Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0895390 | GAU40921.1 | 93.204 | 103 | 7 | 0 | 1 | 103 | 1 | 103 | 2.80e-55 | 177 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0895390 | A0A2Z6NB10 | 93.204 | 103 | 7 | 0 | 1 | 103 | 1 | 103 | 1.34e-55 | 177 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0048180 | Msa0895390 | 0.806013 | 1.010662e-49 | -8.615850e-47 |
| Msa0082280 | Msa0895390 | 0.813042 | 3.126171e-51 | -8.615850e-47 |
| Msa0094580 | Msa0895390 | 0.822211 | 2.674323e-53 | -8.615850e-47 |
| Msa0115370 | Msa0895390 | 0.802345 | 5.864202e-49 | -8.615850e-47 |
| Msa0607690 | Msa0895390 | 0.807722 | 4.398389e-50 | -8.615850e-47 |
| Msa0631250 | Msa0895390 | 0.809222 | 2.104657e-50 | -8.615850e-47 |
| Msa0666230 | Msa0895390 | 0.822551 | 2.229412e-53 | -8.615850e-47 |
| Msa0687630 | Msa0895390 | 0.808929 | 2.432366e-50 | -8.615850e-47 |
| Msa0808800 | Msa0895390 | 0.812432 | 4.253193e-51 | -8.615850e-47 |
| Msa0121820 | Msa0895390 | 0.839569 | 1.464984e-57 | -8.615850e-47 |
| Msa0127850 | Msa0895390 | 0.803337 | 3.657954e-49 | -8.615850e-47 |
| Msa0166750 | Msa0895390 | 0.828133 | 1.064757e-54 | -8.615850e-47 |
| Msa0167480 | Msa0895390 | 0.809236 | 2.090314e-50 | -8.615850e-47 |
| Msa0174770 | Msa0895390 | 0.832677 | 8.245360e-56 | -8.615850e-47 |
| Msa0181610 | Msa0895390 | 0.803556 | 3.295123e-49 | -8.615850e-47 |
| Msa0218830 | Msa0895390 | 0.816723 | 4.774973e-52 | -8.615850e-47 |
| Msa0224560 | Msa0895390 | 0.822166 | 2.739547e-53 | -8.615850e-47 |
| Msa0376820 | Msa0895390 | 0.828725 | 7.662620e-55 | -8.615850e-47 |
| Msa0384880 | Msa0895390 | 0.826740 | 2.297803e-54 | -8.615850e-47 |
| Msa0423750 | Msa0895390 | 0.816707 | 4.812378e-52 | -8.615850e-47 |
| Msa0443390 | Msa0895390 | 0.829005 | 6.556949e-55 | -8.615850e-47 |
| Msa0472130 | Msa0895390 | 0.826590 | 2.495044e-54 | -8.615850e-47 |
| Msa0481480 | Msa0895390 | 0.839763 | 1.304301e-57 | -8.615850e-47 |
| Msa0266370 | Msa0895390 | 0.821856 | 3.232466e-53 | -8.615850e-47 |
| Msa0304590 | Msa0895390 | 0.828221 | 1.013926e-54 | -8.615850e-47 |
| Msa0304660 | Msa0895390 | 0.831611 | 1.513604e-55 | -8.615850e-47 |
| Msa0331700 | Msa0895390 | 0.832194 | 1.086522e-55 | -8.615850e-47 |
| Msa0348830 | Msa0895390 | 0.820410 | 6.960293e-53 | -8.615850e-47 |
| Msa0508590 | Msa0895390 | 0.801813 | 7.542210e-49 | -8.615850e-47 |
| Msa0508630 | Msa0895390 | 0.802832 | 4.652543e-49 | -8.615850e-47 |
| Msa0521050 | Msa0895390 | 0.835186 | 1.942308e-56 | -8.615850e-47 |
| Msa0526540 | Msa0895390 | 0.810712 | 1.005539e-50 | -8.615850e-47 |
| Msa0576940 | Msa0895390 | 0.807170 | 5.762042e-50 | -8.615850e-47 |
| Msa0580280 | Msa0895390 | 0.800153 | 1.647050e-48 | -8.615850e-47 |
| Msa0581070 | Msa0895390 | 0.818267 | 2.143060e-52 | -8.615850e-47 |
| Msa0895390 | Msa0960830 | 0.832357 | 9.897245e-56 | -8.615850e-47 |
| Msa0895390 | Msa0994290 | 0.874218 | 8.017004e-68 | -8.615850e-47 |
| Msa0895390 | Msa1019240 | 0.803939 | 2.743669e-49 | -8.615850e-47 |
| Msa0895390 | Msa1019260 | 0.801639 | 8.187774e-49 | -8.615850e-47 |
| Msa0895390 | Msa1039900 | 0.808361 | 3.216397e-50 | -8.615850e-47 |
| Msa0895390 | Msa1085470 | 0.862665 | 4.313736e-64 | -8.615850e-47 |
| Msa0895390 | Msa1125500 | 0.817703 | 2.873394e-52 | -8.615850e-47 |
| Msa0895390 | Msa1126770 | 0.818392 | 2.008162e-52 | -8.615850e-47 |
| Msa0895390 | Msa1166870 | 0.825001 | 5.947320e-54 | -8.615850e-47 |
| Msa0895390 | Msa1208020 | 0.811182 | 7.954465e-51 | -8.615850e-47 |
| Msa0895390 | Msa1227690 | 0.824922 | 6.208675e-54 | -8.615850e-47 |
| Msa0895390 | Msa1234980 | 0.811929 | 5.474481e-51 | -8.615850e-47 |
| Msa0895390 | Msa1298050 | 0.803390 | 3.567576e-49 | -8.615850e-47 |
| Msa0895390 | Msa1310690 | 0.808938 | 2.421823e-50 | -8.615850e-47 |
| Msa0895390 | Msa1329510 | 0.812956 | 3.266362e-51 | -8.615850e-47 |
| Msa0895390 | Msa1329540 | 0.811765 | 5.942787e-51 | -8.615850e-47 |
| Msa0895390 | Msa1331250 | 0.800631 | 1.316692e-48 | -8.615850e-47 |
| Msa0895390 | Msa1345450 | 0.838454 | 2.848611e-57 | -8.615850e-47 |
| Msa0895390 | Msa1349570 | 0.820891 | 5.396348e-53 | -8.615850e-47 |
| Msa0895390 | Msa1363330 | 0.806128 | 9.560689e-50 | -8.615850e-47 |
| Msa0895390 | Msa1369190 | 0.846235 | 2.466432e-59 | -8.615850e-47 |
| Msa0895390 | Msa1370860 | 0.825355 | 4.904715e-54 | -8.615850e-47 |
| Msa0895390 | Msa1386600 | 0.805901 | 1.067032e-49 | -8.615850e-47 |
| Msa0895390 | Msa1413260 | 0.805001 | 1.648107e-49 | -8.615850e-47 |
| Msa0895390 | Msa1425670 | 0.814719 | 1.335222e-51 | -8.615850e-47 |
| Msa0895390 | Msa1442850 | 0.832389 | 9.719664e-56 | -8.615850e-47 |
