Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1262590 | XP_012573466.1 | 86.331 | 139 | 19 | 0 | 1 | 139 | 1 | 139 | 1.22e-77 | 236 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1262590 | sp|P93092|ACP1_CASGL | 70.290 | 138 | 38 | 2 | 1 | 138 | 1 | 135 | 2.22e-60 | 185 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003080 | Msa1262590 | 0.833841 | 4.230233e-56 | -8.615850e-47 |
| Msa0005020 | Msa1262590 | 0.806521 | 7.902480e-50 | -8.615850e-47 |
| Msa0014770 | Msa1262590 | 0.852524 | 4.363264e-61 | -8.615850e-47 |
| Msa0025160 | Msa1262590 | 0.859282 | 4.607047e-63 | -8.615850e-47 |
| Msa0032460 | Msa1262590 | 0.800586 | 1.344362e-48 | -8.615850e-47 |
| Msa0035270 | Msa1262590 | 0.851215 | 1.025868e-60 | -8.615850e-47 |
| Msa0035340 | Msa1262590 | 0.825467 | 4.612994e-54 | -8.615850e-47 |
| Msa0035380 | Msa1262590 | 0.822900 | 1.849731e-53 | -8.615850e-47 |
| Msa0037740 | Msa1262590 | 0.801698 | 7.964905e-49 | -8.615850e-47 |
| Msa0044160 | Msa1262590 | 0.844269 | 8.394431e-59 | -8.615850e-47 |
| Msa0050150 | Msa1262590 | 0.810494 | 1.121216e-50 | -8.615850e-47 |
| Msa0053070 | Msa1262590 | 0.802128 | 6.497886e-49 | -8.615850e-47 |
| Msa0062340 | Msa1262590 | 0.816857 | 4.455614e-52 | -8.615850e-47 |
| Msa0072520 | Msa1262590 | 0.861600 | 9.155728e-64 | -8.615850e-47 |
| Msa0077340 | Msa1262590 | 0.811672 | 6.228010e-51 | -8.615850e-47 |
| Msa0077560 | Msa1262590 | 0.829515 | 4.931562e-55 | -8.615850e-47 |
| Msa0078500 | Msa1262590 | 0.821875 | 3.200052e-53 | -8.615850e-47 |
| Msa0098410 | Msa1262590 | 0.805204 | 1.494395e-49 | -8.615850e-47 |
| Msa0108630 | Msa1262590 | 0.836961 | 6.884760e-57 | -8.615850e-47 |
| Msa0606580 | Msa1262590 | 0.806725 | 7.153693e-50 | -8.615850e-47 |
| Msa0607800 | Msa1262590 | 0.871416 | 6.951595e-67 | -8.615850e-47 |
| Msa0615630 | Msa1262590 | 0.801025 | 1.094006e-48 | -8.615850e-47 |
| Msa0617940 | Msa1262590 | 0.803960 | 2.716916e-49 | -8.615850e-47 |
| Msa0619710 | Msa1262590 | 0.808353 | 3.228979e-50 | -8.615850e-47 |
| Msa0620500 | Msa1262590 | 0.806085 | 9.762169e-50 | -8.615850e-47 |
| Msa0620510 | Msa1262590 | 0.820714 | 5.928405e-53 | -8.615850e-47 |
| Msa0621710 | Msa1262590 | 0.805521 | 1.282411e-49 | -8.615850e-47 |
| Msa0625620 | Msa1262590 | 0.804762 | 1.848555e-49 | -8.615850e-47 |
| Msa0630440 | Msa1262590 | 0.802551 | 5.316001e-49 | -8.615850e-47 |
| Msa0647280 | Msa1262590 | 0.813418 | 2.585298e-51 | -8.615850e-47 |
| Msa0648040 | Msa1262590 | 0.868058 | 8.652710e-66 | -8.615850e-47 |
| Msa0657700 | Msa1262590 | 0.800369 | 1.488678e-48 | -8.615850e-47 |
| Msa0657710 | Msa1262590 | 0.806891 | 6.600059e-50 | -8.615850e-47 |
| Msa0658640 | Msa1262590 | 0.804557 | 2.040445e-49 | -8.615850e-47 |
| Msa0682770 | Msa1262590 | 0.815045 | 1.130407e-51 | -8.615850e-47 |
| Msa0686800 | Msa1262590 | 0.806958 | 6.386744e-50 | -8.615850e-47 |
| Msa0687090 | Msa1262590 | 0.842903 | 1.945900e-58 | -8.615850e-47 |
| Msa0688380 | Msa1262590 | 0.813389 | 2.623990e-51 | -8.615850e-47 |
| Msa0690740 | Msa1262590 | 0.862446 | 5.040159e-64 | -8.615850e-47 |
| Msa0692790 | Msa1262590 | 0.827040 | 1.948972e-54 | -8.615850e-47 |
| Msa0702800 | Msa1262590 | 0.802228 | 6.198674e-49 | -8.615850e-47 |
| Msa0703600 | Msa1262590 | 0.805679 | 1.188400e-49 | -8.615850e-47 |
| Msa0703950 | Msa1262590 | 0.821627 | 3.650807e-53 | -8.615850e-47 |
| Msa0706150 | Msa1262590 | 0.801936 | 7.115814e-49 | -8.615850e-47 |
| Msa0707260 | Msa1262590 | 0.801129 | 1.041561e-48 | -8.615850e-47 |
| Msa0709200 | Msa1262590 | 0.808660 | 2.777243e-50 | -8.615850e-47 |
| Msa0709440 | Msa1262590 | 0.843358 | 1.471936e-58 | -8.615850e-47 |
| Msa0714520 | Msa1262590 | 0.825299 | 5.057142e-54 | -8.615850e-47 |
| Msa0716480 | Msa1262590 | 0.831447 | 1.660552e-55 | -8.615850e-47 |
| Msa0722890 | Msa1262590 | 0.821203 | 4.574823e-53 | -8.615850e-47 |
| Msa0723090 | Msa1262590 | 0.828880 | 7.030521e-55 | -8.615850e-47 |
| Msa0730930 | Msa1262590 | 0.826380 | 2.801241e-54 | -8.615850e-47 |
| Msa0735780 | Msa1262590 | 0.824496 | 7.820199e-54 | -8.615850e-47 |
| Msa0743440 | Msa1262590 | 0.802668 | 5.028970e-49 | -8.615850e-47 |
| Msa0747000 | Msa1262590 | 0.824381 | 8.325545e-54 | -8.615850e-47 |
| Msa0752780 | Msa1262590 | 0.817795 | 2.740348e-52 | -8.615850e-47 |
| Msa0756330 | Msa1262590 | 0.804840 | 1.780785e-49 | -8.615850e-47 |
| Msa0758650 | Msa1262590 | 0.800563 | 1.359410e-48 | -8.615850e-47 |
| Msa0780910 | Msa1262590 | 0.850457 | 1.677489e-60 | -8.615850e-47 |
| Msa0811690 | Msa1262590 | 0.825039 | 5.825430e-54 | -8.615850e-47 |
| Msa0816080 | Msa1262590 | 0.800156 | 1.644942e-48 | -8.615850e-47 |
| Msa0818880 | Msa1262590 | 0.818719 | 1.692569e-52 | -8.615850e-47 |
| Msa0821160 | Msa1262590 | 0.857603 | 1.458304e-62 | -8.615850e-47 |
| Msa0828960 | Msa1262590 | 0.809574 | 1.769214e-50 | -8.615850e-47 |
| Msa0837460 | Msa1262590 | 0.836175 | 1.091777e-56 | -8.615850e-47 |
| Msa0123070 | Msa1262590 | 0.820028 | 8.517653e-53 | -8.615850e-47 |
| Msa0124910 | Msa1262590 | 0.806298 | 8.805507e-50 | -8.615850e-47 |
| Msa0125360 | Msa1262590 | 0.811537 | 6.662069e-51 | -8.615850e-47 |
| Msa0125590 | Msa1262590 | 0.807709 | 4.427460e-50 | -8.615850e-47 |
| Msa0126210 | Msa1262590 | 0.831084 | 2.039091e-55 | -8.615850e-47 |
| Msa0127770 | Msa1262590 | 0.836871 | 7.259231e-57 | -8.615850e-47 |
| Msa0129380 | Msa1262590 | 0.829590 | 4.728146e-55 | -8.615850e-47 |
| Msa0146650 | Msa1262590 | 0.836545 | 8.789838e-57 | -8.615850e-47 |
| Msa0173250 | Msa1262590 | 0.807712 | 4.422007e-50 | -8.615850e-47 |
| Msa0173290 | Msa1262590 | 0.804580 | 2.017947e-49 | -8.615850e-47 |
| Msa0176060 | Msa1262590 | 0.845226 | 4.634171e-59 | -8.615850e-47 |
