Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0302940 | XP_003597497.1 | 93.958 | 331 | 16 | 2 | 1 | 329 | 1 | 329 | 0.0 | 613 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0302940 | sp|B9DFZ0|NTH2_ARATH | 69.130 | 230 | 67 | 1 | 87 | 312 | 141 | 370 | 8.12e-117 | 345 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003470 | Msa0302940 | 0.811242 | 7.720724e-51 | -8.615850e-47 |
| Msa0030000 | Msa0302940 | 0.822381 | 2.442511e-53 | -8.615850e-47 |
| Msa0094420 | Msa0302940 | 0.808406 | 3.145667e-50 | -8.615850e-47 |
| Msa0125230 | Msa0302940 | 0.813207 | 2.876795e-51 | -8.615850e-47 |
| Msa0146470 | Msa0302940 | 0.803497 | 3.388717e-49 | -8.615850e-47 |
| Msa0194570 | Msa0302940 | 0.806757 | 7.045358e-50 | -8.615850e-47 |
| Msa0207000 | Msa0302940 | 0.808722 | 2.694005e-50 | -8.615850e-47 |
| Msa0217470 | Msa0302940 | 0.801806 | 7.567509e-49 | -8.615850e-47 |
| Msa0227490 | Msa0302940 | 0.805336 | 1.402144e-49 | -8.615850e-47 |
| Msa0227500 | Msa0302940 | 0.816269 | 6.032754e-52 | -8.615850e-47 |
| Msa0281570 | Msa0302940 | 0.803881 | 2.820831e-49 | -8.615850e-47 |
| Msa0301180 | Msa0302940 | 0.812549 | 4.008232e-51 | -8.615850e-47 |
| Msa0302940 | Msa0320540 | 0.815112 | 1.092214e-51 | -8.615850e-47 |
| Msa0302940 | Msa0344070 | 0.805958 | 1.037996e-49 | -8.615850e-47 |
| Msa0302940 | Msa0371610 | 0.801338 | 9.436893e-49 | -8.615850e-47 |
| Msa0302940 | Msa0420070 | 0.807708 | 4.429557e-50 | -8.615850e-47 |
| Msa0302940 | Msa0466100 | 0.812614 | 3.879289e-51 | -8.615850e-47 |
| Msa0302940 | Msa0524090 | 0.810975 | 8.822951e-51 | -8.615850e-47 |
| Msa0302940 | Msa0524120 | 0.821846 | 3.250096e-53 | -8.615850e-47 |
| Msa0302940 | Msa0546380 | 0.809608 | 1.739642e-50 | -8.615850e-47 |
| Msa0302940 | Msa0576420 | 0.802949 | 4.400134e-49 | -8.615850e-47 |
| Msa0302940 | Msa0582110 | 0.803663 | 3.130284e-49 | -8.615850e-47 |
| Msa0302940 | Msa0621890 | 0.803309 | 3.707481e-49 | -8.615850e-47 |
| Msa0302940 | Msa0642650 | 0.802553 | 5.311654e-49 | -8.615850e-47 |
| Msa0302940 | Msa0647000 | 0.801262 | 9.781482e-49 | -8.615850e-47 |
| Msa0302940 | Msa0681890 | 0.810920 | 9.067420e-51 | -8.615850e-47 |
| Msa0302940 | Msa0686610 | 0.805501 | 1.294749e-49 | -8.615850e-47 |
| Msa0302940 | Msa0707780 | 0.810188 | 1.305236e-50 | -8.615850e-47 |
| Msa0302940 | Msa0730180 | 0.824284 | 8.774824e-54 | -8.615850e-47 |
| Msa0302940 | Msa0770430 | 0.806789 | 6.936055e-50 | -8.615850e-47 |
| Msa0302940 | Msa0792510 | 0.801693 | 7.984085e-49 | -8.615850e-47 |
| Msa0302940 | Msa0842050 | 0.809025 | 2.319829e-50 | -8.615850e-47 |
| Msa0302940 | Msa0907700 | 0.813302 | 2.742021e-51 | -8.615850e-47 |
| Msa0302940 | Msa0925160 | 0.812379 | 4.367048e-51 | -8.615850e-47 |
| Msa0302940 | Msa0930330 | 0.818371 | 2.029773e-52 | -8.615850e-47 |
| Msa0302940 | Msa0955260 | 0.805679 | 1.188178e-49 | -8.615850e-47 |
| Msa0302940 | Msa1125780 | 0.802741 | 4.857260e-49 | -8.615850e-47 |
| Msa0302940 | Msa1129720 | 0.804288 | 2.320936e-49 | -8.615850e-47 |
| Msa0302940 | Msa1149760 | 0.814766 | 1.303431e-51 | -8.615850e-47 |
| Msa0302940 | Msa1171340 | 0.805772 | 1.136034e-49 | -8.615850e-47 |
| Msa0302940 | Msa1200920 | 0.819313 | 1.240372e-52 | -8.615850e-47 |
| Msa0302940 | Msa1220230 | 0.804190 | 2.433101e-49 | -8.615850e-47 |
| Msa0302940 | Msa1220450 | -0.801482 | 8.819236e-49 | -8.615850e-47 |
| Msa0302940 | Msa1221200 | -0.820742 | 5.839646e-53 | -8.615850e-47 |
| Msa0302940 | Msa1226600 | 0.814584 | 1.430021e-51 | -8.615850e-47 |
| Msa0302940 | Msa1263660 | 0.816686 | 4.864765e-52 | -8.615850e-47 |
| Msa0302940 | Msa1284030 | 0.803775 | 2.967954e-49 | -8.615850e-47 |
| Msa0302940 | Msa1302150 | 0.803305 | 3.713440e-49 | -8.615850e-47 |
| Msa0302940 | Msa1323060 | 0.831387 | 1.718578e-55 | -8.615850e-47 |
| Msa0302940 | Msa1352290 | 0.807008 | 6.234100e-50 | -8.615850e-47 |
| Msa0302940 | Msa1354040 | 0.811159 | 8.049674e-51 | -8.615850e-47 |
| Msa0302940 | Msa1358870 | -0.814024 | 1.901580e-51 | -8.615850e-47 |
| Msa0302940 | Msa1385900 | 0.815878 | 7.377838e-52 | -8.615850e-47 |
| Msa0302940 | Msa1428420 | 0.809734 | 1.634717e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0302940 | MtrunA17_Chr2g0329271 | 93.958 | 331 | 16 | 2 | 1 | 329 | 1 | 329 | 0.0 | 613 |
