Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0176060 | AFK33775.1 | 88.321 | 274 | 18 | 2 | 1 | 260 | 38 | 311 | 6.55e-166 | 471 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0176060 | I3S0I3 | 88.321 | 274 | 18 | 2 | 1 | 260 | 38 | 311 | 3.13e-166 | 471 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003080 | Msa0176060 | 0.865156 | 7.245658e-65 | -8.615850e-47 |
| Msa0005020 | Msa0176060 | 0.804007 | 2.655486e-49 | -8.615850e-47 |
| Msa0014770 | Msa0176060 | 0.833799 | 4.333585e-56 | -8.615850e-47 |
| Msa0015570 | Msa0176060 | 0.832925 | 7.154807e-56 | -8.615850e-47 |
| Msa0017670 | Msa0176060 | 0.821076 | 4.893718e-53 | -8.615850e-47 |
| Msa0019930 | Msa0176060 | 0.806719 | 7.176738e-50 | -8.615850e-47 |
| Msa0025160 | Msa0176060 | 0.878002 | 3.993113e-69 | -8.615850e-47 |
| Msa0025580 | Msa0176060 | 0.828290 | 9.759391e-55 | -8.615850e-47 |
| Msa0032460 | Msa0176060 | 0.841675 | 4.115149e-58 | -8.615850e-47 |
| Msa0032980 | Msa0176060 | 0.813516 | 2.460213e-51 | -8.615850e-47 |
| Msa0034210 | Msa0176060 | 0.824194 | 9.210005e-54 | -8.615850e-47 |
| Msa0035270 | Msa0176060 | 0.904518 | 1.128771e-79 | -8.615850e-47 |
| Msa0035340 | Msa0176060 | 0.904658 | 9.748000e-80 | -8.615850e-47 |
| Msa0035380 | Msa0176060 | 0.933566 | 1.542519e-95 | -8.615850e-47 |
| Msa0037740 | Msa0176060 | 0.814963 | 1.178642e-51 | -8.615850e-47 |
| Msa0042640 | Msa0176060 | 0.829999 | 3.759668e-55 | -8.615850e-47 |
| Msa0050660 | Msa0176060 | 0.849157 | 3.871895e-60 | -8.615850e-47 |
| Msa0050700 | Msa0176060 | 0.849776 | 2.603096e-60 | -8.615850e-47 |
| Msa0050790 | Msa0176060 | 0.842457 | 2.556213e-58 | -8.615850e-47 |
| Msa0053070 | Msa0176060 | 0.805906 | 1.064513e-49 | -8.615850e-47 |
| Msa0067060 | Msa0176060 | 0.826367 | 2.820848e-54 | -8.615850e-47 |
| Msa0072520 | Msa0176060 | 0.853905 | 1.753886e-61 | -8.615850e-47 |
| Msa0073120 | Msa0176060 | 0.825744 | 3.967130e-54 | -8.615850e-47 |
| Msa0075530 | Msa0176060 | 0.801796 | 7.602083e-49 | -8.615850e-47 |
| Msa0077560 | Msa0176060 | 0.822702 | 2.056502e-53 | -8.615850e-47 |
| Msa0091350 | Msa0176060 | 0.812072 | 5.094590e-51 | -8.615850e-47 |
| Msa0093860 | Msa0176060 | 0.820128 | 8.078552e-53 | -8.615850e-47 |
| Msa0094790 | Msa0176060 | 0.828109 | 1.079109e-54 | -8.615850e-47 |
| Msa0098040 | Msa0176060 | 0.803403 | 3.544552e-49 | -8.615850e-47 |
| Msa0098410 | Msa0176060 | 0.809315 | 2.010324e-50 | -8.615850e-47 |
| Msa0108630 | Msa0176060 | 0.826264 | 2.985075e-54 | -8.615850e-47 |
| Msa0113340 | Msa0176060 | 0.820203 | 7.766824e-53 | -8.615850e-47 |
| Msa0115550 | Msa0176060 | 0.802486 | 5.484053e-49 | -8.615850e-47 |
| Msa0121330 | Msa0176060 | 0.825325 | 4.984313e-54 | -8.615850e-47 |
| Msa0122330 | Msa0176060 | 0.805173 | 1.517094e-49 | -8.615850e-47 |
| Msa0123070 | Msa0176060 | 0.821014 | 5.056985e-53 | -8.615850e-47 |
| Msa0125360 | Msa0176060 | 0.806677 | 7.322537e-50 | -8.615850e-47 |
| Msa0126210 | Msa0176060 | 0.803360 | 3.618898e-49 | -8.615850e-47 |
| Msa0128310 | Msa0176060 | 0.814107 | 1.823038e-51 | -8.615850e-47 |
| Msa0129380 | Msa0176060 | 0.854383 | 1.277148e-61 | -8.615850e-47 |
| Msa0132700 | Msa0176060 | 0.801097 | 1.057291e-48 | -8.615850e-47 |
| Msa0140130 | Msa0176060 | 0.818959 | 1.492851e-52 | -8.615850e-47 |
| Msa0140280 | Msa0176060 | 0.819685 | 1.020004e-52 | -8.615850e-47 |
| Msa0140380 | Msa0176060 | 0.802514 | 5.410488e-49 | -8.615850e-47 |
| Msa0141640 | Msa0176060 | 0.811284 | 7.559478e-51 | -8.615850e-47 |
| Msa0143670 | Msa0176060 | 0.812861 | 3.426531e-51 | -8.615850e-47 |
| Msa0146650 | Msa0176060 | 0.869350 | 3.308265e-66 | -8.615850e-47 |
| Msa0154620 | Msa0176060 | 0.815080 | 1.110515e-51 | -8.615850e-47 |
| Msa0156050 | Msa0176060 | 0.833844 | 4.223610e-56 | -8.615850e-47 |
| Msa0156090 | Msa0176060 | 0.825463 | 4.624690e-54 | -8.615850e-47 |
| Msa0161930 | Msa0176060 | 0.836096 | 1.143107e-56 | -8.615850e-47 |
| Msa0165830 | Msa0176060 | 0.806786 | 6.944234e-50 | -8.615850e-47 |
| Msa0166170 | Msa0176060 | 0.800540 | 1.373933e-48 | -8.615850e-47 |
| Msa0168050 | Msa0176060 | 0.823098 | 1.662938e-53 | -8.615850e-47 |
| Msa0173290 | Msa0176060 | 0.807865 | 4.102252e-50 | -8.615850e-47 |
| Msa0174290 | Msa0176060 | 0.804195 | 2.427370e-49 | -8.615850e-47 |
| Msa0174440 | Msa0176060 | 0.821623 | 3.659050e-53 | -8.615850e-47 |
| Msa0176060 | Msa0185960 | 0.815758 | 7.846053e-52 | -8.615850e-47 |
| Msa0176060 | Msa0200050 | 0.811229 | 7.771131e-51 | -8.615850e-47 |
| Msa0176060 | Msa0203080 | 0.816678 | 4.885380e-52 | -8.615850e-47 |
| Msa0176060 | Msa0218020 | 0.838187 | 3.336897e-57 | -8.615850e-47 |
| Msa0176060 | Msa0230780 | 0.800251 | 1.573408e-48 | -8.615850e-47 |
| Msa0176060 | Msa0230800 | 0.832026 | 1.195319e-55 | -8.615850e-47 |
| Msa0176060 | Msa0230840 | 0.808965 | 2.390128e-50 | -8.615850e-47 |
| Msa0176060 | Msa0230870 | 0.838823 | 2.287321e-57 | -8.615850e-47 |
| Msa0176060 | Msa0233020 | 0.805424 | 1.344125e-49 | -8.615850e-47 |
| Msa0176060 | Msa0246210 | 0.801835 | 7.465029e-49 | -8.615850e-47 |
| Msa0176060 | Msa0262750 | 0.813658 | 2.289383e-51 | -8.615850e-47 |
| Msa0176060 | Msa0270340 | 0.802945 | 4.409295e-49 | -8.615850e-47 |
| Msa0176060 | Msa0272260 | 0.805245 | 1.465210e-49 | -8.615850e-47 |
| Msa0176060 | Msa0284800 | 0.846676 | 1.869617e-59 | -8.615850e-47 |
| Msa0176060 | Msa0307670 | 0.821833 | 3.271229e-53 | -8.615850e-47 |
| Msa0176060 | Msa0330520 | 0.851422 | 8.969244e-61 | -8.615850e-47 |
| Msa0176060 | Msa0334660 | 0.827435 | 1.566858e-54 | -8.615850e-47 |
| Msa0176060 | Msa0367520 | 0.840866 | 6.718369e-58 | -8.615850e-47 |
| Msa0176060 | Msa0367690 | 0.822953 | 1.797444e-53 | -8.615850e-47 |
| Msa0176060 | Msa0373590 | 0.804443 | 2.154535e-49 | -8.615850e-47 |
| Msa0176060 | Msa0380670 | 0.840154 | 1.031458e-57 | -8.615850e-47 |
| Msa0176060 | Msa0381730 | 0.838222 | 3.269452e-57 | -8.615850e-47 |
| Msa0176060 | Msa0382390 | 0.800968 | 1.123803e-48 | -8.615850e-47 |
| Msa0176060 | Msa0383000 | 0.804526 | 2.071020e-49 | -8.615850e-47 |
| Msa0176060 | Msa0384870 | 0.813769 | 2.163995e-51 | -8.615850e-47 |
| Msa0176060 | Msa0401060 | 0.811916 | 5.509448e-51 | -8.615850e-47 |
| Msa0176060 | Msa0415450 | 0.825330 | 4.971915e-54 | -8.615850e-47 |
| Msa0176060 | Msa0415600 | 0.803805 | 2.926085e-49 | -8.615850e-47 |
| Msa0176060 | Msa0421130 | 0.807596 | 4.677910e-50 | -8.615850e-47 |
| Msa0176060 | Msa0422050 | 0.820229 | 7.657724e-53 | -8.615850e-47 |
| Msa0176060 | Msa0426530 | 0.833375 | 5.529834e-56 | -8.615850e-47 |
| Msa0176060 | Msa0430300 | 0.828929 | 6.838513e-55 | -8.615850e-47 |
| Msa0176060 | Msa0430480 | 0.802808 | 4.705071e-49 | -8.615850e-47 |
| Msa0176060 | Msa0431200 | 0.854011 | 1.634437e-61 | -8.615850e-47 |
| Msa0176060 | Msa0432010 | 0.835332 | 1.785169e-56 | -8.615850e-47 |
| Msa0176060 | Msa0457570 | 0.817557 | 3.100591e-52 | -8.615850e-47 |