| Msa0183710 | Msa1262590 | 0.841995 | 3.387925e-58 | -8.615850e-47 |
| Msa0184500 | Msa1262590 | 0.804640 | 1.960505e-49 | -8.615850e-47 |
| Msa0185960 | Msa1262590 | 0.807711 | 4.424086e-50 | -8.615850e-47 |
| Msa0190730 | Msa1262590 | 0.818615 | 1.787447e-52 | -8.615850e-47 |
| Msa0203080 | Msa1262590 | 0.825461 | 4.628112e-54 | -8.615850e-47 |
| Msa0218020 | Msa1262590 | 0.807315 | 5.368174e-50 | -8.615850e-47 |
| Msa0233020 | Msa1262590 | 0.801297 | 9.620816e-49 | -8.615850e-47 |
| Msa1240940 | Msa1262590 | 0.827633 | 1.405025e-54 | -8.615850e-47 |
| Msa1250660 | Msa1262590 | 0.800602 | 1.334153e-48 | -8.615850e-47 |
| Msa1254420 | Msa1262590 | 0.809473 | 1.859880e-50 | -8.615850e-47 |
| Msa1254540 | Msa1262590 | 0.851147 | 1.072219e-60 | -8.615850e-47 |
| Msa1262590 | Msa1263780 | 0.809426 | 1.903329e-50 | -8.615850e-47 |
| Msa1262590 | Msa1282300 | 0.830575 | 2.719270e-55 | -8.615850e-47 |
| Msa1262590 | Msa1294280 | 0.806222 | 9.135450e-50 | -8.615850e-47 |
| Msa1262590 | Msa1294460 | 0.816190 | 6.281856e-52 | -8.615850e-47 |
| Msa1262590 | Msa1302260 | 0.813662 | 2.285453e-51 | -8.615850e-47 |
| Msa1262590 | Msa1306570 | 0.874908 | 4.675393e-68 | -8.615850e-47 |
| Msa1262590 | Msa1321530 | 0.830861 | 2.313410e-55 | -8.615850e-47 |
| Msa1262590 | Msa1332650 | 0.885156 | 1.036884e-71 | -8.615850e-47 |
| Msa1262590 | Msa1332950 | 0.842327 | 2.767641e-58 | -8.615850e-47 |
| Msa1262590 | Msa1333500 | 0.807050 | 6.106986e-50 | -8.615850e-47 |
| Msa1262590 | Msa1342810 | 0.804297 | 2.311659e-49 | -8.615850e-47 |
| Msa1262590 | Msa1349690 | 0.838896 | 2.189530e-57 | -8.615850e-47 |
| Msa1262590 | Msa1358290 | 0.828740 | 7.600522e-55 | -8.615850e-47 |
| Msa1262590 | Msa1364680 | 0.803751 | 3.002203e-49 | -8.615850e-47 |
| Msa1262590 | Msa1366150 | 0.803720 | 3.046934e-49 | -8.615850e-47 |
| Msa1262590 | Msa1368750 | 0.863217 | 2.913901e-64 | -8.615850e-47 |
| Msa1262590 | Msa1374790 | 0.865432 | 5.931402e-65 | -8.615850e-47 |
| Msa1262590 | Msa1375350 | 0.873725 | 1.176977e-67 | -8.615850e-47 |
| Msa1262590 | Msa1383310 | 0.813034 | 3.139918e-51 | -8.615850e-47 |
| Msa1262590 | Msa1387440 | 0.808852 | 2.526987e-50 | -8.615850e-47 |
| Msa1262590 | Msa1387500 | 0.806213 | 9.173263e-50 | -8.615850e-47 |
| Msa1262590 | Msa1392740 | 0.836910 | 7.093305e-57 | -8.615850e-47 |
| Msa1262590 | Msa1393560 | 0.800653 | 1.302807e-48 | -8.615850e-47 |
| Msa1262590 | Msa1393780 | 0.806545 | 7.808253e-50 | -8.615850e-47 |
| Msa1262590 | Msa1402010 | 0.815148 | 1.072653e-51 | -8.615850e-47 |
| Msa1262590 | Msa1405460 | 0.814871 | 1.235669e-51 | -8.615850e-47 |
| Msa1262590 | Msa1407840 | 0.810796 | 9.645462e-51 | -8.615850e-47 |
| Msa1262590 | Msa1409410 | 0.816821 | 4.537218e-52 | -8.615850e-47 |
| Msa1262590 | Msa1411790 | 0.841495 | 4.591547e-58 | -8.615850e-47 |
| Msa1262590 | Msa1414170 | 0.822871 | 1.878491e-53 | -8.615850e-47 |
| Msa1262590 | Msa1431480 | 0.833781 | 4.377209e-56 | -8.615850e-47 |
| Msa1262590 | Msa1433360 | 0.808780 | 2.617648e-50 | -8.615850e-47 |
| Msa1262590 | Msa1437810 | 0.809573 | 1.769957e-50 | -8.615850e-47 |
| Msa1262590 | Msa1447100 | 0.841001 | 6.191769e-58 | -8.615850e-47 |
| Msa1262590 | Msa1449900 | 0.841487 | 4.613326e-58 | -8.615850e-47 |
| Msa1262590 | Msa1451820 | 0.868028 | 8.852034e-66 | -8.615850e-47 |
| Msa1262590 | Msa1454500 | 0.812591 | 3.925991e-51 | -8.615850e-47 |
| Msa1262590 | Msa1462490 | 0.817054 | 4.022773e-52 | -8.615850e-47 |
| Msa0367520 | Msa1262590 | 0.829761 | 4.295988e-55 | -8.615850e-47 |
| Msa0375640 | Msa1262590 | 0.833903 | 4.080360e-56 | -8.615850e-47 |
| Msa0377710 | Msa1262590 | 0.810874 | 9.276557e-51 | -8.615850e-47 |
| Msa0401060 | Msa1262590 | 0.855579 | 5.737921e-62 | -8.615850e-47 |
| Msa0421130 | Msa1262590 | 0.829009 | 6.542013e-55 | -8.615850e-47 |
| Msa0422050 | Msa1262590 | 0.812380 | 4.365249e-51 | -8.615850e-47 |
| Msa0424140 | Msa1262590 | 0.806410 | 8.336641e-50 | -8.615850e-47 |
| Msa0424160 | Msa1262590 | 0.834927 | 2.257909e-56 | -8.615850e-47 |
| Msa0431200 | Msa1262590 | 0.823020 | 1.733802e-53 | -8.615850e-47 |
| Msa0432010 | Msa1262590 | 0.865346 | 6.314221e-65 | -8.615850e-47 |
| Msa0437480 | Msa1262590 | 0.819175 | 1.333442e-52 | -8.615850e-47 |
| Msa0437520 | Msa1262590 | 0.836630 | 8.358874e-57 | -8.615850e-47 |
| Msa0440350 | Msa1262590 | 0.833469 | 5.239628e-56 | -8.615850e-47 |
| Msa0447870 | Msa1262590 | 0.810388 | 1.181444e-50 | -8.615850e-47 |
| Msa0466880 | Msa1262590 | 0.838988 | 2.073461e-57 | -8.615850e-47 |
| Msa0468700 | Msa1262590 | 0.840589 | 7.939740e-58 | -8.615850e-47 |
| Msa0481890 | Msa1262590 | 0.842943 | 1.899158e-58 | -8.615850e-47 |
| Msa0980290 | Msa1262590 | 0.849367 | 3.383547e-60 | -8.615850e-47 |
| Msa1002640 | Msa1262590 | 0.818155 | 2.271415e-52 | -8.615850e-47 |
| Msa1019180 | Msa1262590 | 0.804905 | 1.725498e-49 | -8.615850e-47 |
| Msa1019200 | Msa1262590 | 0.812113 | 4.990743e-51 | -8.615850e-47 |
| Msa1025560 | Msa1262590 | 0.823843 | 1.113709e-53 | -8.615850e-47 |
| Msa1033920 | Msa1262590 | 0.825423 | 4.725998e-54 | -8.615850e-47 |
| Msa1034600 | Msa1262590 | 0.822665 | 2.097381e-53 | -8.615850e-47 |
| Msa1035570 | Msa1262590 | 0.818879 | 1.557019e-52 | -8.615850e-47 |
| Msa1035610 | Msa1262590 | 0.836082 | 1.152863e-56 | -8.615850e-47 |
| Msa1042160 | Msa1262590 | 0.816293 | 5.958210e-52 | -8.615850e-47 |
| Msa1042190 | Msa1262590 | 0.817042 | 4.049087e-52 | -8.615850e-47 |
| Msa1042880 | Msa1262590 | 0.819629 | 1.050717e-52 | -8.615850e-47 |
| Msa1044250 | Msa1262590 | 0.840923 | 6.489583e-58 | -8.615850e-47 |
| Msa1074600 | Msa1262590 | 0.811133 | 8.152418e-51 | -8.615850e-47 |
| Msa1081970 | Msa1262590 | 0.825723 | 4.012463e-54 | -8.615850e-47 |