| Msa0302940 | MtrunA17_Chr4g0033431 | 56.283 | 382 | 110 | 8 | 1 | 327 | 27 | 406 | 3.02e-133 | 385 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0302940 | AT1G05900.2 | 69.130 | 230 | 67 | 1 | 87 | 312 | 141 | 370 | 8.25e-118 | 345 |
| Msa0302940 | AT2G31450.1 | 58.108 | 296 | 101 | 4 | 40 | 312 | 68 | 363 | 1.12e-114 | 337 |
| Msa0302940 | AT2G31450.2 | 58.108 | 296 | 101 | 4 | 40 | 312 | 66 | 361 | 1.44e-114 | 337 |
| Msa0302940 | AT1G05900.1 | 69.006 | 171 | 49 | 1 | 87 | 253 | 141 | 311 | 6.46e-82 | 251 |
Find 86 sgRNAs with CRISPR-Local
Find 229 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAGAAATATCTTGAACATTT+TGG | 0.068380 | 2_3:-59949837 | Msa0302940:three_prime_UTR |
| CTTGTTCAATCGAGACTTAT+TGG | 0.203463 | 2_3:+59949941 | None:intergenic |
| CATACCAAAAGATAATTTAT+TGG | 0.207423 | 2_3:+59950287 | None:intergenic |
| TGAAAATTCACAAGATTAAA+AGG | 0.212101 | 2_3:+59949728 | None:intergenic |
| ACCTTGGTGTGGATTGGTTT+TGG | 0.284053 | 2_3:+59953075 | None:intergenic |
| CAGCGCCTTTCTAGTTTCTT+CGG | 0.287332 | 2_3:+59950340 | None:intergenic |
| GAAATTGAACAGGTAGGATT+TGG | 0.294623 | 2_3:-59950065 | Msa0302940:intron |
| GGTTCCAATAAATTATCTTT+TGG | 0.302688 | 2_3:-59950291 | Msa0302940:intron |
| CACAACAGGAACAAATGAAT+TGG | 0.309361 | 2_3:-59952713 | Msa0302940:CDS |
| ATTTGCAGCAAGTGCTTCTT+TGG | 0.316813 | 2_3:+59952916 | None:intergenic |
| ACTCAACGTCTTCGTCAAAA+TGG | 0.325296 | 2_3:-59951302 | Msa0302940:CDS |
| ACCAAACAAACAGAAGTAAA+AGG | 0.327365 | 2_3:+59953145 | None:intergenic |
| GGACAATATGTACTCCTTTA+CGG | 0.370840 | 2_3:-59950040 | Msa0302940:CDS |
| GAGGAACTACTCTTACTTCC+AGG | 0.381417 | 2_3:-59950941 | Msa0302940:CDS |
| AGTAGTTCCTCAATTGAGTT+AGG | 0.388972 | 2_3:+59950953 | None:intergenic |
| TGGCCCCAGCCCACATAGTA+AGG | 0.391071 | 2_3:+59949700 | None:intergenic |
| CATACCAAATGAGCAATCTT+AGG | 0.391610 | 2_3:+59950911 | None:intergenic |
| GAGTAACATGCTCCTTAGTT+TGG | 0.393553 | 2_3:+59952152 | None:intergenic |
| CTACCTACCTTGGTGTGGAT+TGG | 0.393734 | 2_3:+59953069 | None:intergenic |
| AGACTTCAAGTTCATCTTCC+AGG | 0.395330 | 2_3:-59949965 | Msa0302940:CDS |
| AGCGCCTTTCTAGTTTCTTC+GGG | 0.398885 | 2_3:+59950341 | None:intergenic |
| AGGTCCTAAGATTGCTCATT+TGG | 0.400492 | 2_3:-59950915 | Msa0302940:intron |
| TACATGCATAGCTAAGAGTT+TGG | 0.410876 | 2_3:-59949878 | Msa0302940:three_prime_UTR |
| TACTACACAGAAGTTTGGTT+TGG | 0.413142 | 2_3:-59952761 | Msa0302940:intron |
| GTTCTGCCCGTCAGCATTCA+AGG | 0.415318 | 2_3:-59949988 | Msa0302940:CDS |
| TAGATGAAAGTCCTGCCAAT+TGG | 0.428361 | 2_3:-59952588 | Msa0302940:CDS |
| AAGCACTTGCTGCAAATTCA+AGG | 0.437898 | 2_3:-59952910 | Msa0302940:CDS |
| CGCTGGAACGGTGGCTTCCG+AGG | 0.442006 | 2_3:-59950322 | Msa0302940:CDS |
| AAAACAAACCTGCTTTGTGC+CGG | 0.443349 | 2_3:+59950688 | None:intergenic |
| GGTGGCTTCCGAGGGAAGAA+TGG | 0.447991 | 2_3:-59950313 | Msa0302940:CDS |
| ATTTGTCTCACTAAGTATGA+TGG | 0.460497 | 2_3:-59950983 | Msa0302940:CDS |
| CACCGCATCTGCAATCGTCT+TGG | 0.460837 | 2_3:-59950725 | Msa0302940:CDS |
| CTTGGATGGGTTTCGAGACC+CGG | 0.461852 | 2_3:-59950707 | Msa0302940:CDS |
| AAACAAACCTGCTTTGTGCC+GGG | 0.463925 | 2_3:+59950689 | None:intergenic |
| GCATCTGCAATCGTCTTGGA+TGG | 0.472657 | 2_3:-59950721 | Msa0302940:CDS |
| CATTAGATTTAGACCTTAGG+AGG | 0.472679 | 2_3:+59952487 | None:intergenic |
| AGATGAAAGTCCTGCCAATT+GGG | 0.477356 | 2_3:-59952587 | Msa0302940:CDS |
| TTTGGTTTGGCTGAGATTGA+AGG | 0.478944 | 2_3:-59952748 | Msa0302940:CDS |
| ATTGGGAAAACGTGCTTGAA+GGG | 0.480580 | 2_3:-59952570 | Msa0302940:CDS |
| AATTGGGAAAACGTGCTTGA+AGG | 0.485015 | 2_3:-59952571 | Msa0302940:CDS |
| TTCGAGACCCGGCACAAAGC+AGG | 0.485026 | 2_3:-59950696 | Msa0302940:intron |
| AAAACATGTTGGTCTTGTAA+TGG | 0.489092 | 2_3:+59953102 | None:intergenic |
| ACAACAGGAACAAATGAATT+GGG | 0.495856 | 2_3:-59952712 | Msa0302940:CDS |
| GGACAGAAGATTTGCTGTCC+TGG | 0.497504 | 2_3:-59952194 | Msa0302940:CDS |
| GGATCTGCTGCATACACAAC+AGG | 0.501474 | 2_3:-59952727 | Msa0302940:CDS |
| TCTGCACAGCGAGGCCGTAA+AGG | 0.510897 | 2_3:+59950026 | None:intergenic |
| CAATCGAGACTTATTGGACC+TGG | 0.515302 | 2_3:+59949947 | None:intergenic |
| ATTGGAACCCATTCTTCCCT+CGG | 0.515483 | 2_3:+59950305 | None:intergenic |
| TTTGTCTCACTAAGTATGAT+GGG | 0.525399 | 2_3:-59950982 | Msa0302940:CDS |
| TCGATAAAAGAGAAGATGCC+AGG | 0.527820 | 2_3:+59952176 | None:intergenic |
| GAAGTCTCCTTGAATGCTGA+CGG | 0.529421 | 2_3:+59949981 | None:intergenic |
