Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0314440 | XP_003593792.2 | 96.739 | 276 | 9 | 0 | 1 | 276 | 53 | 328 | 0.0 | 549 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0314440 | sp|P08995|NO26_SOYBN | 61.397 | 272 | 98 | 2 | 1 | 272 | 1 | 265 | 3.39e-119 | 345 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0314440 | A0A396JAI1 | 96.739 | 276 | 9 | 0 | 1 | 276 | 53 | 328 | 0.0 | 549 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0010150 | Msa0314440 | 0.846334 | 2.317900e-59 | -8.615850e-47 |
| Msa0014590 | Msa0314440 | 0.843533 | 1.321650e-58 | -8.615850e-47 |
| Msa0027860 | Msa0314440 | 0.812211 | 4.752405e-51 | -8.615850e-47 |
| Msa0038010 | Msa0314440 | 0.812207 | 4.762167e-51 | -8.615850e-47 |
| Msa0046390 | Msa0314440 | 0.826773 | 2.257192e-54 | -8.615850e-47 |
| Msa0048950 | Msa0314440 | 0.813444 | 2.552391e-51 | -8.615850e-47 |
| Msa0059880 | Msa0314440 | 0.844855 | 5.838872e-59 | -8.615850e-47 |
| Msa0063540 | Msa0314440 | 0.827834 | 1.257033e-54 | -8.615850e-47 |
| Msa0064990 | Msa0314440 | 0.805603 | 1.232896e-49 | -8.615850e-47 |
| Msa0069480 | Msa0314440 | 0.801534 | 8.603942e-49 | -8.615850e-47 |
| Msa0074620 | Msa0314440 | 0.814499 | 1.493804e-51 | -8.615850e-47 |
| Msa0085110 | Msa0314440 | 0.824069 | 9.854836e-54 | -8.615850e-47 |
| Msa0085710 | Msa0314440 | 0.811555 | 6.603021e-51 | -8.615850e-47 |
| Msa0087900 | Msa0314440 | 0.809305 | 2.020501e-50 | -8.615850e-47 |
| Msa0090190 | Msa0314440 | 0.808970 | 2.383695e-50 | -8.615850e-47 |
| Msa0095910 | Msa0314440 | 0.808513 | 2.984611e-50 | -8.615850e-47 |
| Msa0108350 | Msa0314440 | 0.813714 | 2.225193e-51 | -8.615850e-47 |
| Msa0123530 | Msa0314440 | 0.802483 | 5.491375e-49 | -8.615850e-47 |
| Msa0132250 | Msa0314440 | 0.815171 | 1.060005e-51 | -8.615850e-47 |
| Msa0143710 | Msa0314440 | 0.801039 | 1.086728e-48 | -8.615850e-47 |
| Msa0150910 | Msa0314440 | 0.846655 | 1.894504e-59 | -8.615850e-47 |
| Msa0150920 | Msa0314440 | 0.829278 | 5.628243e-55 | -8.615850e-47 |
| Msa0154460 | Msa0314440 | 0.806628 | 7.501462e-50 | -8.615850e-47 |
| Msa0160580 | Msa0314440 | 0.802080 | 6.647566e-49 | -8.615850e-47 |
| Msa0170990 | Msa0314440 | 0.804709 | 1.896289e-49 | -8.615850e-47 |
| Msa0175060 | Msa0314440 | 0.804141 | 2.491237e-49 | -8.615850e-47 |
| Msa0177550 | Msa0314440 | 0.863474 | 2.426338e-64 | -8.615850e-47 |
| Msa0190670 | Msa0314440 | 0.853114 | 2.960156e-61 | -8.615850e-47 |
| Msa0190890 | Msa0314440 | 0.834120 | 3.601429e-56 | -8.615850e-47 |
| Msa0194230 | Msa0314440 | 0.952884 | 9.228627e-111 | -8.615850e-47 |
| Msa0195580 | Msa0314440 | 0.800649 | 1.305148e-48 | -8.615850e-47 |
| Msa0196260 | Msa0314440 | 0.814080 | 1.848338e-51 | -8.615850e-47 |
| Msa0197020 | Msa0314440 | 0.840549 | 8.132924e-58 | -8.615850e-47 |
| Msa0207640 | Msa0314440 | 0.829157 | 6.024044e-55 | -8.615850e-47 |
| Msa0210790 | Msa0314440 | 0.800574 | 1.352084e-48 | -8.615850e-47 |
| Msa0210850 | Msa0314440 | 0.809355 | 1.971484e-50 | -8.615850e-47 |
| Msa0212550 | Msa0314440 | 0.850299 | 1.858000e-60 | -8.615850e-47 |
| Msa0216760 | Msa0314440 | 0.828611 | 8.167138e-55 | -8.615850e-47 |
| Msa0220090 | Msa0314440 | 0.804402 | 2.198267e-49 | -8.615850e-47 |
| Msa0225910 | Msa0314440 | 0.811223 | 7.796451e-51 | -8.615850e-47 |
| Msa0233210 | Msa0314440 | 0.828284 | 9.794779e-55 | -8.615850e-47 |
| Msa0234120 | Msa0314440 | 0.844695 | 6.448268e-59 | -8.615850e-47 |
| Msa0238110 | Msa0314440 | 0.809794 | 1.586981e-50 | -8.615850e-47 |
| Msa0251120 | Msa0314440 | 0.800094 | 1.692954e-48 | -8.615850e-47 |
| Msa0252930 | Msa0314440 | 0.851138 | 1.078606e-60 | -8.615850e-47 |
| Msa0259110 | Msa0314440 | 0.823668 | 1.223574e-53 | -8.615850e-47 |
| Msa0261400 | Msa0314440 | 0.826276 | 2.965242e-54 | -8.615850e-47 |
| Msa0272210 | Msa0314440 | 0.821396 | 4.129751e-53 | -8.615850e-47 |
| Msa0274250 | Msa0314440 | 0.969289 | 6.628700e-130 | -8.615850e-47 |
| Msa0274260 | Msa0314440 | 0.850660 | 1.470589e-60 | -8.615850e-47 |
| Msa0276580 | Msa0314440 | 0.847092 | 1.438724e-59 | -8.615850e-47 |
| Msa0278460 | Msa0314440 | 0.836477 | 9.147539e-57 | -8.615850e-47 |
| Msa0278950 | Msa0314440 | 0.871834 | 5.052337e-67 | -8.615850e-47 |
| Msa0281190 | Msa0314440 | 0.818962 | 1.490590e-52 | -8.615850e-47 |
| Msa0287720 | Msa0314440 | 0.830775 | 2.428230e-55 | -8.615850e-47 |
| Msa0295980 | Msa0314440 | 0.812656 | 3.798542e-51 | -8.615850e-47 |
| Msa0299030 | Msa0314440 | 0.809716 | 1.648945e-50 | -8.615850e-47 |
| Msa0314440 | Msa0316600 | 0.845987 | 2.880991e-59 | -8.615850e-47 |
| Msa0314440 | Msa0318370 | 0.805589 | 1.241251e-49 | -8.615850e-47 |
| Msa0314440 | Msa0328090 | 0.855554 | 5.836693e-62 | -8.615850e-47 |
| Msa0314440 | Msa0334050 | 0.803640 | 3.165500e-49 | -8.615850e-47 |
| Msa0314440 | Msa0342130 | 0.810355 | 1.201143e-50 | -8.615850e-47 |
| Msa0314440 | Msa0342660 | 0.823026 | 1.728590e-53 | -8.615850e-47 |
| Msa0314440 | Msa0346170 | 0.825989 | 3.469847e-54 | -8.615850e-47 |
| Msa0314440 | Msa0348370 | 0.802536 | 5.355975e-49 | -8.615850e-47 |
| Msa0314440 | Msa0349910 | 0.826911 | 2.091521e-54 | -8.615850e-47 |
| Msa0314440 | Msa0361700 | 0.802596 | 5.205743e-49 | -8.615850e-47 |
| Msa0314440 | Msa0366510 | 0.840817 | 6.917210e-58 | -8.615850e-47 |
| Msa0314440 | Msa0370620 | 0.805336 | 1.402320e-49 | -8.615850e-47 |
| Msa0314440 | Msa0374040 | 0.837357 | 5.452774e-57 | -8.615850e-47 |
| Msa0314440 | Msa0396700 | 0.810950 | 8.933021e-51 | -8.615850e-47 |
| Msa0314440 | Msa0396860 | 0.835518 | 1.602047e-56 | -8.615850e-47 |
| Msa0314440 | Msa0409490 | 0.812662 | 3.787955e-51 | -8.615850e-47 |
| Msa0314440 | Msa0409500 | 0.804440 | 2.158280e-49 | -8.615850e-47 |
| Msa0314440 | Msa0414480 | 0.854691 | 1.039929e-61 | -8.615850e-47 |
| Msa0314440 | Msa0418150 | 0.819483 | 1.134295e-52 | -8.615850e-47 |
| Msa0314440 | Msa0418160 | 0.838466 | 2.827993e-57 | -8.615850e-47 |
| Msa0314440 | Msa0420890 | 0.803929 | 2.756717e-49 | -8.615850e-47 |
| Msa0314440 | Msa0423200 | 0.824206 | 9.151975e-54 | -8.615850e-47 |
| Msa0314440 | Msa0445530 | 0.805037 | 1.619744e-49 | -8.615850e-47 |
| Msa0314440 | Msa0464300 | 0.831530 | 1.584154e-55 | -8.615850e-47 |
| Msa0314440 | Msa0464310 | 0.865242 | 6.808261e-65 | -8.615850e-47 |
| Msa0314440 | Msa0469450 | 0.818947 | 1.502416e-52 | -8.615850e-47 |
| Msa0314440 | Msa0469460 | 0.808701 | 2.721925e-50 | -8.615850e-47 |
| Msa0314440 | Msa0491770 | 0.821854 | 3.235859e-53 | -8.615850e-47 |
| Msa0314440 | Msa0491800 | 0.813827 | 2.101788e-51 | -8.615850e-47 |
| Msa0314440 | Msa0491830 | 0.802888 | 4.530247e-49 | -8.615850e-47 |
| Msa0314440 | Msa0497680 | 0.809126 | 2.207622e-50 | -8.615850e-47 |
| Msa0314440 | Msa0515130 | 0.834259 | 3.324029e-56 | -8.615850e-47 |
| Msa0314440 | Msa0515150 | 0.827077 | 1.909191e-54 | -8.615850e-47 |