| Msa1084530 | Msa1262590 | 0.839060 | 1.985373e-57 | -8.615850e-47 |
| Msa1104110 | Msa1262590 | 0.897759 | 1.029194e-76 | -8.615850e-47 |
| Msa1106590 | Msa1262590 | 0.807415 | 5.112681e-50 | -8.615850e-47 |
| Msa0246210 | Msa1262590 | 0.802083 | 6.639117e-49 | -8.615850e-47 |
| Msa0269210 | Msa1262590 | 0.800095 | 1.692634e-48 | -8.615850e-47 |
| Msa0281470 | Msa1262590 | 0.804791 | 1.823360e-49 | -8.615850e-47 |
| Msa0284800 | Msa1262590 | 0.830449 | 2.918721e-55 | -8.615850e-47 |
| Msa0330520 | Msa1262590 | 0.847490 | 1.119215e-59 | -8.615850e-47 |
| Msa0331110 | Msa1262590 | 0.856750 | 2.604447e-62 | -8.615850e-47 |
| Msa0334660 | Msa1262590 | 0.802996 | 4.303267e-49 | -8.615850e-47 |
| Msa0354840 | Msa1262590 | 0.828981 | 6.644295e-55 | -8.615850e-47 |
| Msa1125820 | Msa1262590 | 0.845388 | 4.189150e-59 | -8.615850e-47 |
| Msa1125990 | Msa1262590 | 0.846856 | 1.669650e-59 | -8.615850e-47 |
| Msa1132530 | Msa1262590 | 0.842970 | 1.867145e-58 | -8.615850e-47 |
| Msa1147700 | Msa1262590 | 0.903013 | 5.378525e-79 | -8.615850e-47 |
| Msa1147910 | Msa1262590 | 0.804053 | 2.597567e-49 | -8.615850e-47 |
| Msa1167470 | Msa1262590 | 0.818397 | 2.002994e-52 | -8.615850e-47 |
| Msa1171290 | Msa1262590 | 0.838213 | 3.286750e-57 | -8.615850e-47 |
| Msa1188340 | Msa1262590 | 0.812768 | 3.591182e-51 | -8.615850e-47 |
| Msa1190390 | Msa1262590 | 0.800943 | 1.136726e-48 | -8.615850e-47 |
| Msa1201780 | Msa1262590 | 0.808132 | 3.598940e-50 | -8.615850e-47 |
| Msa1205110 | Msa1262590 | 0.813667 | 2.278886e-51 | -8.615850e-47 |
| Msa1215980 | Msa1262590 | 0.805097 | 1.573228e-49 | -8.615850e-47 |
| Msa1215990 | Msa1262590 | 0.821384 | 4.155310e-53 | -8.615850e-47 |
| Msa1216340 | Msa1262590 | 0.832103 | 1.144387e-55 | -8.615850e-47 |
| Msa1217050 | Msa1262590 | 0.918839 | 9.487049e-87 | -8.615850e-47 |
| Msa1217210 | Msa1262590 | 0.831802 | 1.357651e-55 | -8.615850e-47 |
| Msa1218820 | Msa1262590 | 0.825920 | 3.603579e-54 | -8.615850e-47 |
| Msa1223390 | Msa1262590 | 0.824157 | 9.395114e-54 | -8.615850e-47 |
| Msa0495300 | Msa1262590 | 0.846940 | 1.583589e-59 | -8.615850e-47 |
| Msa0500570 | Msa1262590 | 0.805070 | 1.594466e-49 | -8.615850e-47 |
| Msa0500650 | Msa1262590 | 0.804313 | 2.294147e-49 | -8.615850e-47 |
| Msa0514020 | Msa1262590 | 0.804306 | 2.301438e-49 | -8.615850e-47 |
| Msa0514580 | Msa1262590 | 0.834085 | 3.673956e-56 | -8.615850e-47 |
| Msa0515800 | Msa1262590 | 0.811933 | 5.462581e-51 | -8.615850e-47 |
| Msa0517250 | Msa1262590 | 0.818621 | 1.781398e-52 | -8.615850e-47 |
| Msa0520260 | Msa1262590 | 0.827075 | 1.911293e-54 | -8.615850e-47 |
| Msa0520870 | Msa1262590 | 0.842875 | 1.979766e-58 | -8.615850e-47 |
| Msa0529030 | Msa1262590 | 0.814869 | 1.236829e-51 | -8.615850e-47 |
| Msa0531960 | Msa1262590 | 0.807925 | 3.983009e-50 | -8.615850e-47 |
| Msa0550590 | Msa1262590 | 0.816329 | 5.850589e-52 | -8.615850e-47 |
| Msa0553750 | Msa1262590 | 0.830270 | 3.228214e-55 | -8.615850e-47 |
| Msa0567170 | Msa1262590 | 0.817750 | 2.804857e-52 | -8.615850e-47 |
| Msa0571620 | Msa1262590 | 0.802738 | 4.864957e-49 | -8.615850e-47 |
| Msa0590200 | Msa1262590 | 0.817726 | 2.839321e-52 | -8.615850e-47 |
| Msa0591170 | Msa1262590 | 0.824711 | 6.959441e-54 | -8.615850e-47 |
| Msa0851300 | Msa1262590 | 0.831932 | 1.261051e-55 | -8.615850e-47 |
| Msa0851850 | Msa1262590 | 0.804749 | 1.860122e-49 | -8.615850e-47 |
| Msa0865420 | Msa1262590 | 0.815198 | 1.045309e-51 | -8.615850e-47 |
| Msa0878280 | Msa1262590 | 0.821042 | 4.981676e-53 | -8.615850e-47 |
| Msa0909260 | Msa1262590 | 0.800995 | 1.109358e-48 | -8.615850e-47 |
| Msa0909760 | Msa1262590 | 0.817925 | 2.560460e-52 | -8.615850e-47 |
| Msa0944010 | Msa1262590 | 0.836282 | 1.025032e-56 | -8.615850e-47 |
| Msa0956350 | Msa1262590 | 0.802801 | 4.721382e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1262590 | MtrunA17_Chr2g0286471 | 76.259 | 139 | 32 | 1 | 1 | 138 | 1 | 139 | 5.15e-68 | 202 |
| Msa1262590 | MtrunA17_Chr2g0286481 | 78.862 | 123 | 26 | 0 | 16 | 138 | 17 | 139 | 5.54e-65 | 194 |
| Msa1262590 | MtrunA17_Chr8g0385881 | 48.252 | 143 | 63 | 5 | 1 | 137 | 1 | 138 | 8.09e-34 | 115 |
| Msa1262590 | MtrunA17_Chr1g0191251 | 65.385 | 78 | 22 | 2 | 57 | 132 | 12 | 86 | 1.91e-24 | 90.1 |
| Msa1262590 | MtrunA17_Chr4g0066661 | 85.106 | 47 | 7 | 0 | 93 | 139 | 25 | 71 | 4.54e-20 | 79.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1262590 | AT4G25050.1 | 53.957 | 139 | 58 | 1 | 1 | 139 | 1 | 133 | 2.41e-40 | 132 |
| Msa1262590 | AT4G25050.2 | 49.669 | 151 | 58 | 2 | 1 | 139 | 1 | 145 | 8.29e-37 | 123 |
| Msa1262590 | AT1G54630.1 | 53.237 | 139 | 60 | 3 | 1 | 138 | 1 | 135 | 1.23e-36 | 122 |
| Msa1262590 | AT1G54580.1 | 54.783 | 115 | 44 | 1 | 24 | 138 | 29 | 135 | 2.63e-35 | 119 |
| Msa1262590 | AT5G27200.1 | 50.000 | 138 | 54 | 4 | 3 | 139 | 16 | 139 | 1.10e-34 | 117 |
| Msa1262590 | AT3G05020.1 | 48.889 | 135 | 66 | 2 | 6 | 137 | 2 | 136 | 1.01e-33 | 115 |
| Msa1262590 | AT1G54630.2 | 48.485 | 99 | 46 | 3 | 1 | 98 | 1 | 95 | 5.24e-17 | 71.6 |
Find 58 sgRNAs with CRISPR-Local
Find 253 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTGAAAGGGAAACTGATTT+TGG | 0.126186 | 8_2:-65381345 | None:intergenic |
| ATCAGTTTCCCTTTCAATTA+AGG | 0.135610 | 8_2:+65381350 | Msa1262590:CDS |
| AGCTCCAAGTGCAGAAAATT+TGG | 0.215999 | 8_2:-65382190 | None:intergenic |
| CAATCATGTCTGCTGCTTCT+TGG | 0.254760 | 8_2:-65382951 | None:intergenic |
| ATGGGACTTGAGGAGGAATT+TGG | 0.301410 | 8_2:+65382886 | Msa1262590:CDS |
| TAGCGAAAAGCTTGTTTGTT+AGG | 0.311442 | 8_2:-65381039 | None:intergenic |
| ATGCATGTGTGTCCTTGTTC+CGG | 0.332953 | 8_2:-65383011 | None:intergenic |
| TCTTCAAGGCCTTTGAGGCT+TGG | 0.362741 | 8_2:+65383260 | Msa1262590:three_prime_UTR |