| Msa0895390 | Msa1450280 | 0.822641 | 2.124382e-53 | -8.615850e-47 |
| Msa0895390 | Msa1456050 | 0.889918 | 1.573927e-73 | -8.615850e-47 |
| Msa0895390 | Msa1462860 | 0.829526 | 4.899676e-55 | -8.615850e-47 |
| Msa0895390 | Msa1465080 | 0.820758 | 5.791661e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0895390 | MtrunA17_Chr5g0420491 | 98.851 | 87 | 1 | 0 | 1 | 87 | 1 | 87 | 6.06e-59 | 177 |
| Msa0895390 | MtrunA17_Chr6g0479251 | 98.851 | 87 | 1 | 0 | 1 | 87 | 1 | 87 | 6.47e-59 | 177 |
| Msa0895390 | MtrunA17_Chr8g0391491 | 44.706 | 85 | 47 | 0 | 1 | 85 | 1 | 85 | 8.16e-20 | 77.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0895390 | AT1G48440.1 | 70.115 | 87 | 26 | 0 | 1 | 87 | 1 | 87 | 1.41e-41 | 133 |
| Msa0895390 | AT3G17780.1 | 70.115 | 87 | 26 | 0 | 1 | 87 | 1 | 87 | 8.68e-35 | 116 |
| Msa0895390 | AT5G17190.1 | 45.882 | 85 | 46 | 0 | 1 | 85 | 1 | 85 | 4.20e-20 | 79.0 |
| Msa0895390 | AT3G03160.1 | 44.706 | 85 | 47 | 0 | 1 | 85 | 1 | 85 | 8.74e-19 | 75.9 |
Find 34 sgRNAs with CRISPR-Local
Find 299 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGGCTAAGTTAAGTAATTT+TGG | 0.154686 | 6_1:-83232305 | None:intergenic |
| TTTGCTGGGTTTCAGCTTCT+TGG | 0.198760 | 6_1:+83232645 | Msa0895390:CDS |
| CACTGCAATGCCATCGCTTA+TGG | 0.233435 | 6_1:-83232486 | None:intergenic |
| CCATGCTTTGAATATCCTTC+TGG | 0.286675 | 6_1:-83236717 | None:intergenic |
| CTTTGTTTGAAGTGCTTAGA+AGG | 0.338557 | 6_1:-83237157 | None:intergenic |
| ATGTACCAAACCTTGAACTA+TGG | 0.340575 | 6_1:+83236864 | Msa0895390:three_prime_UTR |
| ATATTTCACCTATTATATAT+AGG | 0.362870 | 6_1:-83236984 | None:intergenic |
| TGATTTAGCCTATATATAAT+AGG | 0.405672 | 6_1:+83236976 | Msa0895390:three_prime_UTR |
| GATGAGTGTGCCATAGTTCA+AGG | 0.416021 | 6_1:-83236874 | None:intergenic |
| CCTTCTGGAACTTGCAAATA+CGG | 0.424179 | 6_1:-83236702 | None:intergenic |
| AAACGGTTCCTCAACAGCTT+TGG | 0.429844 | 6_1:-83232573 | None:intergenic |
| GTTTGTTTGTAGATATATAC+TGG | 0.433318 | 6_1:+83235352 | Msa0895390:intron |
| GATGTGAGTGAGACTGATTT+TGG | 0.439810 | 6_1:-83232367 | None:intergenic |
| AAATTCATCATTAAAGCAAA+AGG | 0.466920 | 6_1:+83232393 | Msa0895390:five_prime_UTR |
| TGAGGGATCTTTAGTTTGTA+CGG | 0.471618 | 6_1:+83236821 | Msa0895390:three_prime_UTR |
| ATTTCTTCGTTATTATCGAT+CGG | 0.516001 | 6_1:-83232425 | None:intergenic |
| GTGTGCCATAGTTCAAGGTT+TGG | 0.517406 | 6_1:-83236869 | None:intergenic |
| TTCCTCAACAGCTTTGGTGA+TGG | 0.517776 | 6_1:-83232567 | None:intergenic |
| AGAAGCTGAAACCCAGCAAA+GGG | 0.519753 | 6_1:-83232642 | None:intergenic |
| TTCCATCACCAAAGCTGTTG+AGG | 0.538639 | 6_1:+83232565 | Msa0895390:CDS |
| GTGAAATCAGAGAAGTCAAA+CGG | 0.569748 | 6_1:-83232590 | None:intergenic |
| GTTTGTAGATATATACTGGA+AGG | 0.575505 | 6_1:+83235356 | Msa0895390:intron |
| AAGGGAACAATGAAAAGCGC+AGG | 0.586062 | 6_1:-83232624 | None:intergenic |
| AAGAAGCTGAAACCCAGCAA+AGG | 0.595675 | 6_1:-83232643 | None:intergenic |
| CCGTATTTGCAAGTTCCAGA+AGG | 0.597829 | 6_1:+83236702 | Msa0895390:CDS |
| CCAGAAGGATATTCAAAGCA+TGG | 0.600664 | 6_1:+83236717 | Msa0895390:CDS |
| CATAAGCGATGGCATTGCAG+TGG | 0.602700 | 6_1:+83232487 | Msa0895390:exon |
| TATACTGGAAGGCTGAGCAT+AGG | 0.629820 | 6_1:+83235367 | Msa0895390:CDS |
| AGCTTCAATAGCCACCACAT+AGG | 0.668450 | 6_1:-83232520 | None:intergenic |
| AGCAGCAGTACAAACATCAG+AGG | 0.677855 | 6_1:-83235400 | None:intergenic |
| GTGGATGATACTCACCTATG+TGG | 0.692942 | 6_1:+83232506 | Msa0895390:CDS |
| GATGATACTCACCTATGTGG+TGG | 0.722992 | 6_1:+83232509 | Msa0895390:CDS |
| GAAGGATATTCAAAGCATGG+AGG | 0.736068 | 6_1:+83236720 | Msa0895390:CDS |
| TGGTACATCATACATCACAG+TGG | 0.808198 | 6_1:-83236849 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATTTTTTGAAGATTTTTT+TGG | - | chr6_1:83232343-83232362 | None:intergenic | 10.0% |
| !!! | TTTGTATCATTTTTTAAATT+TGG | + | chr6_1:83233274-83233293 | Msa0895390:intron | 10.0% |
| !!! | TTGTATCATTTTTTAAATTT+GGG | + | chr6_1:83233275-83233294 | Msa0895390:intron | 10.0% |
| !!! | TAATGATTTAGAATAAAATT+CGG | - | chr6_1:83234012-83234031 | None:intergenic | 10.0% |
| !!! | AAAATGAGAAATATAAATTT+TGG | + | chr6_1:83236583-83236602 | Msa0895390:intron | 10.0% |
| !!! | AATGTTTAATTTTTGAGTTT+TGG | + | chr6_1:83232738-83232757 | Msa0895390:intron | 15.0% |
| !!! | ATGTTTAATTTTTGAGTTTT+GGG | + | chr6_1:83232739-83232758 | Msa0895390:intron | 15.0% |
| !!! | TAATGATTTAGAATAGAATT+CGG | + | chr6_1:83234082-83234101 | Msa0895390:intron | 15.0% |
| !! | AAAAAAAATTGTTATCAAAC+AGG | - | chr6_1:83234450-83234469 | None:intergenic | 15.0% |
| !! | TTTATTTGTGTTCAAAATTA+TGG | - | chr6_1:83234925-83234944 | None:intergenic | 15.0% |