| Msa0314440 | Msa0526880 | 0.816666 | 4.916881e-52 | -8.615850e-47 |
| Msa0314440 | Msa0535570 | 0.860045 | 2.715010e-63 | -8.615850e-47 |
| Msa0314440 | Msa0536770 | 0.800816 | 1.206991e-48 | -8.615850e-47 |
| Msa0314440 | Msa0538440 | 0.838205 | 3.301403e-57 | -8.615850e-47 |
| Msa0314440 | Msa0538450 | 0.835081 | 2.065073e-56 | -8.615850e-47 |
| Msa0314440 | Msa0538520 | 0.836821 | 7.473606e-57 | -8.615850e-47 |
| Msa0314440 | Msa0538530 | 0.824003 | 1.021519e-53 | -8.615850e-47 |
| Msa0314440 | Msa0546760 | 0.805512 | 1.287982e-49 | -8.615850e-47 |
| Msa0314440 | Msa0549170 | 0.833322 | 5.701782e-56 | -8.615850e-47 |
| Msa0314440 | Msa0549920 | 0.807981 | 3.874723e-50 | -8.615850e-47 |
| Msa0314440 | Msa0554660 | 0.826971 | 2.024434e-54 | -8.615850e-47 |
| Msa0314440 | Msa0555920 | 0.810454 | 1.143274e-50 | -8.615850e-47 |
| Msa0314440 | Msa0589730 | 0.808756 | 2.648942e-50 | -8.615850e-47 |
| Msa0314440 | Msa0589740 | 0.808641 | 2.802904e-50 | -8.615850e-47 |
| Msa0314440 | Msa0591490 | 0.854886 | 9.126851e-62 | -8.615850e-47 |
| Msa0314440 | Msa0594320 | 0.838475 | 2.813144e-57 | -8.615850e-47 |
| Msa0314440 | Msa0594330 | 0.841885 | 3.621544e-58 | -8.615850e-47 |
| Msa0314440 | Msa0594630 | 0.800562 | 1.359489e-48 | -8.615850e-47 |
| Msa0314440 | Msa0601400 | 0.804225 | 2.393086e-49 | -8.615850e-47 |
| Msa0314440 | Msa0602050 | 0.817301 | 3.539808e-52 | -8.615850e-47 |
| Msa0314440 | Msa0604200 | 0.839986 | 1.141375e-57 | -8.615850e-47 |
| Msa0314440 | Msa0604280 | 0.827975 | 1.162418e-54 | -8.615850e-47 |
| Msa0314440 | Msa0605410 | 0.827586 | 1.441553e-54 | -8.615850e-47 |
| Msa0314440 | Msa0609460 | 0.800532 | 1.379255e-48 | -8.615850e-47 |
| Msa0314440 | Msa0631700 | 0.860742 | 1.670541e-63 | -8.615850e-47 |
| Msa0314440 | Msa0634290 | 0.824517 | 7.734972e-54 | -8.615850e-47 |
| Msa0314440 | Msa0639410 | 0.809491 | 1.843196e-50 | -8.615850e-47 |
| Msa0314440 | Msa0641700 | 0.815457 | 9.155442e-52 | -8.615850e-47 |
| Msa0314440 | Msa0643840 | 0.813555 | 2.411881e-51 | -8.615850e-47 |
| Msa0314440 | Msa0645060 | 0.805531 | 1.275975e-49 | -8.615850e-47 |
| Msa0314440 | Msa0645370 | 0.810822 | 9.521026e-51 | -8.615850e-47 |
| Msa0314440 | Msa0668220 | 0.817128 | 3.871670e-52 | -8.615850e-47 |
| Msa0314440 | Msa0670360 | 0.862851 | 3.782049e-64 | -8.615850e-47 |
| Msa0314440 | Msa0671490 | 0.800519 | 1.387208e-48 | -8.615850e-47 |
| Msa0314440 | Msa0671640 | 0.852310 | 5.020659e-61 | -8.615850e-47 |
| Msa0314440 | Msa0684560 | 0.816464 | 5.457441e-52 | -8.615850e-47 |
| Msa0314440 | Msa0684620 | 0.811399 | 7.138996e-51 | -8.615850e-47 |
| Msa0314440 | Msa0684720 | 0.818878 | 1.557501e-52 | -8.615850e-47 |
| Msa0314440 | Msa0685080 | 0.814995 | 1.159419e-51 | -8.615850e-47 |
| Msa0314440 | Msa0708680 | 0.802662 | 5.044561e-49 | -8.615850e-47 |
| Msa0314440 | Msa0711240 | 0.821195 | 4.594709e-53 | -8.615850e-47 |
| Msa0314440 | Msa0711260 | 0.813044 | 3.123430e-51 | -8.615850e-47 |
| Msa0314440 | Msa0727480 | 0.809490 | 1.844162e-50 | -8.615850e-47 |
| Msa0314440 | Msa0728210 | 0.800790 | 1.221922e-48 | -8.615850e-47 |
| Msa0314440 | Msa0735140 | 0.848846 | 4.723499e-60 | -8.615850e-47 |
| Msa0314440 | Msa0735340 | 0.807683 | 4.483780e-50 | -8.615850e-47 |
| Msa0314440 | Msa0751960 | 0.848671 | 5.284013e-60 | -8.615850e-47 |
| Msa0314440 | Msa0754530 | 0.809013 | 2.334325e-50 | -8.615850e-47 |
| Msa0314440 | Msa0757120 | 0.808429 | 3.110612e-50 | -8.615850e-47 |
| Msa0314440 | Msa0768670 | 0.810545 | 1.092769e-50 | -8.615850e-47 |
| Msa0314440 | Msa0768720 | 0.827041 | 1.947750e-54 | -8.615850e-47 |
| Msa0314440 | Msa0777060 | 0.819013 | 1.451072e-52 | -8.615850e-47 |
| Msa0314440 | Msa0777070 | 0.855422 | 6.376528e-62 | -8.615850e-47 |
| Msa0314440 | Msa0787860 | 0.844358 | 7.943107e-59 | -8.615850e-47 |
| Msa0314440 | Msa0792330 | 0.820337 | 7.235608e-53 | -8.615850e-47 |
| Msa0314440 | Msa0806930 | 0.842866 | 1.990817e-58 | -8.615850e-47 |
| Msa0314440 | Msa0814160 | 0.864628 | 1.060546e-64 | -8.615850e-47 |
| Msa0314440 | Msa0816140 | 0.843910 | 1.047687e-58 | -8.615850e-47 |
| Msa0314440 | Msa0822410 | 0.807820 | 4.193107e-50 | -8.615850e-47 |
| Msa0314440 | Msa0824850 | 0.843181 | 1.641328e-58 | -8.615850e-47 |
| Msa0314440 | Msa0824860 | 0.862257 | 5.762035e-64 | -8.615850e-47 |
| Msa0314440 | Msa0827800 | 0.807908 | 4.016332e-50 | -8.615850e-47 |
| Msa0314440 | Msa0831890 | 0.833580 | 4.914358e-56 | -8.615850e-47 |
| Msa0314440 | Msa0833230 | 0.802364 | 5.809340e-49 | -8.615850e-47 |
| Msa0314440 | Msa0839040 | 0.805858 | 1.089897e-49 | -8.615850e-47 |
| Msa0314440 | Msa0854840 | 0.867479 | 1.328079e-65 | -8.615850e-47 |
| Msa0314440 | Msa0861730 | 0.827638 | 1.400641e-54 | -8.615850e-47 |
| Msa0314440 | Msa0863840 | 0.854670 | 1.054229e-61 | -8.615850e-47 |
| Msa0314440 | Msa0863850 | 0.836507 | 8.988736e-57 | -8.615850e-47 |
| Msa0314440 | Msa0863860 | 0.837676 | 4.515260e-57 | -8.615850e-47 |
| Msa0314440 | Msa0864160 | 0.851712 | 7.423784e-61 | -8.615850e-47 |
| Msa0314440 | Msa0867080 | 0.855666 | 5.413450e-62 | -8.615850e-47 |
| Msa0314440 | Msa0883640 | 0.808643 | 2.800456e-50 | -8.615850e-47 |
| Msa0314440 | Msa0893840 | 0.811330 | 7.390638e-51 | -8.615850e-47 |
| Msa0314440 | Msa0896910 | 0.803039 | 4.216635e-49 | -8.615850e-47 |
| Msa0314440 | Msa0896920 | 0.832729 | 8.005106e-56 | -8.615850e-47 |
| Msa0314440 | Msa0898830 | -0.805042 | 1.615905e-49 | -8.615850e-47 |
| Msa0314440 | Msa0902340 | 0.820852 | 5.511036e-53 | -8.615850e-47 |
| Msa0314440 | Msa0910830 | 0.828579 | 8.311686e-55 | -8.615850e-47 |
| Msa0314440 | Msa0932930 | 0.805337 | 1.401779e-49 | -8.615850e-47 |
| Msa0314440 | Msa0933580 | 0.801215 | 1.000424e-48 | -8.615850e-47 |
| Msa0314440 | Msa0933590 | 0.805302 | 1.425382e-49 | -8.615850e-47 |
| Msa0314440 | Msa0933610 | 0.803549 | 3.305320e-49 | -8.615850e-47 |
| Msa0314440 | Msa0941120 | 0.836948 | 6.935542e-57 | -8.615850e-47 |
| Msa0314440 | Msa0960090 | 0.810750 | 9.871015e-51 | -8.615850e-47 |
| Msa0314440 | Msa0964510 | 0.808039 | 3.767671e-50 | -8.615850e-47 |
| Msa0314440 | Msa0985700 | 0.809912 | 1.496723e-50 | -8.615850e-47 |
| Msa0314440 | Msa0987640 | 0.801416 | 9.096250e-49 | -8.615850e-47 |
| Msa0314440 | Msa0993710 | 0.806979 | 6.324269e-50 | -8.615850e-47 |
| Msa0314440 | Msa0996980 | 0.823149 | 1.617628e-53 | -8.615850e-47 |
| Msa0314440 | Msa1006030 | 0.828515 | 8.612536e-55 | -8.615850e-47 |
| Msa0314440 | Msa1006170 | 0.831457 | 1.651220e-55 | -8.615850e-47 |
| Msa0314440 | Msa1009540 | 0.807122 | 5.896456e-50 | -8.615850e-47 |
| Msa0314440 | Msa1020540 | 0.801482 | 8.817665e-49 | -8.615850e-47 |
| Msa0314440 | Msa1021620 | 0.808777 | 2.621236e-50 | -8.615850e-47 |
| Msa0314440 | Msa1022490 | 0.849227 | 3.702436e-60 | -8.615850e-47 |
| Msa0314440 | Msa1022510 | 0.852271 | 5.149495e-61 | -8.615850e-47 |