| TCAGTTTCCCTTTCAATTAA+GGG | 0.363477 | 8_2:+65381351 | Msa1262590:CDS |
| CATCCATTACATTGCAGTCT+AGG | 0.375528 | 8_2:+65381385 | Msa1262590:CDS |
| TGCATGTGTGTCCTTGTTCC+GGG | 0.389703 | 8_2:-65383010 | None:intergenic |
| ATTCTTCTTCAAGGCCTTTG+AGG | 0.414464 | 8_2:+65383255 | Msa1262590:three_prime_UTR |
| CTCAGCATTCAAACAATCTC+TGG | 0.432166 | 8_2:+65381218 | Msa1262590:CDS |
| GTTTGTTAGGTGTGTATAGT+TGG | 0.443283 | 8_2:-65381026 | None:intergenic |
| GGCATTCCCCTTAATTGAAA+GGG | 0.445874 | 8_2:-65381358 | None:intergenic |
| CTTGGACGGTGGTAATGGAC+TGG | 0.447324 | 8_2:-65382933 | None:intergenic |
| TGCTTCTTGGACGGTGGTAA+TGG | 0.455810 | 8_2:-65382938 | None:intergenic |
| CCAGACGAGTCCTCTGTCAC+TGG | 0.476490 | 8_2:+65382162 | Msa1262590:CDS |
| TCAAAGGCCTTGAAGAAGAA+TGG | 0.482947 | 8_2:-65383253 | None:intergenic |
| ATCCATTACATTGCAGTCTA+GGG | 0.489304 | 8_2:+65381386 | Msa1262590:CDS |
| TACCCTAGACTGCAATGTAA+TGG | 0.496902 | 8_2:-65381388 | None:intergenic |
| CTGTAGGTTGAGATTGTGAT+GGG | 0.514505 | 8_2:+65382868 | Msa1262590:intron |
| AGGCATTCCCCTTAATTGAA+AGG | 0.514759 | 8_2:-65381359 | None:intergenic |
| CATGTCTGCTGCTTCTTGGA+CGG | 0.518674 | 8_2:-65382947 | None:intergenic |
| CAGTTTCCCTTTCAATTAAG+GGG | 0.519673 | 8_2:+65381352 | Msa1262590:CDS |
| TACACAATGGCATCCATCAC+AGG | 0.524640 | 8_2:+65381180 | Msa1262590:exon |
| GAATGCTGAGACGGAGAATG+AGG | 0.525070 | 8_2:-65381205 | None:intergenic |
| CTGCAATGTAATGGATGGAA+AGG | 0.533896 | 8_2:-65381379 | None:intergenic |
| GAAAGCAGAAACTGTAAAGA+AGG | 0.538034 | 8_2:+65382107 | Msa1262590:CDS |
| CTAGACTGCAATGTAATGGA+TGG | 0.538900 | 8_2:-65381384 | None:intergenic |
| CCAGTGACAGAGGACTCGTC+TGG | 0.547733 | 8_2:-65382162 | None:intergenic |
| GAATGAGTAATAACAAGTGT+GGG | 0.563297 | 8_2:-65381067 | None:intergenic |
| AGATTGTTTGAATGCTGAGA+CGG | 0.570818 | 8_2:-65381214 | None:intergenic |
| CCTGTAGGTTGAGATTGTGA+TGG | 0.575547 | 8_2:+65382867 | Msa1262590:intron |
| GAGAGAGAGAAATGGACGGA+GGG | 0.587571 | 8_2:-65381113 | None:intergenic |
| TGGAGCTGACTCTCTCGATA+CGG | 0.589016 | 8_2:+65382206 | Msa1262590:CDS |
| GGAGAATGAGGTTCCTGTGA+TGG | 0.592118 | 8_2:-65381193 | None:intergenic |
| GTCTGCTGCTTCTTGGACGG+TGG | 0.592160 | 8_2:-65382944 | None:intergenic |
| TATGATGTCTATTACGCGGA+GGG | 0.592746 | 8_2:+65383284 | Msa1262590:three_prime_UTR |
| GGAATGAGTAATAACAAGTG+TGG | 0.595734 | 8_2:-65381068 | None:intergenic |
| TGAGATTGTGATGGGACTTG+AGG | 0.596018 | 8_2:+65382876 | Msa1262590:CDS |
| ACGAAGAGAATGTGTGCTGT+TGG | 0.597661 | 8_2:-65381089 | None:intergenic |
| GGGTTAGAGAATCTAGCACC+AGG | 0.601875 | 8_2:-65381324 | None:intergenic |
| TTGGACGGTGGTAATGGACT+GGG | 0.607190 | 8_2:-65382932 | None:intergenic |
| GATTGTGATGGGACTTGAGG+AGG | 0.609784 | 8_2:+65382879 | Msa1262590:CDS |
| TAGTAATGCAATAATTCTAG+AGG | 0.611124 | 8_2:-65383133 | None:intergenic |
| TTAAGTTCAAACCCGGAACA+AGG | 0.611469 | 8_2:+65382999 | Msa1262590:exon |
| ACATCATATCCAAGCCTCAA+AGG | 0.619608 | 8_2:-65383269 | None:intergenic |
| CGATCTTCGAAAGTAACGAA+GGG | 0.620036 | 8_2:+65380999 | Msa1262590:five_prime_UTR |
| ATTCACATCTAACAGGTACC+TGG | 0.634844 | 8_2:+65381306 | Msa1262590:intron |
| ACGATCTTCGAAAGTAACGA+AGG | 0.640576 | 8_2:+65380998 | Msa1262590:five_prime_UTR |
| TTTGGACTCTCCAGTGACAG+AGG | 0.640603 | 8_2:-65382172 | None:intergenic |
| AGAGAGAGAGAAATGGACGG+AGG | 0.645629 | 8_2:-65381114 | None:intergenic |
| ATCTCTATCTCTCTACACAA+TGG | 0.651261 | 8_2:+65381167 | Msa1262590:exon |
| ATATGATGTCTATTACGCGG+AGG | 0.673719 | 8_2:+65383283 | Msa1262590:three_prime_UTR |
| GCACATGTAACTTGAAAGCG+AGG | 0.680439 | 8_2:-65381411 | None:intergenic |
| AGAGTGCTTAAGTTCAAACC+CGG | 0.684631 | 8_2:+65382992 | Msa1262590:exon |
| TGGATATGATGTCTATTACG+CGG | 0.703548 | 8_2:+65383280 | Msa1262590:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAATAATTTTAGTTTATACA+TGG | - | chr8_2:65381623-65381642 | None:intergenic | 10.0% |
| !!! | TAATAATTTTAGTTTATACA+TGG | - | chr8_2:65381623-65381642 | None:intergenic | 10.0% |
| !! | TCCAAAAATAAAAGAAAATA+GGG | - | chr8_2:65381473-65381492 | None:intergenic | 15.0% |
| !! | ATCCAAAAATAAAAGAAAAT+AGG | - | chr8_2:65381474-65381493 | None:intergenic | 15.0% |
| !! | AATATTACGTACATATTATA+AGG | + | chr8_2:65381647-65381666 | Msa1262590:intron | 15.0% |
| !! | ATATTAATAGTAAAAATCCA+AGG | - | chr8_2:65382082-65382101 | None:intergenic | 15.0% |
| !!! | ATTTTAAATATGAAACAAAC+AGG | - | chr8_2:65382479-65382498 | None:intergenic | 15.0% |
| !!! | ATTATGTTTTTTAATCTACA+TGG | + | chr8_2:65382668-65382687 | Msa1262590:intron | 15.0% |
| !! | TCCAAAAATAAAAGAAAATA+GGG | - | chr8_2:65381473-65381492 | None:intergenic | 15.0% |
| !! | ATCCAAAAATAAAAGAAAAT+AGG | - | chr8_2:65381474-65381493 | None:intergenic | 15.0% |
| !! | AATATTACGTACATATTATA+AGG | + | chr8_2:65381647-65381666 | Msa1262590:intron | 15.0% |
| !! | ATATTAATAGTAAAAATCCA+AGG | - | chr8_2:65382082-65382101 | None:intergenic | 15.0% |
| !!! | ATTTTAAATATGAAACAAAC+AGG | - | chr8_2:65382479-65382498 | None:intergenic | 15.0% |
| !!! | ATTATGTTTTTTAATCTACA+TGG | + | chr8_2:65382668-65382687 | Msa1262590:intron | 15.0% |
| !! | ACAAACAATTCTATTCATTA+TGG | + | chr8_2:65381243-65381262 | Msa1262590:intron | 20.0% |
| !!! | ATTCATTATGGTTTAATTTG+TGG | + | chr8_2:65381255-65381274 | Msa1262590:intron | 20.0% |
| !!! | TCCCTATTTTCTTTTATTTT+TGG | + | chr8_2:65381469-65381488 | Msa1262590:intron | 20.0% |
| !! | TCATGGATCAAATTAAAAAT+TGG | - | chr8_2:65381544-65381563 | None:intergenic | 20.0% |
| !! | TGGAATAAAATAAAACATCA+TGG | - | chr8_2:65381561-65381580 | None:intergenic | 20.0% |
| !!! | AAATTTGTTCACATTGAAAT+TGG | - | chr8_2:65381674-65381693 | None:intergenic | 20.0% |
| !! | AGTTGTATATTTGAATTGTT+TGG | + | chr8_2:65381735-65381754 | Msa1262590:intron | 20.0% |
