:77282377-77282396 None:intergenic 55.0%
TGTCATAACAGGGGTCCTCC+AGG + chr2_1:77282758-77282777 Msa0226800:intron 55.0%
TATCCTCGAAACCTGGCACC+TGG + chr2_1:77283051-77283070 Msa0226800:intron 55.0%
GACGAGGACATCTCCAGGTT+GGG - chr2_1:77283661-77283680 None:intergenic 55.0%
GAGATGTCCTCGTCCTTGCA+AGG + chr2_1:77283667-77283686 Msa0226800:CDS 55.0%
TGTCCTCGTCCTTGCAAGGA+AGG + chr2_1:77283671-77283690 Msa0226800:CDS 55.0%
GTCCTCGTCCTTGCAAGGAA+GGG + chr2_1:77283672-77283691 Msa0226800:CDS 55.0%
TCGGTACACCCTTCCTTGCA+AGG - chr2_1:77283683-77283702 None:intergenic 55.0%
TGGAAGGTTGGGTCCTAGGA+CGG - chr2_1:77283955-77283974 None:intergenic 55.0%
!! GGTGGTGGTGGAAGTGGAAG+TGG - chr2_1:77276449-77276468 None:intergenic 60.0%
CCAAAGCCCAAGCCCATAGC+AGG - chr2_1:77278770-77278789 None:intergenic 60.0%
CCTGCTATGGGCTTGGGCTT+TGG + chr2_1:77278767-77278786 Msa0226800:intron 60.0%
! GGGCTTGGGCTTTGGTTGCT+TGG + chr2_1:77278775-77278794 Msa0226800:intron 60.0%
!! ACCTCTGGAGCCCTTCTGGA+GGG + chr2_1:77278888-77278907 Msa0226800:intron 60.0%
TAAAGCCCCCAGAAGGGCTC+GGG - chr2_1:77278916-77278935 None:intergenic 60.0%
CTAAAGCCCCCAGAAGGGCT+CGG - chr2_1:77278917-77278936 None:intergenic 60.0%
! GAGCCCTTCTGGGGGCTTTA+GGG + chr2_1:77278916-77278935 Msa0226800:intron 60.0%
!! GGGCTTTAGGGCCCTTCTTG+AGG + chr2_1:77278928-77278947 Msa0226800:intron 60.0%
CGCCGAGTGCCAAATCCAGA+TGG - chr2_1:77279610-77279629 None:intergenic 60.0%
CTTTGGTTGGGAGTGGGTGG+TGG + chr2_1:77280058-77280077 Msa0226800:intron 60.0%
!! GAGTGGGTGGTGGAAGGATC+AGG + chr2_1:77280068-77280087 Msa0226800:intron 60.0%
!! GTGGGTGGTGGAAGGATCAG+GGG + chr2_1:77280070-77280089 Msa0226800:intron 60.0%
TGCCGTAAATGCAGCGGGGA+AGG + chr2_1:77281322-77281341 Msa0226800:CDS 60.0%
ATACTGCCTGCGCTAACCCC+AGG - chr2_1:77281388-77281407 None:intergenic 60.0%
GTCACTGGAGAGGGTGATGC+TGG + chr2_1:77281415-77281434 Msa0226800:CDS 60.0%
GAGGGTGATGCTGGACCAAG+AGG + chr2_1:77281424-77281443 Msa0226800:CDS 60.0%
CCCAGGACCTCTGGTTAAGC+TGG - chr2_1:77282285-77282304 None:intergenic 60.0%
CCACCCATTGCGATCCTACC+CGG + chr2_1:77282360-77282379 Msa0226800:intron 60.0%
GAGCCGGGTAGGATCGCAAT+GGG - chr2_1:77282366-77282385 None:intergenic 60.0%
GTCTCTACAGTTGCGCGCAG+AGG + chr2_1:77282395-77282414 Msa0226800:intron 60.0%
ATGCCAGGTGCCAGGTTTCG+AGG - chr2_1:77283057-77283076 None:intergenic 60.0%
ATCCCTGCTGGTACCCAACC+TGG + chr2_1:77283645-77283664 Msa0226800:CDS 60.0%
! CTCCAGGTTGGGTACCAGCA+GGG - chr2_1:77283650-77283669 None:intergenic 60.0%
! TCTCCAGGTTGGGTACCAGC+AGG - chr2_1:77283651-77283670 None:intergenic 60.0%