| !! | ATGTATATTTGAACATAATT+TGG | + | chr6_1:83234988-83235007 | Msa0895390:intron | 15.0% |
| !! | CCAAAATAAAATGTAAATTT+CGG | + | chr6_1:83235775-83235794 | Msa0895390:intron | 15.0% |
| !! | GAATATATATAGAAGTAATA+AGG | - | chr6_1:83235867-83235886 | None:intergenic | 15.0% |
| !! | AATTTACTATATAAATGTCA+TGG | - | chr6_1:83236018-83236037 | None:intergenic | 15.0% |
| !!! | TTTTTTATTGTTGTGATATT+TGG | + | chr6_1:83236925-83236944 | Msa0895390:three_prime_UTR | 15.0% |
| !! | ATATTTCACCTATTATATAT+AGG | - | chr6_1:83236987-83237006 | None:intergenic | 15.0% |
| !!! | TTTTTGGATACTTTTCTTTT+GGG | - | chr6_1:83232327-83232346 | None:intergenic | 20.0% |
| !!! | TTTTTTGGATACTTTTCTTT+TGG | - | chr6_1:83232328-83232347 | None:intergenic | 20.0% |
| !! | AAATTCATCATTAAAGCAAA+AGG | + | chr6_1:83232393-83232412 | Msa0895390:five_prime_UTR | 20.0% |
| !!! | TTTTCTTCTTTTGTATTTGA+TGG | + | chr6_1:83232674-83232693 | Msa0895390:intron | 20.0% |
| !!! | TTTCTTCTTTTGTATTTGAT+GGG | + | chr6_1:83232675-83232694 | Msa0895390:intron | 20.0% |
| !! | TTATTTCGTATGAAATTTGA+TGG | + | chr6_1:83232704-83232723 | Msa0895390:intron | 20.0% |
| !! | TATTTCGTATGAAATTTGAT+GGG | + | chr6_1:83232705-83232724 | Msa0895390:intron | 20.0% |
| !!! | AATTTCTTGTTTTTCTGTAA+TGG | + | chr6_1:83232788-83232807 | Msa0895390:intron | 20.0% |
| !!! | ATTTCTTGTTTTTCTGTAAT+GGG | + | chr6_1:83232789-83232808 | Msa0895390:intron | 20.0% |
| !!! | ATTTTGAAAGTTTTTCAATC+TGG | + | chr6_1:83232957-83232976 | Msa0895390:intron | 20.0% |
| !!! | TTTTGAAAGTTTTTCAATCT+GGG | + | chr6_1:83232958-83232977 | Msa0895390:intron | 20.0% |
| !!! | TTTTAAGATTACTAGTTATC+TGG | + | chr6_1:83233065-83233084 | Msa0895390:intron | 20.0% |
| !!! | TTTAAGATTACTAGTTATCT+GGG | + | chr6_1:83233066-83233085 | Msa0895390:intron | 20.0% |
| !! | ATTGATATGATACATTATCT+TGG | + | chr6_1:83233701-83233720 | Msa0895390:intron | 20.0% |
| !! | TAAAAGAGTAAAATGACATA+AGG | - | chr6_1:83233864-83233883 | None:intergenic | 20.0% |
| !!! | TAGTATTGAATGATAGTTTT+AGG | + | chr6_1:83234129-83234148 | Msa0895390:intron | 20.0% |
| !!! | AGTATTGAATGATAGTTTTA+GGG | + | chr6_1:83234130-83234149 | Msa0895390:intron | 20.0% |
| !!! | TTTGAATCTTTTTTGAAACT+TGG | + | chr6_1:83234535-83234554 | Msa0895390:intron | 20.0% |
| !!! | TTGAATCTTTTTTGAAACTT+GGG | + | chr6_1:83234536-83234555 | Msa0895390:intron | 20.0% |
| !!! | ATATAGATCTTTTGATAAAG+TGG | - | chr6_1:83234669-83234688 | None:intergenic | 20.0% |
| !! | AAATTAGATAACACAAATTC+AGG | - | chr6_1:83234729-83234748 | None:intergenic | 20.0% |
| !! | AATTTCGACATCAATATAAA+TGG | + | chr6_1:83234780-83234799 | Msa0895390:intron | 20.0% |
| !! | GTTTATAACGTTCAAAATTA+TGG | - | chr6_1:83234903-83234922 | None:intergenic | 20.0% |
| !! | TTCAAATATACATGATTATC+AGG | - | chr6_1:83234981-83235000 | None:intergenic | 20.0% |
| !! | ATATTTGAACATAATTTGGA+TGG | + | chr6_1:83234992-83235011 | Msa0895390:intron | 20.0% |
| !! | ATTTAAACACTTGAAAATTG+TGG | + | chr6_1:83235032-83235051 | Msa0895390:intron | 20.0% |
| !!! | GAAAACTGTAAGTAATTTTA+CGG | + | chr6_1:83235440-83235459 | Msa0895390:intron | 20.0% |
| !!! | ATTAATGATTTGAAGTATAC+TGG | + | chr6_1:83235563-83235582 | Msa0895390:intron | 20.0% |
| !! | GAAAGTTACAAAATTAATAC+CGG | + | chr6_1:83235746-83235765 | Msa0895390:intron | 20.0% |
| !! | AAAGTTACAAAATTAATACC+GGG | + | chr6_1:83235747-83235766 | Msa0895390:intron | 20.0% |
| !!! | CCGAAATTTACATTTTATTT+TGG | - | chr6_1:83235778-83235797 | None:intergenic | 20.0% |
| !!! | GATTTTATCAAATTTCACTA+CGG | - | chr6_1:83236137-83236156 | None:intergenic | 20.0% |
| !!! | TATACTTCGAATTTTGTTTT+TGG | + | chr6_1:83236456-83236475 | Msa0895390:intron | 20.0% |
| !!! | CAAATTGCATGTTTTTTTTA+AGG | + | chr6_1:83236511-83236530 | Msa0895390:intron | 20.0% |
| !!! | ATGTTTTTTTTAAGGACATA+CGG | + | chr6_1:83236519-83236538 | Msa0895390:intron | 20.0% |
| !!! | TGAGAAATATAAATTTTGGA+TGG | + | chr6_1:83236587-83236606 | Msa0895390:intron | 20.0% |
| !! | TTTGTATCTAAATGAAAACA+TGG | + | chr6_1:83236658-83236677 | Msa0895390:intron | 20.0% |
| !! | TGATTTAGCCTATATATAAT+AGG | + | chr6_1:83236976-83236995 | Msa0895390:three_prime_UTR | 20.0% |
| ! | ATTTCTTCGTTATTATCGAT+CGG | - | chr6_1:83232428-83232447 | None:intergenic | 25.0% |
| ! | TAATTTCGTGTGAAAATTGA+TGG | + | chr6_1:83232818-83232837 | Msa0895390:intron | 25.0% |
| ! | AATTTCGTGTGAAAATTGAT+GGG | + | chr6_1:83232819-83232838 | Msa0895390:intron | 25.0% |
| !!! | ATCTTTGGTTTTTGAGTTTT+GGG | + | chr6_1:83232853-83232872 | Msa0895390:intron | 25.0% |
| !! | TGGAAATTGTTGAAGTTTTT+AGG | + | chr6_1:83232888-83232907 | Msa0895390:intron | 25.0% |