| !! | GTTGTATATTTGAATTGTTT+GGG | + | chr8_2:65381736-65381755 | Msa1262590:intron | 20.0% |
| !! | TTGAACAATATATTTGATGT+TGG | + | chr8_2:65381967-65381986 | Msa1262590:intron | 20.0% |
| !!! | GGATTTTTACTATTAATATC+AGG | + | chr8_2:65382083-65382102 | Msa1262590:intron | 20.0% |
| !! | AAAAAGATGTTATTCAGAAT+TGG | - | chr8_2:65382539-65382558 | None:intergenic | 20.0% |
| !! | ATGATATTCTAAATAGAGAA+GGG | - | chr8_2:65382642-65382661 | None:intergenic | 20.0% |
| !! | AATGATATTCTAAATAGAGA+AGG | - | chr8_2:65382643-65382662 | None:intergenic | 20.0% |
| !!! | AGTTTTTATATTTTTGTGTG+AGG | + | chr8_2:65383039-65383058 | Msa1262590:three_prime_UTR | 20.0% |
| !!! | GTTTTTATATTTTTGTGTGA+GGG | + | chr8_2:65383040-65383059 | Msa1262590:three_prime_UTR | 20.0% |
| !!! | TTTTTATATTTTTGTGTGAG+GGG | + | chr8_2:65383041-65383060 | Msa1262590:three_prime_UTR | 20.0% |
| !!! | GGGTTTTTTAATTTTATCTT+AGG | + | chr8_2:65383061-65383080 | Msa1262590:three_prime_UTR | 20.0% |
| !!! | TTTTATTTATGTAGAACTTG+TGG | + | chr8_2:65383157-65383176 | Msa1262590:three_prime_UTR | 20.0% |
| !! | ACAAACAATTCTATTCATTA+TGG | + | chr8_2:65381243-65381262 | Msa1262590:intron | 20.0% |
| !!! | ATTCATTATGGTTTAATTTG+TGG | + | chr8_2:65381255-65381274 | Msa1262590:intron | 20.0% |
| !!! | TCCCTATTTTCTTTTATTTT+TGG | + | chr8_2:65381469-65381488 | Msa1262590:intron | 20.0% |
| !! | TCATGGATCAAATTAAAAAT+TGG | - | chr8_2:65381544-65381563 | None:intergenic | 20.0% |
| !! | TGGAATAAAATAAAACATCA+TGG | - | chr8_2:65381561-65381580 | None:intergenic | 20.0% |
| !!! | AAATTTGTTCACATTGAAAT+TGG | - | chr8_2:65381674-65381693 | None:intergenic | 20.0% |
| !! | AGTTGTATATTTGAATTGTT+TGG | + | chr8_2:65381735-65381754 | Msa1262590:intron | 20.0% |
| !! | GTTGTATATTTGAATTGTTT+GGG | + | chr8_2:65381736-65381755 | Msa1262590:intron | 20.0% |
| !! | TTGAACAATATATTTGATGT+TGG | + | chr8_2:65381967-65381986 | Msa1262590:intron | 20.0% |
| !!! | GGATTTTTACTATTAATATC+AGG | + | chr8_2:65382083-65382102 | Msa1262590:intron | 20.0% |
| !! | AAAAAGATGTTATTCAGAAT+TGG | - | chr8_2:65382539-65382558 | None:intergenic | 20.0% |
| !! | ATGATATTCTAAATAGAGAA+GGG | - | chr8_2:65382642-65382661 | None:intergenic | 20.0% |
| !! | AATGATATTCTAAATAGAGA+AGG | - | chr8_2:65382643-65382662 | None:intergenic | 20.0% |
| !!! | AGTTTTTATATTTTTGTGTG+AGG | + | chr8_2:65383039-65383058 | Msa1262590:three_prime_UTR | 20.0% |
| !!! | GTTTTTATATTTTTGTGTGA+GGG | + | chr8_2:65383040-65383059 | Msa1262590:three_prime_UTR | 20.0% |
| !!! | TTTTTATATTTTTGTGTGAG+GGG | + | chr8_2:65383041-65383060 | Msa1262590:three_prime_UTR | 20.0% |
| !!! | GGGTTTTTTAATTTTATCTT+AGG | + | chr8_2:65383061-65383080 | Msa1262590:three_prime_UTR | 20.0% |
| !!! | TTTTATTTATGTAGAACTTG+TGG | + | chr8_2:65383157-65383176 | Msa1262590:three_prime_UTR | 20.0% |
| !!! | ATTTTATTTTTGTCTCTCCA+GGG | + | chr8_2:65381597-65381616 | Msa1262590:intron | 25.0% |
| ! | ATTTGATGTTGGAATTATCA+AGG | + | chr8_2:65381978-65381997 | Msa1262590:intron | 25.0% |
| ! | TGACATTGTCAAAAAACAAT+TGG | + | chr8_2:65382134-65382153 | Msa1262590:CDS | 25.0% |
| ! | AATAACAACCTAATGAGAAA+TGG | - | chr8_2:65382448-65382467 | None:intergenic | 25.0% |
| ! | TTAAAATCAGAAGACAGTTA+TGG | + | chr8_2:65382492-65382511 | Msa1262590:intron | 25.0% |
| !! | TCTGAATAACATCTTTTTCT+TGG | + | chr8_2:65382541-65382560 | Msa1262590:intron | 25.0% |
| ! | TAGTAATGCAATAATTCTAG+AGG | - | chr8_2:65383136-65383155 | None:intergenic | 25.0% |
| !! | AAGAAAAAGCTTTGTAATAG+AGG | - | chr8_2:65383233-65383252 | None:intergenic | 25.0% |
| !!! | ATTTTATTTTTGTCTCTCCA+GGG | + | chr8_2:65381597-65381616 | Msa1262590:intron | 25.0% |
| ! | ATTTGATGTTGGAATTATCA+AGG | + | chr8_2:65381978-65381997 | Msa1262590:intron | 25.0% |
| ! | TGACATTGTCAAAAAACAAT+TGG | + | chr8_2:65382134-65382153 | Msa1262590:CDS | 25.0% |
| ! | AATAACAACCTAATGAGAAA+TGG | - | chr8_2:65382448-65382467 | None:intergenic | 25.0% |
| ! | TTAAAATCAGAAGACAGTTA+TGG | + | chr8_2:65382492-65382511 | Msa1262590:intron | 25.0% |
| !! | TCTGAATAACATCTTTTTCT+TGG | + | chr8_2:65382541-65382560 | Msa1262590:intron | 25.0% |
| ! | TAGTAATGCAATAATTCTAG+AGG | - | chr8_2:65383136-65383155 | None:intergenic | 25.0% |
| !! | AAGAAAAAGCTTTGTAATAG+AGG | - | chr8_2:65383233-65383252 | None:intergenic | 25.0% |
| GAATGAGTAATAACAAGTGT+GGG | - | chr8_2:65381070-65381089 | None:intergenic | 30.0% | |
| TATGCTAATTCACATCTAAC+AGG | + | chr8_2:65381299-65381318 | Msa1262590:intron | 30.0% | |
| !! | TTGAAAGGGAAACTGATTTT+GGG | - | chr8_2:65381347-65381366 | None:intergenic | 30.0% |
| !! | ATTGAAAGGGAAACTGATTT+TGG | - | chr8_2:65381348-65381367 | None:intergenic | 30.0% |
| ATCAGTTTCCCTTTCAATTA+AGG | + | chr8_2:65381350-65381369 | Msa1262590:CDS | 30.0% | |
| TCAGTTTCCCTTTCAATTAA+GGG | + | chr8_2:65381351-65381370 | Msa1262590:CDS | 30.0% | |
| !!! | CATTTTATTTTTGTCTCTCC+AGG | + | chr8_2:65381596-65381615 | Msa1262590:intron | 30.0% |
| !!! | TAATGCTATCTTGCTGTTTT+TGG | + | chr8_2:65382388-65382407 | Msa1262590:intron | 30.0% |
| CTCAAAAACCATTTCTCATT+AGG | + | chr8_2:65382437-65382456 | Msa1262590:intron | 30.0% | |
| CTAGAAAAGATACATAACAG+AGG | - | chr8_2:65382818-65382837 | None:intergenic | 30.0% | |
| ! | TTTTCTTCCATTCTTCTTCA+AGG | + | chr8_2:65383246-65383265 | Msa1262590:three_prime_UTR | 30.0% |
| GAATGAGTAATAACAAGTGT+GGG | - | chr8_2:65381070-65381089 | None:intergenic | 30.0% | |
| TATGCTAATTCACATCTAAC+AGG | + | chr8_2:65381299-65381318 | Msa1262590:intron | 30.0% | |
| !! | TTGAAAGGGAAACTGATTTT+GGG | - | chr8_2:65381347-65381366 | None:intergenic | 30.0% |
| !! | ATTGAAAGGGAAACTGATTT+TGG | - | chr8_2:65381348-65381367 | None:intergenic | 30.0% |