| Msa0314440 | Msa1024350 | 0.843014 | 1.817834e-58 | -8.615850e-47 |
| Msa0314440 | Msa1024480 | 0.802008 | 6.877611e-49 | -8.615850e-47 |
| Msa0314440 | Msa1026050 | 0.815970 | 7.034648e-52 | -8.615850e-47 |
| Msa0314440 | Msa1030320 | 0.809581 | 1.762632e-50 | -8.615850e-47 |
| Msa0314440 | Msa1037530 | 0.802369 | 5.795572e-49 | -8.615850e-47 |
| Msa0314440 | Msa1040450 | 0.800137 | 1.659312e-48 | -8.615850e-47 |
| Msa0314440 | Msa1041630 | 0.814425 | 1.550721e-51 | -8.615850e-47 |
| Msa0314440 | Msa1041910 | 0.813391 | 2.621148e-51 | -8.615850e-47 |
| Msa0314440 | Msa1048350 | 0.822526 | 2.260211e-53 | -8.615850e-47 |
| Msa0314440 | Msa1048390 | 0.838744 | 2.397680e-57 | -8.615850e-47 |
| Msa0314440 | Msa1055450 | 0.802951 | 4.395862e-49 | -8.615850e-47 |
| Msa0314440 | Msa1061670 | 0.867893 | 9.781301e-66 | -8.615850e-47 |
| Msa0314440 | Msa1064940 | 0.854537 | 1.152522e-61 | -8.615850e-47 |
| Msa0314440 | Msa1068080 | 0.809474 | 1.858348e-50 | -8.615850e-47 |
| Msa0314440 | Msa1081610 | 0.838053 | 3.613820e-57 | -8.615850e-47 |
| Msa0314440 | Msa1087370 | 0.964207 | 4.892259e-123 | -8.615850e-47 |
| Msa0314440 | Msa1087380 | 0.866250 | 3.271660e-65 | -8.615850e-47 |
| Msa0314440 | Msa1098100 | 0.827195 | 1.789186e-54 | -8.615850e-47 |
| Msa0314440 | Msa1100330 | 0.814021 | 1.904716e-51 | -8.615850e-47 |
| Msa0314440 | Msa1104960 | 0.803951 | 2.727970e-49 | -8.615850e-47 |
| Msa0314440 | Msa1106680 | 0.877312 | 6.952101e-69 | -8.615850e-47 |
| Msa0314440 | Msa1106960 | 0.859851 | 3.106554e-63 | -8.615850e-47 |
| Msa0314440 | Msa1108560 | 0.802220 | 6.222369e-49 | -8.615850e-47 |
| Msa0314440 | Msa1109540 | 0.809022 | 2.323059e-50 | -8.615850e-47 |
| Msa0314440 | Msa1109880 | 0.816876 | 4.411515e-52 | -8.615850e-47 |
| Msa0314440 | Msa1109890 | 0.827244 | 1.740875e-54 | -8.615850e-47 |
| Msa0314440 | Msa1110040 | 0.824553 | 7.585231e-54 | -8.615850e-47 |
| Msa0314440 | Msa1127840 | 0.817239 | 3.655505e-52 | -8.615850e-47 |
| Msa0314440 | Msa1138110 | 0.839246 | 1.777044e-57 | -8.615850e-47 |
| Msa0314440 | Msa1147030 | 0.818588 | 1.812106e-52 | -8.615850e-47 |
| Msa0314440 | Msa1148210 | 0.819036 | 1.433624e-52 | -8.615850e-47 |
| Msa0314440 | Msa1153690 | 0.809922 | 1.489000e-50 | -8.615850e-47 |
| Msa0314440 | Msa1156240 | 0.825212 | 5.302948e-54 | -8.615850e-47 |
| Msa0314440 | Msa1157210 | 0.802005 | 6.887857e-49 | -8.615850e-47 |
| Msa0314440 | Msa1164690 | 0.807677 | 4.497556e-50 | -8.615850e-47 |
| Msa0314440 | Msa1166530 | 0.829859 | 4.065458e-55 | -8.615850e-47 |
| Msa0314440 | Msa1167960 | 0.824949 | 6.116478e-54 | -8.615850e-47 |
| Msa0314440 | Msa1170340 | 0.846643 | 1.909789e-59 | -8.615850e-47 |
| Msa0314440 | Msa1173290 | 0.804635 | 1.964700e-49 | -8.615850e-47 |
| Msa0314440 | Msa1177090 | 0.803306 | 3.711654e-49 | -8.615850e-47 |
| Msa0314440 | Msa1181090 | 0.817025 | 4.083777e-52 | -8.615850e-47 |
| Msa0314440 | Msa1181660 | 0.804127 | 2.507784e-49 | -8.615850e-47 |
| Msa0314440 | Msa1191270 | 0.813976 | 1.948679e-51 | -8.615850e-47 |
| Msa0314440 | Msa1191350 | 0.810859 | 9.349070e-51 | -8.615850e-47 |
| Msa0314440 | Msa1206330 | 0.805772 | 1.135743e-49 | -8.615850e-47 |
| Msa0314440 | Msa1206380 | 0.805962 | 1.036221e-49 | -8.615850e-47 |
| Msa0314440 | Msa1216600 | 0.802312 | 5.955094e-49 | -8.615850e-47 |
| Msa0314440 | Msa1225850 | 0.813711 | 2.229054e-51 | -8.615850e-47 |
| Msa0314440 | Msa1231720 | 0.810630 | 1.047408e-50 | -8.615850e-47 |
| Msa0314440 | Msa1236680 | 0.803841 | 2.875921e-49 | -8.615850e-47 |
| Msa0314440 | Msa1238250 | 0.801025 | 1.093679e-48 | -8.615850e-47 |
| Msa0314440 | Msa1245530 | 0.807902 | 4.028331e-50 | -8.615850e-47 |
| Msa0314440 | Msa1245800 | 0.830420 | 2.965812e-55 | -8.615850e-47 |
| Msa0314440 | Msa1256730 | 0.803636 | 3.171837e-49 | -8.615850e-47 |
| Msa0314440 | Msa1286420 | 0.825891 | 3.660797e-54 | -8.615850e-47 |
| Msa0314440 | Msa1294020 | 0.832622 | 8.511779e-56 | -8.615850e-47 |
| Msa0314440 | Msa1296870 | 0.810659 | 1.032501e-50 | -8.615850e-47 |
| Msa0314440 | Msa1298090 | 0.801629 | 8.228121e-49 | -8.615850e-47 |
| Msa0314440 | Msa1300610 | 0.807064 | 6.067451e-50 | -8.615850e-47 |
| Msa0314440 | Msa1319190 | 0.804489 | 2.108121e-49 | -8.615850e-47 |
| Msa0314440 | Msa1322500 | 0.818588 | 1.812750e-52 | -8.615850e-47 |
| Msa0314440 | Msa1323030 | 0.815730 | 7.957107e-52 | -8.615850e-47 |
| Msa0314440 | Msa1329740 | 0.801361 | 9.337486e-49 | -8.615850e-47 |
| Msa0314440 | Msa1341030 | 0.837567 | 4.816963e-57 | -8.615850e-47 |
| Msa0314440 | Msa1343590 | 0.831377 | 1.728015e-55 | -8.615850e-47 |
| Msa0314440 | Msa1355330 | 0.818054 | 2.393926e-52 | -8.615850e-47 |
| Msa0314440 | Msa1355340 | 0.859798 | 3.223791e-63 | -8.615850e-47 |
| Msa0314440 | Msa1357750 | 0.816222 | 6.181568e-52 | -8.615850e-47 |
| Msa0314440 | Msa1357840 | 0.833083 | 6.536129e-56 | -8.615850e-47 |
| Msa0314440 | Msa1357860 | 0.801074 | 1.068705e-48 | -8.615850e-47 |
| Msa0314440 | Msa1373560 | 0.814551 | 1.454231e-51 | -8.615850e-47 |
| Msa0314440 | Msa1376070 | 0.807639 | 4.581923e-50 | -8.615850e-47 |
| Msa0314440 | Msa1377520 | 0.807925 | 3.983367e-50 | -8.615850e-47 |
| Msa0314440 | Msa1380740 | 0.807825 | 4.182832e-50 | -8.615850e-47 |
| Msa0314440 | Msa1386120 | 0.805430 | 1.340251e-49 | -8.615850e-47 |
| Msa0314440 | Msa1387480 | 0.801026 | 1.093146e-48 | -8.615850e-47 |
| Msa0314440 | Msa1406840 | 0.804717 | 1.888899e-49 | -8.615850e-47 |
| Msa0314440 | Msa1407670 | 0.818218 | 2.198953e-52 | -8.615850e-47 |
| Msa0314440 | Msa1411550 | 0.879941 | 8.256716e-70 | -8.615850e-47 |
| Msa0314440 | Msa1412360 | 0.811748 | 5.994680e-51 | -8.615850e-47 |
| Msa0314440 | Msa1421130 | 0.816138 | 6.454635e-52 | -8.615850e-47 |
| Msa0314440 | Msa1427670 | 0.805608 | 1.229692e-49 | -8.615850e-47 |
| Msa0314440 | Msa1446090 | 0.805110 | 1.563351e-49 | -8.615850e-47 |
| Msa0314440 | Msa1448150 | 0.806788 | 6.940206e-50 | -8.615850e-47 |
| Msa0314440 | Msa1449770 | 0.812646 | 3.818912e-51 | -8.615850e-47 |
| Msa0314440 | Msa1456600 | 0.808599 | 2.861174e-50 | -8.615850e-47 |
| Msa0314440 | Msa1459610 | 0.831488 | 1.622595e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0314440 | MtrunA17_Chr2g0284631 | 96.739 | 276 | 9 | 0 | 1 | 276 | 53 | 328 | 0.0 | 549 |
| Msa0314440 | MtrunA17_Chr2g0284581 | 70.221 | 272 | 74 | 2 | 1 | 272 | 1 | 265 | 1.03e-141 | 399 |
| Msa0314440 | MtrunA17_Chr2g0284591 | 66.912 | 272 | 81 | 2 | 1 | 272 | 1 | 263 | 3.00e-134 | 380 |
| Msa0314440 | MtrunA17_Chr8g0379911 | 65.091 | 275 | 89 | 2 | 1 | 275 | 1 | 268 | 5.76e-134 | 379 |
| Msa0314440 | MtrunA17_Chr8g0379901 | 63.504 | 274 | 94 | 1 | 1 | 274 | 1 | 268 | 1.04e-129 | 369 |
| Msa0314440 | MtrunA17_Chr2g0284611 | 64.706 | 272 | 89 | 2 | 1 | 272 | 1 | 265 | 2.73e-125 | 357 |
| Msa0314440 | MtrunA17_Chr2g0284601 | 69.955 | 223 | 61 | 1 | 50 | 272 | 1 | 217 | 7.96e-116 | 332 |
