Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1283960 | XP_003628200.1 | 91.667 | 156 | 13 | 0 | 1 | 156 | 1 | 156 | 8.53e-101 | 296 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1283960 | sp|Q9SSK5|MLP43_ARATH | 36.913 | 149 | 91 | 3 | 3 | 149 | 7 | 154 | 8.49e-24 | 94.0 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1283960 | G7L7T5 | 91.667 | 156 | 13 | 0 | 1 | 156 | 1 | 156 | 4.07e-101 | 296 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0025160 | Msa1283960 | 0.815522 | 8.853006e-52 | -8.615850e-47 |
| Msa0033220 | Msa1283960 | 0.820532 | 6.526034e-53 | -8.615850e-47 |
| Msa0034700 | Msa1283960 | -0.803029 | 4.236861e-49 | -8.615850e-47 |
| Msa0077570 | Msa1283960 | -0.857312 | 1.778785e-62 | -8.615850e-47 |
| Msa0079880 | Msa1283960 | 0.826040 | 3.373070e-54 | -8.615850e-47 |
| Msa0080030 | Msa1283960 | 0.828718 | 7.691523e-55 | -8.615850e-47 |
| Msa0080820 | Msa1283960 | 0.827300 | 1.688631e-54 | -8.615850e-47 |
| Msa0604750 | Msa1283960 | 0.802070 | 6.680537e-49 | -8.615850e-47 |
| Msa0612520 | Msa1283960 | 0.800915 | 1.151989e-48 | -8.615850e-47 |
| Msa0619710 | Msa1283960 | 0.844064 | 9.527493e-59 | -8.615850e-47 |
| Msa0620900 | Msa1283960 | 0.844666 | 6.561956e-59 | -8.615850e-47 |
| Msa0657710 | Msa1283960 | 0.889207 | 2.978129e-73 | -8.615850e-47 |
| Msa0657720 | Msa1283960 | 0.858562 | 7.563718e-63 | -8.615850e-47 |
| Msa0660090 | Msa1283960 | 0.809068 | 2.271364e-50 | -8.615850e-47 |
| Msa0685610 | Msa1283960 | 0.800195 | 1.614974e-48 | -8.615850e-47 |
| Msa0702790 | Msa1283960 | 0.860331 | 2.225349e-63 | -8.615850e-47 |
| Msa0702800 | Msa1283960 | 0.883221 | 5.389375e-71 | -8.615850e-47 |
| Msa0706150 | Msa1283960 | 0.850950 | 1.219145e-60 | -8.615850e-47 |
| Msa0722890 | Msa1283960 | 0.812401 | 4.320093e-51 | -8.615850e-47 |
| Msa0723090 | Msa1283960 | 0.834224 | 3.390909e-56 | -8.615850e-47 |
| Msa0747000 | Msa1283960 | 0.801898 | 7.245108e-49 | -8.615850e-47 |
| Msa0821530 | Msa1283960 | 0.800559 | 1.361390e-48 | -8.615850e-47 |
| Msa0828950 | Msa1283960 | 0.854668 | 1.056154e-61 | -8.615850e-47 |
| Msa0828960 | Msa1283960 | 0.883943 | 2.924821e-71 | -8.615850e-47 |
| Msa0132700 | Msa1283960 | 0.804475 | 2.122645e-49 | -8.615850e-47 |
| Msa0165640 | Msa1283960 | 0.823371 | 1.435908e-53 | -8.615850e-47 |
| Msa0173380 | Msa1283960 | 0.809455 | 1.876382e-50 | -8.615850e-47 |
| Msa0176060 | Msa1283960 | 0.822796 | 1.955268e-53 | -8.615850e-47 |
| Msa0203080 | Msa1283960 | 0.822150 | 2.762458e-53 | -8.615850e-47 |
| Msa0206370 | Msa1283960 | 0.800757 | 1.240547e-48 | -8.615850e-47 |
| Msa0221180 | Msa1283960 | 0.806764 | 7.022052e-50 | -8.615850e-47 |
| Msa1228580 | Msa1283960 | 0.815604 | 8.488936e-52 | -8.615850e-47 |
| Msa1228630 | Msa1283960 | 0.809703 | 1.659728e-50 | -8.615850e-47 |
| Msa1242130 | Msa1283960 | 0.962079 | 1.882000e-120 | -8.615850e-47 |
| Msa1242160 | Msa1283960 | 0.918731 | 1.085152e-86 | -8.615850e-47 |
| Msa1246830 | Msa1283960 | 0.837283 | 5.696908e-57 | -8.615850e-47 |
| Msa1250610 | Msa1283960 | 0.970223 | 2.722550e-131 | -8.615850e-47 |
| Msa1250660 | Msa1283960 | 0.841894 | 3.602160e-58 | -8.615850e-47 |
| Msa1273320 | Msa1283960 | 0.811002 | 8.703390e-51 | -8.615850e-47 |
| Msa1283930 | Msa1283960 | 0.928347 | 3.281980e-92 | -8.615850e-47 |
| Msa1283960 | Msa1283980 | 0.815642 | 8.326978e-52 | -8.615850e-47 |
| Msa1283960 | Msa1284020 | 0.813367 | 2.653733e-51 | -8.615850e-47 |
| Msa1283960 | Msa1288070 | 0.817624 | 2.994324e-52 | -8.615850e-47 |
| Msa1283960 | Msa1322960 | 0.917649 | 4.103732e-86 | -8.615850e-47 |
| Msa1283960 | Msa1322980 | 0.827556 | 1.465824e-54 | -8.615850e-47 |
| Msa1283960 | Msa1326640 | 0.963405 | 4.800953e-122 | -8.615850e-47 |
| Msa1283960 | Msa1326680 | 0.970087 | 4.354108e-131 | -8.615850e-47 |
| Msa1283960 | Msa1326710 | 0.900861 | 4.795739e-78 | -8.615850e-47 |
| Msa1283960 | Msa1327800 | 0.827701 | 1.352492e-54 | -8.615850e-47 |
| Msa1283960 | Msa1331570 | -0.806407 | 8.351258e-50 | -8.615850e-47 |
| Msa1283960 | Msa1341750 | 0.834674 | 2.614429e-56 | -8.615850e-47 |
| Msa1283960 | Msa1348170 | -0.803987 | 2.681848e-49 | -8.615850e-47 |
| Msa1283960 | Msa1354360 | -0.811093 | 8.316422e-51 | -8.615850e-47 |
| Msa1283960 | Msa1354370 | -0.806195 | 9.254898e-50 | -8.615850e-47 |
| Msa1283960 | Msa1354400 | -0.810110 | 1.356477e-50 | -8.615850e-47 |
| Msa1283960 | Msa1354520 | -0.808434 | 3.103623e-50 | -8.615850e-47 |