| Msa0176060 | Msa0460070 | 0.807066 | 6.059010e-50 | -8.615850e-47 |
| Msa0176060 | Msa0466520 | 0.811377 | 7.219303e-51 | -8.615850e-47 |
| Msa0176060 | Msa0466880 | 0.834912 | 2.278005e-56 | -8.615850e-47 |
| Msa0176060 | Msa0468700 | 0.827009 | 1.982532e-54 | -8.615850e-47 |
| Msa0176060 | Msa0476280 | 0.805269 | 1.447977e-49 | -8.615850e-47 |
| Msa0176060 | Msa0479320 | 0.802959 | 4.380252e-49 | -8.615850e-47 |
| Msa0176060 | Msa0481890 | 0.819202 | 1.314501e-52 | -8.615850e-47 |
| Msa0176060 | Msa0500920 | 0.827845 | 1.249243e-54 | -8.615850e-47 |
| Msa0176060 | Msa0504720 | 0.817546 | 3.118434e-52 | -8.615850e-47 |
| Msa0176060 | Msa0513080 | 0.802359 | 5.823033e-49 | -8.615850e-47 |
| Msa0176060 | Msa0514580 | 0.821661 | 3.585411e-53 | -8.615850e-47 |
| Msa0176060 | Msa0517250 | 0.846971 | 1.552810e-59 | -8.615850e-47 |
| Msa0176060 | Msa0520260 | 0.853218 | 2.763478e-61 | -8.615850e-47 |
| Msa0176060 | Msa0520870 | 0.839169 | 1.861319e-57 | -8.615850e-47 |
| Msa0176060 | Msa0520990 | 0.802059 | 6.714638e-49 | -8.615850e-47 |
| Msa0176060 | Msa0521830 | 0.815759 | 7.841638e-52 | -8.615850e-47 |
| Msa0176060 | Msa0529030 | 0.811778 | 5.903784e-51 | -8.615850e-47 |
| Msa0176060 | Msa0531960 | 0.843289 | 1.535591e-58 | -8.615850e-47 |
| Msa0176060 | Msa0532050 | 0.803546 | 3.311018e-49 | -8.615850e-47 |
| Msa0176060 | Msa0541300 | 0.808501 | 3.002097e-50 | -8.615850e-47 |
| Msa0176060 | Msa0541310 | 0.801612 | 8.295419e-49 | -8.615850e-47 |
| Msa0176060 | Msa0541740 | 0.801934 | 7.124512e-49 | -8.615850e-47 |
| Msa0176060 | Msa0549370 | 0.800399 | 1.467830e-48 | -8.615850e-47 |
| Msa0176060 | Msa0550590 | 0.814945 | 1.189757e-51 | -8.615850e-47 |
| Msa0176060 | Msa0553750 | 0.807008 | 6.234682e-50 | -8.615850e-47 |
| Msa0176060 | Msa0563940 | 0.825183 | 5.384840e-54 | -8.615850e-47 |
| Msa0176060 | Msa0567170 | 0.813864 | 2.062099e-51 | -8.615850e-47 |
| Msa0176060 | Msa0570010 | 0.849276 | 3.588676e-60 | -8.615850e-47 |
| Msa0176060 | Msa0576410 | 0.804732 | 1.875338e-49 | -8.615850e-47 |
| Msa0176060 | Msa0580810 | 0.824936 | 6.158873e-54 | -8.615850e-47 |
| Msa0176060 | Msa0587620 | 0.810932 | 9.015351e-51 | -8.615850e-47 |
| Msa0176060 | Msa0590200 | 0.814372 | 1.593332e-51 | -8.615850e-47 |
| Msa0176060 | Msa0606100 | 0.800752 | 1.243498e-48 | -8.615850e-47 |
| Msa0176060 | Msa0607800 | 0.840535 | 8.200841e-58 | -8.615850e-47 |
| Msa0176060 | Msa0612520 | 0.816241 | 6.121197e-52 | -8.615850e-47 |
| Msa0176060 | Msa0616210 | 0.817026 | 4.082018e-52 | -8.615850e-47 |
| Msa0176060 | Msa0619710 | 0.883526 | 4.163870e-71 | -8.615850e-47 |
| Msa0176060 | Msa0620500 | 0.811484 | 6.842745e-51 | -8.615850e-47 |
| Msa0176060 | Msa0620900 | 0.803199 | 3.907403e-49 | -8.615850e-47 |
| Msa0176060 | Msa0621710 | 0.824289 | 8.748873e-54 | -8.615850e-47 |
| Msa0176060 | Msa0625340 | 0.805308 | 1.421132e-49 | -8.615850e-47 |
| Msa0176060 | Msa0625620 | 0.827919 | 1.199331e-54 | -8.615850e-47 |
| Msa0176060 | Msa0630660 | 0.809346 | 1.980429e-50 | -8.615850e-47 |
| Msa0176060 | Msa0648040 | 0.830004 | 3.748391e-55 | -8.615850e-47 |
| Msa0176060 | Msa0657210 | 0.809422 | 1.907089e-50 | -8.615850e-47 |
| Msa0176060 | Msa0657700 | 0.821699 | 3.513977e-53 | -8.615850e-47 |
| Msa0176060 | Msa0666700 | 0.826632 | 2.439095e-54 | -8.615850e-47 |
| Msa0176060 | Msa0668900 | 0.819465 | 1.144864e-52 | -8.615850e-47 |
| Msa0176060 | Msa0675330 | 0.800115 | 1.676816e-48 | -8.615850e-47 |
| Msa0176060 | Msa0682770 | 0.808445 | 3.085987e-50 | -8.615850e-47 |
| Msa0176060 | Msa0687090 | 0.865537 | 5.497579e-65 | -8.615850e-47 |
| Msa0176060 | Msa0690740 | 0.832982 | 6.928537e-56 | -8.615850e-47 |
| Msa0176060 | Msa0698730 | 0.815036 | 1.135353e-51 | -8.615850e-47 |
| Msa0176060 | Msa0699540 | 0.819307 | 1.244153e-52 | -8.615850e-47 |
| Msa0176060 | Msa0700460 | 0.832108 | 1.141055e-55 | -8.615850e-47 |
| Msa0176060 | Msa0701250 | 0.804526 | 2.071042e-49 | -8.615850e-47 |
| Msa0176060 | Msa0702810 | 0.803787 | 2.950526e-49 | -8.615850e-47 |
| Msa0176060 | Msa0703950 | 0.814363 | 1.600444e-51 | -8.615850e-47 |
| Msa0176060 | Msa0706150 | 0.879803 | 9.242436e-70 | -8.615850e-47 |
| Msa0176060 | Msa0709440 | 0.822641 | 2.124401e-53 | -8.615850e-47 |
| Msa0176060 | Msa0711010 | 0.801474 | 8.852172e-49 | -8.615850e-47 |
| Msa0176060 | Msa0714520 | 0.808307 | 3.302310e-50 | -8.615850e-47 |
| Msa0176060 | Msa0716480 | 0.831937 | 1.257744e-55 | -8.615850e-47 |
| Msa0176060 | Msa0720410 | 0.812593 | 3.921603e-51 | -8.615850e-47 |
| Msa0176060 | Msa0722890 | 0.806291 | 8.833058e-50 | -8.615850e-47 |
| Msa0176060 | Msa0723090 | 0.805429 | 1.340896e-49 | -8.615850e-47 |
| Msa0176060 | Msa0725750 | 0.805657 | 1.200910e-49 | -8.615850e-47 |
| Msa0176060 | Msa0735780 | 0.816273 | 6.021082e-52 | -8.615850e-47 |
| Msa0176060 | Msa0736890 | 0.801623 | 8.251528e-49 | -8.615850e-47 |
| Msa0176060 | Msa0738700 | 0.800090 | 1.696745e-48 | -8.615850e-47 |
| Msa0176060 | Msa0740710 | 0.813164 | 2.940576e-51 | -8.615850e-47 |
| Msa0176060 | Msa0747000 | 0.945859 | 1.384311e-104 | -8.615850e-47 |
| Msa0176060 | Msa0747740 | 0.807127 | 5.882391e-50 | -8.615850e-47 |
| Msa0176060 | Msa0752780 | 0.803536 | 3.327123e-49 | -8.615850e-47 |
| Msa0176060 | Msa0756490 | 0.807464 | 4.990437e-50 | -8.615850e-47 |
| Msa0176060 | Msa0758650 | 0.800826 | 1.201365e-48 | -8.615850e-47 |
| Msa0176060 | Msa0760970 | 0.808263 | 3.375436e-50 | -8.615850e-47 |
| Msa0176060 | Msa0780910 | 0.824947 | 6.123220e-54 | -8.615850e-47 |
| Msa0176060 | Msa0792370 | 0.826718 | 2.325913e-54 | -8.615850e-47 |
| Msa0176060 | Msa0811690 | 0.827202 | 1.781724e-54 | -8.615850e-47 |
| Msa0176060 | Msa0821160 | 0.826249 | 3.009713e-54 | -8.615850e-47 |
| Msa0176060 | Msa0828970 | 0.804661 | 1.941143e-49 | -8.615850e-47 |
| Msa0176060 | Msa0837460 | 0.833744 | 4.473574e-56 | -8.615850e-47 |
| Msa0176060 | Msa0841590 | 0.806917 | 6.516312e-50 | -8.615850e-47 |
| Msa0176060 | Msa0851850 | 0.800631 | 1.316533e-48 | -8.615850e-47 |
| Msa0176060 | Msa0859290 | 0.804481 | 2.116224e-49 | -8.615850e-47 |
| Msa0176060 | Msa0866530 | 0.800629 | 1.317555e-48 | -8.615850e-47 |
| Msa0176060 | Msa0879920 | 0.801437 | 9.009209e-49 | -8.615850e-47 |
| Msa0176060 | Msa0894790 | 0.802685 | 4.989716e-49 | -8.615850e-47 |
| Msa0176060 | Msa0909760 | 0.839990 | 1.138375e-57 | -8.615850e-47 |
| Msa0176060 | Msa0921590 | 0.818312 | 2.093746e-52 | -8.615850e-47 |
| Msa0176060 | Msa0956350 | 0.826004 | 3.441914e-54 | -8.615850e-47 |
| Msa0176060 | Msa0989500 | 0.818870 | 1.564446e-52 | -8.615850e-47 |
| Msa0176060 | Msa0994720 | 0.807280 | 5.459373e-50 | -8.615850e-47 |
| Msa0176060 | Msa1002640 | 0.835681 | 1.456104e-56 | -8.615850e-47 |
| Msa0176060 | Msa1021590 | 0.834879 | 2.322307e-56 | -8.615850e-47 |
| Msa0176060 | Msa1025560 | 0.822438 | 2.368332e-53 | -8.615850e-47 |