| Msa0314440 | MtrunA17_Chr4g0044201 | 52.083 | 240 | 100 | 2 | 17 | 254 | 13 | 239 | 8.87e-90 | 267 |
| Msa0314440 | MtrunA17_Chr5g0435051 | 50.211 | 237 | 115 | 2 | 32 | 268 | 33 | 266 | 9.91e-84 | 252 |
| Msa0314440 | MtrunA17_Chr3g0079421 | 51.037 | 241 | 114 | 2 | 32 | 269 | 19 | 258 | 1.08e-83 | 251 |
| Msa0314440 | MtrunA17_Chr7g0217331 | 50.467 | 214 | 105 | 1 | 39 | 252 | 37 | 249 | 7.93e-76 | 232 |
| Msa0314440 | MtrunA17_Chr4g0001221 | 55.814 | 215 | 94 | 1 | 35 | 249 | 71 | 284 | 4.27e-74 | 228 |
| Msa0314440 | MtrunA17_Chr2g0333771 | 50.211 | 237 | 114 | 2 | 37 | 273 | 78 | 310 | 3.50e-73 | 226 |
| Msa0314440 | MtrunA17_Chr1g0201331 | 50.000 | 232 | 114 | 2 | 19 | 249 | 53 | 283 | 5.22e-68 | 213 |
| Msa0314440 | MtrunA17_Chr5g0426131 | 46.693 | 257 | 118 | 6 | 16 | 258 | 5 | 256 | 1.03e-65 | 206 |
| Msa0314440 | MtrunA17_Chr1g0184541 | 39.111 | 225 | 132 | 2 | 39 | 259 | 62 | 285 | 1.43e-49 | 165 |
| Msa0314440 | MtrunA17_Chr4g0001111 | 53.378 | 148 | 68 | 1 | 35 | 182 | 71 | 217 | 1.27e-40 | 140 |
| Msa0314440 | MtrunA17_Chr4g0001161 | 51.079 | 139 | 67 | 1 | 52 | 190 | 1 | 138 | 3.90e-33 | 118 |
| Msa0314440 | MtrunA17_Chr8g0340161 | 34.529 | 223 | 138 | 4 | 38 | 252 | 18 | 240 | 3.09e-27 | 105 |
| Msa0314440 | MtrunA17_Chr1g0188771 | 33.468 | 248 | 146 | 6 | 27 | 258 | 12 | 256 | 2.73e-26 | 103 |
| Msa0314440 | MtrunA17_Chr1g0146161 | 34.052 | 232 | 137 | 9 | 38 | 258 | 18 | 244 | 7.51e-26 | 102 |
| Msa0314440 | MtrunA17_Chr2g0331261 | 33.784 | 222 | 140 | 3 | 34 | 248 | 15 | 236 | 9.05e-26 | 102 |
| Msa0314440 | MtrunA17_Chr1g0146171 | 35.111 | 225 | 135 | 7 | 38 | 254 | 18 | 239 | 1.03e-25 | 102 |
| Msa0314440 | MtrunA17_Chr4g0001121 | 58.333 | 72 | 30 | 0 | 178 | 249 | 6 | 77 | 7.36e-25 | 95.5 |
| Msa0314440 | MtrunA17_Chr6g0478191 | 31.452 | 248 | 148 | 7 | 27 | 258 | 12 | 253 | 9.56e-24 | 97.1 |
| Msa0314440 | MtrunA17_Chr5g0399341 | 34.764 | 233 | 135 | 8 | 38 | 257 | 18 | 246 | 3.43e-23 | 95.1 |
| Msa0314440 | MtrunA17_Chr7g0264111 | 30.120 | 249 | 146 | 6 | 21 | 248 | 28 | 269 | 5.95e-22 | 92.8 |
| Msa0314440 | MtrunA17_Chr4g0001151 | 45.522 | 134 | 51 | 3 | 52 | 182 | 1 | 115 | 6.24e-22 | 93.2 |
| Msa0314440 | MtrunA17_Chr7g0264961 | 31.356 | 236 | 140 | 6 | 38 | 257 | 20 | 249 | 1.52e-21 | 90.9 |
| Msa0314440 | MtrunA17_Chr3g0145671 | 29.778 | 225 | 143 | 4 | 39 | 248 | 37 | 261 | 3.10e-21 | 90.5 |
| Msa0314440 | MtrunA17_Chr5g0436701 | 30.275 | 218 | 130 | 6 | 42 | 240 | 58 | 272 | 1.49e-20 | 89.0 |
| Msa0314440 | MtrunA17_Chr1g0199731 | 28.253 | 269 | 159 | 7 | 4 | 248 | 11 | 269 | 2.43e-20 | 88.2 |
| Msa0314440 | MtrunA17_Chr2g0326621 | 29.362 | 235 | 142 | 6 | 37 | 248 | 38 | 271 | 5.89e-20 | 87.0 |
| Msa0314440 | MtrunA17_Chr5g0397391 | 28.571 | 245 | 152 | 7 | 19 | 240 | 25 | 269 | 7.74e-20 | 87.0 |
| Msa0314440 | MtrunA17_Chr1g0212671 | 30.303 | 231 | 151 | 4 | 38 | 258 | 20 | 250 | 7.86e-20 | 86.3 |
| Msa0314440 | MtrunA17_Chr4g0006001 | 29.310 | 232 | 141 | 7 | 28 | 240 | 45 | 272 | 5.05e-19 | 84.7 |
| Msa0314440 | MtrunA17_Chr3g0113211 | 29.358 | 218 | 132 | 6 | 42 | 240 | 58 | 272 | 7.34e-19 | 84.3 |
| Msa0314440 | MtrunA17_Chr4g0030861 | 29.464 | 224 | 150 | 4 | 44 | 260 | 26 | 248 | 9.06e-19 | 83.2 |
| Msa0314440 | MtrunA17_Chr8g0386961 | 27.419 | 248 | 151 | 7 | 19 | 240 | 25 | 269 | 2.56e-18 | 82.8 |
| Msa0314440 | MtrunA17_Chr4g0029071 | 28.390 | 236 | 142 | 7 | 37 | 248 | 37 | 269 | 1.25e-16 | 77.8 |
| Msa0314440 | MtrunA17_Chr7g0222791 | 28.947 | 228 | 152 | 4 | 28 | 248 | 13 | 237 | 1.60e-15 | 74.3 |
| Msa0314440 | MtrunA17_Chr4g0020781 | 30.460 | 174 | 118 | 2 | 75 | 246 | 20 | 192 | 1.34e-13 | 68.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0314440 | AT4G18910.1 | 62.934 | 259 | 83 | 2 | 25 | 276 | 38 | 290 | 2.76e-117 | 338 |
| Msa0314440 | AT4G19030.1 | 58.456 | 272 | 100 | 2 | 11 | 275 | 27 | 292 | 2.37e-114 | 331 |
| Msa0314440 | AT1G31885.1 | 52.708 | 277 | 113 | 3 | 1 | 259 | 1 | 277 | 3.18e-101 | 298 |
| Msa0314440 | AT1G31885.2 | 57.399 | 223 | 81 | 2 | 51 | 259 | 1 | 223 | 4.51e-92 | 273 |
| Msa0314440 | AT5G37820.1 | 51.636 | 275 | 121 | 3 | 4 | 272 | 2 | 270 | 5.44e-92 | 274 |
| Msa0314440 | AT5G37820.2 | 51.636 | 275 | 121 | 3 | 4 | 272 | 38 | 306 | 2.34e-91 | 273 |
| Msa0314440 | AT5G37810.1 | 50.545 | 275 | 124 | 3 | 4 | 272 | 2 | 270 | 2.50e-90 | 270 |
| Msa0314440 | AT2G34390.1 | 53.030 | 264 | 107 | 6 | 1 | 248 | 1 | 263 | 1.79e-86 | 260 |
| Msa0314440 | AT4G18910.2 | 67.568 | 185 | 53 | 1 | 25 | 202 | 38 | 222 | 3.98e-86 | 256 |
| Msa0314440 | AT4G19030.3 | 61.111 | 198 | 70 | 1 | 11 | 201 | 27 | 224 | 2.84e-84 | 252 |
| Msa0314440 | AT2G34390.2 | 56.481 | 216 | 86 | 2 | 40 | 248 | 7 | 221 | 2.29e-83 | 250 |
| Msa0314440 | AT4G19030.2 | 59.777 | 179 | 65 | 1 | 11 | 182 | 27 | 205 | 1.29e-73 | 224 |
| Msa0314440 | AT1G80760.1 | 53.070 | 228 | 103 | 2 | 34 | 261 | 75 | 298 | 1.53e-73 | 228 |
| Msa0314440 | AT4G10380.1 | 50.885 | 226 | 110 | 1 | 35 | 260 | 74 | 298 | 2.32e-67 | 211 |
| Msa0314440 | AT2G34390.3 | 53.211 | 218 | 85 | 6 | 1 | 202 | 1 | 217 | 1.23e-66 | 207 |
| Msa0314440 | AT2G34390.4 | 53.000 | 200 | 77 | 6 | 1 | 184 | 1 | 199 | 3.96e-59 | 188 |
| Msa0314440 | AT3G06100.1 | 41.096 | 219 | 125 | 4 | 38 | 254 | 45 | 261 | 2.36e-49 | 164 |
| Msa0314440 | AT3G06100.2 | 41.395 | 215 | 122 | 4 | 42 | 254 | 1 | 213 | 1.57e-48 | 161 |
| Msa0314440 | AT1G31885.3 | 51.261 | 119 | 54 | 1 | 1 | 115 | 1 | 119 | 4.93e-35 | 123 |
| Msa0314440 | AT3G16240.1 | 35.874 | 223 | 130 | 6 | 34 | 246 | 14 | 233 | 6.65e-30 | 113 |
| Msa0314440 | AT2G29870.1 | 56.977 | 86 | 37 | 0 | 154 | 239 | 20 | 105 | 7.49e-29 | 107 |
| Msa0314440 | AT5G47450.1 | 34.091 | 220 | 138 | 3 | 34 | 246 | 14 | 233 | 1.03e-28 | 110 |
| Msa0314440 | AT4G17340.1 | 32.911 | 237 | 149 | 5 | 34 | 260 | 14 | 250 | 3.85e-27 | 106 |
| Msa0314440 | AT3G06100.3 | 39.716 | 141 | 83 | 2 | 115 | 254 | 41 | 180 | 5.67e-27 | 104 |
| Msa0314440 | AT3G26520.1 | 33.621 | 232 | 142 | 4 | 38 | 257 | 21 | 252 | 5.67e-26 | 103 |
| Msa0314440 | AT1G17810.1 | 37.500 | 168 | 101 | 2 | 91 | 254 | 86 | 253 | 1.28e-24 | 99.8 |
| Msa0314440 | AT2G25810.1 | 34.934 | 229 | 138 | 7 | 38 | 258 | 18 | 243 | 1.03e-23 | 97.1 |
| Msa0314440 | AT4G35100.1 | 30.418 | 263 | 158 | 6 | 5 | 248 | 6 | 262 | 4.74e-23 | 95.9 |
| Msa0314440 | AT4G35100.2 | 30.418 | 263 | 158 | 6 | 5 | 248 | 6 | 262 | 4.74e-23 | 95.9 |
| Msa0314440 | AT2G16850.1 | 31.556 | 225 | 139 | 5 | 39 | 248 | 36 | 260 | 2.61e-22 | 94.0 |
| Msa0314440 | AT1G73190.1 | 35.758 | 165 | 104 | 1 | 92 | 254 | 87 | 251 | 3.17e-22 | 93.6 |
| Msa0314440 | AT2G36830.1 | 32.900 | 231 | 144 | 5 | 38 | 257 | 20 | 250 | 3.74e-22 | 92.8 |
| Msa0314440 | AT5G60660.1 | 29.114 | 237 | 141 | 6 | 36 | 248 | 36 | 269 | 7.42e-21 | 90.1 |