| Msa1283960 | Msa1354530 | -0.811059 | 8.458867e-51 | -8.615850e-47 |
| Msa1283960 | Msa1354540 | -0.803043 | 4.208985e-49 | -8.615850e-47 |
| Msa1283960 | Msa1354650 | -0.807514 | 4.871473e-50 | -8.615850e-47 |
| Msa1283960 | Msa1354660 | -0.811368 | 7.249860e-51 | -8.615850e-47 |
| Msa1283960 | Msa1354780 | -0.806036 | 9.995404e-50 | -8.615850e-47 |
| Msa1283960 | Msa1354790 | -0.809034 | 2.310097e-50 | -8.615850e-47 |
| Msa1283960 | Msa1354800 | -0.801343 | 9.414553e-49 | -8.615850e-47 |
| Msa1283960 | Msa1354960 | -0.810253 | 1.263885e-50 | -8.615850e-47 |
| Msa1283960 | Msa1354970 | -0.800498 | 1.401429e-48 | -8.615850e-47 |
| Msa1283960 | Msa1357070 | 0.845779 | 3.281361e-59 | -8.615850e-47 |
| Msa1283960 | Msa1365990 | -0.804613 | 1.985906e-49 | -8.615850e-47 |
| Msa1283960 | Msa1366020 | -0.810029 | 1.411859e-50 | -8.615850e-47 |
| Msa1283960 | Msa1366030 | -0.807500 | 4.904588e-50 | -8.615850e-47 |
| Msa1283960 | Msa1366060 | -0.807230 | 5.594923e-50 | -8.615850e-47 |
| Msa1283960 | Msa1366070 | -0.802377 | 5.774670e-49 | -8.615850e-47 |
| Msa1283960 | Msa1366140 | -0.822492 | 2.301424e-53 | -8.615850e-47 |
| Msa1283960 | Msa1368260 | -0.802596 | 5.203818e-49 | -8.615850e-47 |
| Msa1283960 | Msa1385260 | 0.822534 | 2.250757e-53 | -8.615850e-47 |
| Msa1283960 | Msa1385360 | -0.805727 | 1.160679e-49 | -8.615850e-47 |
| Msa1283960 | Msa1385390 | -0.803651 | 3.148273e-49 | -8.615850e-47 |
| Msa1283960 | Msa1385400 | -0.800901 | 1.159526e-48 | -8.615850e-47 |
| Msa1283960 | Msa1387450 | -0.845462 | 4.001225e-59 | -8.615850e-47 |
| Msa1283960 | Msa1391130 | -0.802947 | 4.405344e-49 | -8.615850e-47 |
| Msa1283960 | Msa1391140 | -0.807182 | 5.727172e-50 | -8.615850e-47 |
| Msa1283960 | Msa1391260 | -0.808016 | 3.808700e-50 | -8.615850e-47 |
| Msa1283960 | Msa1396240 | 0.814837 | 1.256984e-51 | -8.615850e-47 |
| Msa1283960 | Msa1407810 | 0.828643 | 8.020808e-55 | -8.615850e-47 |
| Msa1283960 | Msa1410160 | 0.851739 | 7.294366e-61 | -8.615850e-47 |
| Msa1283960 | Msa1417370 | 0.851625 | 7.857092e-61 | -8.615850e-47 |
| Msa1283960 | Msa1417930 | 0.826727 | 2.315117e-54 | -8.615850e-47 |
| Msa1283960 | Msa1422860 | 0.847560 | 1.070478e-59 | -8.615850e-47 |
| Msa1283960 | Msa1433360 | 0.851111 | 1.097667e-60 | -8.615850e-47 |
| Msa1283960 | Msa1437780 | 0.830197 | 3.362595e-55 | -8.615850e-47 |
| Msa1283960 | Msa1445530 | 0.913780 | 4.134265e-84 | -8.615850e-47 |
| Msa1283960 | Msa1450290 | 0.819755 | 9.831363e-53 | -8.615850e-47 |
| Msa1283960 | Msa1456040 | 0.816889 | 4.381945e-52 | -8.615850e-47 |
| Msa0365210 | Msa1283960 | 0.806133 | 9.535921e-50 | -8.615850e-47 |
| Msa0375330 | Msa1283960 | -0.802327 | 5.914405e-49 | -8.615850e-47 |
| Msa0384870 | Msa1283960 | 0.811732 | 6.041693e-51 | -8.615850e-47 |
| Msa0386560 | Msa1283960 | 0.802869 | 4.571779e-49 | -8.615850e-47 |
| Msa0394500 | Msa1283960 | 0.819958 | 8.837600e-53 | -8.615850e-47 |
| Msa0434090 | Msa1283960 | 0.820194 | 7.801650e-53 | -8.615850e-47 |
| Msa0437620 | Msa1283960 | 0.821831 | 3.275518e-53 | -8.615850e-47 |
| Msa0442090 | Msa1283960 | 0.805786 | 1.128192e-49 | -8.615850e-47 |
| Msa0457570 | Msa1283960 | 0.848339 | 6.526214e-60 | -8.615850e-47 |
| Msa0463820 | Msa1283960 | -0.809950 | 1.468556e-50 | -8.615850e-47 |
| Msa0477900 | Msa1283960 | 0.812722 | 3.674829e-51 | -8.615850e-47 |
| Msa0480900 | Msa1283960 | -0.829851 | 4.085174e-55 | -8.615850e-47 |
| Msa0481670 | Msa1283960 | 0.805171 | 1.518290e-49 | -8.615850e-47 |
| Msa0983600 | Msa1283960 | -0.811619 | 6.394881e-51 | -8.615850e-47 |
| Msa0983610 | Msa1283960 | -0.810569 | 1.079970e-50 | -8.615850e-47 |
| Msa1019420 | Msa1283960 | 0.842151 | 3.080588e-58 | -8.615850e-47 |
| Msa1021590 | Msa1283960 | 0.804980 | 1.664612e-49 | -8.615850e-47 |
| Msa1042300 | Msa1283960 | 0.824833 | 6.514738e-54 | -8.615850e-47 |
| Msa1044250 | Msa1283960 | 0.820892 | 5.394451e-53 | -8.615850e-47 |
| Msa1057620 | Msa1283960 | -0.804292 | 2.317191e-49 | -8.615850e-47 |
| Msa1078820 | Msa1283960 | 0.831661 | 1.471152e-55 | -8.615850e-47 |
| Msa1086760 | Msa1283960 | -0.802012 | 6.866615e-49 | -8.615850e-47 |
| Msa1086770 | Msa1283960 | -0.808838 | 2.543539e-50 | -8.615850e-47 |
| Msa1086940 | Msa1283960 | -0.806939 | 6.448040e-50 | -8.615850e-47 |
| Msa1087080 | Msa1283960 | -0.804425 | 2.173325e-49 | -8.615850e-47 |