| TTTGTGGGCTTGCATAAATG+TGG | 0.532588 | 2_3:-59949752 | Msa0302940:three_prime_UTR |
| CGAAGAAACTAGAAAGGCGC+TGG | 0.533567 | 2_3:-59950339 | Msa0302940:CDS |
| GTGGCTTCCGAGGGAAGAAT+GGG | 0.536497 | 2_3:-59950312 | Msa0302940:CDS |
| GATAGACACTACAGGTGATC+GGG | 0.536871 | 2_3:-59952527 | Msa0302940:CDS |
| TGTTGATATTCATCCTCCTA+AGG | 0.549271 | 2_3:-59952500 | Msa0302940:intron |
| ATCCAAGACGATTGCAGATG+CGG | 0.553059 | 2_3:+59950723 | None:intergenic |
| GGCCCCAGCCCACATAGTAA+GGG | 0.555893 | 2_3:+59949701 | None:intergenic |
| CGATAGACACTACAGGTGAT+CGG | 0.557021 | 2_3:-59952528 | Msa0302940:CDS |
| GCCCCAGCCCACATAGTAAG+GGG | 0.562499 | 2_3:+59949702 | None:intergenic |
| CATCTGCAATCGTCTTGGAT+GGG | 0.565079 | 2_3:-59950720 | Msa0302940:CDS |
| GCTGGAACGGTGGCTTCCGA+GGG | 0.566400 | 2_3:-59950321 | Msa0302940:CDS |
| AAGTCTCCTTGAATGCTGAC+GGG | 0.572187 | 2_3:+59949982 | None:intergenic |
| CTAGAAAGGCGCTGGAACGG+TGG | 0.575424 | 2_3:-59950331 | Msa0302940:CDS |
| GCAATCTTAGGACCTACGCC+TGG | 0.583177 | 2_3:+59950923 | None:intergenic |
| TTGAACAGGTAGGATTTGGA+AGG | 0.583390 | 2_3:-59950061 | Msa0302940:intron |
| TTGTGGGCTTGCATAAATGT+GGG | 0.585024 | 2_3:-59949751 | Msa0302940:three_prime_UTR |
| AATACCCGAAGAAACTAGAA+AGG | 0.587513 | 2_3:-59950345 | Msa0302940:CDS |
| AAACTAGAAAGGCGCTGGAA+CGG | 0.595096 | 2_3:-59950334 | Msa0302940:CDS |
| GAGTATCTACACATATCCCT+TGG | 0.595774 | 2_3:+59950753 | None:intergenic |
| ATTGCATGGAACAATGTCCA+AGG | 0.598895 | 2_3:-59950770 | Msa0302940:CDS |
| GGACATACCTAACTCAATTG+AGG | 0.599951 | 2_3:-59950960 | Msa0302940:CDS |
| TAAGTCTCGATTGAACAAGA+AGG | 0.604271 | 2_3:-59949937 | Msa0302940:CDS |
| ATGTATTCGATAGACACTAC+AGG | 0.611197 | 2_3:-59952535 | Msa0302940:CDS |
| AGTAGCTACCTACCTTGGTG+TGG | 0.611329 | 2_3:+59953064 | None:intergenic |
| TCAAAATGGTCTTCTTACTG+CGG | 0.633029 | 2_3:-59951288 | Msa0302940:CDS |
| CAAGACGATTGCAGATGCGG+TGG | 0.636787 | 2_3:+59950726 | None:intergenic |
| CGGCCTCGCTGTGCAGAGTG+TGG | 0.639111 | 2_3:-59950020 | Msa0302940:CDS |
| TGTAGGTTATGATTATTGCA+TGG | 0.646193 | 2_3:-59950784 | Msa0302940:intron |
| CCCCAGCCCACATAGTAAGG+GGG | 0.650165 | 2_3:+59949703 | None:intergenic |
| TTGCATGGAACAATGTCCAA+GGG | 0.650900 | 2_3:-59950769 | Msa0302940:CDS |
| CTACTCTTACTTCCAGGCGT+AGG | 0.662681 | 2_3:-59950935 | Msa0302940:CDS |
| TTGTCTCACTAAGTATGATG+GGG | 0.670790 | 2_3:-59950981 | Msa0302940:CDS |
| TCCAAAACCAATCCACACCA+AGG | 0.688155 | 2_3:-59953076 | Msa0302940:intron |
| ACACCACACTCTGCACAGCG+AGG | 0.705381 | 2_3:+59950017 | None:intergenic |
| ACTAAGGAGCATGTTACTCG+CGG | 0.708659 | 2_3:-59952148 | Msa0302940:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTGAAATCAAAATAAAATAA+TGG | + | chr2_3:59950603-59950622 | None:intergenic | 10.0% |
| !!! | AAATTTTTATGCATATAATT+AGG | - | chr2_3:59950670-59950689 | Msa0302940:intron | 10.0% |
| !! | ATATATATGTTATAACATAA+TGG | - | chr2_3:59952312-59952331 | Msa0302940:intron | 10.0% |
| !! | TATATATGTTATAACATAAT+GGG | - | chr2_3:59952313-59952332 | Msa0302940:intron | 10.0% |
| !!! | AATTGTTTATAAAAATTTTG+GGG | - | chr2_3:59953087-59953106 | Msa0302940:CDS | 10.0% |
| !! | AATTAAGGAAAGAAAATTTA+AGG | + | chr2_3:59949892-59949911 | None:intergenic | 15.0% |
| !! | TGAAGAGATAAAAAAAATTA+AGG | + | chr2_3:59949907-59949926 | None:intergenic | 15.0% |
| !!! | TCAATTTTCATACAAAAATT+TGG | - | chr2_3:59950044-59950063 | Msa0302940:CDS | 15.0% |
| !!! | CAATTTTCATACAAAAATTT+GGG | - | chr2_3:59950045-59950064 | Msa0302940:CDS | 15.0% |
| !! | ATAAATTATATTGCAATACA+TGG | + | chr2_3:59950093-59950112 | None:intergenic | 15.0% |
| !!! | TATAAAGTTAAGTTATTTCT+TGG | - | chr2_3:59950493-59950512 | Msa0302940:intron | 15.0% |
| !! | TATTTACATTCTCAAATTTA+TGG | - | chr2_3:59950766-59950785 | Msa0302940:CDS | 15.0% |
| !! | TCAATTAATAAAACACAAAA+AGG | + | chr2_3:59951797-59951816 | None:intergenic | 15.0% |
| !!! | TTTAAGATTCATTTTGTTAA+TGG | - | chr2_3:59952039-59952058 | Msa0302940:intron | 15.0% |
| !! | ATTACTATATAAGATTATCA+AGG | - | chr2_3:59952272-59952291 | Msa0302940:intron | 15.0% |
| !!! | CTTTTGATTTTTTTATTTGT+GGG | - | chr2_3:59953118-59953137 | Msa0302940:CDS | 15.0% |
| !! | AATTGCTTAGATTAGAAAAA+GGG | + | chr2_3:59950024-59950043 | None:intergenic | 20.0% |
| !! | AAATTGCTTAGATTAGAAAA+AGG | + | chr2_3:59950025-59950044 | None:intergenic | 20.0% |
| !! | TTACAATAATACATCATGAT+GGG | - | chr2_3:59950535-59950554 | Msa0302940:intron | 20.0% |