GGACGAGGACATCTCCAGGT+TGG - chr2_1:77283662-77283681 None:intergenic 60.0%
GCAAGGACGAGGACATCTCC+AGG - chr2_1:77283666-77283685 None:intergenic 60.0%
CACCCTTCCTTGCAAGGACG+AGG - chr2_1:77283677-77283696 None:intergenic 60.0%
GGAAGGTTGGGTCCTAGGAC+GGG - chr2_1:77283954-77283973 None:intergenic 60.0%
TCGAACAGCTGCTGGCCGAA+AGG + chr2_1:77284916-77284935 Msa0226800:three_prime_UTR 60.0%
CGAACAGCTGCTGGCCGAAA+GGG + chr2_1:77284917-77284936 Msa0226800:three_prime_UTR 60.0%
GAACAGCTGCTGGCCGAAAG+GGG + chr2_1:77284918-77284937 Msa0226800:three_prime_UTR 60.0%
GGCGTTCCCAAATCCGCCAC+TGG + chr2_1:77276659-77276678 Msa0226800:CDS 65.0%
TCTAGGCGAGCCAGGACCTC+TGG + chr2_1:77278873-77278892 Msa0226800:intron 65.0%
CAGAAGGGCTCCAGAGGTCC+TGG - chr2_1:77278886-77278905 None:intergenic 65.0%
!! CAGGACCTCTGGAGCCCTTC+TGG + chr2_1:77278884-77278903 Msa0226800:intron 65.0%
!! GACCTCTGGAGCCCTTCTGG+AGG + chr2_1:77278887-77278906 Msa0226800:intron 65.0%
! CGAGCCCTTCTGGGGGCTTT+AGG + chr2_1:77278915-77278934 Msa0226800:intron 65.0%
GGGCCCTAAAGCCCCCAGAA+GGG - chr2_1:77278922-77278941 None:intergenic 65.0%
AGGGCCCTAAAGCCCCCAGA+AGG - chr2_1:77278923-77278942 None:intergenic 65.0%
!! GGTTGGGAGTGGGTGGTGGA+AGG + chr2_1:77280062-77280081 Msa0226800:intron 65.0%
CTGACCCCTGCCACCACAAG+TGG - chr2_1:77280445-77280464 None:intergenic 65.0%
CACTTGTGGTGGCAGGGGTC+AGG + chr2_1:77280443-77280462 Msa0226800:CDS 65.0%
GTGGCAGGGGTCAGGTGATG+AGG + chr2_1:77280451-77280470 Msa0226800:CDS 65.0%
GCAGCGGGGAAGGACGCATA+CGG + chr2_1:77281332-77281351 Msa0226800:CDS 65.0%
CAGCGGGGAAGGACGCATAC+GGG + chr2_1:77281333-77281352 Msa0226800:CDS 65.0%
! GTTCCTCCTGGGGTTAGCGC+AGG + chr2_1:77281379-77281398 Msa0226800:CDS 65.0%
CCGGGTAGGATCGCAATGGG+TGG - chr2_1:77282363-77282382 None:intergenic 65.0%
CGAGCCGGGTAGGATCGCAA+TGG - chr2_1:77282367-77282386 None:intergenic 65.0%
! TTGCGATCCTACCCGGCTCG+AGG + chr2_1:77282367-77282386 Msa0226800:intron 65.0%
AGTTGCGCGCAGAGGACACC+CGG + chr2_1:77282403-77282422 Msa0226800:intron 65.0%
GGCACATCATGCCAGGTGCC+AGG - chr2_1:77283065-77283084 None:intergenic 65.0%
GCGGTGCTTCTAGGCGAGCC+AGG + chr2_1:77278865-77278884 Msa0226800:intron 70.0%
GCCCTCCAGAAGGGCTCCAG+AGG - chr2_1:77278892-77278911 None:intergenic 70.0%
CTGCCTGCGCTAACCCCAGG+AGG - chr2_1:77281385-77281404 None:intergenic 70.0%
GGCTCGGGCGCCCTCCAGAA+GGG - chr2_1:77278901-77278920 None:intergenic 75.0%
!! GAGGGCGCCCGAGCCCTTCT+GGG + chr2_1:77278906-77278925 Msa0226800:intron 75.0%
! AGGGCGCCCGAGCCCTTCTG+GGG + chr2_1:77278907-77278926 Msa0226800:intron 75.0%