| !! | GGAAATTGTTGAAGTTTTTA+GGG | + | chr6_1:83232889-83232908 | Msa0895390:intron | 25.0% |
| !!! | GAAATTGTTGAAGTTTTTAG+GGG | + | chr6_1:83232890-83232909 | Msa0895390:intron | 25.0% |
| !!! | AAATTGTTGAAGTTTTTAGG+GGG | + | chr6_1:83232891-83232910 | Msa0895390:intron | 25.0% |
| !! | TAGGGTTGATTAATTTATCT+TGG | + | chr6_1:83232916-83232935 | Msa0895390:intron | 25.0% |
| ! | GATTAATTTATCTTGGTATG+TGG | + | chr6_1:83232923-83232942 | Msa0895390:intron | 25.0% |
| !! | TGATTCAATTGATAAGCTTT+TGG | + | chr6_1:83233039-83233058 | Msa0895390:intron | 25.0% |
| !! | GATTCAATTGATAAGCTTTT+GGG | + | chr6_1:83233040-83233059 | Msa0895390:intron | 25.0% |
| !! | ATTCAATTGATAAGCTTTTG+GGG | + | chr6_1:83233041-83233060 | Msa0895390:intron | 25.0% |
| ! | TTCAATGTAATCACATATGT+CGG | + | chr6_1:83233164-83233183 | Msa0895390:intron | 25.0% |
| !!! | ATTGATTTGATACAATACCT+TGG | - | chr6_1:83233638-83233657 | None:intergenic | 25.0% |
| ! | ATATGATACATTATCTTGGA+TGG | + | chr6_1:83233705-83233724 | Msa0895390:intron | 25.0% |
| !!! | ATTTTACTCTTTTAGCTTTG+AGG | + | chr6_1:83233870-83233889 | Msa0895390:intron | 25.0% |
| !!! | TTTTACTCTTTTAGCTTTGA+GGG | + | chr6_1:83233871-83233890 | Msa0895390:intron | 25.0% |
| !! | ATATTGATTGATTGCAAATG+AGG | - | chr6_1:83234177-83234196 | None:intergenic | 25.0% |
| ! | CTAAATCATTAGAATTCCTA+GGG | - | chr6_1:83234021-83234040 | None:intergenic | 25.0% |
| ! | TCTAAATCATTAGAATTCCT+AGG | - | chr6_1:83234020-83234039 | None:intergenic | 25.0% |
| !! | ATATTGATTGATTGCAAATG+AGG | + | chr6_1:83234177-83234196 | Msa0895390:intron | 25.0% |
| ! | TTTAGGGATGATTATTTATC+TGG | + | chr6_1:83234490-83234509 | Msa0895390:intron | 25.0% |
| ! | TTAGGGATGATTATTTATCT+GGG | + | chr6_1:83234491-83234510 | Msa0895390:intron | 25.0% |
| !! | CTAGATTCATAAGTTGAATA+GGG | + | chr6_1:83234576-83234595 | Msa0895390:intron | 25.0% |
| !!! | TATATCATAGAGTACTTTTG+TGG | + | chr6_1:83234686-83234705 | Msa0895390:intron | 25.0% |
| !!! | ATATCATAGAGTACTTTTGT+GGG | + | chr6_1:83234687-83234706 | Msa0895390:intron | 25.0% |
| ! | TAAAATGATGTTCAAAGTAG+TGG | + | chr6_1:83235056-83235075 | Msa0895390:intron | 25.0% |
| ! | TATATGGTTAATTACGTTCA+GGG | - | chr6_1:83235142-83235161 | None:intergenic | 25.0% |
| ! | ATATATGGTTAATTACGTTC+AGG | - | chr6_1:83235143-83235162 | None:intergenic | 25.0% |
| ! | GTTCAAGCAGTTTAAATATA+TGG | - | chr6_1:83235158-83235177 | None:intergenic | 25.0% |
| ! | TTGAAATCTCAAAATGACAA+TGG | - | chr6_1:83235229-83235248 | None:intergenic | 25.0% |
| ! | GTTTGTTTGTAGATATATAC+TGG | + | chr6_1:83235352-83235371 | Msa0895390:intron | 25.0% |
| !!! | AATAAATCTTCGAAAGCATT+TGG | + | chr6_1:83235623-83235642 | Msa0895390:intron | 25.0% |
| !!! | AATCTGGTGTTATTAAATAG+CGG | + | chr6_1:83236106-83236125 | Msa0895390:intron | 25.0% |
| ! | TTTGTAGAGACAAAAAAATG+AGG | - | chr6_1:83236488-83236507 | None:intergenic | 25.0% |
| ! | TTTAACCCTATAATGAATGT+TGG | + | chr6_1:83236622-83236641 | Msa0895390:intron | 25.0% |
| ! | CAATACCAACATTCATTATA+GGG | - | chr6_1:83236630-83236649 | None:intergenic | 25.0% |
| ! | ACAATACCAACATTCATTAT+AGG | - | chr6_1:83236631-83236650 | None:intergenic | 25.0% |
| !! | TCTCTTTTACATCAAAAGAT+AGG | - | chr6_1:83237036-83237055 | None:intergenic | 25.0% |
| ! | ATCCTCTTCATATAAAAAAG+TGG | + | chr6_1:83237063-83237082 | Msa0895390:three_prime_UTR | 25.0% |
| ! | GTAACAAAACATGTAAAAAG+TGG | - | chr6_1:83237098-83237117 | None:intergenic | 25.0% |
| !!! | TACATGTTTTGTTACTGTAT+AGG | + | chr6_1:83237103-83237122 | Msa0895390:three_prime_UTR | 25.0% |
| ! | TGGGCTAAGTTAAGTAATTT+TGG | - | chr6_1:83232308-83232327 | None:intergenic | 30.0% |
| !!! | ATTTTTGAGTTTTGGGTTTG+TGG | + | chr6_1:83232746-83232765 | Msa0895390:intron | 30.0% |
| !!! | TTTTTGAGTTTTGGGTTTGT+GGG | + | chr6_1:83232747-83232766 | Msa0895390:intron | 30.0% |
| !!! | CATCTTTGGTTTTTGAGTTT+TGG | + | chr6_1:83232852-83232871 | Msa0895390:intron | 30.0% |
| !!! | TTTTTGAGTTTTGGGTTTGT+GGG | + | chr6_1:83232747-83232766 | Msa0895390:intron | 30.0% |
| AATTTATCTTGGTATGTGGT+TGG | + | chr6_1:83232927-83232946 | Msa0895390:intron | 30.0% | |
| !!! | CTGGGATGGATTTTTTTTTT+TGG | + | chr6_1:83232976-83232995 | Msa0895390:intron | 30.0% |
| ! | TTCAATTGATAAGCTTTTGG+GGG | + | chr6_1:83233042-83233061 | Msa0895390:intron | 30.0% |
| ! | AAATTTGGGATGAATTGTGT+TGG | + | chr6_1:83233289-83233308 | Msa0895390:intron | 30.0% |
| CTAGATTCAGAAGTTGAATA+GGG | + | chr6_1:83233315-83233334 | Msa0895390:intron | 30.0% | |
| TGAGAAGATCCATATATCAT+AGG | + | chr6_1:83233400-83233419 | Msa0895390:intron | 30.0% | |
| GAGAAGATCCATATATCATA+GGG | + | chr6_1:83233401-83233420 | Msa0895390:intron | 30.0% | |