| !!! | TTATATTAGCTATTGACTAT+TGG | - | chr2_3:59950576-59950595 | Msa0302940:intron | 20.0% |
| !!! | TATATTAGCTATTGACTATT+GGG | - | chr2_3:59950577-59950596 | Msa0302940:intron | 20.0% |
| !! | ATGGATATGATAAAAAAACA+TGG | + | chr2_3:59951189-59951208 | None:intergenic | 20.0% |
| !!! | ATGATCAATTAATTTGGATT+TGG | - | chr2_3:59951709-59951728 | Msa0302940:intron | 20.0% |
| !!! | AATATCTATGCTTATACTTT+TGG | - | chr2_3:59951816-59951835 | Msa0302940:intron | 20.0% |
| !!! | ATATCTATGCTTATACTTTT+GGG | - | chr2_3:59951817-59951836 | Msa0302940:intron | 20.0% |
| !! | CTTAAAACTAATGAAACAAA+CGG | + | chr2_3:59952025-59952044 | None:intergenic | 20.0% |
| !! | GTACAAGAAAAAAAAAAAAC+TGG | + | chr2_3:59952451-59952470 | None:intergenic | 20.0% |
| !! | CATACCAAAAGATAATTTAT+TGG | + | chr2_3:59952601-59952620 | None:intergenic | 20.0% |
| !! | AATCCAAAATATAACCATTT+AGG | + | chr2_3:59952692-59952711 | None:intergenic | 20.0% |
| !!! | AAATGGTTATATTTTGGATT+TGG | - | chr2_3:59952692-59952711 | Msa0302940:intron | 20.0% |
| !!! | AGAAATATCTTGAACATTTT+GGG | - | chr2_3:59953049-59953068 | Msa0302940:intron | 20.0% |
| !! | CCACAAATAAAAAAATCAAA+AGG | + | chr2_3:59953120-59953139 | None:intergenic | 20.0% |
| !!! | CCTTTTGATTTTTTTATTTG+TGG | - | chr2_3:59953117-59953136 | Msa0302940:CDS | 20.0% |
| !! | TGAAAATTCACAAGATTAAA+AGG | + | chr2_3:59953160-59953179 | None:intergenic | 20.0% |
| !!! | AAACATTTTTGGAAATTGTC+GGG | + | chr2_3:59949714-59949733 | None:intergenic | 25.0% |
| !!! | CAAACATTTTTGGAAATTGT+CGG | + | chr2_3:59949715-59949734 | None:intergenic | 25.0% |
| !! | AAAGGAAACACAAACATTTT+TGG | + | chr2_3:59949725-59949744 | None:intergenic | 25.0% |
| ! | GGAAAGAAAATTTAAGGAAA+AGG | + | chr2_3:59949886-59949905 | None:intergenic | 25.0% |
| !!! | TCAAATAAAGTCTCACTTTT+TGG | + | chr2_3:59950001-59950020 | None:intergenic | 25.0% |
| !! | AATTTTACTACACAGAAGTT+TGG | - | chr2_3:59950119-59950138 | Msa0302940:intron | 25.0% |
| !! | TTGCATGAAATGTATAGTTT+TGG | - | chr2_3:59950215-59950234 | Msa0302940:intron | 25.0% |
| !! | TGCATGAAATGTATAGTTTT+GGG | - | chr2_3:59950216-59950235 | Msa0302940:intron | 25.0% |
| !!! | TATGGAAGTGTTTTTAGTTT+AGG | - | chr2_3:59950251-59950270 | Msa0302940:intron | 25.0% |
| !!! | ATGGAAGTGTTTTTAGTTTA+GGG | - | chr2_3:59950252-59950271 | Msa0302940:intron | 25.0% |
| ! | GTTACAATAATACATCATGA+TGG | - | chr2_3:59950534-59950553 | Msa0302940:intron | 25.0% |
| ! | AATAATGAGATCTCAAACTT+AGG | + | chr2_3:59950992-59951011 | None:intergenic | 25.0% |
| ! | ATGTTCAGAAAAAGTTTGAA+TGG | + | chr2_3:59951208-59951227 | None:intergenic | 25.0% |
| ! | CTGAAACTTATAGAATATTC+TGG | - | chr2_3:59951260-59951279 | Msa0302940:CDS | 25.0% |
| ! | ATTAGTATGTATCCATTACA+AGG | - | chr2_3:59951323-59951342 | Msa0302940:intron | 25.0% |
| ! | CTTTCTATAACATGCAATAT+AGG | + | chr2_3:59951392-59951411 | None:intergenic | 25.0% |
| !! | CTTTTTATGTGATCAATTCT+TGG | - | chr2_3:59951502-59951521 | Msa0302940:intron | 25.0% |
| ! | TCTCGTATGATCAATTAATT+TGG | - | chr2_3:59951703-59951722 | Msa0302940:intron | 25.0% |
| !!! | GATTCCATTTTTTAAGCTTT+CGG | - | chr2_3:59951744-59951763 | Msa0302940:intron | 25.0% |
| ! | AATACCGAAAGCTTAAAAAA+TGG | + | chr2_3:59951751-59951770 | None:intergenic | 25.0% |
| ! | ATTATCAAGGCTTATGTTAT+GGG | - | chr2_3:59952285-59952304 | Msa0302940:intron | 25.0% |
| !! | TGAGAATTTTGTTCTTTGAT+TGG | - | chr2_3:59952425-59952444 | Msa0302940:intron | 25.0% |
| !! | GGTTCCAATAAATTATCTTT+TGG | - | chr2_3:59952594-59952613 | Msa0302940:intron | 25.0% |
| ! | ACTATATACTACATAGTCAA+AGG | + | chr2_3:59952640-59952659 | None:intergenic | 25.0% |
| ! | ACTTGAATATGAAATTGAAC+AGG | - | chr2_3:59952810-59952829 | Msa0302940:intron | 25.0% |
| !! | GAGAAATATCTTGAACATTT+TGG | - | chr2_3:59953048-59953067 | Msa0302940:intron | 25.0% |
| !! | GAAATATCTTGAACATTTTG+GGG | - | chr2_3:59953050-59953069 | Msa0302940:intron | 25.0% |
| !!! | TTTATAAAAATTTTGGGGCT+TGG | - | chr2_3:59953092-59953111 | Msa0302940:CDS | 25.0% |
| !!! | TTATAAAAATTTTGGGGCTT+GGG | - | chr2_3:59953093-59953112 | Msa0302940:CDS | 25.0% |
| !! | AACATTTTTGGAAATTGTCG+GGG | + | chr2_3:59949713-59949732 | None:intergenic | 30.0% |
| ! | TCCTTTTACTTCTGTTTGTT+TGG | - | chr2_3:59949739-59949758 | Msa0302940:three_prime_UTR | 30.0% |
| ACCAAACAAACAGAAGTAAA+AGG | + | chr2_3:59949743-59949762 | None:intergenic | 30.0% | |