| Msa0314440 | AT2G39010.1 | 29.310 | 232 | 141 | 6 | 39 | 248 | 38 | 268 | 4.14e-20 | 88.2 |
| Msa0314440 | AT4G00430.1 | 29.870 | 231 | 141 | 5 | 28 | 240 | 42 | 269 | 4.96e-20 | 87.8 |
| Msa0314440 | AT2G37170.2 | 28.755 | 233 | 145 | 6 | 37 | 248 | 78 | 310 | 1.04e-19 | 87.4 |
| Msa0314440 | AT2G37170.1 | 28.755 | 233 | 145 | 6 | 37 | 248 | 35 | 267 | 1.08e-19 | 86.7 |
| Msa0314440 | AT3G54820.1 | 27.612 | 268 | 159 | 8 | 13 | 248 | 4 | 268 | 2.91e-19 | 85.5 |
| Msa0314440 | AT1G01620.2 | 31.915 | 188 | 108 | 4 | 69 | 240 | 13 | 196 | 1.46e-18 | 82.4 |
| Msa0314440 | AT1G01620.1 | 29.817 | 218 | 130 | 5 | 42 | 240 | 55 | 268 | 1.73e-18 | 83.6 |
| Msa0314440 | AT2G37180.1 | 27.426 | 237 | 143 | 7 | 37 | 248 | 35 | 267 | 1.76e-18 | 83.6 |
| Msa0314440 | AT4G01470.1 | 29.741 | 232 | 151 | 4 | 38 | 257 | 20 | 251 | 1.87e-18 | 82.8 |
| Msa0314440 | AT3G61430.2 | 29.032 | 217 | 133 | 5 | 42 | 240 | 55 | 268 | 1.99e-18 | 83.2 |
| Msa0314440 | AT3G61430.1 | 29.032 | 217 | 133 | 5 | 42 | 240 | 55 | 268 | 1.99e-18 | 83.2 |
| Msa0314440 | AT3G53420.1 | 27.138 | 269 | 156 | 8 | 17 | 248 | 4 | 269 | 2.30e-18 | 83.2 |
| Msa0314440 | AT3G53420.2 | 27.138 | 269 | 156 | 8 | 17 | 248 | 4 | 269 | 2.30e-18 | 83.2 |
| Msa0314440 | AT4G23400.1 | 29.493 | 217 | 132 | 6 | 42 | 240 | 56 | 269 | 6.06e-18 | 82.0 |
| Msa0314440 | AT2G45960.1 | 27.706 | 231 | 146 | 5 | 28 | 240 | 41 | 268 | 3.70e-17 | 79.7 |
| Msa0314440 | AT2G45960.3 | 26.568 | 271 | 161 | 8 | 28 | 274 | 41 | 297 | 2.20e-15 | 75.1 |
| Msa0314440 | AT2G45960.2 | 27.962 | 211 | 134 | 4 | 28 | 223 | 41 | 248 | 2.77e-14 | 71.6 |
| Msa0314440 | AT3G47440.1 | 25.751 | 233 | 162 | 4 | 22 | 246 | 7 | 236 | 6.93e-14 | 70.1 |
Find 61 sgRNAs with CRISPR-Local
Find 216 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATTCTGTTGGTCACATTTC+TGG | 0.074867 | 2_4:-10180031 | Msa0314440:CDS |
| ACCATAATTATACAGGATTA+TGG | 0.226922 | 2_4:-10177771 | Msa0314440:CDS |
| ACCCTCAGACTTATATTTAA+TGG | 0.231339 | 2_4:-10179653 | Msa0314440:CDS |
| TCCTGGAATTGCATTTGCTT+GGG | 0.267287 | 2_4:-10180077 | Msa0314440:CDS |
| TATTTGATTGCACCAATTCT+AGG | 0.280076 | 2_4:-10177745 | Msa0314440:CDS |
| CTCTGTGCCCCTTCTCAAAA+AGG | 0.290172 | 2_4:-10180331 | Msa0314440:intron |
| TCCATAATCCTGTATAATTA+TGG | 0.291862 | 2_4:+10177770 | None:intergenic |
| ATCTTGGTGAGCTCAATCTT+AGG | 0.323061 | 2_4:+10177655 | None:intergenic |
| TGCTTGGGGATTCACTGTTA+TGG | 0.330467 | 2_4:-10180062 | Msa0314440:CDS |
| ATGAATCCAGCAAGGAGTTT+AGG | 0.360808 | 2_4:-10177808 | Msa0314440:CDS |
| TTCCTGGAATTGCATTTGCT+TGG | 0.369726 | 2_4:-10180078 | Msa0314440:CDS |
| GCAGGTCCTAAACTCCTTGC+TGG | 0.373011 | 2_4:+10177802 | None:intergenic |
| ATAATAGATATATTGTTTGC+GGG | 0.376379 | 2_4:-10178892 | Msa0314440:CDS |
| CCCCAAGCAAATGCAATTCC+AGG | 0.380656 | 2_4:+10180076 | None:intergenic |
| GATCATGTAGTAACACTTCC+TGG | 0.391987 | 2_4:-10180094 | Msa0314440:CDS |
| TTCATCGATGCTCCTGTCAT+TGG | 0.406249 | 2_4:+10177826 | None:intergenic |
| ACATACATGATGATATTTGC+AGG | 0.406323 | 2_4:-10180148 | Msa0314440:CDS |
| CCTAGCAAAGCTCCTAGAAT+TGG | 0.412209 | 2_4:+10177733 | None:intergenic |
| AAACATTACCGCTCTATTAT+CGG | 0.416254 | 2_4:+10179520 | None:intergenic |
| CCTGGAATTGCATTTGCTTG+GGG | 0.438227 | 2_4:-10180076 | Msa0314440:CDS |
| TTGCAGATTGGTGAATTAGC+TGG | 0.450684 | 2_4:-10178937 | Msa0314440:intron |
| ATTTCAACTCACTTGCTTGA+AGG | 0.459719 | 2_4:+10179955 | None:intergenic |
| TTTCAACTCACTTGCTTGAA+GGG | 0.467082 | 2_4:+10179956 | None:intergenic |
| CTGCAGTAATTACAAACATA+AGG | 0.467928 | 2_4:+10179549 | None:intergenic |
| AATTAGCTGGACTTGCGATT+GGG | 0.471618 | 2_4:-10178924 | Msa0314440:CDS |
| GAATTAGCTGGACTTGCGAT+TGG | 0.472494 | 2_4:-10178925 | Msa0314440:CDS |
| AATAATAGATATATTGTTTG+CGG | 0.478293 | 2_4:-10178893 | Msa0314440:CDS |
| ACCTGCTCCTTCTGAGGAAA+GGG | 0.479226 | 2_4:+10177629 | None:intergenic |
| GAGGGTTCCACTTGCTAATG+TGG | 0.479931 | 2_4:+10179670 | None:intergenic |
| TATATGATAGCTCAGGTCCT+TGG | 0.491184 | 2_4:-10179695 | Msa0314440:CDS |
| TCAGAAAACAATGAAGAGTC+AGG | 0.495664 | 2_4:-10180363 | Msa0314440:CDS |
| GCAAAAGCAATGGTAACAGC+AGG | 0.496624 | 2_4:+10179995 | None:intergenic |
| TCTGAGGAAAGGGACAATCT+TGG | 0.500492 | 2_4:+10177639 | None:intergenic |
| TAGGAGCTTTGCTAGGTACA+TGG | 0.502318 | 2_4:-10177726 | Msa0314440:CDS |
| ACCTGAGCTATCATATAAGC+TGG | 0.513440 | 2_4:+10179701 | None:intergenic |
| TCCCTTTCCTCAGAAGGAGC+AGG | 0.522202 | 2_4:-10177630 | Msa0314440:CDS |
| TTTATTGGAACACTTCCAGC+TGG | 0.523797 | 2_4:-10179617 | Msa0314440:CDS |
| TCTTGGTGAGCTCAATCTTA+GGG | 0.525478 | 2_4:+10177656 | None:intergenic |
| AGATTGTCCCTTTCCTCAGA+AGG | 0.528762 | 2_4:-10177636 | Msa0314440:CDS |
| ACCATTAAATATAAGTCTGA+GGG | 0.536139 | 2_4:+10179652 | None:intergenic |
| CACCATTAAATATAAGTCTG+AGG | 0.544607 | 2_4:+10179651 | None:intergenic |
| GCTTGCAAGTTAGAACCAGC+TGG | 0.544915 | 2_4:+10179602 | None:intergenic |
| AATATAGTTGGTAGCAGAAG+TGG | 0.548823 | 2_4:-10180176 | Msa0314440:intron |
| ACCAGCTTATATGATAGCTC+AGG | 0.564135 | 2_4:-10179702 | Msa0314440:CDS |
| CCAATTCTAGGAGCTTTGCT+AGG | 0.564730 | 2_4:-10177733 | Msa0314440:CDS |
| ATAGTTGGTAGCAGAAGTGG+TGG | 0.567543 | 2_4:-10180173 | Msa0314440:intron |
| CACTTGCTAATGTGGATCCA+AGG | 0.576613 | 2_4:+10179678 | None:intergenic |
| TAATAGATATATTGTTTGCG+GGG | 0.592041 | 2_4:-10178891 | Msa0314440:intron |
| CTTGAAGGGAAATCTTCTAG+TGG | 0.592191 | 2_4:+10179970 | None:intergenic |
| GCTACGACCTGCTCCTTCTG+AGG | 0.600095 | 2_4:+10177623 | None:intergenic |
| AAGCAATGAAATTCATCATG+AGG | 0.601214 | 2_4:-10180412 | Msa0314440:CDS |
| GACCTGCTCCTTCTGAGGAA+AGG | 0.601572 | 2_4:+10177628 | None:intergenic |
| TCTAGTGGAAGCAAAAGCAA+TGG | 0.634655 | 2_4:+10179985 | None:intergenic |
| CATACATGATGATATTTGCA+GGG | 0.634898 | 2_4:-10180147 | Msa0314440:CDS |
| CTTGGATCCACATTAGCAAG+TGG | 0.643702 | 2_4:-10179677 | Msa0314440:CDS |
| CATTACCGCTCTATTATCGG+TGG | 0.651247 | 2_4:+10179523 | None:intergenic |
| CAAAAGCAATGGTAACAGCA+GGG | 0.665784 | 2_4:+10179996 | None:intergenic |
| TTAGGGAGCTCATCGCACGT+TGG | 0.679497 | 2_4:+10177673 | None:intergenic |
| GAGCATCGATGAATCCAGCA+AGG | 0.685272 | 2_4:-10177816 | Msa0314440:CDS |
| TAGTTGGTAGCAGAAGTGGT+GGG | 0.737512 | 2_4:-10180172 | Msa0314440:CDS |
| AGTAGCCACCGATAATAGAG+CGG | 0.741536 | 2_4:-10179528 | Msa0314440:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTGAAATTACAAAAAAAAAT+TGG | - | chr2_4:10177839-10177858 | Msa0314440:intron | 10.0% |
| !! | ATTATATTTGTTTAACAAAT+TGG | - | chr2_4:10178618-10178637 | Msa0314440:intron | 10.0% |
| !! | TTATATTTGTTTAACAAATT+GGG | - | chr2_4:10178619-10178638 | Msa0314440:intron | 10.0% |
| !!! | ACTTCTAATATTATTTTTTT+GGG | + | chr2_4:10178970-10178989 | None:intergenic | 10.0% |
| !!! | AACTTCTAATATTATTTTTT+TGG | + | chr2_4:10178971-10178990 | None:intergenic | 10.0% |