| Msa1087090 | Msa1283960 | -0.808386 | 3.177510e-50 | -8.615850e-47 |
| Msa1087100 | Msa1283960 | -0.802201 | 6.278527e-49 | -8.615850e-47 |
| Msa1101980 | Msa1283960 | -0.802783 | 4.762413e-49 | -8.615850e-47 |
| Msa1102060 | Msa1283960 | -0.806936 | 6.455961e-50 | -8.615850e-47 |
| Msa1105640 | Msa1283960 | 0.814370 | 1.595117e-51 | -8.615850e-47 |
| Msa1106590 | Msa1283960 | 0.805031 | 1.624200e-49 | -8.615850e-47 |
| Msa0241750 | Msa1283960 | 0.803074 | 4.145898e-49 | -8.615850e-47 |
| Msa0262750 | Msa1283960 | 0.836504 | 9.005038e-57 | -8.615850e-47 |
| Msa0268280 | Msa1283960 | -0.800547 | 1.369469e-48 | -8.615850e-47 |
| Msa0269170 | Msa1283960 | -0.809955 | 1.464891e-50 | -8.615850e-47 |
| Msa0269220 | Msa1283960 | -0.817297 | 3.546783e-52 | -8.615850e-47 |
| Msa0270830 | Msa1283960 | -0.807130 | 5.873326e-50 | -8.615850e-47 |
| Msa0284800 | Msa1283960 | 0.872865 | 2.289765e-67 | -8.615850e-47 |
| Msa0300470 | Msa1283960 | 0.829738 | 4.350394e-55 | -8.615850e-47 |
| Msa0330520 | Msa1283960 | 0.841877 | 3.639758e-58 | -8.615850e-47 |
| Msa0334660 | Msa1283960 | 0.832273 | 1.038349e-55 | -8.615850e-47 |
| Msa0336460 | Msa1283960 | 0.810022 | 1.416835e-50 | -8.615850e-47 |
| Msa0337970 | Msa1283960 | 0.827591 | 1.437944e-54 | -8.615850e-47 |
| Msa0347780 | Msa1283960 | 0.814665 | 1.372639e-51 | -8.615850e-47 |
| Msa0356270 | Msa1283960 | 0.806642 | 7.451385e-50 | -8.615850e-47 |
| Msa0358300 | Msa1283960 | 0.803630 | 3.180961e-49 | -8.615850e-47 |
| Msa1111910 | Msa1283960 | 0.836689 | 8.077595e-57 | -8.615850e-47 |
| Msa1123970 | Msa1283960 | 0.832846 | 7.489247e-56 | -8.615850e-47 |
| Msa1130780 | Msa1283960 | 0.847117 | 1.416105e-59 | -8.615850e-47 |
| Msa1133750 | Msa1283960 | 0.832399 | 9.663461e-56 | -8.615850e-47 |
| Msa1149910 | Msa1283960 | 0.804048 | 2.604267e-49 | -8.615850e-47 |
| Msa1154320 | Msa1283960 | 0.869290 | 3.458813e-66 | -8.615850e-47 |
| Msa1166190 | Msa1283960 | 0.842407 | 2.635593e-58 | -8.615850e-47 |
| Msa1166290 | Msa1283960 | 0.845106 | 4.993421e-59 | -8.615850e-47 |
| Msa1169650 | Msa1283960 | 0.833701 | 4.584491e-56 | -8.615850e-47 |
| Msa1192360 | Msa1283960 | 0.820751 | 5.812134e-53 | -8.615850e-47 |
| Msa1194240 | Msa1283960 | 0.809407 | 1.921360e-50 | -8.615850e-47 |
| Msa0483980 | Msa1283960 | -0.801059 | 1.076674e-48 | -8.615850e-47 |
| Msa0486460 | Msa1283960 | 0.800754 | 1.242765e-48 | -8.615850e-47 |
| Msa0500920 | Msa1283960 | 0.842766 | 2.116498e-58 | -8.615850e-47 |
| Msa0521830 | Msa1283960 | 0.805398 | 1.360899e-49 | -8.615850e-47 |
| Msa0541880 | Msa1283960 | 0.808943 | 2.415473e-50 | -8.615850e-47 |
| Msa0541940 | Msa1283960 | 0.803112 | 4.071811e-49 | -8.615850e-47 |
| Msa0566280 | Msa1283960 | 0.807610 | 4.648233e-50 | -8.615850e-47 |
| Msa0567330 | Msa1283960 | 0.821970 | 3.041385e-53 | -8.615850e-47 |
| Msa0567570 | Msa1283960 | 0.815748 | 7.884609e-52 | -8.615850e-47 |
| Msa0570010 | Msa1283960 | 0.838320 | 3.084305e-57 | -8.615850e-47 |
| Msa0576320 | Msa1283960 | 0.807369 | 5.228870e-50 | -8.615850e-47 |
| Msa0856220 | Msa1283960 | 0.804037 | 2.618089e-49 | -8.615850e-47 |
| Msa0867660 | Msa1283960 | -0.810259 | 1.259935e-50 | -8.615850e-47 |
| Msa0908270 | Msa1283960 | -0.812368 | 4.392137e-51 | -8.615850e-47 |
| Msa0908280 | Msa1283960 | -0.803701 | 3.075181e-49 | -8.615850e-47 |
| Msa0908350 | Msa1283960 | -0.812632 | 3.844316e-51 | -8.615850e-47 |
| Msa0908470 | Msa1283960 | -0.806382 | 8.454086e-50 | -8.615850e-47 |
| Msa0908500 | Msa1283960 | -0.804583 | 2.014977e-49 | -8.615850e-47 |
| Msa0908510 | Msa1283960 | -0.804477 | 2.120077e-49 | -8.615850e-47 |
| Msa0908700 | Msa1283960 | -0.806562 | 7.745490e-50 | -8.615850e-47 |
| Msa0909260 | Msa1283960 | 0.916137 | 2.556764e-85 | -8.615850e-47 |
| Msa0924900 | Msa1283960 | -0.808155 | 3.558398e-50 | -8.615850e-47 |
| Msa0968180 | Msa1283960 | 0.800391 | 1.473596e-48 | -8.615850e-47 |
| Msa0972680 | Msa1283960 | 0.826009 | 3.432175e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1283960 | MtrunA17_Chr8g0355721 | 91.667 | 156 | 13 | 0 | 1 | 156 | 1 | 156 | 7.84e-105 | 296 |
| Msa1283960 | MtrunA17_Chr8g0355741 | 82.166 | 157 | 27 | 1 | 1 | 156 | 1 | 157 | 2.05e-92 | 265 |
| Msa1283960 | MtrunA17_Chr8g0355661 | 78.344 | 157 | 32 | 2 | 1 | 156 | 1 | 156 | 2.94e-88 | 254 |
| Msa1283960 | MtrunA17_Chr8g0355781 | 75.658 | 152 | 37 | 0 | 1 | 152 | 1 | 152 | 2.54e-85 | 246 |