| !! | AAAACATGTTGGTCTTGTAA+TGG | + | chr2_3:59949786-59949805 | None:intergenic | 30.0% |
| ACAACAGGAACAAATGAATT+GGG | - | chr2_3:59950173-59950192 | Msa0302940:intron | 30.0% | |
| !! | TTTGGGTTGATTCTATTCTA+TGG | - | chr2_3:59950233-59950252 | Msa0302940:intron | 30.0% |
| TAGCATTAGATTTAGACCTT+AGG | + | chr2_3:59950404-59950423 | None:intergenic | 30.0% | |
| ! | GAAATTAAGCACTAACCTTT+TGG | - | chr2_3:59950451-59950470 | Msa0302940:intron | 30.0% |
| CATTAAAGACATAAGCCAAA+AGG | + | chr2_3:59950469-59950488 | None:intergenic | 30.0% | |
| TTGGACAGTTAAATTGTGTT+TGG | - | chr2_3:59950512-59950531 | Msa0302940:intron | 30.0% | |
| CAGTAAAGTTATCCACAATA+AGG | + | chr2_3:59950638-59950657 | None:intergenic | 30.0% | |
| CATGACTATATGAAGTAGTT+TGG | - | chr2_3:59950890-59950909 | Msa0302940:intron | 30.0% | |
| CTAGATGAGAATCAACTAAA+TGG | + | chr2_3:59950917-59950936 | None:intergenic | 30.0% | |
| ! | TTTAGTTGATTCTCATCTAG+TGG | - | chr2_3:59950917-59950936 | Msa0302940:CDS | 30.0% |
| ! | TCTTGTTGTATATGTAGTAG+AGG | - | chr2_3:59950958-59950977 | Msa0302940:CDS | 30.0% |
| ! | CTTGTTGTATATGTAGTAGA+GGG | - | chr2_3:59950959-59950978 | Msa0302940:CDS | 30.0% |
| TTGTTGTATATGTAGTAGAG+GGG | - | chr2_3:59950960-59950979 | Msa0302940:CDS | 30.0% | |
| CTACATTAAGAAATGCTGAA+CGG | + | chr2_3:59951039-59951058 | None:intergenic | 30.0% | |
| ACAGATGATAAACACAATTG+GGG | + | chr2_3:59951482-59951501 | None:intergenic | 30.0% | |
| GACAGATGATAAACACAATT+GGG | + | chr2_3:59951483-59951502 | None:intergenic | 30.0% | |
| AGACAGATGATAAACACAAT+TGG | + | chr2_3:59951484-59951503 | None:intergenic | 30.0% | |
| !!! | GAGTGTGTTTTTTCAAGAAT+AGG | - | chr2_3:59951556-59951575 | Msa0302940:intron | 30.0% |
| TTAAGCTTTCGGTATTTCTT+TGG | - | chr2_3:59951755-59951774 | Msa0302940:intron | 30.0% | |
| !! | GGGTTTTATATAAGAAAAGC+TGG | - | chr2_3:59951857-59951876 | Msa0302940:intron | 30.0% |
| ATTTGTCTCACTAAGTATGA+TGG | - | chr2_3:59951902-59951921 | Msa0302940:intron | 30.0% | |
| TTTGTCTCACTAAGTATGAT+GGG | - | chr2_3:59951903-59951922 | Msa0302940:intron | 30.0% | |
| ! | TCCTGAAATCATTTTGTTAG+TGG | - | chr2_3:59952075-59952094 | Msa0302940:intron | 30.0% |
| ACCACTAACAAAATGATTTC+AGG | + | chr2_3:59952079-59952098 | None:intergenic | 30.0% | |
| TGTAGGTTATGATTATTGCA+TGG | - | chr2_3:59952101-59952120 | Msa0302940:intron | 30.0% | |
| !!! | AAGCAGGTTTGTTTTAAGTT+TGG | - | chr2_3:59952205-59952224 | Msa0302940:intron | 30.0% |
| TAGCATCACATTATATTTGC+TGG | - | chr2_3:59952228-59952247 | Msa0302940:intron | 30.0% | |
| GATTATCAAGGCTTATGTTA+TGG | - | chr2_3:59952284-59952303 | Msa0302940:intron | 30.0% | |
| ! | GCACCTAAATGGTTATATTT+TGG | - | chr2_3:59952686-59952705 | Msa0302940:intron | 30.0% |
| !! | TGGTTATATTTTGGATTTGG+TGG | - | chr2_3:59952695-59952714 | Msa0302940:intron | 30.0% |
| !! | GGTTATATTTTGGATTTGGT+GGG | - | chr2_3:59952696-59952715 | Msa0302940:intron | 30.0% |
| GAATATGAAATTGAACAGGT+AGG | - | chr2_3:59952814-59952833 | Msa0302940:intron | 30.0% | |
| !!! | TATAAAAATTTTGGGGCTTG+GGG | - | chr2_3:59953094-59953113 | Msa0302940:CDS | 30.0% |
| !!! | GTTTTGGAGGAAAAACATGT+TGG | + | chr2_3:59949797-59949816 | None:intergenic | 35.0% |
| ! | GTTTTTGCGTGTGTTGAATT+GGG | + | chr2_3:59949934-59949953 | None:intergenic | 35.0% |
| !! | TGTTTTTGCGTGTGTTGAAT+TGG | + | chr2_3:59949935-59949954 | None:intergenic | 35.0% |
| TACTACACAGAAGTTTGGTT+TGG | - | chr2_3:59950124-59950143 | Msa0302940:intron | 35.0% | |
| CACAACAGGAACAAATGAAT+TGG | - | chr2_3:59950172-59950191 | Msa0302940:intron | 35.0% | |
| ATGTATTCGATAGACACTAC+AGG | - | chr2_3:59950350-59950369 | Msa0302940:CDS | 35.0% | |
| TGTTGATATTCATCCTCCTA+AGG | - | chr2_3:59950385-59950404 | Msa0302940:intron | 35.0% | |
| CATTAGATTTAGACCTTAGG+AGG | + | chr2_3:59950401-59950420 | None:intergenic | 35.0% | |
| !! | ATTTATATTGACTTCGCGTG+TGG | - | chr2_3:59950423-59950442 | Msa0302940:intron | 35.0% |
| ! | CAATAATACATCATGATGGG+TGG | - | chr2_3:59950538-59950557 | Msa0302940:intron | 35.0% |
| TAACAGTGTGAACCTTATTG+TGG | - | chr2_3:59950623-59950642 | Msa0302940:intron | 35.0% | |
| ! | TCTTTTATCGAGCCAAACTA+AGG | - | chr2_3:59950721-59950740 | Msa0302940:CDS | 35.0% |
| ACCATTTGCATTCAACTTCA+TGG | + | chr2_3:59951102-59951121 | None:intergenic | 35.0% | |
| TGAAGTTGAATGCAAATGGT+TGG | - | chr2_3:59951102-59951121 | Msa0302940:intron | 35.0% | |