| Msa0176060 | Msa1029530 | 0.809622 | 1.727484e-50 | -8.615850e-47 |
| Msa0176060 | Msa1034600 | 0.835077 | 2.069309e-56 | -8.615850e-47 |
| Msa0176060 | Msa1035220 | 0.808770 | 2.630901e-50 | -8.615850e-47 |
| Msa0176060 | Msa1035570 | 0.815993 | 6.952848e-52 | -8.615850e-47 |
| Msa0176060 | Msa1035610 | 0.823814 | 1.130906e-53 | -8.615850e-47 |
| Msa0176060 | Msa1042160 | 0.839153 | 1.878592e-57 | -8.615850e-47 |
| Msa0176060 | Msa1042190 | 0.842859 | 1.998489e-58 | -8.615850e-47 |
| Msa0176060 | Msa1044250 | 0.802276 | 6.059133e-49 | -8.615850e-47 |
| Msa0176060 | Msa1044680 | 0.818092 | 2.347211e-52 | -8.615850e-47 |
| Msa0176060 | Msa1059020 | 0.832453 | 9.370724e-56 | -8.615850e-47 |
| Msa0176060 | Msa1064370 | 0.817147 | 3.834395e-52 | -8.615850e-47 |
| Msa0176060 | Msa1068400 | 0.800309 | 1.531106e-48 | -8.615850e-47 |
| Msa0176060 | Msa1074370 | 0.802911 | 4.480583e-49 | -8.615850e-47 |
| Msa0176060 | Msa1074600 | 0.817413 | 3.341413e-52 | -8.615850e-47 |
| Msa0176060 | Msa1076820 | 0.801458 | 8.918333e-49 | -8.615850e-47 |
| Msa0176060 | Msa1078820 | 0.836944 | 6.952695e-57 | -8.615850e-47 |
| Msa0176060 | Msa1078880 | 0.819679 | 1.023017e-52 | -8.615850e-47 |
| Msa0176060 | Msa1078970 | 0.820448 | 6.823812e-53 | -8.615850e-47 |
| Msa0176060 | Msa1080000 | 0.828112 | 1.077327e-54 | -8.615850e-47 |
| Msa0176060 | Msa1081390 | 0.809643 | 1.709844e-50 | -8.615850e-47 |
| Msa0176060 | Msa1081690 | 0.824623 | 7.299822e-54 | -8.615850e-47 |
| Msa0176060 | Msa1082200 | 0.805616 | 1.224999e-49 | -8.615850e-47 |
| Msa0176060 | Msa1082380 | 0.802290 | 6.017228e-49 | -8.615850e-47 |
| Msa0176060 | Msa1084530 | 0.813596 | 2.363253e-51 | -8.615850e-47 |
| Msa0176060 | Msa1090140 | 0.801820 | 7.518963e-49 | -8.615850e-47 |
| Msa0176060 | Msa1104110 | 0.819136 | 1.360854e-52 | -8.615850e-47 |
| Msa0176060 | Msa1105640 | 0.838730 | 2.417549e-57 | -8.615850e-47 |
| Msa0176060 | Msa1109390 | 0.813136 | 2.981242e-51 | -8.615850e-47 |
| Msa0176060 | Msa1116220 | 0.823623 | 1.253894e-53 | -8.615850e-47 |
| Msa0176060 | Msa1116660 | 0.805394 | 1.363458e-49 | -8.615850e-47 |
| Msa0176060 | Msa1123970 | 0.839599 | 1.438798e-57 | -8.615850e-47 |
| Msa0176060 | Msa1125820 | 0.824689 | 7.045201e-54 | -8.615850e-47 |
| Msa0176060 | Msa1125990 | 0.825673 | 4.124116e-54 | -8.615850e-47 |
| Msa0176060 | Msa1132530 | 0.821694 | 3.523664e-53 | -8.615850e-47 |
| Msa0176060 | Msa1147700 | 0.817318 | 3.508506e-52 | -8.615850e-47 |
| Msa0176060 | Msa1148960 | 0.818071 | 2.373435e-52 | -8.615850e-47 |
| Msa0176060 | Msa1160790 | 0.807632 | 4.596298e-50 | -8.615850e-47 |
| Msa0176060 | Msa1166190 | 0.851503 | 8.504363e-61 | -8.615850e-47 |
| Msa0176060 | Msa1166290 | 0.846396 | 2.229546e-59 | -8.615850e-47 |
| Msa0176060 | Msa1167470 | 0.842019 | 3.337740e-58 | -8.615850e-47 |
| Msa0176060 | Msa1169190 | 0.818731 | 1.682064e-52 | -8.615850e-47 |
| Msa0176060 | Msa1169650 | 0.839232 | 1.791676e-57 | -8.615850e-47 |
| Msa0176060 | Msa1171290 | 0.815800 | 7.677754e-52 | -8.615850e-47 |
| Msa0176060 | Msa1192560 | 0.821617 | 3.670264e-53 | -8.615850e-47 |
| Msa0176060 | Msa1192590 | 0.817214 | 3.703765e-52 | -8.615850e-47 |
| Msa0176060 | Msa1194240 | 0.822539 | 2.244175e-53 | -8.615850e-47 |
| Msa0176060 | Msa1205110 | 0.815057 | 1.123736e-51 | -8.615850e-47 |
| Msa0176060 | Msa1214350 | 0.803359 | 3.620266e-49 | -8.615850e-47 |
| Msa0176060 | Msa1215980 | 0.811978 | 5.341527e-51 | -8.615850e-47 |
| Msa0176060 | Msa1216090 | 0.800109 | 1.681483e-48 | -8.615850e-47 |
| Msa0176060 | Msa1216110 | 0.811203 | 7.873864e-51 | -8.615850e-47 |
| Msa0176060 | Msa1216340 | 0.823843 | 1.113692e-53 | -8.615850e-47 |
| Msa0176060 | Msa1217050 | 0.821076 | 4.892250e-53 | -8.615850e-47 |
| Msa0176060 | Msa1217230 | 0.833199 | 6.117926e-56 | -8.615850e-47 |
| Msa0176060 | Msa1218820 | 0.818986 | 1.471966e-52 | -8.615850e-47 |
| Msa0176060 | Msa1221120 | 0.801615 | 8.280595e-49 | -8.615850e-47 |
| Msa0176060 | Msa1226520 | 0.801253 | 9.825654e-49 | -8.615850e-47 |
| Msa0176060 | Msa1228580 | 0.828157 | 1.050851e-54 | -8.615850e-47 |
| Msa0176060 | Msa1228630 | 0.852666 | 3.974482e-61 | -8.615850e-47 |
| Msa0176060 | Msa1240770 | 0.835009 | 2.152848e-56 | -8.615850e-47 |
| Msa0176060 | Msa1240940 | 0.804973 | 1.670071e-49 | -8.615850e-47 |
| Msa0176060 | Msa1242130 | 0.814220 | 1.721340e-51 | -8.615850e-47 |
| Msa0176060 | Msa1244240 | 0.800342 | 1.507276e-48 | -8.615850e-47 |
| Msa0176060 | Msa1250610 | 0.823710 | 1.196452e-53 | -8.615850e-47 |
| Msa0176060 | Msa1254540 | 0.836084 | 1.150893e-56 | -8.615850e-47 |
| Msa0176060 | Msa1262590 | 0.845226 | 4.634171e-59 | -8.615850e-47 |
| Msa0176060 | Msa1263740 | 0.817402 | 3.360444e-52 | -8.615850e-47 |
| Msa0176060 | Msa1263780 | 0.832620 | 8.520546e-56 | -8.615850e-47 |
| Msa0176060 | Msa1267930 | 0.805310 | 1.419811e-49 | -8.615850e-47 |
| Msa0176060 | Msa1282260 | 0.815855 | 7.463958e-52 | -8.615850e-47 |
| Msa0176060 | Msa1283960 | 0.822796 | 1.955268e-53 | -8.615850e-47 |
| Msa0176060 | Msa1300460 | 0.812963 | 3.253599e-51 | -8.615850e-47 |
| Msa0176060 | Msa1308850 | 0.837786 | 4.233234e-57 | -8.615850e-47 |
| Msa0176060 | Msa1315160 | 0.824158 | 9.390990e-54 | -8.615850e-47 |
| Msa0176060 | Msa1321340 | 0.817572 | 3.076864e-52 | -8.615850e-47 |
| Msa0176060 | Msa1321530 | 0.815984 | 6.984598e-52 | -8.615850e-47 |
| Msa0176060 | Msa1326640 | 0.810742 | 9.908650e-51 | -8.615850e-47 |
| Msa0176060 | Msa1326680 | 0.824214 | 9.111037e-54 | -8.615850e-47 |
| Msa0176060 | Msa1327800 | 0.814824 | 1.265247e-51 | -8.615850e-47 |
| Msa0176060 | Msa1332950 | 0.837012 | 6.681747e-57 | -8.615850e-47 |
| Msa0176060 | Msa1342810 | 0.830628 | 2.638374e-55 | -8.615850e-47 |
| Msa0176060 | Msa1349690 | 0.812727 | 3.665109e-51 | -8.615850e-47 |
| Msa0176060 | Msa1358290 | 0.823368 | 1.438347e-53 | -8.615850e-47 |
| Msa0176060 | Msa1364680 | 0.804392 | 2.208411e-49 | -8.615850e-47 |
| Msa0176060 | Msa1368750 | 0.833510 | 5.118215e-56 | -8.615850e-47 |
| Msa0176060 | Msa1374790 | 0.841067 | 5.948548e-58 | -8.615850e-47 |
| Msa0176060 | Msa1375350 | 0.810744 | 9.896177e-51 | -8.615850e-47 |
| Msa0176060 | Msa1383310 | 0.844925 | 5.588512e-59 | -8.615850e-47 |
| Msa0176060 | Msa1387500 | 0.800027 | 1.747297e-48 | -8.615850e-47 |
| Msa0176060 | Msa1392740 | 0.806017 | 1.009056e-49 | -8.615850e-47 |
| Msa0176060 | Msa1393780 | 0.825337 | 4.951438e-54 | -8.615850e-47 |
| Msa0176060 | Msa1405460 | 0.809835 | 1.554499e-50 | -8.615850e-47 |
| Msa0176060 | Msa1406720 | 0.817232 | 3.668967e-52 | -8.615850e-47 |
| Msa0176060 | Msa1407840 | 0.803851 | 2.861191e-49 | -8.615850e-47 |
| Msa0176060 | Msa1409410 | 0.863224 | 2.899459e-64 | -8.615850e-47 |
| Msa0176060 | Msa1410160 | 0.855787 | 4.990330e-62 | -8.615850e-47 |
| Msa0176060 | Msa1411790 | 0.805180 | 1.511610e-49 | -8.615850e-47 |