| Msa1283960 | MtrunA17_Chr8g0355811 | 75.163 | 153 | 37 | 1 | 1 | 153 | 1 | 152 | 1.32e-83 | 242 |
| Msa1283960 | MtrunA17_Chr8g0355761 | 75.000 | 152 | 38 | 0 | 1 | 152 | 1 | 152 | 8.13e-82 | 238 |
| Msa1283960 | MtrunA17_Chr8g0355641 | 71.154 | 156 | 44 | 1 | 1 | 155 | 1 | 156 | 1.51e-81 | 237 |
| Msa1283960 | MtrunA17_Chr8g0355821 | 69.935 | 153 | 45 | 1 | 1 | 153 | 1 | 152 | 2.71e-78 | 229 |
| Msa1283960 | MtrunA17_Chr8g0355801 | 70.588 | 153 | 44 | 1 | 1 | 153 | 1 | 152 | 4.34e-77 | 226 |
| Msa1283960 | MtrunA17_Chr8g0355791 | 69.935 | 153 | 45 | 1 | 1 | 153 | 1 | 152 | 2.15e-76 | 224 |
| Msa1283960 | MtrunA17_Chr8g0355771 | 68.627 | 153 | 47 | 1 | 1 | 153 | 1 | 152 | 1.11e-74 | 220 |
| Msa1283960 | MtrunA17_Chr1g0160371 | 43.137 | 153 | 84 | 2 | 1 | 151 | 1 | 152 | 1.08e-39 | 131 |
| Msa1283960 | MtrunA17_Chr1g0160381 | 40.523 | 153 | 88 | 2 | 1 | 151 | 5 | 156 | 3.21e-39 | 130 |
| Msa1283960 | MtrunA17_Chr1g0160391 | 37.179 | 156 | 90 | 4 | 1 | 149 | 1 | 155 | 7.35e-28 | 101 |
| Msa1283960 | MtrunA17_Chr8g0339261 | 33.562 | 146 | 94 | 3 | 6 | 150 | 8 | 151 | 1.48e-25 | 95.5 |
| Msa1283960 | MtrunA17_Chr1g0160801 | 37.162 | 148 | 84 | 5 | 7 | 152 | 7 | 147 | 2.85e-24 | 91.7 |
| Msa1283960 | MtrunA17_Chr1g0160351 | 45.161 | 93 | 49 | 1 | 61 | 151 | 1 | 93 | 4.20e-21 | 82.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1283960 | AT5G28010.1 | 35.570 | 149 | 93 | 3 | 3 | 149 | 15 | 162 | 2.61e-25 | 95.5 |
| Msa1283960 | AT5G28010.2 | 35.570 | 149 | 93 | 3 | 3 | 149 | 15 | 162 | 2.61e-25 | 95.5 |
| Msa1283960 | AT1G70890.1 | 36.913 | 149 | 91 | 3 | 3 | 149 | 7 | 154 | 8.63e-25 | 94.0 |
| Msa1283960 | AT1G70840.1 | 32.886 | 149 | 97 | 3 | 3 | 149 | 20 | 167 | 1.35e-22 | 88.6 |
| Msa1283960 | AT1G70830.5 | 34.228 | 149 | 95 | 3 | 3 | 149 | 22 | 169 | 5.19e-22 | 87.0 |
| Msa1283960 | AT1G23120.1 | 30.872 | 149 | 98 | 3 | 1 | 149 | 1 | 144 | 9.20e-22 | 85.9 |
| Msa1283960 | AT1G70830.3 | 34.228 | 149 | 95 | 3 | 3 | 149 | 22 | 169 | 9.23e-22 | 87.0 |
| Msa1283960 | AT1G70830.2 | 34.228 | 149 | 95 | 3 | 3 | 149 | 22 | 169 | 3.07e-21 | 87.0 |
| Msa1283960 | AT5G28000.1 | 32.886 | 149 | 97 | 3 | 3 | 149 | 13 | 160 | 3.61e-21 | 84.7 |
| Msa1283960 | AT1G23120.2 | 31.469 | 143 | 93 | 3 | 7 | 149 | 57 | 194 | 3.68e-21 | 85.5 |
| Msa1283960 | AT1G70830.1 | 34.228 | 149 | 95 | 3 | 3 | 149 | 22 | 169 | 7.37e-21 | 87.0 |
| Msa1283960 | AT1G70830.1 | 32.886 | 149 | 97 | 3 | 3 | 149 | 184 | 331 | 2.48e-19 | 83.2 |
| Msa1283960 | AT1G70870.1 | 35.762 | 151 | 84 | 4 | 1 | 151 | 1 | 138 | 8.43e-21 | 83.2 |
| Msa1283960 | AT1G70830.4 | 32.886 | 149 | 97 | 3 | 3 | 149 | 137 | 284 | 1.11e-19 | 83.6 |
| Msa1283960 | AT1G70850.2 | 32.215 | 149 | 98 | 3 | 3 | 149 | 9 | 156 | 1.41e-19 | 82.0 |
| Msa1283960 | AT1G70850.3 | 32.215 | 149 | 98 | 3 | 3 | 149 | 9 | 156 | 2.79e-19 | 82.8 |
| Msa1283960 | AT1G70850.3 | 32.374 | 139 | 91 | 3 | 13 | 149 | 175 | 312 | 7.79e-18 | 79.0 |
| Msa1283960 | AT1G70850.1 | 32.215 | 149 | 98 | 3 | 3 | 149 | 9 | 156 | 2.79e-19 | 82.8 |
| Msa1283960 | AT1G70850.1 | 32.374 | 139 | 91 | 3 | 13 | 149 | 175 | 312 | 7.79e-18 | 79.0 |
| Msa1283960 | AT4G23670.1 | 34.641 | 153 | 97 | 3 | 1 | 152 | 1 | 151 | 2.86e-19 | 79.3 |
| Msa1283960 | AT1G70880.1 | 30.201 | 149 | 101 | 3 | 3 | 149 | 8 | 155 | 2.17e-18 | 77.4 |
| Msa1283960 | AT1G23130.1 | 29.054 | 148 | 103 | 2 | 3 | 149 | 10 | 156 | 6.94e-18 | 76.3 |
| Msa1283960 | AT2G01520.1 | 30.719 | 153 | 103 | 3 | 1 | 152 | 1 | 151 | 1.79e-16 | 72.0 |
| Msa1283960 | AT4G23680.1 | 30.719 | 153 | 103 | 3 | 1 | 152 | 1 | 151 | 2.26e-16 | 72.0 |
| Msa1283960 | AT1G35260.1 | 28.276 | 145 | 100 | 3 | 7 | 149 | 6 | 148 | 3.94e-16 | 71.2 |
| Msa1283960 | AT1G14930.1 | 31.677 | 161 | 93 | 5 | 1 | 153 | 1 | 152 | 4.29e-16 | 71.2 |
| Msa1283960 | AT4G14060.1 | 31.373 | 153 | 102 | 3 | 1 | 152 | 1 | 151 | 2.72e-15 | 68.9 |
| Msa1283960 | AT2G01530.1 | 30.719 | 153 | 103 | 3 | 1 | 152 | 1 | 151 | 3.55e-15 | 68.9 |
| Msa1283960 | AT1G24020.1 | 31.410 | 156 | 105 | 2 | 1 | 155 | 1 | 155 | 4.99e-14 | 65.9 |
| Msa1283960 | AT1G24020.2 | 31.410 | 156 | 105 | 2 | 1 | 155 | 1 | 155 | 4.99e-14 | 65.9 |
| Msa1283960 | AT1G35310.1 | 26.087 | 138 | 99 | 3 | 13 | 149 | 12 | 147 | 1.14e-13 | 64.7 |
| Msa1283960 | AT1G30990.1 | 30.667 | 150 | 100 | 4 | 1 | 149 | 1 | 147 | 3.79e-13 | 63.5 |
| Msa1283960 | AT1G14940.1 | 29.333 | 150 | 103 | 3 | 1 | 149 | 1 | 148 | 2.38e-12 | 61.6 |