| ATCAGTTTCCCTTTCAATTA+AGG | + | chr8_2:65381350-65381369 | Msa1262590:CDS | 30.0% | |
| TCAGTTTCCCTTTCAATTAA+GGG | + | chr8_2:65381351-65381370 | Msa1262590:CDS | 30.0% | |
| !!! | CATTTTATTTTTGTCTCTCC+AGG | + | chr8_2:65381596-65381615 | Msa1262590:intron | 30.0% |
| !!! | TAATGCTATCTTGCTGTTTT+TGG | + | chr8_2:65382388-65382407 | Msa1262590:intron | 30.0% |
| CTCAAAAACCATTTCTCATT+AGG | + | chr8_2:65382437-65382456 | Msa1262590:intron | 30.0% | |
| CTAGAAAAGATACATAACAG+AGG | - | chr8_2:65382818-65382837 | None:intergenic | 30.0% | |
| ! | TTTTCTTCCATTCTTCTTCA+AGG | + | chr8_2:65383246-65383265 | Msa1262590:three_prime_UTR | 30.0% |
| ! | GTTTGTTAGGTGTGTATAGT+TGG | - | chr8_2:65381029-65381048 | None:intergenic | 35.0% |
| ! | TAGCGAAAAGCTTGTTTGTT+AGG | - | chr8_2:65381042-65381061 | None:intergenic | 35.0% |
| GGAATGAGTAATAACAAGTG+TGG | - | chr8_2:65381071-65381090 | None:intergenic | 35.0% | |
| ATCTCTATCTCTCTACACAA+TGG | + | chr8_2:65381167-65381186 | Msa1262590:exon | 35.0% | |
| AGATTGTTTGAATGCTGAGA+CGG | - | chr8_2:65381217-65381236 | None:intergenic | 35.0% | |
| CAGTTTCCCTTTCAATTAAG+GGG | + | chr8_2:65381352-65381371 | Msa1262590:CDS | 35.0% | |
| ATCCATTACATTGCAGTCTA+GGG | + | chr8_2:65381386-65381405 | Msa1262590:CDS | 35.0% | |
| !! | AAGAGTTAAGAGGGTTTTAG+AGG | - | chr8_2:65381445-65381464 | None:intergenic | 35.0% |
| AGGGAGTAAAAGAGTTAAGA+GGG | - | chr8_2:65381454-65381473 | None:intergenic | 35.0% | |
| TAGGGAGTAAAAGAGTTAAG+AGG | - | chr8_2:65381455-65381474 | None:intergenic | 35.0% | |
| AAATGTTCTGCAGACATACA+TGG | - | chr8_2:65381581-65381600 | None:intergenic | 35.0% | |
| !!! | TTTTAGTTTATACATGGCCC+TGG | - | chr8_2:65381617-65381636 | None:intergenic | 35.0% |
| AAATGTTGCTAGTTCAGAAG+AGG | + | chr8_2:65381838-65381857 | Msa1262590:intron | 35.0% | |
| CACACAGAATCAAATATCAG+AGG | - | chr8_2:65382014-65382033 | None:intergenic | 35.0% | |
| CTCTGATATTTGATTCTGTG+TGG | + | chr8_2:65382012-65382031 | Msa1262590:intron | 35.0% | |
| GAAAGCAGAAACTGTAAAGA+AGG | + | chr8_2:65382107-65382126 | Msa1262590:CDS | 35.0% | |
| TATTGCCTTATCTAAGTGTG+TGG | + | chr8_2:65382337-65382356 | Msa1262590:intron | 35.0% | |
| TCATGTACTTCTTGCTTTCT+GGG | + | chr8_2:65382360-65382379 | Msa1262590:intron | 35.0% | |
| TGTCCTTTAGTATATTGCTG+TGG | + | chr8_2:65382572-65382591 | Msa1262590:intron | 35.0% | |
| TTGCCACAGCAATATACTAA+AGG | - | chr8_2:65382578-65382597 | None:intergenic | 35.0% | |
| AGACTTGTCAAATTTCCTGT+AGG | + | chr8_2:65382852-65382871 | Msa1262590:intron | 35.0% | |
| TGGATATGATGTCTATTACG+CGG | + | chr8_2:65383280-65383299 | Msa1262590:three_prime_UTR | 35.0% | |
| ! | GTTTGTTAGGTGTGTATAGT+TGG | - | chr8_2:65381029-65381048 | None:intergenic | 35.0% |
| ! | TAGCGAAAAGCTTGTTTGTT+AGG | - | chr8_2:65381042-65381061 | None:intergenic | 35.0% |
| GGAATGAGTAATAACAAGTG+TGG | - | chr8_2:65381071-65381090 | None:intergenic | 35.0% | |
| ATCTCTATCTCTCTACACAA+TGG | + | chr8_2:65381167-65381186 | Msa1262590:exon | 35.0% | |
| AGATTGTTTGAATGCTGAGA+CGG | - | chr8_2:65381217-65381236 | None:intergenic | 35.0% | |
| CAGTTTCCCTTTCAATTAAG+GGG | + | chr8_2:65381352-65381371 | Msa1262590:CDS | 35.0% | |
| ATCCATTACATTGCAGTCTA+GGG | + | chr8_2:65381386-65381405 | Msa1262590:CDS | 35.0% | |
| !! | AAGAGTTAAGAGGGTTTTAG+AGG | - | chr8_2:65381445-65381464 | None:intergenic | 35.0% |
| AGGGAGTAAAAGAGTTAAGA+GGG | - | chr8_2:65381454-65381473 | None:intergenic | 35.0% | |
| TAGGGAGTAAAAGAGTTAAG+AGG | - | chr8_2:65381455-65381474 | None:intergenic | 35.0% | |
| AAATGTTCTGCAGACATACA+TGG | - | chr8_2:65381581-65381600 | None:intergenic | 35.0% | |
| !!! | TTTTAGTTTATACATGGCCC+TGG | - | chr8_2:65381617-65381636 | None:intergenic | 35.0% |
| AAATGTTGCTAGTTCAGAAG+AGG | + | chr8_2:65381838-65381857 | Msa1262590:intron | 35.0% | |
| CACACAGAATCAAATATCAG+AGG | - | chr8_2:65382014-65382033 | None:intergenic | 35.0% | |
| CTCTGATATTTGATTCTGTG+TGG | + | chr8_2:65382012-65382031 | Msa1262590:intron | 35.0% | |
| GAAAGCAGAAACTGTAAAGA+AGG | + | chr8_2:65382107-65382126 | Msa1262590:CDS | 35.0% | |
| TATTGCCTTATCTAAGTGTG+TGG | + | chr8_2:65382337-65382356 | Msa1262590:intron | 35.0% | |
| TCATGTACTTCTTGCTTTCT+GGG | + | chr8_2:65382360-65382379 | Msa1262590:intron | 35.0% | |
| TGTCCTTTAGTATATTGCTG+TGG | + | chr8_2:65382572-65382591 | Msa1262590:intron | 35.0% | |
| TTGCCACAGCAATATACTAA+AGG | - | chr8_2:65382578-65382597 | None:intergenic | 35.0% | |
| AGACTTGTCAAATTTCCTGT+AGG | + | chr8_2:65382852-65382871 | Msa1262590:intron | 35.0% | |
| TGGATATGATGTCTATTACG+CGG | + | chr8_2:65383280-65383299 | Msa1262590:three_prime_UTR | 35.0% | |
| ACGATCTTCGAAAGTAACGA+AGG | + | chr8_2:65380998-65381017 | Msa1262590:five_prime_UTR | 40.0% | |
| CGATCTTCGAAAGTAACGAA+GGG | + | chr8_2:65380999-65381018 | Msa1262590:five_prime_UTR | 40.0% | |
| CTCAGCATTCAAACAATCTC+TGG | + | chr8_2:65381218-65381237 | Msa1262590:CDS | 40.0% | |
| ATTCACATCTAACAGGTACC+TGG | + | chr8_2:65381306-65381325 | Msa1262590:intron | 40.0% | |
| GGCATTCCCCTTAATTGAAA+GGG | - | chr8_2:65381361-65381380 | None:intergenic | 40.0% | |
| AGGCATTCCCCTTAATTGAA+AGG | - | chr8_2:65381362-65381381 | None:intergenic | 40.0% | |
| !! | CTGCAATGTAATGGATGGAA+AGG | - | chr8_2:65381382-65381401 | None:intergenic | 40.0% |
| ! | CTAGACTGCAATGTAATGGA+TGG | - | chr8_2:65381387-65381406 | None:intergenic | 40.0% |
| CATCCATTACATTGCAGTCT+AGG | + | chr8_2:65381385-65381404 | Msa1262590:CDS | 40.0% | |
| TACCCTAGACTGCAATGTAA+TGG | - | chr8_2:65381391-65381410 | None:intergenic | 40.0% | |
| !! | AGAGGAGAATGGATTTGTTG+TGG | + | chr8_2:65381856-65381875 | Msa1262590:intron | 40.0% |
| CTGTTGTGATATAAACGCCT+TGG | + | chr8_2:65382062-65382081 | Msa1262590:intron | 40.0% | |
| ! | GAGTCCAAATTTTCTGCACT+TGG | + | chr8_2:65382186-65382205 | Msa1262590:CDS | 40.0% |