| Msa0176060 | Msa1413940 | 0.811376 | 7.220024e-51 | -8.615850e-47 |
| Msa0176060 | Msa1414170 | 0.827944 | 1.182579e-54 | -8.615850e-47 |
| Msa0176060 | Msa1417370 | 0.823429 | 1.391481e-53 | -8.615850e-47 |
| Msa0176060 | Msa1426110 | 0.818190 | 2.230448e-52 | -8.615850e-47 |
| Msa0176060 | Msa1431480 | 0.821431 | 4.053623e-53 | -8.615850e-47 |
| Msa0176060 | Msa1437810 | 0.804582 | 2.015435e-49 | -8.615850e-47 |
| Msa0176060 | Msa1440630 | 0.843293 | 1.531477e-58 | -8.615850e-47 |
| Msa0176060 | Msa1450190 | 0.806119 | 9.601941e-50 | -8.615850e-47 |
| Msa0176060 | Msa1451820 | 0.839411 | 1.610023e-57 | -8.615850e-47 |
| Msa0176060 | Msa1452140 | 0.830954 | 2.195249e-55 | -8.615850e-47 |
| Msa0176060 | Msa1462490 | 0.809398 | 1.929515e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0176060 | MtrunA17_Chr1g0197601 | 88.321 | 274 | 18 | 2 | 1 | 260 | 242 | 515 | 1.20e-165 | 468 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 127 sgRNAs with CRISPR-Local
Find 231 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGTAGCGAGGGTTTGGATTT+TGG | 0.126338 | 1_4:+62266434 | Msa0176060:five_prime_UTR |
| CGCAGATAATTCTAATTTAC+TGG | 0.215505 | 1_4:+62268884 | Msa0176060:CDS |
| CCTTGTTAGTCAAATCTAAA+TGG | 0.252894 | 1_4:-62268243 | None:intergenic |
| CAGTTGTGTTGATTCTTCTC+TGG | 0.258782 | 1_4:-62269458 | None:intergenic |
| GACAATGGGCATGTCGTAAA+TGG | 0.303801 | 1_4:+62268328 | Msa0176060:five_prime_UTR |
| CTTCTTTATATCCTTCTCTA+AGG | 0.313422 | 1_4:-62268814 | None:intergenic |
| TCTGGAACTTTCTTGAGTTC+AGG | 0.316178 | 1_4:-62268130 | None:intergenic |
| GTTTCTGATGGGCATTATAC+TGG | 0.323187 | 1_4:+62268397 | Msa0176060:five_prime_UTR |
| TCCTGCTAAATTCAACTTGC+AGG | 0.334858 | 1_4:+62268013 | Msa0176060:five_prime_UTR |
| AAAGCCATTGTCAATGCCTT+TGG | 0.335893 | 1_4:+62269683 | Msa0176060:CDS |
| CGAGTAGCGTAGCGAGGGTT+TGG | 0.350834 | 1_4:+62266427 | Msa0176060:five_prime_UTR |
| ATGATGCATTCTGTTGTAAA+AGG | 0.367939 | 1_4:+62266862 | Msa0176060:five_prime_UTR |
| ATGCACTGACTTGTTCTTTG+TGG | 0.392523 | 1_4:-62268995 | None:intergenic |
| AGTTGTGTTGATTCTTCTCT+GGG | 0.392668 | 1_4:-62269457 | None:intergenic |
| TTATGTGTAAGAGTAATTGA+TGG | 0.394119 | 1_4:-62267918 | None:intergenic |
| GCTGATAAATATAGGCTTGA+TGG | 0.400710 | 1_4:+62269417 | Msa0176060:CDS |
| AGCAGTGGGTCATTTGTATC+TGG | 0.405639 | 1_4:-62268148 | None:intergenic |
| TGCACTGACTTGTTCTTTGT+GGG | 0.406260 | 1_4:-62268994 | None:intergenic |
| CCTTGTTTGTCATGTCTACC+TGG | 0.406365 | 1_4:-62268465 | None:intergenic |
| AAGCCATTGTCAATGCCTTT+GGG | 0.408921 | 1_4:+62269684 | Msa0176060:CDS |
| CAAGGAATCTGTTGAAGCTT+CGG | 0.412916 | 1_4:+62268483 | Msa0176060:CDS |
| GGTTTACTTACCTGCATCTC+AGG | 0.415129 | 1_4:-62268622 | None:intergenic |
| CAATAGAGCGAAAAGAGGAT+TGG | 0.415556 | 1_4:-62269660 | None:intergenic |
| CTCAGGTATAGTAGCTTCAA+TGG | 0.415944 | 1_4:-62268605 | None:intergenic |
| CACTTGCAATTGAACCCAAC+GGG | 0.428684 | 1_4:-62268067 | None:intergenic |
| AGGAATAGCAATGGAATAGA+AGG | 0.440749 | 1_4:+62268762 | Msa0176060:CDS |
| TTATACTGAAGCTGAGCATC+AGG | 0.444025 | 1_4:+62268189 | Msa0176060:five_prime_UTR |
| AGTTTCCACTGTTTGACTCT+TGG | 0.444341 | 1_4:-62267893 | None:intergenic |
| TTATACTGAAACTGAGCATC+AGG | 0.445424 | 1_4:+62268300 | Msa0176060:five_prime_UTR |
| GAAGCTTCTGTTGTTTCTGA+TGG | 0.445970 | 1_4:+62268385 | Msa0176060:five_prime_UTR |
| AGCAATGGAATAGAAGGTTC+AGG | 0.448760 | 1_4:+62268768 | Msa0176060:CDS |
| CACTTTCCGTATCATGCCTA+GGG | 0.451455 | 1_4:-62268959 | None:intergenic |
| AGCTTGAGATTGTTGACAAA+GGG | 0.454249 | 1_4:+62268539 | Msa0176060:CDS |
| AATAGAGCGAAAAGAGGATT+GGG | 0.454588 | 1_4:-62269659 | None:intergenic |
| TCCTGCAAGTTGAATTTAGC+AGG | 0.458783 | 1_4:-62268014 | None:intergenic |
| TGAAACATATAACCAAAGTC+AGG | 0.459332 | 1_4:+62269040 | Msa0176060:CDS |
| GATGCACTGAGAAAATGTTC+AGG | 0.461766 | 1_4:-62268091 | None:intergenic |
| GCACTTTCCGTATCATGCCT+AGG | 0.462980 | 1_4:-62268960 | None:intergenic |
| TGCATGAAGCTGATAAATAT+AGG | 0.464650 | 1_4:+62269409 | Msa0176060:CDS |
| GTGTGAAATCAGTGTGAAGA+AGG | 0.467565 | 1_4:-62266464 | None:intergenic |
| AATCCGAGTCTTTCTCCCTT+CGG | 0.470466 | 1_4:-62266926 | None:intergenic |
| GAATCAACACAACTGTAGAT+AGG | 0.471897 | 1_4:+62269466 | Msa0176060:CDS |
| GTGGCTCTTTCTACACTGTA+AGG | 0.472014 | 1_4:+62267949 | Msa0176060:five_prime_UTR |
| AATTCAAGAAAATAGAGTGC+TGG | 0.476605 | 1_4:+62267989 | Msa0176060:five_prime_UTR |
| CTCAGTGCATCATCAAATGA+AGG | 0.476801 | 1_4:+62268103 | Msa0176060:five_prime_UTR |
| ATCAGAAACAACAGAAGCTT+CGG | 0.480753 | 1_4:-62268383 | None:intergenic |
| TAGAAGGTTCAGGAGAATTG+AGG | 0.482054 | 1_4:+62268778 | Msa0176060:CDS |
| AGCGACAACAGTGGCTTCAA+TGG | 0.482213 | 1_4:-62268269 | None:intergenic |
| AGCATCAGGTGGTTGACAAT+GGG | 0.489034 | 1_4:+62268314 | Msa0176060:five_prime_UTR |
| GAGAAATTTGAGAGTCCCCT+TGG | 0.490832 | 1_4:+62268909 | Msa0176060:CDS |
| AGAAGGTTCAGGAGAATTGA+GGG | 0.492321 | 1_4:+62268779 | Msa0176060:CDS |
| GGTTGTGTGGTATGACTATG+AGG | 0.492424 | 1_4:+62269887 | Msa0176060:three_prime_UTR |
| AAGCTTCTGTTGTTTCTGAT+GGG | 0.493641 | 1_4:+62268386 | Msa0176060:five_prime_UTR |
| AGCTCAAGGTTGTTGACAAA+GGG | 0.499242 | 1_4:+62268425 | Msa0176060:five_prime_UTR |
| AGAGAAGGATATAAAGAAGT+TGG | 0.501128 | 1_4:+62268818 | Msa0176060:CDS |
| TATAGGCTTGATGGTCAACT+TGG | 0.501804 | 1_4:+62269426 | Msa0176060:CDS |
| ATGTGAAGTTATTCTTCAGC+AGG | 0.504378 | 1_4:-62269796 | None:intergenic |
| ACACTGTAAGGGAGATTGTA+CGG | 0.505294 | 1_4:+62267961 | Msa0176060:five_prime_UTR |
| TTTGTCAACAACCTTGAGCT+CGG | 0.510556 | 1_4:-62268422 | None:intergenic |
| GACAAAGGGCATGGCATCGA+TGG | 0.513666 | 1_4:+62268553 | Msa0176060:CDS |
| TATATTTATCAGCTTCATGC+AGG | 0.514009 | 1_4:-62269407 | None:intergenic |
| TTCCGTATCATGCCTAGGGT+TGG | 0.517395 | 1_4:-62268955 | None:intergenic |
| ACATTTCCATTGAGATCTGT+TGG | 0.519105 | 1_4:+62268738 | Msa0176060:CDS |
| ATTCAAGAAAATAGAGTGCT+GGG | 0.524858 | 1_4:+62267990 | Msa0176060:five_prime_UTR |
| AGCTACTATACCTGAGATGC+AGG | 0.526391 | 1_4:+62268612 | Msa0176060:CDS |
| TCGGATTCGACGCTCTAAAG+AGG | 0.528962 | 1_4:+62266942 | Msa0176060:five_prime_UTR |
| TTCCTACCAACAGATCTCAA+TGG | 0.530928 | 1_4:-62268744 | None:intergenic |
| CTCCAACCCTAGGCATGATA+CGG | 0.531026 | 1_4:+62268953 | Msa0176060:CDS |
| CTGTTGTAAAAGGTGGTTGG+AGG | 0.534279 | 1_4:+62266872 | Msa0176060:five_prime_UTR |
| GTTTCACTGCAGAGAGTCAT+GGG | 0.534713 | 1_4:+62269604 | Msa0176060:intron |
| GGCAGCTACCACAGTACCAT+TGG | 0.536413 | 1_4:+62268677 | Msa0176060:CDS |
| CCATTTAGATTTGACTAACA+AGG | 0.536765 | 1_4:+62268243 | Msa0176060:five_prime_UTR |
| GGTTTCACTGCAGAGAGTCA+TGG | 0.537898 | 1_4:+62269603 | Msa0176060:intron |
| AGAGCATTTACTTTAGCCAA+TGG | 0.543934 | 1_4:-62268693 | None:intergenic |
| GAACTTTCTTGAGTTCAGGA+TGG | 0.544040 | 1_4:-62268126 | None:intergenic |