| !! | CAAAAGTACCCTATGATATA+TGG | - | chr6_1:83233412-83233431 | None:intergenic | 30.0% |
| !! | TATATCATAGGGTACTTTTG+TGG | + | chr6_1:83233412-83233431 | Msa0895390:intron | 30.0% |
| !! | ATATCATAGGGTACTTTTGT+GGG | + | chr6_1:83233413-83233432 | Msa0895390:intron | 30.0% |
| !!! | TAAGCTTTTTTTGACAGATG+AGG | - | chr6_1:83233455-83233474 | None:intergenic | 30.0% |
| TTGGAATTTGAAAACGACAA+CGG | + | chr6_1:83233513-83233532 | Msa0895390:intron | 30.0% | |
| TTGAGGGTTGTATTTAAACT+TGG | - | chr6_1:83233887-83233906 | None:intergenic | 30.0% | |
| AAGTTTAAATACAACCCTCA+AGG | + | chr6_1:83234209-83234228 | Msa0895390:intron | 30.0% | |
| TAAAAGAGTAAACTGACGTA+AGG | + | chr6_1:83234233-83234252 | Msa0895390:intron | 30.0% | |
| !! | TAGCGTTGAAATTTTGACAA+CGG | - | chr6_1:83234338-83234357 | None:intergenic | 30.0% |
| CTTTCCAAATAGAATCTAAG+TGG | - | chr6_1:83234367-83234386 | None:intergenic | 30.0% | |
| CACTTAGATTCTATTTGGAA+AGG | + | chr6_1:83234365-83234384 | Msa0895390:intron | 30.0% | |
| ! | GTTATCAAACAGGTCTATTT+TGG | - | chr6_1:83234440-83234459 | None:intergenic | 30.0% |
| !!! | AATTTTTTTTCACCAGCTTG+TGG | + | chr6_1:83234460-83234479 | Msa0895390:intron | 30.0% |
| TGATTATTTATCTGGGTATG+TGG | + | chr6_1:83234498-83234517 | Msa0895390:intron | 30.0% | |
| ! | GCTAGATTCATAAGTTGAAT+AGG | + | chr6_1:83234575-83234594 | Msa0895390:intron | 30.0% |
| ! | GTTTCTGTTTGTTGATTGTT+TGG | + | chr6_1:83234636-83234655 | Msa0895390:intron | 30.0% |
| ATATGGTTAATTACGTTCAG+GGG | - | chr6_1:83235141-83235160 | None:intergenic | 30.0% | |
| ! | TAAGTTGAAGTTGAAAAACG+TGG | - | chr6_1:83235269-83235288 | None:intergenic | 30.0% |
| GTTTGTAGATATATACTGGA+AGG | + | chr6_1:83235356-83235375 | Msa0895390:intron | 30.0% | |
| CAAATCATTAATCCAAGCTA+TGG | - | chr6_1:83235555-83235574 | None:intergenic | 30.0% | |
| !! | TCGAAAGCATTTGGTAATAA+AGG | + | chr6_1:83235632-83235651 | Msa0895390:intron | 30.0% |
| ! | ACATTCTTTGCATGTTTCTA+AGG | + | chr6_1:83235672-83235691 | Msa0895390:intron | 30.0% |
| ! | GTTTCATGCACTTTTATGAT+TGG | + | chr6_1:83235724-83235743 | Msa0895390:intron | 30.0% |
| !!! | CATTTTATTTTGGTTCTTCC+CGG | - | chr6_1:83235768-83235787 | None:intergenic | 30.0% |
| AACAGTTAAACTTATGTGCA+GGG | - | chr6_1:83235816-83235835 | None:intergenic | 30.0% | |
| TAACAGTTAAACTTATGTGC+AGG | - | chr6_1:83235817-83235836 | None:intergenic | 30.0% | |
| TAGAAGTAATAAGGACATGA+AGG | - | chr6_1:83235858-83235877 | None:intergenic | 30.0% | |
| TGCATATCACAGAAAATAGT+GGG | - | chr6_1:83236254-83236273 | None:intergenic | 30.0% | |
| TTGCATATCACAGAAAATAG+TGG | - | chr6_1:83236255-83236274 | None:intergenic | 30.0% | |
| ! | AGTTTCACATTTTATGATCG+AGG | - | chr6_1:83236290-83236309 | None:intergenic | 30.0% |
| GATCATAAAATGTGAAACTC+TGG | + | chr6_1:83236291-83236310 | Msa0895390:intron | 30.0% | |
| ATTCACTTTACCAATAGAGT+AGG | - | chr6_1:83236404-83236423 | None:intergenic | 30.0% | |
| ! | AGTGAATTTCTGTGTCTTTT+TGG | + | chr6_1:83236417-83236436 | Msa0895390:intron | 30.0% |
| ! | TTAGTAAAAGAGAGCTTTTG+AGG | + | chr6_1:83236803-83236822 | Msa0895390:three_prime_UTR | 30.0% |
| ! | TAGTAAAAGAGAGCTTTTGA+GGG | + | chr6_1:83236804-83236823 | Msa0895390:three_prime_UTR | 30.0% |
| !!! | CTCCACTTTTTTATATGAAG+AGG | - | chr6_1:83237068-83237087 | None:intergenic | 30.0% |
| GTGAAATCAGAGAAGTCAAA+CGG | - | chr6_1:83232593-83232612 | None:intergenic | 35.0% | |
| ! | TTTTCATTGTTCCCTTTGCT+GGG | + | chr6_1:83232631-83232650 | Msa0895390:CDS | 35.0% |
| !! | TGTGAAAATTGATGGGTTTG+TGG | + | chr6_1:83232826-83232845 | Msa0895390:intron | 35.0% |
| !!! | GTTTTTGAGTTTTGGGTTTG+TGG | + | chr6_1:83232860-83232879 | Msa0895390:intron | 35.0% |
| !! | TTGAAGTTTTTAGGGGGTTT+AGG | + | chr6_1:83232897-83232916 | Msa0895390:intron | 35.0% |
| !! | TGAAGTTTTTAGGGGGTTTA+GGG | + | chr6_1:83232898-83232917 | Msa0895390:intron | 35.0% |
| !! | GAAAGTTTTTCAATCTGGGA+TGG | + | chr6_1:83232962-83232981 | Msa0895390:intron | 35.0% |
| !! | TGCTAGATTCACTTTTGAGT+TGG | + | chr6_1:83233000-83233019 | Msa0895390:intron | 35.0% |
| !!! | TAGATTCACTTTTGAGTTGG+TGG | + | chr6_1:83233003-83233022 | Msa0895390:intron | 35.0% |
| !!! | AGATTCACTTTTGAGTTGGT+GGG | + | chr6_1:83233004-83233023 | Msa0895390:intron | 35.0% |
| GCTAGATTCAGAAGTTGAAT+AGG | + | chr6_1:83233314-83233333 | Msa0895390:intron | 35.0% | |
| ! | GCTTAAGTTGCAGTTGAAAA+AGG | + | chr6_1:83233470-83233489 | Msa0895390:intron | 35.0% |
| TAAGTTGCAGTTGAAAAAGG+AGG | + | chr6_1:83233473-83233492 | Msa0895390:intron | 35.0% | |
| AGACACAAAGAAACAAGATC+AGG | + | chr6_1:83233735-83233754 | Msa0895390:intron | 35.0% | |