| AGCTCCAAGTGCAGAAAATT+TGG | - | chr8_2:65382193-65382212 | None:intergenic | 40.0% | |
| CATGACCACACACTTAGATA+AGG | - | chr8_2:65382345-65382364 | None:intergenic | 40.0% | |
| GTCATGTACTTCTTGCTTTC+TGG | + | chr8_2:65382359-65382378 | Msa1262590:intron | 40.0% | |
| CAGGGTGATAAAAGCAAGAA+GGG | - | chr8_2:65382722-65382741 | None:intergenic | 40.0% | |
| TCATGCTGAAGTTTCCACTT+AGG | - | chr8_2:65382766-65382785 | None:intergenic | 40.0% | |
| ! | CTGTAGGTTGAGATTGTGAT+GGG | + | chr8_2:65382868-65382887 | Msa1262590:intron | 40.0% |
| ! | AGAGTGCTTAAGTTCAAACC+CGG | + | chr8_2:65382992-65383011 | Msa1262590:exon | 40.0% |
| TTAAGTTCAAACCCGGAACA+AGG | + | chr8_2:65382999-65383018 | Msa1262590:exon | 40.0% | |
| TCAAAGGCCTTGAAGAAGAA+TGG | - | chr8_2:65383256-65383275 | None:intergenic | 40.0% | |
| ATTCTTCTTCAAGGCCTTTG+AGG | + | chr8_2:65383255-65383274 | Msa1262590:three_prime_UTR | 40.0% | |
| ACATCATATCCAAGCCTCAA+AGG | - | chr8_2:65383272-65383291 | None:intergenic | 40.0% | |
| ATATGATGTCTATTACGCGG+AGG | + | chr8_2:65383283-65383302 | Msa1262590:three_prime_UTR | 40.0% | |
| TATGATGTCTATTACGCGGA+GGG | + | chr8_2:65383284-65383303 | Msa1262590:three_prime_UTR | 40.0% | |
| ACGATCTTCGAAAGTAACGA+AGG | + | chr8_2:65380998-65381017 | Msa1262590:five_prime_UTR | 40.0% | |
| CGATCTTCGAAAGTAACGAA+GGG | + | chr8_2:65380999-65381018 | Msa1262590:five_prime_UTR | 40.0% | |
| CTCAGCATTCAAACAATCTC+TGG | + | chr8_2:65381218-65381237 | Msa1262590:CDS | 40.0% | |
| ATTCACATCTAACAGGTACC+TGG | + | chr8_2:65381306-65381325 | Msa1262590:intron | 40.0% | |
| GGCATTCCCCTTAATTGAAA+GGG | - | chr8_2:65381361-65381380 | None:intergenic | 40.0% | |
| AGGCATTCCCCTTAATTGAA+AGG | - | chr8_2:65381362-65381381 | None:intergenic | 40.0% | |
| !! | CTGCAATGTAATGGATGGAA+AGG | - | chr8_2:65381382-65381401 | None:intergenic | 40.0% |
| ! | CTAGACTGCAATGTAATGGA+TGG | - | chr8_2:65381387-65381406 | None:intergenic | 40.0% |
| CATCCATTACATTGCAGTCT+AGG | + | chr8_2:65381385-65381404 | Msa1262590:CDS | 40.0% | |
| TACCCTAGACTGCAATGTAA+TGG | - | chr8_2:65381391-65381410 | None:intergenic | 40.0% | |
| !! | AGAGGAGAATGGATTTGTTG+TGG | + | chr8_2:65381856-65381875 | Msa1262590:intron | 40.0% |
| CTGTTGTGATATAAACGCCT+TGG | + | chr8_2:65382062-65382081 | Msa1262590:intron | 40.0% | |
| ! | GAGTCCAAATTTTCTGCACT+TGG | + | chr8_2:65382186-65382205 | Msa1262590:CDS | 40.0% |
| AGCTCCAAGTGCAGAAAATT+TGG | - | chr8_2:65382193-65382212 | None:intergenic | 40.0% | |
| CATGACCACACACTTAGATA+AGG | - | chr8_2:65382345-65382364 | None:intergenic | 40.0% | |
| GTCATGTACTTCTTGCTTTC+TGG | + | chr8_2:65382359-65382378 | Msa1262590:intron | 40.0% | |
| CAGGGTGATAAAAGCAAGAA+GGG | - | chr8_2:65382722-65382741 | None:intergenic | 40.0% | |
| TCATGCTGAAGTTTCCACTT+AGG | - | chr8_2:65382766-65382785 | None:intergenic | 40.0% | |
| ! | CTGTAGGTTGAGATTGTGAT+GGG | + | chr8_2:65382868-65382887 | Msa1262590:intron | 40.0% |
| ! | AGAGTGCTTAAGTTCAAACC+CGG | + | chr8_2:65382992-65383011 | Msa1262590:exon | 40.0% |
| TTAAGTTCAAACCCGGAACA+AGG | + | chr8_2:65382999-65383018 | Msa1262590:exon | 40.0% | |
| TCAAAGGCCTTGAAGAAGAA+TGG | - | chr8_2:65383256-65383275 | None:intergenic | 40.0% | |
| ATTCTTCTTCAAGGCCTTTG+AGG | + | chr8_2:65383255-65383274 | Msa1262590:three_prime_UTR | 40.0% | |
| ACATCATATCCAAGCCTCAA+AGG | - | chr8_2:65383272-65383291 | None:intergenic | 40.0% | |
| ATATGATGTCTATTACGCGG+AGG | + | chr8_2:65383283-65383302 | Msa1262590:three_prime_UTR | 40.0% | |
| ACGAAGAGAATGTGTGCTGT+TGG | - | chr8_2:65381092-65381111 | None:intergenic | 45.0% | |
| GAGAGAGAGAGAGAAATGGA+CGG | - | chr8_2:65381120-65381139 | None:intergenic | 45.0% | |
| GAGAGAGAGAGAGAGAGAAA+TGG | - | chr8_2:65381124-65381143 | None:intergenic | 45.0% | |
| TACACAATGGCATCCATCAC+AGG | + | chr8_2:65381180-65381199 | Msa1262590:exon | 45.0% | |
| GCACATGTAACTTGAAAGCG+AGG | - | chr8_2:65381414-65381433 | None:intergenic | 45.0% | |
| GCTAGTTCAGAAGAGGAGAA+TGG | + | chr8_2:65381845-65381864 | Msa1262590:intron | 45.0% | |
| GCAGGGTGATAAAAGCAAGA+AGG | - | chr8_2:65382723-65382742 | None:intergenic | 45.0% | |
| CTTAAGTGGTTCATGAGGCA+GGG | - | chr8_2:65382740-65382759 | None:intergenic | 45.0% | |
| AACCACTTAAGCTGCCTAAG+TGG | + | chr8_2:65382749-65382768 | Msa1262590:intron | 45.0% | |
| TTCCACTTAGGCAGCTTAAG+TGG | - | chr8_2:65382754-65382773 | None:intergenic | 45.0% | |
| CCATCACAATCTCAACCTAC+AGG | - | chr8_2:65382870-65382889 | None:intergenic | 45.0% | |
| ! | CCTGTAGGTTGAGATTGTGA+TGG | + | chr8_2:65382867-65382886 | Msa1262590:intron | 45.0% |
| ! | TGAGATTGTGATGGGACTTG+AGG | + | chr8_2:65382876-65382895 | Msa1262590:CDS | 45.0% |
| ATGGGACTTGAGGAGGAATT+TGG | + | chr8_2:65382886-65382905 | Msa1262590:CDS | 45.0% | |
| ! | CAATCATGTCTGCTGCTTCT+TGG | - | chr8_2:65382954-65382973 | None:intergenic | 45.0% |
| ATGCATGTGTGTCCTTGTTC+CGG | - | chr8_2:65383014-65383033 | None:intergenic | 45.0% | |
| ACGAAGAGAATGTGTGCTGT+TGG | - | chr8_2:65381092-65381111 | None:intergenic | 45.0% | |
| GAGAGAGAGAGAGAAATGGA+CGG | - | chr8_2:65381120-65381139 | None:intergenic | 45.0% | |
| GAGAGAGAGAGAGAGAGAAA+TGG | - | chr8_2:65381124-65381143 | None:intergenic | 45.0% | |
| TACACAATGGCATCCATCAC+AGG | + | chr8_2:65381180-65381199 | Msa1262590:exon | 45.0% | |
| GCACATGTAACTTGAAAGCG+AGG | - | chr8_2:65381414-65381433 | None:intergenic | 45.0% | |
| GCTAGTTCAGAAGAGGAGAA+TGG | + | chr8_2:65381845-65381864 | Msa1262590:intron | 45.0% | |
| GCAGGGTGATAAAAGCAAGA+AGG | - | chr8_2:65382723-65382742 | None:intergenic | 45.0% | |
| CTTAAGTGGTTCATGAGGCA+GGG | - | chr8_2:65382740-65382759 | None:intergenic | 45.0% | |
| AACCACTTAAGCTGCCTAAG+TGG | + | chr8_2:65382749-65382768 | Msa1262590:intron | 45.0% | |