| ATGGTTGGACTAAGATTTAG+AGG | - | chr2_3:59951117-59951136 | Msa0302940:intron | 35.0% | |
| TTGGACTAAGATTTAGAGGA+AGG | - | chr2_3:59951121-59951140 | Msa0302940:intron | 35.0% | |
| !! | TTGAGCATGATTTGGTGAAA+TGG | - | chr2_3:59951146-59951165 | Msa0302940:intron | 35.0% |
| TTTGACGTGTAAGAGATGTT+TGG | - | chr2_3:59951230-59951249 | Msa0302940:intron | 35.0% | |
| TTGACGTGTAAGAGATGTTT+GGG | - | chr2_3:59951231-59951250 | Msa0302940:intron | 35.0% | |
| TCAAAATGGTCTTCTTACTG+CGG | - | chr2_3:59951597-59951616 | Msa0302940:intron | 35.0% | |
| GATTTACCCTGTATGTTCTT+TGG | - | chr2_3:59951660-59951679 | Msa0302940:intron | 35.0% | |
| AAGCTACCAAAGAACATACA+GGG | + | chr2_3:59951669-59951688 | None:intergenic | 35.0% | |
| AAAGCTACCAAAGAACATAC+AGG | + | chr2_3:59951670-59951689 | None:intergenic | 35.0% | |
| TTGTCTCACTAAGTATGATG+GGG | - | chr2_3:59951904-59951923 | Msa0302940:intron | 35.0% | |
| AGTAGTTCCTCAATTGAGTT+AGG | + | chr2_3:59951935-59951954 | None:intergenic | 35.0% | |
| CATACCAAATGAGCAATCTT+AGG | + | chr2_3:59951977-59951996 | None:intergenic | 35.0% | |
| !! | CATTTTGTTAGTGGTGATGT+AGG | - | chr2_3:59952084-59952103 | Msa0302940:intron | 35.0% |
| ! | ACATTATATTTGCTGGCTAG+AGG | - | chr2_3:59952235-59952254 | Msa0302940:intron | 35.0% |
| ! | CATTATATTTGCTGGCTAGA+GGG | - | chr2_3:59952236-59952255 | Msa0302940:intron | 35.0% |
| ! | GGTATTGAAGTTCTCTGATA+TGG | + | chr2_3:59952526-59952545 | None:intergenic | 35.0% |
| AATACCCGAAGAAACTAGAA+AGG | - | chr2_3:59952540-59952559 | Msa0302940:CDS | 35.0% | |
| TACCAACAAATGCACCTAAA+TGG | - | chr2_3:59952675-59952694 | Msa0302940:intron | 35.0% | |
| AACCATTTAGGTGCATTTGT+TGG | + | chr2_3:59952680-59952699 | None:intergenic | 35.0% | |
| GAAATTGAACAGGTAGGATT+TGG | - | chr2_3:59952820-59952839 | Msa0302940:intron | 35.0% | |
| GGACAATATGTACTCCTTTA+CGG | - | chr2_3:59952845-59952864 | Msa0302940:intron | 35.0% | |
| CTTGTTCAATCGAGACTTAT+TGG | + | chr2_3:59952947-59952966 | None:intergenic | 35.0% | |
| TAAGTCTCGATTGAACAAGA+AGG | - | chr2_3:59952948-59952967 | Msa0302940:CDS | 35.0% | |
| TACATGCATAGCTAAGAGTT+TGG | - | chr2_3:59953007-59953026 | Msa0302940:intron | 35.0% | |
| AAGTTAGTAGCTACCTACCT+TGG | + | chr2_3:59949829-59949848 | None:intergenic | 40.0% | |
| ATTTGCAGCAAGTGCTTCTT+TGG | + | chr2_3:59949972-59949991 | None:intergenic | 40.0% | |
| ! | AAGCACTTGCTGCAAATTCA+AGG | - | chr2_3:59949975-59949994 | Msa0302940:CDS | 40.0% |
| !! | TTTGGTTTGGCTGAGATTGA+AGG | - | chr2_3:59950137-59950156 | Msa0302940:intron | 40.0% |
| TAGATGAAAGTCCTGCCAAT+TGG | - | chr2_3:59950297-59950316 | Msa0302940:CDS | 40.0% | |
| AGATGAAAGTCCTGCCAATT+GGG | - | chr2_3:59950298-59950317 | Msa0302940:CDS | 40.0% | |
| ! | TTCAAGCACGTTTTCCCAAT+TGG | + | chr2_3:59950315-59950334 | None:intergenic | 40.0% |
| AATTGGGAAAACGTGCTTGA+AGG | - | chr2_3:59950314-59950333 | Msa0302940:CDS | 40.0% | |
| ATTGGGAAAACGTGCTTGAA+GGG | - | chr2_3:59950315-59950334 | Msa0302940:CDS | 40.0% | |
| !! | CATGATGGGTGGATTGTTAT+TGG | - | chr2_3:59950549-59950568 | Msa0302940:intron | 40.0% |
| TCGATAAAAGAGAAGATGCC+AGG | + | chr2_3:59950712-59950731 | None:intergenic | 40.0% | |
| GAGTAACATGCTCCTTAGTT+TGG | + | chr2_3:59950736-59950755 | None:intergenic | 40.0% | |
| CATCTAGTGGAAAGATGCTT+TGG | - | chr2_3:59950930-59950949 | Msa0302940:CDS | 40.0% | |
| ! | AAGTCTTGATTTTGCTCCAG+AGG | - | chr2_3:59951061-59951080 | Msa0302940:intron | 40.0% |
| GCATTCAACTTCATGGCAAT+AGG | + | chr2_3:59951095-59951114 | None:intergenic | 40.0% | |
| GCCATGAAGTTGAATGCAAA+TGG | - | chr2_3:59951098-59951117 | Msa0302940:intron | 40.0% | |
| !!! | GGAAGGTTTTGAGCATGATT+TGG | - | chr2_3:59951138-59951157 | Msa0302940:intron | 40.0% |
| ACTCAACGTCTTCGTCAAAA+TGG | - | chr2_3:59951583-59951602 | Msa0302940:intron | 40.0% | |
| ! | CTTTTGGGCATTCTTTTCTC+AGG | - | chr2_3:59951832-59951851 | Msa0302940:intron | 40.0% |
| GGACATACCTAACTCAATTG+AGG | - | chr2_3:59951925-59951944 | Msa0302940:intron | 40.0% | |
| AGGTCCTAAGATTGCTCATT+TGG | - | chr2_3:59951970-59951989 | Msa0302940:intron | 40.0% | |
| GATTGCTCATTTGGTATGTG+CGG | - | chr2_3:59951979-59951998 | Msa0302940:intron | 40.0% | |
| ATTGCATGGAACAATGTCCA+AGG | - | chr2_3:59952115-59952134 | Msa0302940:intron | 40.0% | |
| TTGCATGGAACAATGTCCAA+GGG | - | chr2_3:59952116-59952135 | Msa0302940:intron | 40.0% | |