| TCAGGAGAATTGAGGGACTC+TGG | 0.544330 | 1_4:+62268786 | Msa0176060:CDS |
| CTCTGGTAATTCCTTAGAGA+AGG | 0.546329 | 1_4:+62268803 | Msa0176060:CDS |
| GCTATTATCTACGCTGATTG+TGG | 0.546802 | 1_4:+62269758 | Msa0176060:three_prime_UTR |
| TCAGGTATAGTAGCTTCAAT+GGG | 0.548881 | 1_4:-62268604 | None:intergenic |
| GAGCATCAGGTGGTTGACAA+TGG | 0.551435 | 1_4:+62268313 | Msa0176060:five_prime_UTR |
| AGCATCAGGTGGTTGACGAT+GGG | 0.552915 | 1_4:+62268203 | Msa0176060:five_prime_UTR |
| ACGCTCTAAAGAGGAAAGAA+AGG | 0.556254 | 1_4:+62266951 | Msa0176060:five_prime_UTR |
| TAAAGGAAATCTCCAACCCT+AGG | 0.557511 | 1_4:+62268943 | Msa0176060:CDS |
| TGCTTGGCAAGAGCAAATGT+TGG | 0.557759 | 1_4:-62266895 | None:intergenic |
| GCGCAGCATAGATACTAGCC+AGG | 0.560011 | 1_4:+62268447 | Msa0176060:five_prime_UTR |
| GAGATTGTTGACAAAGGGCA+TGG | 0.567220 | 1_4:+62268544 | Msa0176060:CDS |
| CACTGTAAGGGAGATTGTAC+GGG | 0.570068 | 1_4:+62267962 | Msa0176060:five_prime_UTR |
| GCTTTCAATAGAGCGAAAAG+AGG | 0.573031 | 1_4:-62269665 | None:intergenic |
| AGGCTTGATGGTCAACTTGG+TGG | 0.575093 | 1_4:+62269429 | Msa0176060:CDS |
| TTCCATTGAGATCTGTTGGT+AGG | 0.575819 | 1_4:+62268742 | Msa0176060:CDS |
| GAGCATCAGGTGGTTGACGA+TGG | 0.577300 | 1_4:+62268202 | Msa0176060:five_prime_UTR |
| TTTCCCAAAGGCATTGACAA+TGG | 0.578706 | 1_4:-62269687 | None:intergenic |
| GAGCTCAAGGTTGTTGACAA+AGG | 0.582128 | 1_4:+62268424 | Msa0176060:five_prime_UTR |
| ATGCACTGAGAAAATGTTCA+GGG | 0.584423 | 1_4:-62268090 | None:intergenic |
| TTATACTGGAACCGAGCTCA+AGG | 0.590294 | 1_4:+62268411 | Msa0176060:five_prime_UTR |
| GCCAAGCAAAATGATTCCGA+AGG | 0.591551 | 1_4:+62266910 | Msa0176060:five_prime_UTR |
| TGTGGTATGACTATGAGGGC+AGG | 0.594180 | 1_4:+62269892 | Msa0176060:three_prime_UTR |
| TGTTGTTTGTCACATCGACA+TGG | 0.596080 | 1_4:-62268354 | None:intergenic |
| CCAGGTAGACATGACAAACA+AGG | 0.596454 | 1_4:+62268465 | Msa0176060:exon |
| TGCTGAAGAATAACTTCACA+TGG | 0.603325 | 1_4:+62269798 | Msa0176060:three_prime_UTR |
| TAAAGAGGAAAGAAAGGCAA+TGG | 0.604920 | 1_4:+62266957 | Msa0176060:five_prime_UTR |
| CGCGGTAGATGTGATAAACA+AGG | 0.605122 | 1_4:+62268579 | Msa0176060:CDS |
| TGGCTCTTTCTACACTGTAA+GGG | 0.609781 | 1_4:+62267950 | Msa0176060:five_prime_UTR |
| TATTGTCGAGTAGCGTAGCG+AGG | 0.610584 | 1_4:+62266421 | Msa0176060:five_prime_UTR |
| TCTGTTGGTAGGAATAGCAA+TGG | 0.614572 | 1_4:+62268753 | Msa0176060:CDS |
| GCACTTGCAATTGAACCCAA+CGG | 0.616256 | 1_4:-62268068 | None:intergenic |
| ATTCCGAAGGGAGAAAGACT+CGG | 0.621876 | 1_4:+62266923 | Msa0176060:five_prime_UTR |
| TATCAGAAACAGAAAGCAGT+GGG | 0.627200 | 1_4:-62268162 | None:intergenic |
| ACTCTTACACATAAAGAAGT+CGG | 0.628566 | 1_4:+62267927 | Msa0176060:five_prime_UTR |
| GAGCTTGAGATTGTTGACAA+AGG | 0.629639 | 1_4:+62268538 | Msa0176060:CDS |
| GATGGGCATGTCATAGATGT+TGG | 0.629886 | 1_4:+62268220 | Msa0176060:five_prime_UTR |
| ATTGTCGAGTAGCGTAGCGA+GGG | 0.630230 | 1_4:+62266422 | Msa0176060:five_prime_UTR |
| TACTTTAGCCAATGGTACTG+TGG | 0.635115 | 1_4:-62268685 | None:intergenic |
| GTGGTATGACTATGAGGGCA+GGG | 0.637413 | 1_4:+62269893 | Msa0176060:three_prime_UTR |
| TACTGAAGCTGAGCATCAGG+TGG | 0.639952 | 1_4:+62268192 | Msa0176060:five_prime_UTR |
| CCAAGCAAAATGATTCCGAA+GGG | 0.647968 | 1_4:+62266911 | Msa0176060:five_prime_UTR |
| ATTCTGTTGTAAAAGGTGGT+TGG | 0.651800 | 1_4:+62266869 | Msa0176060:five_prime_UTR |
| ATGCATTCTGTTGTAAAAGG+TGG | 0.653181 | 1_4:+62266865 | Msa0176060:five_prime_UTR |
| TACTGAAACTGAGCATCAGG+TGG | 0.657285 | 1_4:+62268303 | Msa0176060:five_prime_UTR |
| GTTGTGTGGTATGACTATGA+GGG | 0.680122 | 1_4:+62269888 | Msa0176060:three_prime_UTR |
| CTTACACATAAAGAAGTCGG+TGG | 0.685561 | 1_4:+62267930 | Msa0176060:five_prime_UTR |
| AGGTACCAAGAGTCAAACAG+TGG | 0.692269 | 1_4:+62267888 | Msa0176060:intron |
| TTATCAGAAACAGAAAGCAG+TGG | 0.699398 | 1_4:-62268163 | None:intergenic |
| ACTCTCATCAGCGACAACAG+TGG | 0.699689 | 1_4:-62268278 | None:intergenic |
| ACGCTACTCGACAATAGTGA+CGG | 0.701418 | 1_4:-62266414 | None:intergenic |
| CAGTAAATTAGAATTATCTG+CGG | 0.719411 | 1_4:-62268883 | None:intergenic |
| GCATGGCATCGATGGCAGCG+CGG | 0.725070 | 1_4:+62268561 | Msa0176060:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATGAATTTTAAAAAGTAAAA+GGG | - | chr1_4:62267106-62267125 | None:intergenic | 10.0% |
| !! | TTCTATTATAAATACAAATA+AGG | - | chr1_4:62267680-62267699 | None:intergenic | 10.0% |
| !!! | ATAATCTAAAATTTTAGAAA+GGG | - | chr1_4:62269844-62269863 | None:intergenic | 10.0% |
| !!! | AATAATCTAAAATTTTAGAA+AGG | - | chr1_4:62269845-62269864 | None:intergenic | 10.0% |
| !! | AATTCAATTAAATAAGTATC+CGG | - | chr1_4:62266716-62266735 | None:intergenic | 15.0% |
| !!! | TGAATTTTAAAAAGTAAAAG+GGG | - | chr1_4:62267105-62267124 | None:intergenic | 15.0% |
| !!! | CATGAATTTTAAAAAGTAAA+AGG | - | chr1_4:62267107-62267126 | None:intergenic | 15.0% |
| !! | ACAAATTGTTAAAATCAATT+AGG | - | chr1_4:62267776-62267795 | None:intergenic | 15.0% |
| !!! | GATTTTAACAATTTGTTTAA+AGG | + | chr1_4:62267780-62267799 | Msa0176060:intron | 15.0% |
| !! | AAACTAAATTATGGATAAAA+AGG | - | chr1_4:62269070-62269089 | None:intergenic | 15.0% |
| !! | TGAAGTAAAGTTAATTAAAT+TGG | + | chr1_4:62269547-62269566 | Msa0176060:intron | 15.0% |
| !!! | TAATCTAAAATTTTAGAAAG+GGG | - | chr1_4:62269843-62269862 | None:intergenic | 15.0% |
| !! | GCGAAAATAAAAAAGAAAAT+GGG | - | chr1_4:62266563-62266582 | None:intergenic | 20.0% |
| !! | AGCGAAAATAAAAAAGAAAA+TGG | - | chr1_4:62266564-62266583 | None:intergenic | 20.0% |
| !! | AAATGAAAGAGAGAAATTAT+GGG | - | chr1_4:62266646-62266665 | None:intergenic | 20.0% |
| !! | AAAATGAAAGAGAGAAATTA+TGG | - | chr1_4:62266647-62266666 | None:intergenic | 20.0% |
| !! | ATTCAATTAAATAAGTATCC+GGG | - | chr1_4:62266715-62266734 | None:intergenic | 20.0% |
| !!! | AAGAAATTACTTTTGAATGA+AGG | - | chr1_4:62266989-62267008 | None:intergenic | 20.0% |
| !! | TACACAAATAATAACACAAT+GGG | - | chr1_4:62267613-62267632 | None:intergenic | 20.0% |
| !!! | GTTTTGTTCTAAAAATTGAT+CGG | - | chr1_4:62268048-62268067 | None:intergenic | 20.0% |
| !!! | AATTACTTTCTTTCTAGTTA+TGG | + | chr1_4:62269317-62269336 | Msa0176060:intron | 20.0% |
| !!! | ATTACTTTCTTTCTAGTTAT+GGG | + | chr1_4:62269318-62269337 | Msa0176060:intron | 20.0% |
| !! | CTTTACTTCATTAAACTAAA+TGG | - | chr1_4:62269537-62269556 | None:intergenic | 20.0% |
| !!! | AATCTAAAATTTTAGAAAGG+GGG | - | chr1_4:62269842-62269861 | None:intergenic | 20.0% |
| !! | TAGGTTAGTTGAATGAAAAT+GGG | - | chr1_4:62266614-62266633 | None:intergenic | 25.0% |
| !! | TTAGGTTAGTTGAATGAAAA+TGG | - | chr1_4:62266615-62266634 | None:intergenic | 25.0% |
| ! | TTATATTGCTAACAAACGAA+TGG | + | chr1_4:62267130-62267149 | Msa0176060:intron | 25.0% |
| ! | TTGTGATAGATAAAAGAAGA+CGG | + | chr1_4:62267172-62267191 | Msa0176060:intron | 25.0% |
| !!! | AAACAAGGAAAACTTTGTTT+TGG | + | chr1_4:62267211-62267230 | Msa0176060:intron | 25.0% |