| GACACAAAGAAACAAGATCA+GGG | + | chr6_1:83233736-83233755 | Msa0895390:intron | 35.0% | |
| TTTATTCCTGTAACAGAGGA+AGG | - | chr6_1:83233806-83233825 | None:intergenic | 35.0% | |
| ACAGTTTATTCCTGTAACAG+AGG | - | chr6_1:83233810-83233829 | None:intergenic | 35.0% | |
| AAAATCCAAGTCTCAAGTGT+AGG | - | chr6_1:83234040-83234059 | None:intergenic | 35.0% | |
| !!! | GTTTACTCTTTTAGCCTTGA+GGG | - | chr6_1:83234226-83234245 | None:intergenic | 35.0% |
| !!! | AGTTTACTCTTTTAGCCTTG+AGG | - | chr6_1:83234227-83234246 | None:intergenic | 35.0% |
| TCCACCACTTAGATTCTATT+TGG | + | chr6_1:83234360-83234379 | Msa0895390:intron | 35.0% | |
| TCCAAATAGAATCTAAGTGG+TGG | - | chr6_1:83234364-83234383 | None:intergenic | 35.0% | |
| AAACTTGGGATGAATTGTGT+TGG | + | chr6_1:83234550-83234569 | Msa0895390:intron | 35.0% | |
| ! | TAAGTTGAATAGGGCTTAAG+AGG | + | chr6_1:83234585-83234604 | Msa0895390:intron | 35.0% |
| AAGTTGAATAGGGCTTAAGA+GGG | + | chr6_1:83234586-83234605 | Msa0895390:intron | 35.0% | |
| ! | CTGTTTGTTGATTGTTTGGT+AGG | + | chr6_1:83234640-83234659 | Msa0895390:intron | 35.0% |
| GTTAATGCAGTCCAAATATG+TGG | + | chr6_1:83234802-83234821 | Msa0895390:intron | 35.0% | |
| GAACACAATAGCCACATATT+TGG | - | chr6_1:83234816-83234835 | None:intergenic | 35.0% | |
| ! | AAGTAGTGGTTAGTTGTGTT+CGG | + | chr6_1:83235070-83235089 | Msa0895390:intron | 35.0% |
| !! | GATGGTTGATGACTATCAAA+AGG | - | chr6_1:83235119-83235138 | None:intergenic | 35.0% |
| AATGGAAAATGAGTCGAGTT+GGG | - | chr6_1:83235211-83235230 | None:intergenic | 35.0% | |
| ! | GCATGTTTCTAAGGATTTGT+TGG | + | chr6_1:83235681-83235700 | Msa0895390:intron | 35.0% |
| ATCTTCATCTCCTTATTGCT+TGG | + | chr6_1:83235903-83235922 | Msa0895390:intron | 35.0% | |
| !! | GTTTGTTGTTGACTTCAATC+TGG | + | chr6_1:83236090-83236109 | Msa0895390:intron | 35.0% |
| TTGTACTAGATAGCGTATCA+CGG | - | chr6_1:83236169-83236188 | None:intergenic | 35.0% | |
| ATGTCTGAGCAGGAAAAAAA+TGG | - | chr6_1:83236341-83236360 | None:intergenic | 35.0% | |
| TTTAAGGACATACGGTATTG+TGG | + | chr6_1:83236527-83236546 | Msa0895390:intron | 35.0% | |
| ! | ATACGGTATTGTGGTTTGTA+GGG | + | chr6_1:83236536-83236555 | Msa0895390:intron | 35.0% |
| TCTAAATGAAAACATGGACG+TGG | + | chr6_1:83236664-83236683 | Msa0895390:intron | 35.0% | |
| !! | TGAGGGATCTTTAGTTTGTA+CGG | + | chr6_1:83236821-83236840 | Msa0895390:three_prime_UTR | 35.0% |
| ATGTACCAAACCTTGAACTA+TGG | + | chr6_1:83236864-83236883 | Msa0895390:three_prime_UTR | 35.0% | |
| !! | GATGTGAGTGAGACTGATTT+TGG | - | chr6_1:83232370-83232389 | None:intergenic | 40.0% |
| !!! | GCGATTTTTTCCATAAGCGA+TGG | + | chr6_1:83232476-83232495 | Msa0895390:exon | 40.0% |
| ! | CTTTTCATTGTTCCCTTTGC+TGG | + | chr6_1:83232630-83232649 | Msa0895390:CDS | 40.0% |
| TGGGTTTGTGGAAACATCTT+TGG | + | chr6_1:83232838-83232857 | Msa0895390:intron | 40.0% | |
| TTACTAGTTATCTGGGTGTC+TGG | + | chr6_1:83233073-83233092 | Msa0895390:intron | 40.0% | |
| !! | TCACATATGTCGGTGTCAAA+CGG | + | chr6_1:83233174-83233193 | Msa0895390:intron | 40.0% |
| ! | TTTGGGATGAATTGTGTTGG+TGG | + | chr6_1:83233292-83233311 | Msa0895390:intron | 40.0% |
| TCAGAAGTTGAATAGGGCTT+AGG | + | chr6_1:83233321-83233340 | Msa0895390:intron | 40.0% | |
| AAGTTGAATAGGGCTTAGGA+GGG | + | chr6_1:83233325-83233344 | Msa0895390:intron | 40.0% | |
| !! | GGTGGTGTTACAATTAGTGT+TGG | + | chr6_1:83233494-83233513 | Msa0895390:intron | 40.0% |
| GAAAAGTTGGATAGGCAGAA+CGG | + | chr6_1:83233537-83233556 | Msa0895390:intron | 40.0% | |
| ACGGAAGATTGTGAAATGCA+TGG | + | chr6_1:83233556-83233575 | Msa0895390:intron | 40.0% | |
| CGGAAGATTGTGAAATGCAT+GGG | + | chr6_1:83233557-83233576 | Msa0895390:intron | 40.0% | |
| CAGAGAGAAACAAAGATCAG+TGG | - | chr6_1:83233608-83233627 | None:intergenic | 40.0% | |
| TTTCTCTCTGTCTTCATCCA+AGG | + | chr6_1:83233618-83233637 | Msa0895390:intron | 40.0% | |
| ACATTATCTTGGATGGAGAG+TGG | + | chr6_1:83233712-83233731 | Msa0895390:intron | 40.0% | |
| TTGATTGCAAATGAGGCACA+AGG | - | chr6_1:83234184-83234203 | None:intergenic | 40.0% | |
| GAATTCCTACACTTGAGACT+TGG | + | chr6_1:83234032-83234051 | Msa0895390:intron | 40.0% | |
| ! | GATTTTATCGTTTCGTCCCT+AGG | + | chr6_1:83234054-83234073 | Msa0895390:intron | 40.0% |
| TTGATTGCAAATGAGGCACA+AGG | + | chr6_1:83234184-83234203 | Msa0895390:intron | 40.0% | |
| !! | TGAAATTTTGACAACGGCAG+CGG | - | chr6_1:83234332-83234351 | None:intergenic | 40.0% |
| ! | ATCCGCTACAAGCTAGATTT+TGG | - | chr6_1:83234391-83234410 | None:intergenic | 40.0% |
| ! | AAAATCTAGCTTGTAGCGGA+TGG | + | chr6_1:83234390-83234409 | Msa0895390:intron | 40.0% |
| !!! | TTTTTTTCACCAGCTTGTGG+TGG | + | chr6_1:83234463-83234482 | Msa0895390:intron | 40.0% |