| GAGTATCTACACATATCCCT+TGG | + | chr2_3:59952135-59952154 | None:intergenic | 40.0% | |
| AAAACAAACCTGCTTTGTGC+CGG | + | chr2_3:59952200-59952219 | None:intergenic | 40.0% | |
| AAGTTCTCTGATATGGCATG+GGG | + | chr2_3:59952519-59952538 | None:intergenic | 40.0% | |
| GAAGTTCTCTGATATGGCAT+GGG | + | chr2_3:59952520-59952539 | None:intergenic | 40.0% | |
| TGAAGTTCTCTGATATGGCA+TGG | + | chr2_3:59952521-59952540 | None:intergenic | 40.0% | |
| TTGAACAGGTAGGATTTGGA+AGG | - | chr2_3:59952824-59952843 | Msa0302940:intron | 40.0% | |
| ! | AGACTTCAAGTTCATCTTCC+AGG | - | chr2_3:59952920-59952939 | Msa0302940:CDS | 40.0% |
| !!! | ATCTTGAACATTTTGGGGCT+TGG | - | chr2_3:59953055-59953074 | Msa0302940:intron | 40.0% |
| TTTGTGGGCTTGCATAAATG+TGG | - | chr2_3:59953133-59953152 | Msa0302940:CDS | 40.0% | |
| TTGTGGGCTTGCATAAATGT+GGG | - | chr2_3:59953134-59953153 | Msa0302940:CDS | 40.0% | |
| !!! | TTGGTGTGGATTGGTTTTGG+AGG | + | chr2_3:59949810-59949829 | None:intergenic | 45.0% |
| TCCAAAACCAATCCACACCA+AGG | - | chr2_3:59949809-59949828 | Msa0302940:three_prime_UTR | 45.0% | |
| !!! | ACCTTGGTGTGGATTGGTTT+TGG | + | chr2_3:59949813-59949832 | None:intergenic | 45.0% |
| AAACCAATCCACACCAAGGT+AGG | - | chr2_3:59949813-59949832 | Msa0302940:three_prime_UTR | 45.0% | |
| CGATAGACACTACAGGTGAT+CGG | - | chr2_3:59950357-59950376 | Msa0302940:intron | 45.0% | |
| GATAGACACTACAGGTGATC+GGG | - | chr2_3:59950358-59950377 | Msa0302940:intron | 45.0% | |
| ! | ACTAAGGAGCATGTTACTCG+CGG | - | chr2_3:59950737-59950756 | Msa0302940:CDS | 45.0% |
| GCAATAGGTTTCTCATCCTC+TGG | + | chr2_3:59951080-59951099 | None:intergenic | 45.0% | |
| ! | TTCTGTGTCAGGCCTTGTAA+TGG | + | chr2_3:59951338-59951357 | None:intergenic | 45.0% |
| TTGCGCTTTCTTTCTGTGTC+AGG | + | chr2_3:59951349-59951368 | None:intergenic | 45.0% | |
| AGCAGCCATTATGTGCACTT+TGG | - | chr2_3:59951455-59951474 | Msa0302940:intron | 45.0% | |
| ! | TGGGCATTCTTTTCTCAGGT+TGG | - | chr2_3:59951836-59951855 | Msa0302940:intron | 45.0% |
| ! | GGGCATTCTTTTCTCAGGTT+GGG | - | chr2_3:59951837-59951856 | Msa0302940:intron | 45.0% |
| GAGGAACTACTCTTACTTCC+AGG | - | chr2_3:59951944-59951963 | Msa0302940:intron | 45.0% | |
| ATCCAAGACGATTGCAGATG+CGG | + | chr2_3:59952165-59952184 | None:intergenic | 45.0% | |
| CATCTGCAATCGTCTTGGAT+GGG | - | chr2_3:59952165-59952184 | Msa0302940:CDS | 45.0% | |
| AAACAAACCTGCTTTGTGCC+GGG | + | chr2_3:59952199-59952218 | None:intergenic | 45.0% | |
| !! | TTCTCAGTGCTGACAAACAC+CGG | + | chr2_3:59952411-59952430 | None:intergenic | 45.0% |
| !! | AGCGCCTTTCTAGTTTCTTC+GGG | + | chr2_3:59952547-59952566 | None:intergenic | 45.0% |
| !! | CAGCGCCTTTCTAGTTTCTT+CGG | + | chr2_3:59952548-59952567 | None:intergenic | 45.0% |
| !! | AAACTAGAAAGGCGCTGGAA+CGG | - | chr2_3:59952551-59952570 | Msa0302940:CDS | 45.0% |
| ATTGGAACCCATTCTTCCCT+CGG | + | chr2_3:59952583-59952602 | None:intergenic | 45.0% | |
| AAGTCTCCTTGAATGCTGAC+GGG | + | chr2_3:59952906-59952925 | None:intergenic | 45.0% | |
| GAAGTCTCCTTGAATGCTGA+CGG | + | chr2_3:59952907-59952926 | None:intergenic | 45.0% | |
| CAATCGAGACTTATTGGACC+TGG | + | chr2_3:59952941-59952960 | None:intergenic | 45.0% | |
| TTTCAAGCCCCCTTACTATG+TGG | - | chr2_3:59953175-59953194 | Msa0302940:exon | 45.0% | |
| TTCAAGCCCCCTTACTATGT+GGG | - | chr2_3:59953176-59953195 | Msa0302940:exon | 45.0% | |
| !!! | AAAATTGTTTATAAAAATTT+TGG | - | chr2_3:59953085-59953104 | Msa0302940:CDS | 5.0% |
| !!! | AAATTGTTTATAAAAATTTT+GGG | - | chr2_3:59953086-59953105 | Msa0302940:CDS | 5.0% |
| ! | CTACCTACCTTGGTGTGGAT+TGG | + | chr2_3:59949819-59949838 | None:intergenic | 50.0% |
| AGTAGCTACCTACCTTGGTG+TGG | + | chr2_3:59949824-59949843 | None:intergenic | 50.0% | |
| GGATCTGCTGCATACACAAC+AGG | - | chr2_3:59950158-59950177 | Msa0302940:intron | 50.0% | |
| ! | AGCACGTTTTCCCAATTGGC+AGG | + | chr2_3:59950311-59950330 | None:intergenic | 50.0% |
| !! | GGACAGAAGATTTGCTGTCC+TGG | - | chr2_3:59950691-59950710 | Msa0302940:intron | 50.0% |
| GGGGTCCAAAGTGCACATAA+TGG | + | chr2_3:59951463-59951482 | None:intergenic | 50.0% | |
| CTACTCTTACTTCCAGGCGT+AGG | - | chr2_3:59951950-59951969 | Msa0302940:intron | 50.0% | |
| GCATCTGCAATCGTCTTGGA+TGG | - | chr2_3:59952164-59952183 | Msa0302940:CDS | 50.0% | |
| TCTGATATGGCATGGGGAAG+AGG | + | chr2_3:59952513-59952532 | None:intergenic | 50.0% | |