| Msa1283960 | AT1G14950.1 | 28.289 | 152 | 106 | 3 | 1 | 151 | 1 | 150 | 1.09e-11 | 59.7 |
| Msa1283960 | AT3G26460.1 | 30.769 | 156 | 100 | 6 | 1 | 152 | 1 | 152 | 1.85e-11 | 58.9 |
Find 39 sgRNAs with CRISPR-Local
Find 154 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCTTCACCTTCATGAAGTT+TGG | 0.293563 | 8_3:+25789820 | None:intergenic |
| ATGGCACTGCTGCTGCTAAA+TGG | 0.310932 | 8_3:-25787848 | Msa1283960:CDS |
| CTTATATTTCTTCAAAGAAA+TGG | 0.343707 | 8_3:-25789960 | Msa1283960:exon |
| TATGTGATGAAATCAATAAA+TGG | 0.369456 | 8_3:-25787513 | Msa1283960:three_prime_UTR |
| CACCCTTATCAATTACTTCA+AGG | 0.382574 | 8_3:+25787871 | None:intergenic |
| TTATAGAGCTATCTTTGCTT+TGG | 0.392094 | 8_3:+25787728 | None:intergenic |
| ACTTTCATCAACTCACTCAT+TGG | 0.403061 | 8_3:-25790001 | None:intergenic |
| ATATTGTTGCATATGCATAT+TGG | 0.412178 | 8_3:-25787607 | Msa1283960:three_prime_UTR |
| TGTAACAAATAACTAGTAAT+GGG | 0.422186 | 8_3:-25787694 | Msa1283960:three_prime_UTR |
| CTAGTAATGGGTTATTGCAC+TGG | 0.428702 | 8_3:-25787682 | Msa1283960:three_prime_UTR |
| CATCCTTGAAGTAATTGATA+AGG | 0.438738 | 8_3:-25787874 | Msa1283960:CDS |
| AAGTATTCCATGTAGCCATT+TGG | 0.448595 | 8_3:+25787786 | None:intergenic |
| CTTCTATGTGATGTTTGTAA+TGG | 0.450639 | 8_3:-25787584 | Msa1283960:three_prime_UTR |
| AACACTTATAAGCTCTTTGG+TGG | 0.457999 | 8_3:-25787930 | Msa1283960:CDS |
| ATGTAACAAATAACTAGTAA+TGG | 0.468583 | 8_3:-25787695 | Msa1283960:three_prime_UTR |
| AAACACTGGACTTATGTCAT+AGG | 0.470664 | 8_3:-25789776 | Msa1283960:intron |
| AACTTCATGAAGGTGAAGAT+TGG | 0.483425 | 8_3:-25789817 | Msa1283960:CDS |
| ATCCTTGAAGTAATTGATAA+GGG | 0.486541 | 8_3:-25787873 | Msa1283960:CDS |
| AATGGGTTATTGCACTGGGT+TGG | 0.491034 | 8_3:-25787677 | Msa1283960:three_prime_UTR |
| AGATATTGATGAGCACTATA+AGG | 0.500590 | 8_3:-25787907 | Msa1283960:CDS |
| AATTAGTGTGATGCTTGTAA+TGG | 0.511418 | 8_3:-25787631 | Msa1283960:three_prime_UTR |
| TATTCCATGTAGCCATTTGG+AGG | 0.517921 | 8_3:+25787789 | None:intergenic |
| AGATTGGCATCACACTGATT+CGG | 0.519723 | 8_3:-25789801 | Msa1283960:CDS |
| AATGGCTACATGGAATACTT+TGG | 0.525683 | 8_3:-25787783 | Msa1283960:CDS |
| TGACCCTCCAAATGGCTACA+TGG | 0.526835 | 8_3:-25787793 | Msa1283960:CDS |
| GGTAAGCTTAGTACTGAAGT+TGG | 0.532755 | 8_3:-25789929 | Msa1283960:CDS |
| GAGGATATTGACCCTCCAAA+TGG | 0.540200 | 8_3:-25787801 | Msa1283960:CDS |
| GAAGTAATTGATAAGGGTGA+TGG | 0.549119 | 8_3:-25787867 | Msa1283960:CDS |
| TATGATGAACTCTTTCACAA+AGG | 0.564152 | 8_3:+25789843 | None:intergenic |
| TAGTAATGGGTTATTGCACT+GGG | 0.588711 | 8_3:-25787681 | Msa1283960:three_prime_UTR |
| CATCATACCAAACTTCATGA+AGG | 0.595182 | 8_3:-25789827 | Msa1283960:CDS |
| ACACTGATTCGGTTAAACAC+TGG | 0.614381 | 8_3:-25789790 | Msa1283960:CDS |
| ATAATTCACAACAGATGGCA+AGG | 0.621271 | 8_3:-25788003 | Msa1283960:intron |
| AGATTGTAGAACTTGTCAGC+GGG | 0.623742 | 8_3:+25789896 | None:intergenic |
| ATTCCATGTAGCCATTTGGA+GGG | 0.625101 | 8_3:+25787790 | None:intergenic |
| TTCAAAGAAATGGTGCTCTG+TGG | 0.636927 | 8_3:-25789950 | Msa1283960:exon |
| TAGATTGTAGAACTTGTCAG+CGG | 0.690373 | 8_3:+25789895 | None:intergenic |
| TGAATATGAGAAGATCAATG+AGG | 0.699788 | 8_3:-25787820 | Msa1283960:CDS |
| AGTGTGATGTCTGTACATGA+CGG | 0.731855 | 8_3:-25787557 | Msa1283960:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GTTGTTTTTTTTTTTTTTTT+AGG | + | chr8_3:25788655-25788674 | None:intergenic | 10.0% |
| !!! | GGAATAATAAATATTTTATA+AGG | + | chr8_3:25789177-25789196 | None:intergenic | 10.0% |
| !!! | TATTTTTGTATAGAAAAAAA+AGG | + | chr8_3:25789198-25789217 | None:intergenic | 10.0% |
| !! | TTCTATACAAAAATATTTAT+TGG | - | chr8_3:25789203-25789222 | Msa1283960:intron | 10.0% |
| !!! | ATAGTTTATTTGTTAAAAAA+TGG | - | chr8_3:25789243-25789262 | Msa1283960:intron | 10.0% |
| !!! | TAGTTTATTTGTTAAAAAAT+GGG | - | chr8_3:25789244-25789263 | Msa1283960:intron | 10.0% |
| !! | AAAATTTGTGAATTAAAAGA+AGG | - | chr8_3:25787964-25787983 | Msa1283960:CDS | 15.0% |
| !!! | AATTGCATTGTTTTTATTAA+GGG | + | chr8_3:25788039-25788058 | None:intergenic | 15.0% |
| !!! | AAATTGCATTGTTTTTATTA+AGG | + | chr8_3:25788040-25788059 | None:intergenic | 15.0% |
| !!! | AAAATTGCATTTTTTTTGTT+AGG | - | chr8_3:25788194-25788213 | Msa1283960:intron | 15.0% |
| !!! | AAATTGCATTTTTTTTGTTA+GGG | - | chr8_3:25788195-25788214 | Msa1283960:intron | 15.0% |
| !! | AAAAAAAAACAACAATCATT+TGG | - | chr8_3:25788662-25788681 | Msa1283960:intron | 15.0% |