| ! | AAAATTGTACAAGAAAACAG+TGG | + | chr1_4:62267272-62267291 | Msa0176060:intron | 25.0% |
| ! | AAATTGTACAAGAAAACAGT+GGG | + | chr1_4:62267273-62267292 | Msa0176060:intron | 25.0% |
| ! | CTACACAAATAATAACACAA+TGG | - | chr1_4:62267614-62267633 | None:intergenic | 25.0% |
| ! | TTATGTGTAAGAGTAATTGA+TGG | - | chr1_4:62267921-62267940 | None:intergenic | 25.0% |
| ! | CAGTAAATTAGAATTATCTG+CGG | - | chr1_4:62268886-62268905 | None:intergenic | 25.0% |
| !!! | TTTAACTTTTTGTTTCCAAG+GGG | - | chr1_4:62268927-62268946 | None:intergenic | 25.0% |
| !!! | CTTTAACTTTTTGTTTCCAA+GGG | - | chr1_4:62268928-62268947 | None:intergenic | 25.0% |
| ! | TTATCACCACTAAGAAAATT+TGG | + | chr1_4:62269096-62269115 | Msa0176060:intron | 25.0% |
| ! | TATCACCACTAAGAAAATTT+GGG | + | chr1_4:62269097-62269116 | Msa0176060:intron | 25.0% |
| ! | TAAACGATTCTGTATTGTAT+GGG | - | chr1_4:62269279-62269298 | None:intergenic | 25.0% |
| ! | ATAAACGATTCTGTATTGTA+TGG | - | chr1_4:62269280-62269299 | None:intergenic | 25.0% |
| !!! | TCAATTTCTTTTAACTAGAG+AGG | - | chr1_4:62269921-62269940 | None:intergenic | 25.0% |
| ATGATGCATTCTGTTGTAAA+AGG | + | chr1_4:62266862-62266881 | Msa0176060:five_prime_UTR | 30.0% | |
| ! | ACTCATGTTTTACTACTTTC+TGG | + | chr1_4:62267018-62267037 | Msa0176060:intron | 30.0% |
| TGTGATAGATAAAAGAAGAC+GGG | + | chr1_4:62267173-62267192 | Msa0176060:intron | 30.0% | |
| AAAACAGTGGGAAAAATACT+GGG | + | chr1_4:62267285-62267304 | Msa0176060:intron | 30.0% | |
| AAATACTGGGAAATGATAAC+AGG | + | chr1_4:62267298-62267317 | Msa0176060:intron | 30.0% | |
| TGAATTGAAAGAAGCAATAC+CGG | + | chr1_4:62267390-62267409 | Msa0176060:intron | 30.0% | |
| GTGAATACGTTTAGCAAATA+CGG | - | chr1_4:62267524-62267543 | None:intergenic | 30.0% | |
| AAATAATAACACAATGGGAG+GGG | - | chr1_4:62267608-62267627 | None:intergenic | 30.0% | |
| CAAATAATAACACAATGGGA+GGG | - | chr1_4:62267609-62267628 | None:intergenic | 30.0% | |
| ACAAATAATAACACAATGGG+AGG | - | chr1_4:62267610-62267629 | None:intergenic | 30.0% | |
| CTATATAGTTACTTGTCTTC+AGG | + | chr1_4:62267868-62267887 | Msa0176060:intron | 30.0% | |
| ACTCTTACACATAAAGAAGT+CGG | + | chr1_4:62267927-62267946 | Msa0176060:five_prime_UTR | 30.0% | |
| AATTCAAGAAAATAGAGTGC+TGG | + | chr1_4:62267989-62268008 | Msa0176060:five_prime_UTR | 30.0% | |
| ! | ATTCAAGAAAATAGAGTGCT+GGG | + | chr1_4:62267990-62268009 | Msa0176060:five_prime_UTR | 30.0% |
| !!! | ATTTTTAGAACAAAACCCGT+TGG | + | chr1_4:62268052-62268071 | Msa0176060:five_prime_UTR | 30.0% |
| !!! | TTTTTAGAACAAAACCCGTT+GGG | + | chr1_4:62268053-62268072 | Msa0176060:five_prime_UTR | 30.0% |
| CCTTGTTAGTCAAATCTAAA+TGG | - | chr1_4:62268246-62268265 | None:intergenic | 30.0% | |
| CCATTTAGATTTGACTAACA+AGG | + | chr1_4:62268243-62268262 | Msa0176060:five_prime_UTR | 30.0% | |
| CTTCTTTATATCCTTCTCTA+AGG | - | chr1_4:62268817-62268836 | None:intergenic | 30.0% | |
| AGAGAAGGATATAAAGAAGT+TGG | + | chr1_4:62268818-62268837 | Msa0176060:CDS | 30.0% | |
| CGCAGATAATTCTAATTTAC+TGG | + | chr1_4:62268884-62268903 | Msa0176060:CDS | 30.0% | |
| !! | CCTTTAACTTTTTGTTTCCA+AGG | - | chr1_4:62268929-62268948 | None:intergenic | 30.0% |
| CCTTGGAAACAAAAAGTTAA+AGG | + | chr1_4:62268926-62268945 | Msa0176060:CDS | 30.0% | |
| TGAAACATATAACCAAAGTC+AGG | + | chr1_4:62269040-62269059 | Msa0176060:CDS | 30.0% | |
| ATCACCACTAAGAAAATTTG+GGG | + | chr1_4:62269098-62269117 | Msa0176060:intron | 30.0% | |
| ! | GGAAGTAGTTTATATGCTTT+TGG | + | chr1_4:62269120-62269139 | Msa0176060:intron | 30.0% |
| CAAGAAAACACAACACAAAT+CGG | - | chr1_4:62269194-62269213 | None:intergenic | 30.0% | |
| ATAAATTGATGCAGTTACTG+AGG | - | chr1_4:62269226-62269245 | None:intergenic | 30.0% | |
| TCTGAAAATATTCAGACTCA+TGG | + | chr1_4:62269251-62269270 | Msa0176060:intron | 30.0% | |
| TATATTTATCAGCTTCATGC+AGG | - | chr1_4:62269410-62269429 | None:intergenic | 30.0% | |
| TGCATGAAGCTGATAAATAT+AGG | + | chr1_4:62269409-62269428 | Msa0176060:CDS | 30.0% | |
| ATCCAAGAATTCAGCAAAAA+AGG | + | chr1_4:62269634-62269653 | Msa0176060:CDS | 30.0% | |
| !!! | TTCCTTTTTTGCTGAATTCT+TGG | - | chr1_4:62269639-62269658 | None:intergenic | 30.0% |
| TTCTGACAAAAATTTCCCAA+AGG | - | chr1_4:62269702-62269721 | None:intergenic | 30.0% | |
| !! | AAAATTTTAGAAAGGGGGAA+GGG | - | chr1_4:62269837-62269856 | None:intergenic | 30.0% |
| !! | TAAAATTTTAGAAAGGGGGA+AGG | - | chr1_4:62269838-62269857 | None:intergenic | 30.0% |
| !!! | TGATCTTGTTTTGATTGACT+TGG | + | chr1_4:62269866-62269885 | Msa0176060:three_prime_UTR | 30.0% |
| TTCTTCTTCGAGGTATGTTA+TGG | + | chr1_4:62266504-62266523 | Msa0176060:intron | 35.0% | |
| TAAATAAGTATCCGGGACTT+GGG | - | chr1_4:62266708-62266727 | None:intergenic | 35.0% | |
| TTAAATAAGTATCCGGGACT+TGG | - | chr1_4:62266709-62266728 | None:intergenic | 35.0% | |
| GATATGTTATGTAACCACTC+TGG | + | chr1_4:62266786-62266805 | Msa0176060:intron | 35.0% | |
| ATGCATTCTGTTGTAAAAGG+TGG | + | chr1_4:62266865-62266884 | Msa0176060:five_prime_UTR | 35.0% | |
| ATTCTGTTGTAAAAGGTGGT+TGG | + | chr1_4:62266869-62266888 | Msa0176060:five_prime_UTR | 35.0% | |
| TAAAGAGGAAAGAAAGGCAA+TGG | + | chr1_4:62266957-62266976 | Msa0176060:five_prime_UTR | 35.0% | |
| ! | TCTGGCGAATGTTTTATGTT+TGG | + | chr1_4:62267036-62267055 | Msa0176060:intron | 35.0% |
| GAAAACAGTGGGAAAAATAC+TGG | + | chr1_4:62267284-62267303 | Msa0176060:intron | 35.0% | |
| CTAAAACATAGCACATTAGC+CGG | - | chr1_4:62267412-62267431 | None:intergenic | 35.0% | |
| ATCACTCGTGTATCAAACTT+AGG | - | chr1_4:62267435-62267454 | None:intergenic | 35.0% | |
| AGAATGTAGATCTGTGTGAA+TGG | + | chr1_4:62267634-62267653 | Msa0176060:intron | 35.0% | |
| ATGCACTGAGAAAATGTTCA+GGG | - | chr1_4:62268093-62268112 | None:intergenic | 35.0% | |
| TATCAGAAACAGAAAGCAGT+GGG | - | chr1_4:62268165-62268184 | None:intergenic | 35.0% | |
| TTATCAGAAACAGAAAGCAG+TGG | - | chr1_4:62268166-62268185 | None:intergenic | 35.0% | |
| TTATACTGAAACTGAGCATC+AGG | + | chr1_4:62268300-62268319 | Msa0176060:five_prime_UTR | 35.0% | |
| ATCAGAAACAACAGAAGCTT+CGG | - | chr1_4:62268386-62268405 | None:intergenic | 35.0% | |
| !! | AAGCTTCTGTTGTTTCTGAT+GGG | + | chr1_4:62268386-62268405 | Msa0176060:five_prime_UTR | 35.0% |
| AGCTTGAGATTGTTGACAAA+GGG | + | chr1_4:62268539-62268558 | Msa0176060:CDS | 35.0% | |
| TCAGGTATAGTAGCTTCAAT+GGG | - | chr1_4:62268607-62268626 | None:intergenic | 35.0% | |
| ! | AGAGCATTTACTTTAGCCAA+TGG | - | chr1_4:62268696-62268715 | None:intergenic | 35.0% |
| ACATTTCCATTGAGATCTGT+TGG | + | chr1_4:62268738-62268757 | Msa0176060:CDS | 35.0% | |
| AGGAATAGCAATGGAATAGA+AGG | + | chr1_4:62268762-62268781 | Msa0176060:CDS | 35.0% | |
| TAAAAAGGCTAACCTGACTT+TGG | - | chr1_4:62269055-62269074 | None:intergenic | 35.0% | |
| TCACCACTAAGAAAATTTGG+GGG | + | chr1_4:62269099-62269118 | Msa0176060:intron | 35.0% | |
| !! | ACTTTCTTTCTAGTTATGGG+AGG | + | chr1_4:62269321-62269340 | Msa0176060:intron | 35.0% |