! GGGCTCGGGCGCCCTCCAGA+AGG - chr2_1:77278902-77278921 None:intergenic 80.0%
!!! GGAGGGCGCCCGAGCCCTTC+TGG + chr2_1:77278905-77278924 Msa0226800:intron 80.0%
! GGGCGCCCGAGCCCTTCTGG+GGG + chr2_1:77278908-77278927 Msa0226800:intron 80.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 77276186 77285326 77276186 ID=Msa0226800;Name=Msa0226800
chr2_1 mRNA 77276186 77285326 77276186 ID=Msa0226800-mRNA-1;Parent=Msa0226800;Name=Msa0226800-mRNA-1;_AED=0.04;_eAED=0.04;_QI=233|1|1|1|0.90|0.83|12|463|501
chr2_1 exon 77276186 77276721 77276186 ID=Msa0226800-mRNA-1:exon:23447;Parent=Msa0226800-mRNA-1
chr2_1 exon 77278059 77278127 77278059 ID=Msa0226800-mRNA-1:exon:23448;Parent=Msa0226800-mRNA-1
chr2_1 exon 77279195 77279287 77279195 ID=Msa0226800-mRNA-1:exon:23449;Parent=Msa0226800-mRNA-1
chr2_1 exon 77279541 77279662 77279541 ID=Msa0226800-mRNA-1:exon:23450;Parent=Msa0226800-mRNA-1
chr2_1 exon 77280311 77280506 77280311 ID=Msa0226800-mRNA-1:exon:23451;Parent=Msa0226800-mRNA-1
chr2_1 exon 77281271 77281446 77281271 ID=Msa0226800-mRNA-1:exon:23452;Parent=Msa0226800-mRNA-1
chr2_1 exon 77282769 77282898 77282769 ID=Msa0226800-mRNA-1:exon:23453;Parent=Msa0226800-mRNA-1
chr2_1 exon 77283612 77283772 77283612 ID=Msa0226800-mRNA-1:exon:23454;Parent=Msa0226800-mRNA-1
chr2_1 exon 77283886 77283974 77283886 ID=Msa0226800-mRNA-1:exon:23455;Parent=Msa0226800-mRNA-1
chr2_1 exon 77284160 77284280 77284160 ID=Msa0226800-mRNA-1:exon:23456;Parent=Msa0226800-mRNA-1
chr2_1 exon 77284797 77285147 77284797 ID=Msa0226800-mRNA-1:exon:23457;Parent=Msa0226800-mRNA-1
chr2_1 exon 77285169 77285326 77285169 ID=Msa0226800-mRNA-1:exon:23458;Parent=Msa0226800-mRNA-1
chr2_1 five_prime_UTR 77276186 77276418 77276186 ID=Msa0226800-mRNA-1:five_prime_utr;Parent=Msa0226800-mRNA-1
chr2_1 CDS 77276419 77276721 77276419 ID=Msa0226800-mRNA-1:cds;Parent=Msa0226800-mRNA-1
chr2_1 CDS 77278059 77278127 77278059 ID=Msa0226800-mRNA-1:cds;Parent=Msa0226800-mRNA-1
chr2_1 CDS 77279195 77279287 77279195 ID=Msa0226800-mRNA-1:cds;Parent=Msa0226800-mRNA-1
chr2_1 CDS 77279541 77279662 77279541 ID=Msa0226800-mRNA-1:cds;Parent=Msa0226800-mRNA-1
chr2_1 CDS 77280311 77280506 77280311 ID=Msa0226800-mRNA-1:cds;Parent=Msa0226800-mRNA-1
chr2_1 CDS 77281271 77281446 77281271 ID=Msa0226800-mRNA-1:cds;Parent=Msa0226800-mRNA-1
chr2_1 CDS 77282769 77282898 77282769 ID=Msa0226800-mRNA-1:cds;Parent=Msa0226800-mRNA-1
chr2_1 CDS 77283612 77283772 77283612 ID=Msa0226800-mRNA-1:cds;Parent=Msa0226800-mRNA-1