| !! | AGCTTGTGGTGGATAGTTTA+GGG | + | chr6_1:83234474-83234493 | Msa0895390:intron | 40.0% |
| ! | AGTACTTTTGTGGGATCTAC+TGG | + | chr6_1:83234696-83234715 | Msa0895390:intron | 40.0% |
| TATGTGGCTATTGTGTTCAG+TGG | + | chr6_1:83234818-83234837 | Msa0895390:intron | 40.0% | |
| CAATGGAAAATGAGTCGAGT+TGG | - | chr6_1:83235212-83235231 | None:intergenic | 40.0% | |
| GTTGAAGTTGAAAAACGTGG+TGG | - | chr6_1:83235266-83235285 | None:intergenic | 40.0% | |
| GATGATGAAAGACCATAGCT+TGG | + | chr6_1:83235540-83235559 | Msa0895390:intron | 40.0% | |
| TACCATCAAGCCAAGCAATA+AGG | - | chr6_1:83235916-83235935 | None:intergenic | 40.0% | |
| ! | GTGTTGGTGTGTGTATAACT+CGG | - | chr6_1:83235962-83235981 | None:intergenic | 40.0% |
| TGTACTAGATAGCGTATCAC+GGG | - | chr6_1:83236168-83236187 | None:intergenic | 40.0% | |
| ! | CATACGGTATTGTGGTTTGT+AGG | + | chr6_1:83236535-83236554 | Msa0895390:intron | 40.0% |
| !! | CCTTCTGGAACTTGCAAATA+CGG | - | chr6_1:83236705-83236724 | None:intergenic | 40.0% |
| ! | CCATGCTTTGAATATCCTTC+TGG | - | chr6_1:83236720-83236739 | None:intergenic | 40.0% |
| CCAGAAGGATATTCAAAGCA+TGG | + | chr6_1:83236717-83236736 | Msa0895390:CDS | 40.0% | |
| GAAGGATATTCAAAGCATGG+AGG | + | chr6_1:83236720-83236739 | Msa0895390:CDS | 40.0% | |
| TGGTACATCATACATCACAG+TGG | - | chr6_1:83236852-83236871 | None:intergenic | 40.0% | |
| ! | CACTCAGCTCTGTATTTTCA+TGG | + | chr6_1:83236896-83236915 | Msa0895390:three_prime_UTR | 40.0% |
| GTGGATGATACTCACCTATG+TGG | + | chr6_1:83232506-83232525 | Msa0895390:CDS | 45.0% | |
| GATGATACTCACCTATGTGG+TGG | + | chr6_1:83232509-83232528 | Msa0895390:CDS | 45.0% | |
| AGCTTCAATAGCCACCACAT+AGG | - | chr6_1:83232523-83232542 | None:intergenic | 45.0% | |
| TTCCATCACCAAAGCTGTTG+AGG | + | chr6_1:83232565-83232584 | Msa0895390:CDS | 45.0% | |
| ! | TTCCTCAACAGCTTTGGTGA+TGG | - | chr6_1:83232570-83232589 | None:intergenic | 45.0% |
| AAACGGTTCCTCAACAGCTT+TGG | - | chr6_1:83232576-83232595 | None:intergenic | 45.0% | |
| ! | AAGGGAACAATGAAAAGCGC+AGG | - | chr6_1:83232627-83232646 | None:intergenic | 45.0% |
| AGAAGCTGAAACCCAGCAAA+GGG | - | chr6_1:83232645-83232664 | None:intergenic | 45.0% | |
| AAGAAGCTGAAACCCAGCAA+AGG | - | chr6_1:83232646-83232665 | None:intergenic | 45.0% | |
| TTTGCTGGGTTTCAGCTTCT+TGG | + | chr6_1:83232645-83232664 | Msa0895390:CDS | 45.0% | |
| !!! | TGAGTTTTGGGTTTGTGGGT+TGG | + | chr6_1:83232751-83232770 | Msa0895390:intron | 45.0% |
| ! | TCTTGGTATGTGGTTGGTTG+TGG | + | chr6_1:83232933-83232952 | Msa0895390:intron | 45.0% |
| ! | CTTCGGATGAAAGGCATGTA+AGG | - | chr6_1:83233216-83233235 | None:intergenic | 45.0% |
| ACACTGACACTTCGGATGAA+AGG | - | chr6_1:83233225-83233244 | None:intergenic | 45.0% | |
| CCTCTGTAACACTGACACTT+CGG | - | chr6_1:83233233-83233252 | None:intergenic | 45.0% | |
| GAAGTTGAATAGGGCTTAGG+AGG | + | chr6_1:83233324-83233343 | Msa0895390:intron | 45.0% | |
| ! | GGTACTTTTGTGGGATCTAC+TGG | + | chr6_1:83233422-83233441 | Msa0895390:intron | 45.0% |
| ! | ACTTTTGTGGGATCTACTGG+TGG | + | chr6_1:83233425-83233444 | Msa0895390:intron | 45.0% |
| GTTGCAGTTGAAAAAGGAGG+TGG | + | chr6_1:83233476-83233495 | Msa0895390:intron | 45.0% | |
| AAACGACAACGGCGAAAAGT+TGG | + | chr6_1:83233524-83233543 | Msa0895390:intron | 45.0% | |
| ACAACGGCGAAAAGTTGGAT+AGG | + | chr6_1:83233529-83233548 | Msa0895390:intron | 45.0% | |
| AGTGGCAGTTGAAAGAACAG+TGG | - | chr6_1:83233590-83233609 | None:intergenic | 45.0% | |
| ACAAGATCAGGGACACTTGA+AGG | + | chr6_1:83233747-83233766 | Msa0895390:intron | 45.0% | |
| AAGGTTGTGAAACACGTTGG+GGG | - | chr6_1:83233787-83233806 | None:intergenic | 45.0% | |
| GAAGGTTGTGAAACACGTTG+GGG | - | chr6_1:83233788-83233807 | None:intergenic | 45.0% | |
| GGAAGGTTGTGAAACACGTT+GGG | - | chr6_1:83233789-83233808 | None:intergenic | 45.0% | |
| AGGAAGGTTGTGAAACACGT+TGG | - | chr6_1:83233790-83233809 | None:intergenic | 45.0% | |
| TCACAACCTTCCTCTGTTAC+AGG | + | chr6_1:83233797-83233816 | Msa0895390:intron | 45.0% | |
| AACATCCTCTCTGCTTGAAC+CGG | + | chr6_1:83234302-83234321 | Msa0895390:intron | 45.0% | |
| !! | AAATTTTGACAACGGCAGCG+GGG | - | chr6_1:83234330-83234349 | None:intergenic | 45.0% |
| !! | GAAATTTTGACAACGGCAGC+GGG | - | chr6_1:83234331-83234350 | None:intergenic | 45.0% |
| ! | GGCCAAAATCTAGCTTGTAG+CGG | + | chr6_1:83234386-83234405 | Msa0895390:intron | 45.0% |
| CTAAACTATCCACCACAAGC+TGG | - | chr6_1:83234475-83234494 | None:intergenic | 45.0% | |
| !! | CAGCTTGTGGTGGATAGTTT+AGG | + | chr6_1:83234473-83234492 | Msa0895390:intron | 45.0% |
| CTTGGGATGAATTGTGTTGG+TGG | + | chr6_1:83234553-83234572 | Msa0895390:intron | 45.0% | |