| GCTGATAAATATAGGCTTGA+TGG | + | chr1_4:62269417-62269436 | Msa0176060:CDS | 35.0% | |
| !! | AGTTGTGTTGATTCTTCTCT+GGG | - | chr1_4:62269460-62269479 | None:intergenic | 35.0% |
| GAATCAACACAACTGTAGAT+AGG | + | chr1_4:62269466-62269485 | Msa0176060:CDS | 35.0% | |
| AGCTAACTTGACCTTTCTAA+TGG | + | chr1_4:62269582-62269601 | Msa0176060:intron | 35.0% | |
| AATAGAGCGAAAAGAGGATT+GGG | - | chr1_4:62269662-62269681 | None:intergenic | 35.0% | |
| ATGTGAAGTTATTCTTCAGC+AGG | - | chr1_4:62269799-62269818 | None:intergenic | 35.0% | |
| TGCTGAAGAATAACTTCACA+TGG | + | chr1_4:62269798-62269817 | Msa0176060:three_prime_UTR | 35.0% | |
| !! | AAATTTTAGAAAGGGGGAAG+GGG | - | chr1_4:62269836-62269855 | None:intergenic | 35.0% |
| !!! | TTTTGATTGACTTGGTTGTG+TGG | + | chr1_4:62269874-62269893 | Msa0176060:three_prime_UTR | 35.0% |
| GTGTGAAATCAGTGTGAAGA+AGG | - | chr1_4:62266467-62266486 | None:intergenic | 40.0% | |
| CGAAGAAGAAGAAGAAGAAG+AGG | - | chr1_4:62266494-62266513 | None:intergenic | 40.0% | |
| CTTCTTCTTCTTCTTCTTCG+AGG | + | chr1_4:62266494-62266513 | Msa0176060:five_prime_UTR | 40.0% | |
| AAATTATGGGCGACAGACTT+AGG | - | chr1_4:62266633-62266652 | None:intergenic | 40.0% | |
| CATACAGTAAGTATCCAGAG+TGG | - | chr1_4:62266803-62266822 | None:intergenic | 40.0% | |
| TCTGGATACTTACTGTATGC+AGG | + | chr1_4:62266804-62266823 | Msa0176060:intron | 40.0% | |
| CCAAGCAAAATGATTCCGAA+GGG | + | chr1_4:62266911-62266930 | Msa0176060:five_prime_UTR | 40.0% | |
| !! | ACGCTCTAAAGAGGAAAGAA+AGG | + | chr1_4:62266951-62266970 | Msa0176060:five_prime_UTR | 40.0% |
| GATAGATAAAAGAAGACGGG+AGG | + | chr1_4:62267176-62267195 | Msa0176060:intron | 40.0% | |
| AAACGTGCCTGACTTATTGT+AGG | + | chr1_4:62267334-62267353 | Msa0176060:intron | 40.0% | |
| AACGTGCCTGACTTATTGTA+GGG | + | chr1_4:62267335-62267354 | Msa0176060:intron | 40.0% | |
| AATACCCCCTACAATAAGTC+AGG | - | chr1_4:62267344-62267363 | None:intergenic | 40.0% | |
| AGTTTCCACTGTTTGACTCT+TGG | - | chr1_4:62267896-62267915 | None:intergenic | 40.0% | |
| CTTACACATAAAGAAGTCGG+TGG | + | chr1_4:62267930-62267949 | Msa0176060:five_prime_UTR | 40.0% | |
| TGGCTCTTTCTACACTGTAA+GGG | + | chr1_4:62267950-62267969 | Msa0176060:five_prime_UTR | 40.0% | |
| ACACTGTAAGGGAGATTGTA+CGG | + | chr1_4:62267961-62267980 | Msa0176060:five_prime_UTR | 40.0% | |
| TCCTGCTAAATTCAACTTGC+AGG | + | chr1_4:62268013-62268032 | Msa0176060:five_prime_UTR | 40.0% | |
| ! | TCCTGCAAGTTGAATTTAGC+AGG | - | chr1_4:62268017-62268036 | None:intergenic | 40.0% |
| GATGCACTGAGAAAATGTTC+AGG | - | chr1_4:62268094-62268113 | None:intergenic | 40.0% | |
| CTCAGTGCATCATCAAATGA+AGG | + | chr1_4:62268103-62268122 | Msa0176060:five_prime_UTR | 40.0% | |
| GAACTTTCTTGAGTTCAGGA+TGG | - | chr1_4:62268129-62268148 | None:intergenic | 40.0% | |
| ! | TCTGGAACTTTCTTGAGTTC+AGG | - | chr1_4:62268133-62268152 | None:intergenic | 40.0% |
| TTATACTGAAGCTGAGCATC+AGG | + | chr1_4:62268189-62268208 | Msa0176060:five_prime_UTR | 40.0% | |
| ! | TGTTGTTTGTCACATCGACA+TGG | - | chr1_4:62268357-62268376 | None:intergenic | 40.0% |
| !! | GAAGCTTCTGTTGTTTCTGA+TGG | + | chr1_4:62268385-62268404 | Msa0176060:five_prime_UTR | 40.0% |
| ! | GTTTCTGATGGGCATTATAC+TGG | + | chr1_4:62268397-62268416 | Msa0176060:five_prime_UTR | 40.0% |
| TTTGTCAACAACCTTGAGCT+CGG | - | chr1_4:62268425-62268444 | None:intergenic | 40.0% | |
| AGCTCAAGGTTGTTGACAAA+GGG | + | chr1_4:62268425-62268444 | Msa0176060:five_prime_UTR | 40.0% | |
| CAAGGAATCTGTTGAAGCTT+CGG | + | chr1_4:62268483-62268502 | Msa0176060:CDS | 40.0% | |
| GAGCTTGAGATTGTTGACAA+AGG | + | chr1_4:62268538-62268557 | Msa0176060:CDS | 40.0% | |
| CTCAGGTATAGTAGCTTCAA+TGG | - | chr1_4:62268608-62268627 | None:intergenic | 40.0% | |
| !! | GACATTCAGTTTGGTTCTGT+GGG | - | chr1_4:62268646-62268665 | None:intergenic | 40.0% |
| CTCTTGTTCGACATTCAGTT+TGG | - | chr1_4:62268655-62268674 | None:intergenic | 40.0% | |
| ACTGAATGTCGAACAAGAGT+TGG | + | chr1_4:62268656-62268675 | Msa0176060:intron | 40.0% | |
| TACTTTAGCCAATGGTACTG+TGG | - | chr1_4:62268688-62268707 | None:intergenic | 40.0% | |
| TTCCATTGAGATCTGTTGGT+AGG | + | chr1_4:62268742-62268761 | Msa0176060:CDS | 40.0% | |
| TTCCTACCAACAGATCTCAA+TGG | - | chr1_4:62268747-62268766 | None:intergenic | 40.0% | |
| ! | TCTGTTGGTAGGAATAGCAA+TGG | + | chr1_4:62268753-62268772 | Msa0176060:CDS | 40.0% |
| AGCAATGGAATAGAAGGTTC+AGG | + | chr1_4:62268768-62268787 | Msa0176060:CDS | 40.0% | |
| TAGAAGGTTCAGGAGAATTG+AGG | + | chr1_4:62268778-62268797 | Msa0176060:CDS | 40.0% | |
| AGAAGGTTCAGGAGAATTGA+GGG | + | chr1_4:62268779-62268798 | Msa0176060:CDS | 40.0% | |
| CTCTGGTAATTCCTTAGAGA+AGG | + | chr1_4:62268803-62268822 | Msa0176060:CDS | 40.0% | |
| TAAAGGAAATCTCCAACCCT+AGG | + | chr1_4:62268943-62268962 | Msa0176060:CDS | 40.0% | |
| !! | TGCACTGACTTGTTCTTTGT+GGG | - | chr1_4:62268997-62269016 | None:intergenic | 40.0% |
| !! | ATGCACTGACTTGTTCTTTG+TGG | - | chr1_4:62268998-62269017 | None:intergenic | 40.0% |
| ! | CTTCCCCCAAATTTTCTTAG+TGG | - | chr1_4:62269105-62269124 | None:intergenic | 40.0% |
| ! | TATAGGCTTGATGGTCAACT+TGG | + | chr1_4:62269426-62269445 | Msa0176060:CDS | 40.0% |
| !! | CAGTTGTGTTGATTCTTCTC+TGG | - | chr1_4:62269461-62269480 | None:intergenic | 40.0% |
| CTGCAGTGAAACCATTAGAA+AGG | - | chr1_4:62269596-62269615 | None:intergenic | 40.0% | |
| CAATAGAGCGAAAAGAGGAT+TGG | - | chr1_4:62269663-62269682 | None:intergenic | 40.0% | |
| GCTTTCAATAGAGCGAAAAG+AGG | - | chr1_4:62269668-62269687 | None:intergenic | 40.0% | |
| AAAGCCATTGTCAATGCCTT+TGG | + | chr1_4:62269683-62269702 | Msa0176060:CDS | 40.0% | |
| AAGCCATTGTCAATGCCTTT+GGG | + | chr1_4:62269684-62269703 | Msa0176060:CDS | 40.0% | |
| !! | TTTCCCAAAGGCATTGACAA+TGG | - | chr1_4:62269690-62269709 | None:intergenic | 40.0% |
| ! | GCTATTATCTACGCTGATTG+TGG | + | chr1_4:62269758-62269777 | Msa0176060:three_prime_UTR | 40.0% |
| GTTGTGTGGTATGACTATGA+GGG | + | chr1_4:62269888-62269907 | Msa0176060:three_prime_UTR | 40.0% | |
| ACGCTACTCGACAATAGTGA+CGG | - | chr1_4:62266417-62266436 | None:intergenic | 45.0% | |
| ! | GTAGCGAGGGTTTGGATTTT+GGG | + | chr1_4:62266435-62266454 | Msa0176060:five_prime_UTR | 45.0% |
| ! | TAGCGAGGGTTTGGATTTTG+GGG | + | chr1_4:62266436-62266455 | Msa0176060:five_prime_UTR | 45.0% |
| CTACAAACTAACCCAAGTCC+CGG | + | chr1_4:62266694-62266713 | Msa0176060:intron | 45.0% | |
| CTGTTGTAAAAGGTGGTTGG+AGG | + | chr1_4:62266872-62266891 | Msa0176060:five_prime_UTR | 45.0% | |
| TGCTTGGCAAGAGCAAATGT+TGG | - | chr1_4:62266898-62266917 | None:intergenic | 45.0% | |
| GCCAAGCAAAATGATTCCGA+AGG | + | chr1_4:62266910-62266929 | Msa0176060:five_prime_UTR | 45.0% | |
| ! | CCCTTCGGAATCATTTTGCT+TGG | - | chr1_4:62266914-62266933 | None:intergenic | 45.0% |
| ATTCCGAAGGGAGAAAGACT+CGG | + | chr1_4:62266923-62266942 | Msa0176060:five_prime_UTR | 45.0% | |