| !! | AAAAAAAACAACAATCATTT+GGG | - | chr8_3:25788663-25788682 | Msa1283960:intron | 15.0% |
| !! | AAATTATCCTTATTAACTAT+TGG | + | chr8_3:25788875-25788894 | None:intergenic | 15.0% |
| !! | AATAGTTAATAAGGATAATT+TGG | - | chr8_3:25788874-25788893 | Msa1283960:intron | 15.0% |
| !!! | TAAGCAAAAAACTATATTTT+AGG | - | chr8_3:25789315-25789334 | Msa1283960:intron | 15.0% |
| !! | CTTATATTTCTTCAAAGAAA+TGG | - | chr8_3:25787529-25787548 | Msa1283960:three_prime_UTR | 20.0% |
| !! | AATCAAATAAGATGATGATT+TGG | + | chr8_3:25787852-25787871 | None:intergenic | 20.0% |
| !!! | ATTGCATTGTTTTTATTAAG+GGG | + | chr8_3:25788038-25788057 | None:intergenic | 20.0% |
| !!! | AATTGCATTTTTTTTGTTAG+GGG | - | chr8_3:25788196-25788215 | Msa1283960:intron | 20.0% |
| !!! | AGTATTTAAAACTTTAAGAG+AGG | + | chr8_3:25788694-25788713 | None:intergenic | 20.0% |
| !! | AGAAAAAGTTATTATTGCAT+TGG | + | chr8_3:25788788-25788807 | None:intergenic | 20.0% |
| !!! | TCGTTTTAAAAGTAATACTT+TGG | + | chr8_3:25788851-25788870 | None:intergenic | 20.0% |
| !! | AGATTATAAGATCTCAAAAA+AGG | - | chr8_3:25789035-25789054 | Msa1283960:intron | 20.0% |
| !! | ATGTAACAAATAACTAGTAA+TGG | - | chr8_3:25789794-25789813 | Msa1283960:CDS | 20.0% |
| !! | TGTAACAAATAACTAGTAAT+GGG | - | chr8_3:25789795-25789814 | Msa1283960:CDS | 20.0% |
| !! | TATGTGATGAAATCAATAAA+TGG | - | chr8_3:25789976-25789995 | Msa1283960:five_prime_UTR | 20.0% |
| !!! | CAACTTTTTTGCAAAGATAA+GGG | - | chr8_3:25788127-25788146 | Msa1283960:intron | 25.0% |
| !!! | AACTTTTTTGCAAAGATAAG+GGG | - | chr8_3:25788128-25788147 | Msa1283960:intron | 25.0% |
| !!! | ATTGCATTTTTTTTGTTAGG+GGG | - | chr8_3:25788197-25788216 | Msa1283960:intron | 25.0% |
| ! | ATAAGAAAGAAACAAGTACA+TGG | - | chr8_3:25788273-25788292 | Msa1283960:intron | 25.0% |
| ! | TTTGGGAAGAAAAAAAATCA+GGG | + | chr8_3:25788496-25788515 | None:intergenic | 25.0% |
| !!! | TTTTGGGAAGAAAAAAAATC+AGG | + | chr8_3:25788497-25788516 | None:intergenic | 25.0% |
| !!! | ATGATTGTTGATTTGTCATT+AGG | + | chr8_3:25788625-25788644 | None:intergenic | 25.0% |
| ! | AAACGAACCAATAGTTAATA+AGG | - | chr8_3:25788865-25788884 | Msa1283960:intron | 25.0% |
| ! | AACCATATAAAGAATAACTG+TGG | - | chr8_3:25789147-25789166 | Msa1283960:intron | 25.0% |
| ! | AACCACAGTTATTCTTTATA+TGG | + | chr8_3:25789152-25789171 | None:intergenic | 25.0% |
| !! | TTTTTGCTTATATTAGTGAC+CGG | + | chr8_3:25789305-25789324 | None:intergenic | 25.0% |
| !! | TTTTTGCTTATAATAGTGAC+CGG | - | chr8_3:25789414-25789433 | Msa1283960:intron | 25.0% |
| ! | AAAAACACTTATAAGCTCTT+TGG | - | chr8_3:25789556-25789575 | Msa1283960:intron | 25.0% |
| ! | ATCCTTGAAGTAATTGATAA+GGG | - | chr8_3:25789616-25789635 | Msa1283960:intron | 25.0% |
| ! | ATATTGTTGCATATGCATAT+TGG | - | chr8_3:25789882-25789901 | Msa1283960:CDS | 25.0% |
| TATGATGAACTCTTTCACAA+AGG | + | chr8_3:25787649-25787668 | None:intergenic | 30.0% | |
| TTGCTACAATGACAAACATA+GGG | + | chr8_3:25788009-25788028 | None:intergenic | 30.0% | |
| ATTGCTACAATGACAAACAT+AGG | + | chr8_3:25788010-25788029 | None:intergenic | 30.0% | |
| ! | GTTTGTCATTGTAGCAATTT+TGG | - | chr8_3:25788012-25788031 | Msa1283960:intron | 30.0% |
| AAGCATAGCTGGAAAAATTA+GGG | + | chr8_3:25788069-25788088 | None:intergenic | 30.0% | |
| TTGCAAAAAAGTTGCGATTA+CGG | + | chr8_3:25788121-25788140 | None:intergenic | 30.0% | |
| !!! | GCAACTTTTTTGCAAAGATA+AGG | - | chr8_3:25788126-25788145 | Msa1283960:intron | 30.0% |
| AGAGCATATTTCTCTAAACA+TGG | - | chr8_3:25788156-25788175 | Msa1283960:intron | 30.0% | |
| TCTCTAAACATGGCAAAAAT+AGG | - | chr8_3:25788166-25788185 | Msa1283960:intron | 30.0% | |
| CTCTAAACATGGCAAAAATA+GGG | - | chr8_3:25788167-25788186 | Msa1283960:intron | 30.0% | |
| TCTAAACATGGCAAAAATAG+GGG | - | chr8_3:25788168-25788187 | Msa1283960:intron | 30.0% | |
| TTGGGAAGAAAAAAAATCAG+GGG | + | chr8_3:25788495-25788514 | None:intergenic | 30.0% | |
| ! | CTATCGTCAAAATGGTTTTT+GGG | + | chr8_3:25788513-25788532 | None:intergenic | 30.0% |
| ! | TCTATCGTCAAAATGGTTTT+TGG | + | chr8_3:25788514-25788533 | None:intergenic | 30.0% |
| TTAAGCATCTATCGTCAAAA+TGG | + | chr8_3:25788521-25788540 | None:intergenic | 30.0% | |
| CGGGAAATATAATCATTCAT+AGG | - | chr8_3:25788579-25788598 | Msa1283960:intron | 30.0% | |
| ATTTGTCATTAGGTTCTATG+GGG | + | chr8_3:25788615-25788634 | None:intergenic | 30.0% | |