| !!! | AATAATTTTAAATTGTTTCA+TGG | - | chr2_4:10179048-10179067 | Msa0314440:intron | 10.0% |
| !! | ACTAAAAAATATATTCAATT+AGG | + | chr2_4:10179206-10179225 | None:intergenic | 10.0% |
| !! | TTTAAAAGTAAAAAATAAAC+GGG | + | chr2_4:10179686-10179705 | None:intergenic | 10.0% |
| !!! | TTGGTTATCTAAAATAAAAT+TGG | - | chr2_4:10178141-10178160 | Msa0314440:intron | 15.0% |
| !!! | TTATCTAAAATAAAATTGGA+AGG | - | chr2_4:10178145-10178164 | Msa0314440:intron | 15.0% |
| !!! | CTATTAATAATACTCTTTTA+GGG | + | chr2_4:10178229-10178248 | None:intergenic | 15.0% |
| !!! | TCTATTAATAATACTCTTTT+AGG | + | chr2_4:10178230-10178249 | None:intergenic | 15.0% |
| !! | TATATTTGTTTAACAAATTG+GGG | - | chr2_4:10178620-10178639 | Msa0314440:intron | 15.0% |
| !! | ATATAAGTTTAATCATAAGT+TGG | + | chr2_4:10178690-10178709 | None:intergenic | 15.0% |
| !! | AACTTATATAATGATATCTT+TGG | - | chr2_4:10178701-10178720 | Msa0314440:intron | 15.0% |
| !! | ACTTATATAATGATATCTTT+GGG | - | chr2_4:10178702-10178721 | Msa0314440:intron | 15.0% |
| !!! | TTTTTTTTTTTTTTGCAGAT+TGG | - | chr2_4:10179104-10179123 | Msa0314440:intron | 15.0% |
| !! | AATAATAGATATATTGTTTG+CGG | - | chr2_4:10179160-10179179 | Msa0314440:intron | 15.0% |
| !! | ATCAAATTAAATAGCAATAA+TGG | - | chr2_4:10179997-10180016 | Msa0314440:CDS | 15.0% |
| !! | TCAAATTAAATAGCAATAAT+GGG | - | chr2_4:10179998-10180017 | Msa0314440:CDS | 15.0% |
| !!! | TTTTTATACCATAATTATAC+AGG | - | chr2_4:10180275-10180294 | Msa0314440:intron | 15.0% |
| !! | AAAAGAGACTAAAAACTTAA+GGG | + | chr2_4:10177777-10177796 | None:intergenic | 20.0% |
| !! | AAAAAGAGACTAAAAACTTA+AGG | + | chr2_4:10177778-10177797 | None:intergenic | 20.0% |
| !!! | TTAAGTTTTTAGTCTCTTTT+TGG | - | chr2_4:10177777-10177796 | Msa0314440:CDS | 20.0% |
| !!! | CAAAAAAAAATTGGTTTTGT+TGG | - | chr2_4:10177848-10177867 | Msa0314440:intron | 20.0% |
| !! | TAATAATTAAAACATGCATG+TGG | - | chr2_4:10178173-10178192 | Msa0314440:intron | 20.0% |
| !!! | ATTCATTTTAACTTTGTTGA+AGG | - | chr2_4:10178327-10178346 | Msa0314440:intron | 20.0% |
| !! | TCTACTCTTACTAAATAAAT+TGG | - | chr2_4:10178556-10178575 | Msa0314440:intron | 20.0% |
| !! | TATATAAAATGTTGTCATGT+TGG | - | chr2_4:10178856-10178875 | Msa0314440:intron | 20.0% |
| !! | ATAATAGATATATTGTTTGC+GGG | - | chr2_4:10179161-10179180 | Msa0314440:intron | 20.0% |
| !!! | TAAGCAAAAATTCACTTTTT+AGG | - | chr2_4:10179423-10179442 | Msa0314440:intron | 20.0% |
| !!! | AATATATAACTCTTTTGTAG+AGG | - | chr2_4:10179552-10179571 | Msa0314440:CDS | 20.0% |
| !!! | ATGTTTTAGCAAAAAAATAG+TGG | + | chr2_4:10179753-10179772 | None:intergenic | 20.0% |
| !! | TAATTATGGTATAAAAAAGC+AGG | + | chr2_4:10180272-10180291 | None:intergenic | 20.0% |
| !!! | AAAAGTTACCTTTTTGAGAA+GGG | + | chr2_4:10177733-10177752 | None:intergenic | 25.0% |
| ! | TGTTGGATATTGAATATAGT+TGG | - | chr2_4:10177865-10177884 | Msa0314440:intron | 25.0% |
| !!! | ATGGTTTTGATTTATTCTGT+TGG | - | chr2_4:10178010-10178029 | Msa0314440:intron | 25.0% |
| !!! | TCTTTTAGGGTAATTACTAA+TGG | + | chr2_4:10178216-10178235 | None:intergenic | 25.0% |
| ! | ACCATTAAATATAAGTCTGA+GGG | + | chr2_4:10178404-10178423 | None:intergenic | 25.0% |
| !! | ATCTTTGGGAATAAACTAAT+TGG | - | chr2_4:10178716-10178735 | Msa0314440:intron | 25.0% |
| ! | GAATTTCTTCAAAATAGTAG+TGG | - | chr2_4:10178741-10178760 | Msa0314440:intron | 25.0% |
| ! | TAATAGATATATTGTTTGCG+GGG | - | chr2_4:10179162-10179181 | Msa0314440:intron | 25.0% |
| !! | TTTTTGCTTATATTTGTGAC+CGG | + | chr2_4:10179522-10179541 | None:intergenic | 25.0% |
| ! | CATTCAATATATGATGTATG+TGG | - | chr2_4:10179448-10179467 | Msa0314440:intron | 25.0% |
| ! | CATTCAATAAATGATGTATG+TGG | + | chr2_4:10179487-10179506 | None:intergenic | 25.0% |
| !! | TTTTTGCTTATATTTGTGAC+CGG | - | chr2_4:10179522-10179541 | Msa0314440:intron | 25.0% |
| ! | TTTGCTAAAACATGATTAGA+TGG | - | chr2_4:10179760-10179779 | Msa0314440:intron | 25.0% |
| ! | CATTTAGCCCATAAAAAATT+GGG | + | chr2_4:10180038-10180057 | None:intergenic | 25.0% |
| !!! | CAATTTTTTATGGGCTAAAT+GGG | - | chr2_4:10180037-10180056 | Msa0314440:CDS | 25.0% |
| !! | AAAAAAACGAGTGTGTTTTT+GGG | - | chr2_4:10180068-10180087 | Msa0314440:CDS | 25.0% |
| ! | ACCATAATTATACAGGATTA+TGG | - | chr2_4:10180282-10180301 | Msa0314440:intron | 25.0% |
| ! | TCCATAATCCTGTATAATTA+TGG | + | chr2_4:10180286-10180305 | None:intergenic | 25.0% |
| AAGCAATGAAATTCATCATG+AGG | - | chr2_4:10177641-10177660 | Msa0314440:CDS | 30.0% | |
| !! | AAAGTTACCTTTTTGAGAAG+GGG | + | chr2_4:10177732-10177751 | None:intergenic | 30.0% |
| !! | GAAAAGTTACCTTTTTGAGA+AGG | + | chr2_4:10177734-10177753 | None:intergenic | 30.0% |
| ACATACATGATGATATTTGC+AGG | - | chr2_4:10177905-10177924 | Msa0314440:intron | 30.0% | |
| CATACATGATGATATTTGCA+GGG | - | chr2_4:10177906-10177925 | Msa0314440:intron | 30.0% | |
| CATCTTATGCAATATGCATT+TGG | - | chr2_4:10178122-10178141 | Msa0314440:intron | 30.0% | |
| ACCCTCAGACTTATATTTAA+TGG | - | chr2_4:10178400-10178419 | Msa0314440:intron | 30.0% | |
| CACCATTAAATATAAGTCTG+AGG | + | chr2_4:10178405-10178424 | None:intergenic | 30.0% | |
| ! | GGTGAAGATGATCATTTTAT+TGG | - | chr2_4:10178421-10178440 | Msa0314440:intron | 30.0% |
| CTGCAGTAATTACAAACATA+AGG | + | chr2_4:10178507-10178526 | None:intergenic | 30.0% | |
| AAACATTACCGCTCTATTAT+CGG | + | chr2_4:10178536-10178555 | None:intergenic | 30.0% | |
| ! | TTATTTGTTCCAACGACTTT+TGG | - | chr2_4:10178919-10178938 | Msa0314440:CDS | 30.0% |
| AATTTCATTCCAAAAGTCGT+TGG | + | chr2_4:10178931-10178950 | None:intergenic | 30.0% | |
| !!! | CTTCACTTTTTTCAAAACCA+CGG | - | chr2_4:10179259-10179278 | Msa0314440:intron | 30.0% |
| ! | TTTGGAGCTTCATAAAATCA+CGG | - | chr2_4:10179312-10179331 | Msa0314440:intron | 30.0% |
| ! | ATCTGTAGCCCAATTTTAAA+TGG | + | chr2_4:10179646-10179665 | None:intergenic | 30.0% |
| AAAGTAAAAAATAAACGGGC+CGG | + | chr2_4:10179682-10179701 | None:intergenic | 30.0% | |
| CCATTTAGCCCATAAAAAAT+TGG | + | chr2_4:10180039-10180058 | None:intergenic | 30.0% | |
| !!! | CCAATTTTTTATGGGCTAAA+TGG | - | chr2_4:10180036-10180055 | Msa0314440:CDS | 30.0% |
| !!! | CAAAAACACACTCGTTTTTT+TGG | + | chr2_4:10180069-10180088 | None:intergenic | 30.0% |
| ! | CAAAAAAACGAGTGTGTTTT+TGG | - | chr2_4:10180067-10180086 | Msa0314440:CDS | 30.0% |
| ! | ATATTTTACAGACCAATGAC+AGG | - | chr2_4:10180215-10180234 | Msa0314440:intron | 30.0% |
| TATTTGATTGCACCAATTCT+AGG | - | chr2_4:10180308-10180327 | Msa0314440:intron | 30.0% | |
| ! | TGACTCTTCATTGTTTTCTG+AGG | + | chr2_4:10177691-10177710 | None:intergenic | 35.0% |
| TCAGAAAACAATGAAGAGTC+AGG | - | chr2_4:10177690-10177709 | Msa0314440:CDS | 35.0% | |
| ! | CTTTTCTTTCCTTCTCTAGA+AGG | - | chr2_4:10177748-10177767 | Msa0314440:CDS | 35.0% |
| !! | AATATAGTTGGTAGCAGAAG+TGG | - | chr2_4:10177877-10177896 | Msa0314440:intron | 35.0% |
| TATTCTGTTGGTCACATTTC+TGG | - | chr2_4:10178022-10178041 | Msa0314440:intron | 35.0% | |