| TGGCTATTGTGTTCAGTGGA+TGG | + | chr6_1:83234822-83234841 | Msa0895390:intron | 45.0% | |
| GGCTATTGTGTTCAGTGGAT+GGG | + | chr6_1:83234823-83234842 | Msa0895390:intron | 45.0% | |
| ! | TAGTGGTTAGTTGTGTTCGG+TGG | + | chr6_1:83235073-83235092 | Msa0895390:intron | 45.0% |
| GGTTAATTACGTTCAGGGGA+TGG | - | chr6_1:83235137-83235156 | None:intergenic | 45.0% | |
| TATACTGGAAGGCTGAGCAT+AGG | + | chr6_1:83235367-83235386 | Msa0895390:CDS | 45.0% | |
| AGCAGCAGTACAAACATCAG+AGG | - | chr6_1:83235403-83235422 | None:intergenic | 45.0% | |
| TAAATTTCGGCCATCATCGC+AGG | + | chr6_1:83235788-83235807 | Msa0895390:intron | 45.0% | |
| ! | CTCCTTATTGCTTGGCTTGA+TGG | + | chr6_1:83235911-83235930 | Msa0895390:intron | 45.0% |
| GCTATAGCATTGCTGTGTAG+CGG | + | chr6_1:83236217-83236236 | Msa0895390:intron | 45.0% | |
| ! | TGAGCTTTGTATGTCTGAGC+AGG | - | chr6_1:83236351-83236370 | None:intergenic | 45.0% |
| TTGCAGCATGCCTACTCTAT+TGG | + | chr6_1:83236391-83236410 | Msa0895390:intron | 45.0% | |
| ! | TAGTCTCTGTGCGCACTTTT+AGG | - | chr6_1:83236563-83236582 | None:intergenic | 45.0% |
| AAAACATGGACGTGGTGACA+GGG | + | chr6_1:83236672-83236691 | Msa0895390:intron | 45.0% | |
| CCGTATTTGCAAGTTCCAGA+AGG | + | chr6_1:83236702-83236721 | Msa0895390:CDS | 45.0% | |
| GTGTGCCATAGTTCAAGGTT+TGG | - | chr6_1:83236872-83236891 | None:intergenic | 45.0% | |
| GATGAGTGTGCCATAGTTCA+AGG | - | chr6_1:83236877-83236896 | None:intergenic | 45.0% | |
| CACTGCAATGCCATCGCTTA+TGG | - | chr6_1:83232489-83232508 | None:intergenic | 50.0% | |
| CATAAGCGATGGCATTGCAG+TGG | + | chr6_1:83232487-83232506 | Msa0895390:exon | 50.0% | |
| !!! | GAGTTTTGGGTTTGTGGGTG+TGG | + | chr6_1:83232752-83232771 | Msa0895390:intron | 50.0% |
| !!! | GTTTTGGGTTTGTGGGTTGG+TGG | + | chr6_1:83232868-83232887 | Msa0895390:intron | 50.0% |
| ! | TGAAAGGCATGTAAGGTGCC+TGG | - | chr6_1:83233209-83233228 | None:intergenic | 50.0% |
| ! | CCGAAGTGTCAGTGTTACAG+AGG | + | chr6_1:83233230-83233249 | Msa0895390:intron | 50.0% |
| ! | GTCAGTGTTACAGAGGTGTG+TGG | + | chr6_1:83233237-83233256 | Msa0895390:intron | 50.0% |
| ! | GTGTTACAGAGGTGTGTGGT+TGG | + | chr6_1:83233241-83233260 | Msa0895390:intron | 50.0% |
| AGGTTGTGAAACACGTTGGG+GGG | - | chr6_1:83233786-83233805 | None:intergenic | 50.0% | |
| !! | ATGAGTCGAGTTGGGTGGAA+AGG | - | chr6_1:83235203-83235222 | None:intergenic | 50.0% |
| !! | GGAAAATGAGTCGAGTTGGG+TGG | - | chr6_1:83235208-83235227 | None:intergenic | 50.0% |
| !! | CTCGGCATCTCTTGCTTTTG+AGG | - | chr6_1:83235944-83235963 | None:intergenic | 50.0% |
| GTGTGTGTGTGTGTGTGTGT+TGG | - | chr6_1:83235978-83235997 | None:intergenic | 50.0% | |
| GAAAACATGGACGTGGTGAC+AGG | + | chr6_1:83236671-83236690 | Msa0895390:intron | 50.0% | |
| GTCAAACGGTGACACATGCC+AGG | + | chr6_1:83233188-83233207 | Msa0895390:intron | 55.0% | |
| ! | CAGAGGTGTGTGGTTGGTTG+TGG | + | chr6_1:83233247-83233266 | Msa0895390:intron | 55.0% |
| GTTGGGTGGAAAGGAAGGCT+GGG | - | chr6_1:83235194-83235213 | None:intergenic | 55.0% | |
| AGTTGGGTGGAAAGGAAGGC+TGG | - | chr6_1:83235195-83235214 | None:intergenic | 55.0% | |
| !! | GTCGAGTTGGGTGGAAAGGA+AGG | - | chr6_1:83235199-83235218 | None:intergenic | 55.0% |
| ! | GGGAACCGGTTCAAGCAGAG+AGG | - | chr6_1:83234310-83234329 | None:intergenic | 60.0% |
| GTGCAGGGTTCCTGCGATGA+TGG | - | chr6_1:83235801-83235820 | None:intergenic | 60.0% | |
| TGACAACGGCAGCGGGGAAC+CGG | - | chr6_1:83234324-83234343 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_1 | gene | 83232295 | 83237165 | 83232295 | ID=Msa0895390;Name=Msa0895390 |
| chr6_1 | mRNA | 83232295 | 83237165 | 83232295 | ID=Msa0895390-mRNA-1;Parent=Msa0895390;Name=Msa0895390-mRNA-1;_AED=0.07;_eAED=0.07;_QI=200|0.5|1|1|1|1|3|416|103 |
| chr6_1 | exon | 83232295 | 83232666 | 83232295 | ID=Msa0895390-mRNA-1:exon:14016;Parent=Msa0895390-mRNA-1 |
| chr6_1 | exon | 83235364 | 83235446 | 83235364 | ID=Msa0895390-mRNA-1:exon:14017;Parent=Msa0895390-mRNA-1 |
| chr6_1 | exon | 83236693 | 83237165 | 83236693 | ID=Msa0895390-mRNA-1:exon:14018;Parent=Msa0895390-mRNA-1 |
| chr6_1 | five_prime_UTR | 83232295 | 83232494 | 83232295 | ID=Msa0895390-mRNA-1:five_prime_utr;Parent=Msa0895390-mRNA-1 |
| chr6_1 | CDS | 83232495 | 83232666 | 83232495 | ID=Msa0895390-mRNA-1:cds;Parent=Msa0895390-mRNA-1 |
| chr6_1 | CDS | 83235364 | 83235446 | 83235364 | ID=Msa0895390-mRNA-1:cds;Parent=Msa0895390-mRNA-1 |
| chr6_1 | CDS | 83236693 | 83236749 | 83236693 | ID=Msa0895390-mRNA-1:cds;Parent=Msa0895390-mRNA-1 |
| chr6_1 | three_prime_UTR | 83236750 | 83237165 | 83236750 | ID=Msa0895390-mRNA-1:three_prime_utr;Parent=Msa0895390-mRNA-1 |
| Gene Sequence |
| Protein sequence |