| GATTTGTCATTAGGTTCTAT+GGG | + | chr8_3:25788616-25788635 | None:intergenic | 30.0% | |
| ! | TGATTTGTCATTAGGTTCTA+TGG | + | chr8_3:25788617-25788636 | None:intergenic | 30.0% |
| !!! | GACACTCATTTTAAAATGGA+GGG | + | chr8_3:25788717-25788736 | None:intergenic | 30.0% |
| !! | AAGCGACACTCATTTTAAAA+TGG | + | chr8_3:25788721-25788740 | None:intergenic | 30.0% |
| !!! | TTCAAAATGAGTGTCGTTTT+AGG | + | chr8_3:25788956-25788975 | None:intergenic | 30.0% |
| CACTCAATTAATGATGTATG+TGG | - | chr8_3:25789340-25789359 | Msa1283960:intron | 30.0% | |
| AGATATTGATGAGCACTATA+AGG | - | chr8_3:25789582-25789601 | Msa1283960:intron | 30.0% | |
| CATCCTTGAAGTAATTGATA+AGG | - | chr8_3:25789615-25789634 | Msa1283960:intron | 30.0% | |
| TGAATATGAGAAGATCAATG+AGG | - | chr8_3:25789669-25789688 | Msa1283960:intron | 30.0% | |
| TTATAGAGCTATCTTTGCTT+TGG | + | chr8_3:25789764-25789783 | None:intergenic | 30.0% | |
| AATTAGTGTGATGCTTGTAA+TGG | - | chr8_3:25789858-25789877 | Msa1283960:CDS | 30.0% | |
| CTTCTATGTGATGTTTGTAA+TGG | - | chr8_3:25789905-25789924 | Msa1283960:CDS | 30.0% | |
| TAGATTGTAGAACTTGTCAG+CGG | + | chr8_3:25787597-25787616 | None:intergenic | 35.0% | |
| CATCATACCAAACTTCATGA+AGG | - | chr8_3:25787662-25787681 | Msa1283960:three_prime_UTR | 35.0% | |
| ATCTTCACCTTCATGAAGTT+TGG | + | chr8_3:25787672-25787691 | None:intergenic | 35.0% | |
| AACTTCATGAAGGTGAAGAT+TGG | - | chr8_3:25787672-25787691 | Msa1283960:three_prime_UTR | 35.0% | |
| AAACACTGGACTTATGTCAT+AGG | - | chr8_3:25787713-25787732 | Msa1283960:exon | 35.0% | |
| !! | TGATGATTTGGTTATCGATC+AGG | + | chr8_3:25787840-25787859 | None:intergenic | 35.0% |
| TGCTACAATGACAAACATAG+GGG | + | chr8_3:25788008-25788027 | None:intergenic | 35.0% | |
| AGCATAGCTGGAAAAATTAG+GGG | + | chr8_3:25788068-25788087 | None:intergenic | 35.0% | |
| CAAGCATAGCTGGAAAAATT+AGG | + | chr8_3:25788070-25788089 | None:intergenic | 35.0% | |
| ! | CTAATTTTTCCAGCTATGCT+TGG | - | chr8_3:25788068-25788087 | Msa1283960:intron | 35.0% |
| CTAAACATGGCAAAAATAGG+GGG | - | chr8_3:25788169-25788188 | Msa1283960:intron | 35.0% | |
| TCTAGAAGTCCTAGTTCAAA+TGG | + | chr8_3:25788403-25788422 | None:intergenic | 35.0% | |
| TACATTCGACAAACCAAACA+TGG | - | chr8_3:25788466-25788485 | Msa1283960:intron | 35.0% | |
| AACATAGTCAAAAGGAGAAG+AGG | + | chr8_3:25788556-25788575 | None:intergenic | 35.0% | |
| !! | CTCCTTTTGACTATGTTGAA+CGG | - | chr8_3:25788559-25788578 | Msa1283960:intron | 35.0% |
| !! | TCCTTTTGACTATGTTGAAC+GGG | - | chr8_3:25788560-25788579 | Msa1283960:intron | 35.0% |
| ATTAGGTTCTATGGGGAATA+TGG | + | chr8_3:25788608-25788627 | None:intergenic | 35.0% | |
| !!! | CGACACTCATTTTAAAATGG+AGG | + | chr8_3:25788718-25788737 | None:intergenic | 35.0% |
| ! | TGTGCAGAGTATTAATTGGA+GGG | + | chr8_3:25788822-25788841 | None:intergenic | 35.0% |
| ! | GTAGTGTGCAGAGTATTAAT+TGG | + | chr8_3:25788826-25788845 | None:intergenic | 35.0% |
| !!! | GACACTCATTTTGAAACAGA+GGG | - | chr8_3:25788961-25788980 | Msa1283960:intron | 35.0% |
| TGTTGTGAATTATGATGGCA+CGG | + | chr8_3:25789479-25789498 | None:intergenic | 35.0% | |
| CCATCTGTTGTGAATTATGA+TGG | + | chr8_3:25789484-25789503 | None:intergenic | 35.0% | |
| CCATCATAATTCACAACAGA+TGG | - | chr8_3:25789481-25789500 | Msa1283960:intron | 35.0% | |
| ATAATTCACAACAGATGGCA+AGG | - | chr8_3:25789486-25789505 | Msa1283960:intron | 35.0% | |
| AACACTTATAAGCTCTTTGG+TGG | - | chr8_3:25789559-25789578 | Msa1283960:intron | 35.0% | |
| CACCCTTATCAATTACTTCA+AGG | + | chr8_3:25789621-25789640 | None:intergenic | 35.0% | |
| GAAGTAATTGATAAGGGTGA+TGG | - | chr8_3:25789622-25789641 | Msa1283960:intron | 35.0% | |
| AAGTATTCCATGTAGCCATT+TGG | + | chr8_3:25789706-25789725 | None:intergenic | 35.0% | |
| AATGGCTACATGGAATACTT+TGG | - | chr8_3:25789706-25789725 | Msa1283960:intron | 35.0% | |
| !! | TAGTAATGGGTTATTGCACT+GGG | - | chr8_3:25789808-25789827 | Msa1283960:CDS | 35.0% |
| TTCAAAGAAATGGTGCTCTG+TGG | - | chr8_3:25787539-25787558 | Msa1283960:three_prime_UTR | 40.0% | |
| ! | GGTAAGCTTAGTACTGAAGT+TGG | - | chr8_3:25787560-25787579 | Msa1283960:three_prime_UTR | 40.0% |
| AGATTGTAGAACTTGTCAGC+GGG | + | chr8_3:25787596-25787615 | None:intergenic | 40.0% | |
| ! | AGATTGGCATCACACTGATT+CGG | - | chr8_3:25787688-25787707 | Msa1283960:three_prime_UTR | 40.0% |
| !! | ACACTGATTCGGTTAAACAC+TGG | - | chr8_3:25787699-25787718 | Msa1283960:three_prime_UTR | 40.0% |