| TTTCAACTCACTTGCTTGAA+GGG | + | chr2_4:10178100-10178119 | None:intergenic | 35.0% | |
| ATTTCAACTCACTTGCTTGA+AGG | + | chr2_4:10178101-10178120 | None:intergenic | 35.0% | |
| TTGAAACTGAAACCATGAGT+TGG | + | chr2_4:10178276-10178295 | None:intergenic | 35.0% | |
| !!! | ATTATATGTTTTGACGCGCA+TGG | + | chr2_4:10179022-10179041 | None:intergenic | 35.0% |
| !!! | ACTTTTTTCAAAACCACGGT+AGG | - | chr2_4:10179263-10179282 | Msa0314440:intron | 35.0% |
| ! | GATTTTATGAAGCTCCAAAG+TGG | + | chr2_4:10179311-10179330 | None:intergenic | 35.0% |
| GAGTTATATATTACACCCTC+CGG | + | chr2_4:10179544-10179563 | None:intergenic | 35.0% | |
| !!! | TCTTTTGTAGAGGTGTCAAA+TGG | - | chr2_4:10179562-10179581 | Msa0314440:CDS | 35.0% |
| !!! | CTTTTGTAGAGGTGTCAAAT+GGG | - | chr2_4:10179563-10179582 | Msa0314440:CDS | 35.0% |
| !! | AGCCCAATTTTAAATGGACT+GGG | + | chr2_4:10179640-10179659 | None:intergenic | 35.0% |
| ! | TAGCCCAATTTTAAATGGAC+TGG | + | chr2_4:10179641-10179660 | None:intergenic | 35.0% |
| AAGTAAAAAATAAACGGGCC+GGG | + | chr2_4:10179681-10179700 | None:intergenic | 35.0% | |
| !!! | TGTTTTTGGGCTAGTTTTTG+AGG | - | chr2_4:10180081-10180100 | Msa0314440:CDS | 35.0% |
| AGAGTAGAGCTGTCAAAAAT+GGG | + | chr2_4:10180151-10180170 | None:intergenic | 35.0% | |
| AAGAGTAGAGCTGTCAAAAA+TGG | + | chr2_4:10180152-10180171 | None:intergenic | 35.0% | |
| ! | TTTTGACAGCTCTACTCTTT+TGG | - | chr2_4:10180153-10180172 | Msa0314440:CDS | 35.0% |
| GATCATGTAGTAACACTTCC+TGG | - | chr2_4:10177959-10177978 | Msa0314440:intron | 40.0% | |
| TTCCTGGAATTGCATTTGCT+TGG | - | chr2_4:10177975-10177994 | Msa0314440:intron | 40.0% | |
| TCCTGGAATTGCATTTGCTT+GGG | - | chr2_4:10177976-10177995 | Msa0314440:intron | 40.0% | |
| CAAAAGCAATGGTAACAGCA+GGG | + | chr2_4:10178060-10178079 | None:intergenic | 40.0% | |
| TCTAGTGGAAGCAAAAGCAA+TGG | + | chr2_4:10178071-10178090 | None:intergenic | 40.0% | |
| CTTGAAGGGAAATCTTCTAG+TGG | + | chr2_4:10178086-10178105 | None:intergenic | 40.0% | |
| CATGCATGTGGATGATAAGT+TGG | - | chr2_4:10178185-10178204 | Msa0314440:intron | 40.0% | |
| CATTCTTCTGAACCAACTCA+TGG | - | chr2_4:10178261-10178280 | Msa0314440:intron | 40.0% | |
| ACCAGCTTATATGATAGCTC+AGG | - | chr2_4:10178351-10178370 | Msa0314440:intron | 40.0% | |
| ACCTGAGCTATCATATAAGC+TGG | + | chr2_4:10178355-10178374 | None:intergenic | 40.0% | |
| TATATGATAGCTCAGGTCCT+TGG | - | chr2_4:10178358-10178377 | Msa0314440:intron | 40.0% | |
| TTTATTGGAACACTTCCAGC+TGG | - | chr2_4:10178436-10178455 | Msa0314440:intron | 40.0% | |
| TACATAGATGACACTCTGCA+GGG | + | chr2_4:10178894-10178913 | None:intergenic | 40.0% | |
| TTGCAGATTGGTGAATTAGC+TGG | - | chr2_4:10179116-10179135 | Msa0314440:intron | 40.0% | |
| AATTAGCTGGACTTGCGATT+GGG | - | chr2_4:10179129-10179148 | Msa0314440:intron | 40.0% | |
| TTGTACACTTAGCGTGTGTT+TGG | - | chr2_4:10179231-10179250 | Msa0314440:intron | 40.0% | |
| AAAACCACGGTAGGAAATCA+CGG | - | chr2_4:10179272-10179291 | Msa0314440:intron | 40.0% | |
| GAGCTTCATAAAATCACGGT+AGG | - | chr2_4:10179316-10179335 | Msa0314440:intron | 40.0% | |
| TGCTTATATTTGTGACCGGA+GGG | + | chr2_4:10179526-10179545 | None:intergenic | 40.0% | |
| TTGCTTATATTTGTGACCGG+AGG | + | chr2_4:10179525-10179544 | None:intergenic | 40.0% | |
| TTGCTTATATTTGTGACCGG+AGG | - | chr2_4:10179525-10179544 | Msa0314440:intron | 40.0% | |
| TGCTTATATTTGTGACCGGA+GGG | - | chr2_4:10179526-10179545 | Msa0314440:intron | 40.0% | |
| AGAGGTCCGACTACATAAAT+GGG | - | chr2_4:10179605-10179624 | Msa0314440:CDS | 40.0% | |
| !!! | AATTTTAAATGGACTGGGCC+GGG | + | chr2_4:10179635-10179654 | None:intergenic | 40.0% |
| !!! | CAATTTTAAATGGACTGGGC+CGG | + | chr2_4:10179636-10179655 | None:intergenic | 40.0% |
| ! | GGCCCAGTCCATTTAAAATT+GGG | - | chr2_4:10179635-10179654 | Msa0314440:CDS | 40.0% |
| TAGCCCATAAAAAATTGGGC+CGG | + | chr2_4:10180034-10180053 | None:intergenic | 40.0% | |
| !! | TTTTATGGGCTAAATGGGCT+TGG | - | chr2_4:10180042-10180061 | Msa0314440:CDS | 40.0% |
| ! | TTTATGGGCTAAATGGGCTT+GGG | - | chr2_4:10180043-10180062 | Msa0314440:CDS | 40.0% |
| ! | ATTAGCCCAAAATTTTGGGC+CGG | + | chr2_4:10180108-10180127 | None:intergenic | 40.0% |
| ! | GCCCAAAATTTTGGGCTAAT+GGG | - | chr2_4:10180108-10180127 | Msa0314440:CDS | 40.0% |
| ! | GCCCATTAGCCCAAAATTTT+GGG | + | chr2_4:10180112-10180131 | None:intergenic | 40.0% |
| !! | AAAATTTTGGGCTAATGGGC+CGG | - | chr2_4:10180112-10180131 | Msa0314440:CDS | 40.0% |
| !! | CAAAAATGGGCTGGGTTAAT+GGG | + | chr2_4:10180138-10180157 | None:intergenic | 40.0% |
| !! | TCAAAAATGGGCTGGGTTAA+TGG | + | chr2_4:10180139-10180158 | None:intergenic | 40.0% |
| ATGAATCCAGCAAGGAGTTT+AGG | - | chr2_4:10180245-10180264 | Msa0314440:intron | 40.0% | |
| TCTTGGTGAGCTCAATCTTA+GGG | + | chr2_4:10180400-10180419 | None:intergenic | 40.0% | |
| ATCTTGGTGAGCTCAATCTT+AGG | + | chr2_4:10180401-10180420 | None:intergenic | 40.0% | |
| ! | TAAGGGATGCCTTCTAGAGA+AGG | + | chr2_4:10177760-10177779 | None:intergenic | 45.0% |
| !! | ATAGTTGGTAGCAGAAGTGG+TGG | - | chr2_4:10177880-10177899 | Msa0314440:intron | 45.0% |
| !! | TAGTTGGTAGCAGAAGTGGT+GGG | - | chr2_4:10177881-10177900 | Msa0314440:intron | 45.0% |
| CCTGGAATTGCATTTGCTTG+GGG | - | chr2_4:10177977-10177996 | Msa0314440:intron | 45.0% | |
| TGCTTGGGGATTCACTGTTA+TGG | - | chr2_4:10177991-10178010 | Msa0314440:intron | 45.0% | |
| GCAAAAGCAATGGTAACAGC+AGG | + | chr2_4:10178061-10178080 | None:intergenic | 45.0% | |
| ! | CACTTGCTAATGTGGATCCA+AGG | + | chr2_4:10178378-10178397 | None:intergenic | 45.0% |
| CTTGGATCCACATTAGCAAG+TGG | - | chr2_4:10178376-10178395 | Msa0314440:intron | 45.0% | |
| AGTAGCCACCGATAATAGAG+CGG | - | chr2_4:10178525-10178544 | Msa0314440:intron | 45.0% | |
| CATTACCGCTCTATTATCGG+TGG | + | chr2_4:10178533-10178552 | None:intergenic | 45.0% | |
| CTACATAGATGACACTCTGC+AGG | + | chr2_4:10178895-10178914 | None:intergenic | 45.0% | |
| GAATTAGCTGGACTTGCGAT+TGG | - | chr2_4:10179128-10179147 | Msa0314440:intron | 45.0% | |
| ACACTTAGCGTGTGTTTGGA+AGG | - | chr2_4:10179235-10179254 | Msa0314440:intron | 45.0% | |
| CACTTAGCGTGTGTTTGGAA+GGG | - | chr2_4:10179236-10179255 | Msa0314440:intron | 45.0% | |
| ! | AGCTCCAAAGTGGAGCTTTT+GGG | + | chr2_4:10179301-10179320 | None:intergenic | 45.0% |
| ! | AAGCTCCAAAGTGGAGCTTT+TGG | + | chr2_4:10179302-10179321 | None:intergenic | 45.0% |
| AGTTTACAGCCCCAAAAGCA+CGG | + | chr2_4:10179364-10179383 | None:intergenic | 45.0% | |
| !!! | TGCTTTTGGGGCTGTAAACT+CGG | - | chr2_4:10179364-10179383 | Msa0314440:intron | 45.0% |
| AAACACACACATACACCCTC+CGG | - | chr2_4:10179391-10179410 | Msa0314440:intron | 45.0% | |
| GAGAGGTCCGACTACATAAA+TGG | - | chr2_4:10179604-10179623 | Msa0314440:CDS | 45.0% | |
| ! | CGGCCCAGTCCATTTAAAAT+TGG | - | chr2_4:10179634-10179653 | Msa0314440:CDS | 45.0% |