chr2_1 CDS 77283886 77283974 77283886 ID=Msa0226800-mRNA-1:cds;Parent=Msa0226800-mRNA-1
chr2_1 CDS 77284160 77284280 77284160 ID=Msa0226800-mRNA-1:cds;Parent=Msa0226800-mRNA-1
chr2_1 CDS 77284797 77284842 77284797 ID=Msa0226800-mRNA-1:cds;Parent=Msa0226800-mRNA-1
chr2_1 three_prime_UTR 77284843 77285147 77284843 ID=Msa0226800-mRNA-1:three_prime_utr;Parent=Msa0226800-mRNA-1
chr2_1 three_prime_UTR 77285169 77285326 77285169 ID=Msa0226800-mRNA-1:three_prime_utr;Parent=Msa0226800-mRNA-1
Gene Sequence

>Msa0226800

ATGGCAGTTATATCACTCTCTCTTCTTCCACTTCCACTTCCACCACCACCTTCAACTCATTCATGCTTCTGTGCCGGAGGAATCAATCTCCGTTCCCACAACAATTTCCTTTCCATTCATTCTTCTCCTTCTCCTTCTCCTTCCACTTTCTCCAACTCTAATACTAAATTCTCTTCTGCTACTAGACCAAAACGCTTTCTCACTGTTTTCGCTGCTTCTTCTGATTATTACTCTACTCTTGGCGTTCCCAAATCCGCCACTGGTAAAGAAATCAAAGCCGCTTATCGAAGGTTAGCTCGTCAGTATCATCCTGATGTGAACAAGGAACCTGGGGCAACTGACAAGTTTAAAGAGATTAGTAATGCCTATGAGGTGCTATCAGATGACAAAAAGAGGGCTTTGTATGATCAATATGGCGAGGCAGGAGTTAAGAGTTCAGTCGGAGGAGGATCAAGTGCCTATGCGACAAATCCATTTGATTTATTTGAGACATTTTTTGGGCCAAATATGGGCGGCTTTTCTACCATGGATCCATCTGGATTTGGCACTCGGCGTCGTAGTACTGTTACTAAGGGTGAAGACATCCGGTATGATTTCTCCTTGGAGTTTTCTGAGGCAATTTTTGGAACAGAGAAAGAATTTGAGCTTTTCCATTTAGAAACATGTGATGCCTGTACTGGTACTGGTGCAAAGTTAGGCTCCAAGATGAGAGTATGTTCCACTTGTGGTGGCAGGGGTCAGGTGATGAGGACCGAACAAACACCTTTTGGGTTGTTCTCACAGGTTTCAGTATGTCCAAATTGTGGAGGTGACGGGGAAGTCATATCTGAAAGTTGCCGTAAATGCAGCGGGGAAGGACGCATACGGGTTAAGAAAAATATTAAAGTTAAAGTTCCTCCTGGGGTTAGCGCAGGCAGTATTTTAAGAGTCACTGGAGAGGGTGATGCTGGACCAAGAGGGGGTCCTCCAGGAGATCTTTACGTATATCTTGATGTGCTTGAGATACCAGGAATTCAAAGAGATGATATTAATCTCCGCTCGACAATATCAATCAGTTATCTAGAAGCTATACTGGGTTCTGTAGTGAAGGTAAAGACAGTTGAAGGCACTTCTGAACTACAAATCCCTGCTGGTACCCAACCTGGAGATGTCCTCGTCCTTGCAAGGAAGGGTGTACCGAAATTAAACAGACCGTCAATACGTGGTGACCACTTATTTACTGTTAAAGTTACAATACCAAAACGTATTAGTTCAAAGGAGCGTGAGGTGCTTGAAGAACTTGCTTCTCTAGGCAACCCAAGCAGTCATTCAAAATCCCGTCCTAGGACCCAACCTTCCACCGGAAGTAAGGAAAGTCCTGCAGTTCAAATGGCCGAAAGTCCAACAGCAACAGTCACAGAAAAACCAGAGAAATCAGAAGATGAAGATGACTTATGGAATAAACTAAAAAACGTGGCTGGGTCTGTAGCAAATGGAGCTCTAAAGTGGTTTAAAGACAATCTCTAG
Protein sequence

>Msa0226800

MAVISLSLLPLPLPPPPSTHSCFCAGGINLRSHNNFLSIHSSPSPSPSTFSNSNTKFSSATRPKRFLTVFAASSDYYSTLGVPKSATGKEIKAAYRRLARQYHPDVNKEPGATDKFKEISNAYEVLSDDKKRALYDQYGEAGVKSSVGGGSSAYATNPFDLFETFFGPNMGGFSTMDPSGFGTRRRSTVTKGEDIRYDFSLEFSEAIFGTEKEFELFHLETCDACTGTGAKLGSKMRVCSTCGGRGQVMRTEQTPFGLFSQVSVCPNCGGDGEVISESCRKCSGEGRIRVKKNIKVKVPPGVSAGSILRVTGEGDAGPRGGPPGDLYVYLDVLEIPGIQRDDINLRSTISISYLEAILGSVVKVKTVEGTSELQIPAGTQPGDVLVLARKGVPKLNRPSIRGDHLFTVKVTIPKRISSKEREVLEELASLGNPSSHSKSRPRTQPSTGSKESPAVQMAESPTATVTEKPEKSEDEDDLWNKLKNVAGSVANGALKWFKDNL*