| AATCCGAGTCTTTCTCCCTT+CGG | - | chr1_4:62266929-62266948 | None:intergenic | 45.0% | |
| AGATAAAAGAAGACGGGAGG+CGG | + | chr1_4:62267179-62267198 | Msa0176060:intron | 45.0% | |
| ! | AGGCGGTGTTTTCAGAAACA+AGG | + | chr1_4:62267196-62267215 | Msa0176060:intron | 45.0% |
| ACGTGCCTGACTTATTGTAG+GGG | + | chr1_4:62267336-62267355 | Msa0176060:intron | 45.0% | |
| AGGTACCAAGAGTCAAACAG+TGG | + | chr1_4:62267888-62267907 | Msa0176060:intron | 45.0% | |
| GTGGCTCTTTCTACACTGTA+AGG | + | chr1_4:62267949-62267968 | Msa0176060:five_prime_UTR | 45.0% | |
| CACTGTAAGGGAGATTGTAC+GGG | + | chr1_4:62267962-62267981 | Msa0176060:five_prime_UTR | 45.0% | |
| CACTTGCAATTGAACCCAAC+GGG | - | chr1_4:62268070-62268089 | None:intergenic | 45.0% | |
| GCACTTGCAATTGAACCCAA+CGG | - | chr1_4:62268071-62268090 | None:intergenic | 45.0% | |
| AGCAGTGGGTCATTTGTATC+TGG | - | chr1_4:62268151-62268170 | None:intergenic | 45.0% | |
| GATGGGCATGTCATAGATGT+TGG | + | chr1_4:62268220-62268239 | Msa0176060:five_prime_UTR | 45.0% | |
| TACTGAAACTGAGCATCAGG+TGG | + | chr1_4:62268303-62268322 | Msa0176060:five_prime_UTR | 45.0% | |
| AGCATCAGGTGGTTGACAAT+GGG | + | chr1_4:62268314-62268333 | Msa0176060:five_prime_UTR | 45.0% | |
| GACAATGGGCATGTCGTAAA+TGG | + | chr1_4:62268328-62268347 | Msa0176060:five_prime_UTR | 45.0% | |
| TTATACTGGAACCGAGCTCA+AGG | + | chr1_4:62268411-62268430 | Msa0176060:five_prime_UTR | 45.0% | |
| GAGCTCAAGGTTGTTGACAA+AGG | + | chr1_4:62268424-62268443 | Msa0176060:five_prime_UTR | 45.0% | |
| ! | CCTTGTTTGTCATGTCTACC+TGG | - | chr1_4:62268468-62268487 | None:intergenic | 45.0% |
| CCAGGTAGACATGACAAACA+AGG | + | chr1_4:62268465-62268484 | Msa0176060:exon | 45.0% | |
| GAGATTGTTGACAAAGGGCA+TGG | + | chr1_4:62268544-62268563 | Msa0176060:CDS | 45.0% | |
| CGCGGTAGATGTGATAAACA+AGG | + | chr1_4:62268579-62268598 | Msa0176060:CDS | 45.0% | |
| AGCTACTATACCTGAGATGC+AGG | + | chr1_4:62268612-62268631 | Msa0176060:CDS | 45.0% | |
| GGTTTACTTACCTGCATCTC+AGG | - | chr1_4:62268625-62268644 | None:intergenic | 45.0% | |
| !! | CGACATTCAGTTTGGTTCTG+TGG | - | chr1_4:62268647-62268666 | None:intergenic | 45.0% |
| GAGAAATTTGAGAGTCCCCT+TGG | + | chr1_4:62268909-62268928 | Msa0176060:CDS | 45.0% | |
| CACTTTCCGTATCATGCCTA+GGG | - | chr1_4:62268962-62268981 | None:intergenic | 45.0% | |
| GATGCAGTTACTGAGGTATG+AGG | - | chr1_4:62269219-62269238 | None:intergenic | 45.0% | |
| GTTTCACTGCAGAGAGTCAT+GGG | + | chr1_4:62269604-62269623 | Msa0176060:intron | 45.0% | |
| GGTTGTGTGGTATGACTATG+AGG | + | chr1_4:62269887-62269906 | Msa0176060:three_prime_UTR | 45.0% | |
| !!! | TAATTTTAAAAACTAAATTA+TGG | - | chr1_4:62269079-62269098 | None:intergenic | 5.0% |
| TATTGTCGAGTAGCGTAGCG+AGG | + | chr1_4:62266421-62266440 | Msa0176060:five_prime_UTR | 50.0% | |
| ATTGTCGAGTAGCGTAGCGA+GGG | + | chr1_4:62266422-62266441 | Msa0176060:five_prime_UTR | 50.0% | |
| ! | CGTAGCGAGGGTTTGGATTT+TGG | + | chr1_4:62266434-62266453 | Msa0176060:five_prime_UTR | 50.0% |
| !! | TCGGATTCGACGCTCTAAAG+AGG | + | chr1_4:62266942-62266961 | Msa0176060:five_prime_UTR | 50.0% |
| CGTGCCTGACTTATTGTAGG+GGG | + | chr1_4:62267337-62267356 | Msa0176060:intron | 50.0% | |
| TACTGAAGCTGAGCATCAGG+TGG | + | chr1_4:62268192-62268211 | Msa0176060:five_prime_UTR | 50.0% | |
| AGCATCAGGTGGTTGACGAT+GGG | + | chr1_4:62268203-62268222 | Msa0176060:five_prime_UTR | 50.0% | |
| AGCGACAACAGTGGCTTCAA+TGG | - | chr1_4:62268272-62268291 | None:intergenic | 50.0% | |
| ACTCTCATCAGCGACAACAG+TGG | - | chr1_4:62268281-62268300 | None:intergenic | 50.0% | |
| GAGCATCAGGTGGTTGACAA+TGG | + | chr1_4:62268313-62268332 | Msa0176060:five_prime_UTR | 50.0% | |
| TCAGGAGAATTGAGGGACTC+TGG | + | chr1_4:62268786-62268805 | Msa0176060:CDS | 50.0% | |
| CTCCAACCCTAGGCATGATA+CGG | + | chr1_4:62268953-62268972 | Msa0176060:CDS | 50.0% | |
| TTCCGTATCATGCCTAGGGT+TGG | - | chr1_4:62268958-62268977 | None:intergenic | 50.0% | |
| GCACTTTCCGTATCATGCCT+AGG | - | chr1_4:62268963-62268982 | None:intergenic | 50.0% | |
| ! | AGGCTTGATGGTCAACTTGG+TGG | + | chr1_4:62269429-62269448 | Msa0176060:CDS | 50.0% |
| GGTTTCACTGCAGAGAGTCA+TGG | + | chr1_4:62269603-62269622 | Msa0176060:intron | 50.0% | |
| TGTGGTATGACTATGAGGGC+AGG | + | chr1_4:62269892-62269911 | Msa0176060:three_prime_UTR | 50.0% | |
| GTGGTATGACTATGAGGGCA+GGG | + | chr1_4:62269893-62269912 | Msa0176060:three_prime_UTR | 50.0% | |
| GAGCATCAGGTGGTTGACGA+TGG | + | chr1_4:62268202-62268221 | Msa0176060:five_prime_UTR | 55.0% | |
| GCGCAGCATAGATACTAGCC+AGG | + | chr1_4:62268447-62268466 | Msa0176060:five_prime_UTR | 55.0% | |
| ! | GACAAAGGGCATGGCATCGA+TGG | + | chr1_4:62268553-62268572 | Msa0176060:CDS | 55.0% |
| GGCAGCTACCACAGTACCAT+TGG | + | chr1_4:62268677-62268696 | Msa0176060:CDS | 55.0% | |
| CGAGTAGCGTAGCGAGGGTT+TGG | + | chr1_4:62266427-62266446 | Msa0176060:five_prime_UTR | 60.0% | |
| !! | GCATGGCATCGATGGCAGCG+CGG | + | chr1_4:62268561-62268580 | Msa0176060:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 62266410 | 62269958 | 62266410 | ID=Msa0176060;Name=Msa0176060 |
| chr1_4 | mRNA | 62266410 | 62269958 | 62266410 | ID=Msa0176060-mRNA-1;Parent=Msa0176060;Name=Msa0176060-mRNA-1;_AED=0.03;_eAED=0.03;_QI=864|1|1|1|0.8|0.66|6|234|260 |
| chr1_4 | exon | 62266410 | 62266515 | 62266410 | ID=Msa0176060-mRNA-1:exon:19939;Parent=Msa0176060-mRNA-1 |
| chr1_4 | exon | 62266826 | 62266998 | 62266826 | ID=Msa0176060-mRNA-1:exon:19940;Parent=Msa0176060-mRNA-1 |
| chr1_4 | exon | 62267890 | 62268648 | 62267890 | ID=Msa0176060-mRNA-1:exon:19941;Parent=Msa0176060-mRNA-1 |
| chr1_4 | exon | 62268672 | 62269061 | 62268672 | ID=Msa0176060-mRNA-1:exon:19942;Parent=Msa0176060-mRNA-1 |
| chr1_4 | exon | 62269387 | 62269496 | 62269387 | ID=Msa0176060-mRNA-1:exon:19943;Parent=Msa0176060-mRNA-1 |
| chr1_4 | exon | 62269616 | 62269958 | 62269616 | ID=Msa0176060-mRNA-1:exon:19944;Parent=Msa0176060-mRNA-1 |
| chr1_4 | five_prime_UTR | 62266410 | 62266515 | 62266410 | ID=Msa0176060-mRNA-1:five_prime_utr;Parent=Msa0176060-mRNA-1 |
| chr1_4 | five_prime_UTR | 62266826 | 62266998 | 62266826 | ID=Msa0176060-mRNA-1:five_prime_utr;Parent=Msa0176060-mRNA-1 |
| chr1_4 | five_prime_UTR | 62267890 | 62268474 | 62267890 | ID=Msa0176060-mRNA-1:five_prime_utr;Parent=Msa0176060-mRNA-1 |
| chr1_4 | CDS | 62268475 | 62268648 | 62268475 | ID=Msa0176060-mRNA-1:cds;Parent=Msa0176060-mRNA-1 |
| chr1_4 | CDS | 62268672 | 62269061 | 62268672 | ID=Msa0176060-mRNA-1:cds;Parent=Msa0176060-mRNA-1 |
| chr1_4 | CDS | 62269387 | 62269496 | 62269387 | ID=Msa0176060-mRNA-1:cds;Parent=Msa0176060-mRNA-1 |
| chr1_4 | CDS | 62269616 | 62269724 | 62269616 | ID=Msa0176060-mRNA-1:cds;Parent=Msa0176060-mRNA-1 |
| chr1_4 | three_prime_UTR | 62269725 | 62269958 | 62269725 | ID=Msa0176060-mRNA-1:three_prime_utr;Parent=Msa0176060-mRNA-1 |
| Gene Sequence |
| Protein sequence |