| TTCCACTTAGGCAGCTTAAG+TGG | - | chr8_2:65382754-65382773 | None:intergenic | 45.0% | |
| CCATCACAATCTCAACCTAC+AGG | - | chr8_2:65382870-65382889 | None:intergenic | 45.0% | |
| ! | CCTGTAGGTTGAGATTGTGA+TGG | + | chr8_2:65382867-65382886 | Msa1262590:intron | 45.0% |
| ! | TGAGATTGTGATGGGACTTG+AGG | + | chr8_2:65382876-65382895 | Msa1262590:CDS | 45.0% |
| ATGGGACTTGAGGAGGAATT+TGG | + | chr8_2:65382886-65382905 | Msa1262590:CDS | 45.0% | |
| ! | CAATCATGTCTGCTGCTTCT+TGG | - | chr8_2:65382954-65382973 | None:intergenic | 45.0% |
| ATGCATGTGTGTCCTTGTTC+CGG | - | chr8_2:65383014-65383033 | None:intergenic | 45.0% | |
| GAGAGAGAGAAATGGACGGA+GGG | - | chr8_2:65381116-65381135 | None:intergenic | 50.0% | |
| AGAGAGAGAGAAATGGACGG+AGG | - | chr8_2:65381117-65381136 | None:intergenic | 50.0% | |
| GGAGAATGAGGTTCCTGTGA+TGG | - | chr8_2:65381196-65381215 | None:intergenic | 50.0% | |
| GAATGCTGAGACGGAGAATG+AGG | - | chr8_2:65381208-65381227 | None:intergenic | 50.0% | |
| GGGTTAGAGAATCTAGCACC+AGG | - | chr8_2:65381327-65381346 | None:intergenic | 50.0% | |
| TTTGGACTCTCCAGTGACAG+AGG | - | chr8_2:65382175-65382194 | None:intergenic | 50.0% | |
| ! | TGGAGCTGACTCTCTCGATA+CGG | + | chr8_2:65382206-65382225 | Msa1262590:CDS | 50.0% |
| GCTTAAGTGGTTCATGAGGC+AGG | - | chr8_2:65382741-65382760 | None:intergenic | 50.0% | |
| GGCAGCTTAAGTGGTTCATG+AGG | - | chr8_2:65382745-65382764 | None:intergenic | 50.0% | |
| ! | GATTGTGATGGGACTTGAGG+AGG | + | chr8_2:65382879-65382898 | Msa1262590:CDS | 50.0% |
| !! | TTGGACGGTGGTAATGGACT+GGG | - | chr8_2:65382935-65382954 | None:intergenic | 50.0% |
| TGCTTCTTGGACGGTGGTAA+TGG | - | chr8_2:65382941-65382960 | None:intergenic | 50.0% | |
| ! | CATGTCTGCTGCTTCTTGGA+CGG | - | chr8_2:65382950-65382969 | None:intergenic | 50.0% |
| TGCATGTGTGTCCTTGTTCC+GGG | - | chr8_2:65383013-65383032 | None:intergenic | 50.0% | |
| !! | TCTTCAAGGCCTTTGAGGCT+TGG | + | chr8_2:65383260-65383279 | Msa1262590:three_prime_UTR | 50.0% |
| GAGAGAGAGAAATGGACGGA+GGG | - | chr8_2:65381116-65381135 | None:intergenic | 50.0% | |
| AGAGAGAGAGAAATGGACGG+AGG | - | chr8_2:65381117-65381136 | None:intergenic | 50.0% | |
| GGAGAATGAGGTTCCTGTGA+TGG | - | chr8_2:65381196-65381215 | None:intergenic | 50.0% | |
| GAATGCTGAGACGGAGAATG+AGG | - | chr8_2:65381208-65381227 | None:intergenic | 50.0% | |
| GGGTTAGAGAATCTAGCACC+AGG | - | chr8_2:65381327-65381346 | None:intergenic | 50.0% | |
| TTTGGACTCTCCAGTGACAG+AGG | - | chr8_2:65382175-65382194 | None:intergenic | 50.0% | |
| ! | TGGAGCTGACTCTCTCGATA+CGG | + | chr8_2:65382206-65382225 | Msa1262590:CDS | 50.0% |
| GCTTAAGTGGTTCATGAGGC+AGG | - | chr8_2:65382741-65382760 | None:intergenic | 50.0% | |
| GGCAGCTTAAGTGGTTCATG+AGG | - | chr8_2:65382745-65382764 | None:intergenic | 50.0% | |
| ! | GATTGTGATGGGACTTGAGG+AGG | + | chr8_2:65382879-65382898 | Msa1262590:CDS | 50.0% |
| !! | TTGGACGGTGGTAATGGACT+GGG | - | chr8_2:65382935-65382954 | None:intergenic | 50.0% |
| TGCTTCTTGGACGGTGGTAA+TGG | - | chr8_2:65382941-65382960 | None:intergenic | 50.0% | |
| ! | CATGTCTGCTGCTTCTTGGA+CGG | - | chr8_2:65382950-65382969 | None:intergenic | 50.0% |
| TGCATGTGTGTCCTTGTTCC+GGG | - | chr8_2:65383013-65383032 | None:intergenic | 50.0% | |
| !! | TCTTCAAGGCCTTTGAGGCT+TGG | + | chr8_2:65383260-65383279 | Msa1262590:three_prime_UTR | 50.0% |
| !! | CTTGGACGGTGGTAATGGAC+TGG | - | chr8_2:65382936-65382955 | None:intergenic | 55.0% |
| !! | CTTGGACGGTGGTAATGGAC+TGG | - | chr8_2:65382936-65382955 | None:intergenic | 55.0% |
| CCAGTGACAGAGGACTCGTC+TGG | - | chr8_2:65382165-65382184 | None:intergenic | 60.0% | |
| CCAGACGAGTCCTCTGTCAC+TGG | + | chr8_2:65382162-65382181 | Msa1262590:CDS | 60.0% | |
| ! | GTCTGCTGCTTCTTGGACGG+TGG | - | chr8_2:65382947-65382966 | None:intergenic | 60.0% |
| CCAGTGACAGAGGACTCGTC+TGG | - | chr8_2:65382165-65382184 | None:intergenic | 60.0% | |
| CCAGACGAGTCCTCTGTCAC+TGG | + | chr8_2:65382162-65382181 | Msa1262590:CDS | 60.0% | |
| ! | GTCTGCTGCTTCTTGGACGG+TGG | - | chr8_2:65382947-65382966 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 65380968 | 65383306 | 65380968 | ID=Msa1262590;Name=Msa1262590 |
| chr8_2 | mRNA | 65380968 | 65383306 | 65380968 | ID=Msa1262590-mRNA-1;Parent=Msa1262590;Name=Msa1262590-mRNA-1;_AED=0.03;_eAED=0.03;_QI=198|1|1|1|0.75|0.6|5|304|139 |
| chr8_2 | exon | 65380968 | 65381124 | 65380968 | ID=Msa1262590-mRNA-1:exon:21130;Parent=Msa1262590-mRNA-1 |
| chr8_2 | exon | 65381145 | 65381239 | 65381145 | ID=Msa1262590-mRNA-1:exon:21131;Parent=Msa1262590-mRNA-1 |
| chr8_2 | exon | 65381321 | 65381434 | 65381321 | ID=Msa1262590-mRNA-1:exon:21132;Parent=Msa1262590-mRNA-1 |
| chr8_2 | exon | 65382105 | 65382227 | 65382105 | ID=Msa1262590-mRNA-1:exon:21133;Parent=Msa1262590-mRNA-1 |
| chr8_2 | exon | 65382874 | 65383306 | 65382874 | ID=Msa1262590-mRNA-1:exon:21134;Parent=Msa1262590-mRNA-1 |
| chr8_2 | five_prime_UTR | 65380968 | 65381124 | 65380968 | ID=Msa1262590-mRNA-1:five_prime_utr;Parent=Msa1262590-mRNA-1 |
| chr8_2 | five_prime_UTR | 65381145 | 65381185 | 65381145 | ID=Msa1262590-mRNA-1:five_prime_utr;Parent=Msa1262590-mRNA-1 |
| chr8_2 | CDS | 65381186 | 65381239 | 65381186 | ID=Msa1262590-mRNA-1:cds;Parent=Msa1262590-mRNA-1 |
| chr8_2 | CDS | 65381321 | 65381434 | 65381321 | ID=Msa1262590-mRNA-1:cds;Parent=Msa1262590-mRNA-1 |
| chr8_2 | CDS | 65382105 | 65382227 | 65382105 | ID=Msa1262590-mRNA-1:cds;Parent=Msa1262590-mRNA-1 |
| chr8_2 | CDS | 65382874 | 65383002 | 65382874 | ID=Msa1262590-mRNA-1:cds;Parent=Msa1262590-mRNA-1 |
| chr8_2 | three_prime_UTR | 65383003 | 65383306 | 65383003 | ID=Msa1262590-mRNA-1:three_prime_utr;Parent=Msa1262590-mRNA-1 |
| Gene Sequence |
| Protein sequence |