| ! | CGAAGAAACTAGAAAGGCGC+TGG | - | chr2_3:59952546-59952565 | Msa0302940:CDS | 50.0% |
| GCAATCTTAGGACCTACGCC+TGG | + | chr2_3:59951965-59951984 | None:intergenic | 55.0% | |
| CAAGACGATTGCAGATGCGG+TGG | + | chr2_3:59952162-59952181 | None:intergenic | 55.0% | |
| CACCGCATCTGCAATCGTCT+TGG | - | chr2_3:59952160-59952179 | Msa0302940:CDS | 55.0% | |
| ! | CTTGGATGGGTTTCGAGACC+CGG | - | chr2_3:59952178-59952197 | Msa0302940:CDS | 55.0% |
| !! | TGCTTGACTTGCGAGTCAGC+CGG | - | chr2_3:59952389-59952408 | Msa0302940:intron | 55.0% |
| GTGGCTTCCGAGGGAAGAAT+GGG | - | chr2_3:59952573-59952592 | Msa0302940:CDS | 55.0% | |
| GTTCTGCCCGTCAGCATTCA+AGG | - | chr2_3:59952897-59952916 | Msa0302940:intron | 55.0% | |
| TTCGAGACCCGGCACAAAGC+AGG | - | chr2_3:59952189-59952208 | Msa0302940:CDS | 60.0% | |
| !! | CTAGAAAGGCGCTGGAACGG+TGG | - | chr2_3:59952554-59952573 | Msa0302940:CDS | 60.0% |
| GGTGGCTTCCGAGGGAAGAA+TGG | - | chr2_3:59952572-59952591 | Msa0302940:CDS | 60.0% | |
| TCTGCACAGCGAGGCCGTAA+AGG | + | chr2_3:59952862-59952881 | None:intergenic | 60.0% | |
| ACACCACACTCTGCACAGCG+AGG | + | chr2_3:59952871-59952890 | None:intergenic | 60.0% | |
| AGCCCCCTTACTATGTGGGC+TGG | - | chr2_3:59953180-59953199 | Msa0302940:five_prime_UTR | 60.0% | |
| GCCCCCTTACTATGTGGGCT+GGG | - | chr2_3:59953181-59953200 | Msa0302940:five_prime_UTR | 60.0% | |
| CCCCAGCCCACATAGTAAGG+GGG | + | chr2_3:59953185-59953204 | None:intergenic | 60.0% | |
| GCTGGAACGGTGGCTTCCGA+GGG | - | chr2_3:59952564-59952583 | Msa0302940:CDS | 65.0% | |
| CGCTGGAACGGTGGCTTCCG+AGG | - | chr2_3:59952563-59952582 | Msa0302940:CDS | 70.0% | |
| CGGCCTCGCTGTGCAGAGTG+TGG | - | chr2_3:59952865-59952884 | Msa0302940:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 59949703 | 59953204 | 59949703 | ID=Msa0302940;Name=Msa0302940 |
| chr2_3 | mRNA | 59949703 | 59953204 | 59949703 | ID=Msa0302940-mRNA-1;Parent=Msa0302940;Name=Msa0302940-mRNA-1;_AED=0.15;_eAED=0.15;_QI=25|1|1|1|1|1|10|226|329 |
| chr2_3 | exon | 59949703 | 59950075 | 59949703 | ID=Msa0302940-mRNA-1:exon:19498;Parent=Msa0302940-mRNA-1 |
| chr2_3 | exon | 59950292 | 59950375 | 59950292 | ID=Msa0302940-mRNA-1:exon:19497;Parent=Msa0302940-mRNA-1 |
| chr2_3 | exon | 59950697 | 59950801 | 59950697 | ID=Msa0302940-mRNA-1:exon:19496;Parent=Msa0302940-mRNA-1 |
| chr2_3 | exon | 59950916 | 59951053 | 59950916 | ID=Msa0302940-mRNA-1:exon:19495;Parent=Msa0302940-mRNA-1 |
| chr2_3 | exon | 59951238 | 59951329 | 59951238 | ID=Msa0302940-mRNA-1:exon:19494;Parent=Msa0302940-mRNA-1 |
| chr2_3 | exon | 59952149 | 59952215 | 59952149 | ID=Msa0302940-mRNA-1:exon:19493;Parent=Msa0302940-mRNA-1 |
| chr2_3 | exon | 59952501 | 59952607 | 59952501 | ID=Msa0302940-mRNA-1:exon:19492;Parent=Msa0302940-mRNA-1 |
| chr2_3 | exon | 59952704 | 59952773 | 59952704 | ID=Msa0302940-mRNA-1:exon:19491;Parent=Msa0302940-mRNA-1 |
| chr2_3 | exon | 59952903 | 59952979 | 59952903 | ID=Msa0302940-mRNA-1:exon:19490;Parent=Msa0302940-mRNA-1 |
| chr2_3 | exon | 59953077 | 59953204 | 59953077 | ID=Msa0302940-mRNA-1:exon:19489;Parent=Msa0302940-mRNA-1 |
| chr2_3 | five_prime_UTR | 59953180 | 59953204 | 59953180 | ID=Msa0302940-mRNA-1:five_prime_utr;Parent=Msa0302940-mRNA-1 |
| chr2_3 | CDS | 59953077 | 59953179 | 59953077 | ID=Msa0302940-mRNA-1:cds;Parent=Msa0302940-mRNA-1 |
| chr2_3 | CDS | 59952903 | 59952979 | 59952903 | ID=Msa0302940-mRNA-1:cds;Parent=Msa0302940-mRNA-1 |
| chr2_3 | CDS | 59952704 | 59952773 | 59952704 | ID=Msa0302940-mRNA-1:cds;Parent=Msa0302940-mRNA-1 |
| chr2_3 | CDS | 59952501 | 59952607 | 59952501 | ID=Msa0302940-mRNA-1:cds;Parent=Msa0302940-mRNA-1 |
| chr2_3 | CDS | 59952149 | 59952215 | 59952149 | ID=Msa0302940-mRNA-1:cds;Parent=Msa0302940-mRNA-1 |
| chr2_3 | CDS | 59951238 | 59951329 | 59951238 | ID=Msa0302940-mRNA-1:cds;Parent=Msa0302940-mRNA-1 |
| chr2_3 | CDS | 59950916 | 59951053 | 59950916 | ID=Msa0302940-mRNA-1:cds;Parent=Msa0302940-mRNA-1 |
| chr2_3 | CDS | 59950697 | 59950801 | 59950697 | ID=Msa0302940-mRNA-1:cds;Parent=Msa0302940-mRNA-1 |
| chr2_3 | CDS | 59950292 | 59950375 | 59950292 | ID=Msa0302940-mRNA-1:cds;Parent=Msa0302940-mRNA-1 |
| chr2_3 | CDS | 59949929 | 59950075 | 59949929 | ID=Msa0302940-mRNA-1:cds;Parent=Msa0302940-mRNA-1 |
| chr2_3 | three_prime_UTR | 59949703 | 59949928 | 59949703 | ID=Msa0302940-mRNA-1:three_prime_utr;Parent=Msa0302940-mRNA-1 |
| Gene Sequence |
| Protein sequence |