| AGCCCATAAAAAATTGGGCC+GGG | + | chr2_4:10180033-10180052 | None:intergenic | 45.0% | |
| ! | TTAGCCCAAAATTTTGGGCC+GGG | + | chr2_4:10180107-10180126 | None:intergenic | 45.0% |
| ! | GGCCCAAAATTTTGGGCTAA+TGG | - | chr2_4:10180107-10180126 | Msa0314440:CDS | 45.0% |
| ! | GGCCCATTAGCCCAAAATTT+TGG | + | chr2_4:10180113-10180132 | None:intergenic | 45.0% |
| ! | AGAGCTGTCAAAAATGGGCT+GGG | + | chr2_4:10180146-10180165 | None:intergenic | 45.0% |
| TAGAGCTGTCAAAAATGGGC+TGG | + | chr2_4:10180147-10180166 | None:intergenic | 45.0% | |
| TTCATCGATGCTCCTGTCAT+TGG | + | chr2_4:10180230-10180249 | None:intergenic | 45.0% | |
| CCTAGCAAAGCTCCTAGAAT+TGG | + | chr2_4:10180323-10180342 | None:intergenic | 45.0% | |
| ! | CCAATTCTAGGAGCTTTGCT+AGG | - | chr2_4:10180320-10180339 | Msa0314440:intron | 45.0% |
| TAGGAGCTTTGCTAGGTACA+TGG | - | chr2_4:10180327-10180346 | Msa0314440:intron | 45.0% | |
| TCTGAGGAAAGGGACAATCT+TGG | + | chr2_4:10180417-10180436 | None:intergenic | 45.0% | |
| AGATTGTCCCTTTCCTCAGA+AGG | - | chr2_4:10180417-10180436 | Msa0314440:CDS | 45.0% | |
| !!! | TTTGATTAAATATTTTTTAT+TGG | - | chr2_4:10178651-10178670 | Msa0314440:intron | 5.0% |
| !!! | TTTTAAAAGTAAAAAATAAA+CGG | + | chr2_4:10179687-10179706 | None:intergenic | 5.0% |
| CTCTGTGCCCCTTCTCAAAA+AGG | - | chr2_4:10177722-10177741 | Msa0314440:CDS | 50.0% | |
| CCCCAAGCAAATGCAATTCC+AGG | + | chr2_4:10177980-10177999 | None:intergenic | 50.0% | |
| ! | GAGGGTTCCACTTGCTAATG+TGG | + | chr2_4:10178386-10178405 | None:intergenic | 50.0% |
| GCTTGCAAGTTAGAACCAGC+TGG | + | chr2_4:10178454-10178473 | None:intergenic | 50.0% | |
| ! | GGAGGGTGTATGTGTGTGTT+TGG | + | chr2_4:10179392-10179411 | None:intergenic | 50.0% |
| !! | TGTAGAGGTGTCAAATGGGC+TGG | - | chr2_4:10179567-10179586 | Msa0314440:CDS | 50.0% |
| ! | GGCTGGCCCATTTATGTAGT+CGG | + | chr2_4:10179614-10179633 | None:intergenic | 50.0% |
| ACTACATAAATGGGCCAGCC+CGG | - | chr2_4:10179614-10179633 | Msa0314440:CDS | 50.0% | |
| GGGCTACAGATTCTATGACC+CGG | - | chr2_4:10179655-10179674 | Msa0314440:CDS | 50.0% | |
| AAAAAATAAACGGGCCGGGC+CGG | + | chr2_4:10179677-10179696 | None:intergenic | 50.0% | |
| !! | ATAGCAATAATGGGCCAGCC+CGG | - | chr2_4:10180007-10180026 | Msa0314440:CDS | 50.0% |
| ATAAAAAATTGGGCCGGGCC+GGG | + | chr2_4:10180028-10180047 | None:intergenic | 50.0% | |
| CATAAAAAATTGGGCCGGGC+CGG | + | chr2_4:10180029-10180048 | None:intergenic | 50.0% | |
| !!! | GGCCCGGCCCAATTTTTTAT+GGG | - | chr2_4:10180028-10180047 | Msa0314440:CDS | 50.0% |
| !!! | TTGGGCTAGTTTTTGAGGCC+CGG | - | chr2_4:10180086-10180105 | Msa0314440:CDS | 50.0% |
| !! | GAGCATCGATGAATCCAGCA+AGG | - | chr2_4:10180237-10180256 | Msa0314440:intron | 50.0% |
| ! | ACCTGCTCCTTCTGAGGAAA+GGG | + | chr2_4:10180427-10180446 | None:intergenic | 50.0% |
| CGCATGGCATGTGATTGCGT+AGG | + | chr2_4:10179006-10179025 | None:intergenic | 55.0% | |
| ACCACGGTAGGAAATCACGG+TGG | - | chr2_4:10179275-10179294 | Msa0314440:intron | 55.0% | |
| GTGGCCCAAAAGCTCCACTT+TGG | - | chr2_4:10179294-10179313 | Msa0314440:intron | 55.0% | |
| ! | AATCACGCCCACCGTGCTTT+TGG | - | chr2_4:10179350-10179369 | Msa0314440:intron | 55.0% |
| ! | ATCACGCCCACCGTGCTTTT+GGG | - | chr2_4:10179351-10179370 | Msa0314440:intron | 55.0% |
| ! | TACAGCCCCAAAAGCACGGT+GGG | + | chr2_4:10179360-10179379 | None:intergenic | 55.0% |
| ! | TTACAGCCCCAAAAGCACGG+TGG | + | chr2_4:10179361-10179380 | None:intergenic | 55.0% |
| ACAGATTCTATGACCCGGCC+CGG | - | chr2_4:10179660-10179679 | Msa0314440:CDS | 55.0% | |
| AAAAATAAACGGGCCGGGCC+GGG | + | chr2_4:10179676-10179695 | None:intergenic | 55.0% | |
| !!! | CGGCCCGGCCCAATTTTTTA+TGG | - | chr2_4:10180027-10180046 | Msa0314440:CDS | 55.0% |
| ! | TGAGGCCCGGCCCAAAATTT+TGG | - | chr2_4:10180099-10180118 | Msa0314440:CDS | 55.0% |
| ! | GAGGCCCGGCCCAAAATTTT+GGG | - | chr2_4:10180100-10180119 | Msa0314440:CDS | 55.0% |
| !! | AATGGGCTGGGTTAATGGGC+CGG | + | chr2_4:10180134-10180153 | None:intergenic | 55.0% |
| GCAGGTCCTAAACTCCTTGC+TGG | + | chr2_4:10180254-10180273 | None:intergenic | 55.0% | |
| TTAGGGAGCTCATCGCACGT+TGG | + | chr2_4:10180383-10180402 | None:intergenic | 55.0% | |
| TCCCTTTCCTCAGAAGGAGC+AGG | - | chr2_4:10180423-10180442 | Msa0314440:CDS | 55.0% | |
| ! | GACCTGCTCCTTCTGAGGAA+AGG | + | chr2_4:10180428-10180447 | None:intergenic | 55.0% |
| GCCACCGTGATTTCCTACCG+TGG | + | chr2_4:10179279-10179298 | None:intergenic | 60.0% | |
| ! | TCACGCCCACCGTGCTTTTG+GGG | - | chr2_4:10179352-10179371 | Msa0314440:intron | 60.0% |
| !! | AGGTGTCAAATGGGCTGGCC+CGG | - | chr2_4:10179572-10179591 | Msa0314440:CDS | 60.0% |
| !! | TTAAATGGACTGGGCCGGGC+TGG | + | chr2_4:10179631-10179650 | None:intergenic | 60.0% |
| TAGTCGGACCTCTCGAGCCC+GGG | + | chr2_4:10179598-10179617 | None:intergenic | 65.0% | |
| GTAGTCGGACCTCTCGAGCC+CGG | + | chr2_4:10179599-10179618 | None:intergenic | 65.0% | |
| !! | AATAATGGGCCAGCCCGGCC+CGG | - | chr2_4:10180012-10180031 | Msa0314440:CDS | 65.0% |
| !! | TCAAATGGGCTGGCCCGGCC+CGG | - | chr2_4:10179577-10179596 | Msa0314440:CDS | 70.0% |
| AAAATTGGGCCGGGCCGGGC+TGG | + | chr2_4:10180024-10180043 | None:intergenic | 70.0% | |
| !! | CAAATGGGCTGGCCCGGCCC+GGG | - | chr2_4:10179578-10179597 | Msa0314440:CDS | 75.0% |
| ! | GGACCTCTCGAGCCCGGGCC+GGG | + | chr2_4:10179593-10179612 | None:intergenic | 80.0% |
| ! | CGGACCTCTCGAGCCCGGGC+CGG | + | chr2_4:10179594-10179613 | None:intergenic | 80.0% |
| ! | TGGCCCGGCCCGGGCTCGAG+AGG | - | chr2_4:10179587-10179606 | Msa0314440:CDS | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 10177624 | 10180451 | 10177624 | ID=Msa0314440;Name=Msa0314440 |
| chr2_4 | mRNA | 10177624 | 10180451 | 10177624 | ID=Msa0314440-mRNA-1;Parent=Msa0314440;Name=Msa0314440-mRNA-1;_AED=0.43;_eAED=0.43;_QI=0|0|0|1|1|1|5|0|276 |
| chr2_4 | exon | 10180332 | 10180451 | 10180332 | ID=Msa0314440-mRNA-1:exon:3973;Parent=Msa0314440-mRNA-1 |
| chr2_4 | exon | 10179967 | 10180191 | 10179967 | ID=Msa0314440-mRNA-1:exon:3972;Parent=Msa0314440-mRNA-1 |
| chr2_4 | exon | 10179529 | 10179726 | 10179529 | ID=Msa0314440-mRNA-1:exon:3971;Parent=Msa0314440-mRNA-1 |
| chr2_4 | exon | 10178892 | 10178953 | 10178892 | ID=Msa0314440-mRNA-1:exon:3970;Parent=Msa0314440-mRNA-1 |
| chr2_4 | exon | 10177624 | 10177849 | 10177624 | ID=Msa0314440-mRNA-1:exon:3969;Parent=Msa0314440-mRNA-1 |
| chr2_4 | CDS | 10180332 | 10180451 | 10180332 | ID=Msa0314440-mRNA-1:cds;Parent=Msa0314440-mRNA-1 |
| chr2_4 | CDS | 10179967 | 10180191 | 10179967 | ID=Msa0314440-mRNA-1:cds;Parent=Msa0314440-mRNA-1 |
| chr2_4 | CDS | 10179529 | 10179726 | 10179529 | ID=Msa0314440-mRNA-1:cds;Parent=Msa0314440-mRNA-1 |
| chr2_4 | CDS | 10178892 | 10178953 | 10178892 | ID=Msa0314440-mRNA-1:cds;Parent=Msa0314440-mRNA-1 |
| chr2_4 | CDS | 10177624 | 10177849 | 10177624 | ID=Msa0314440-mRNA-1:cds;Parent=Msa0314440-mRNA-1 |
| Gene Sequence |
| Protein sequence |