| GCTACAATGACAAACATAGG+GGG | + | chr8_3:25788007-25788026 | None:intergenic | 40.0% | |
| CATAGCTGGAAAAATTAGGG+GGG | + | chr8_3:25788066-25788085 | None:intergenic | 40.0% | |
| GCATAGCTGGAAAAATTAGG+GGG | + | chr8_3:25788067-25788086 | None:intergenic | 40.0% | |
| TTAGGGGGTCAAAATTGCTA+CGG | - | chr8_3:25788212-25788231 | Msa1283960:intron | 40.0% | |
| TAAACTCACACACAGCTGTA+AGG | - | chr8_3:25788325-25788344 | Msa1283960:intron | 40.0% | |
| TCAAATGGCAAATGCCGAAA+TGG | + | chr8_3:25788388-25788407 | None:intergenic | 40.0% | |
| AGGACTTCTAGACAAGTACA+TGG | - | chr8_3:25788411-25788430 | Msa1283960:intron | 40.0% | |
| AAATCAGGGGTAACCATGTT+TGG | + | chr8_3:25788482-25788501 | None:intergenic | 40.0% | |
| ATAGTCAAAAGGAGAAGAGG+TGG | + | chr8_3:25788553-25788572 | None:intergenic | 40.0% | |
| TCCCGTTCAACATAGTCAAA+AGG | + | chr8_3:25788564-25788583 | None:intergenic | 40.0% | |
| ! | GTGTGCAGAGTATTAATTGG+AGG | + | chr8_3:25788823-25788842 | None:intergenic | 40.0% |
| !!! | CGACACTCATTTTGAAACAG+AGG | - | chr8_3:25788960-25788979 | Msa1283960:intron | 40.0% |
| TAGTTGCTATATACACCCTC+CGG | - | chr8_3:25789283-25789302 | Msa1283960:intron | 40.0% | |
| TGCTTATATTAGTGACCGGA+GGG | + | chr8_3:25789301-25789320 | None:intergenic | 40.0% | |
| TTGCTTATATTAGTGACCGG+AGG | + | chr8_3:25789302-25789321 | None:intergenic | 40.0% | |
| TTGCTTATAATAGTGACCGG+AGG | - | chr8_3:25789417-25789436 | Msa1283960:intron | 40.0% | |
| TGCTTATAATAGTGACCGGA+GGG | - | chr8_3:25789418-25789437 | Msa1283960:intron | 40.0% | |
| TGAAAACTTTGTACACCCTC+CGG | + | chr8_3:25789436-25789455 | None:intergenic | 40.0% | |
| GTTGTGAATTATGATGGCAC+GGG | + | chr8_3:25789478-25789497 | None:intergenic | 40.0% | |
| ATTCCATGTAGCCATTTGGA+GGG | + | chr8_3:25789702-25789721 | None:intergenic | 40.0% | |
| TATTCCATGTAGCCATTTGG+AGG | + | chr8_3:25789703-25789722 | None:intergenic | 40.0% | |
| !! | CTAGTAATGGGTTATTGCAC+TGG | - | chr8_3:25789807-25789826 | Msa1283960:CDS | 40.0% |
| AGTGTGATGTCTGTACATGA+CGG | - | chr8_3:25789932-25789951 | Msa1283960:CDS | 40.0% | |
| ! | CGGCATTTGCCATTTGAACT+AGG | - | chr8_3:25788391-25788410 | Msa1283960:intron | 45.0% |
| GAGGATATTGACCCTCCAAA+TGG | - | chr8_3:25789688-25789707 | Msa1283960:intron | 45.0% | |
| !! | AATGGGTTATTGCACTGGGT+TGG | - | chr8_3:25789812-25789831 | Msa1283960:CDS | 45.0% |
| !!! | GCGATTACGGCCCCTTTTTT+GGG | + | chr8_3:25788108-25788127 | None:intergenic | 50.0% |
| !!! | TGCGATTACGGCCCCTTTTT+TGG | + | chr8_3:25788109-25788128 | None:intergenic | 50.0% |
| CACACACAGCTGTAAGGTCT+CGG | - | chr8_3:25788331-25788350 | Msa1283960:intron | 50.0% | |
| ACACACAGCTGTAAGGTCTC+GGG | - | chr8_3:25788332-25788351 | Msa1283960:intron | 50.0% | |
| AAATGCCGAAATGGCAAGGC+CGG | + | chr8_3:25788379-25788398 | None:intergenic | 50.0% | |
| TGGCAAATGCCGAAATGGCA+AGG | + | chr8_3:25788383-25788402 | None:intergenic | 50.0% | |
| ATGGCACTGCTGCTGCTAAA+TGG | - | chr8_3:25789641-25789660 | Msa1283960:intron | 50.0% | |
| TGACCCTCCAAATGGCTACA+TGG | - | chr8_3:25789696-25789715 | Msa1283960:intron | 50.0% | |
| !!! | CCCTTTTTTGGGACACGTGG+CGG | + | chr8_3:25788097-25788116 | None:intergenic | 55.0% |
| CCGCCACGTGTCCCAAAAAA+GGG | - | chr8_3:25788094-25788113 | Msa1283960:intron | 55.0% | |
| CGCCACGTGTCCCAAAAAAG+GGG | - | chr8_3:25788095-25788114 | Msa1283960:intron | 55.0% | |
| GGGGGTCAAAATTGCTACGG+CGG | - | chr8_3:25788215-25788234 | Msa1283960:intron | 55.0% | |
| TGCTACGGCGGCAAACATAG+AGG | - | chr8_3:25788227-25788246 | Msa1283960:intron | 55.0% | |
| GCTACGGCGGCAAACATAGA+GGG | - | chr8_3:25788228-25788247 | Msa1283960:intron | 55.0% | |
| CAAACCCGAGTCACGACATC+CGG | - | chr8_3:25788357-25788376 | Msa1283960:intron | 55.0% | |
| ! | GACATCCGGCCTTGCCATTT+CGG | - | chr8_3:25788371-25788390 | Msa1283960:intron | 55.0% |
| TGGCGGCTTCCAAGCATAGC+TGG | + | chr8_3:25788080-25788099 | None:intergenic | 60.0% | |
| GCCGCCACGTGTCCCAAAAA+AGG | - | chr8_3:25788093-25788112 | Msa1283960:intron | 60.0% | |
| !!! | GGCCCCTTTTTTGGGACACG+TGG | + | chr8_3:25788100-25788119 | None:intergenic | 60.0% |
| AAGGCCGGATGTCGTGACTC+GGG | + | chr8_3:25788364-25788383 | None:intergenic | 60.0% | |
| CAAGGCCGGATGTCGTGACT+CGG | + | chr8_3:25788365-25788384 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 25787497 | 25790014 | 25787497 | ID=Msa1283960;Name=Msa1283960 |
| chr8_3 | mRNA | 25787497 | 25790014 | 25787497 | ID=Msa1283960-mRNA-1;Parent=Msa1283960;Name=Msa1283960-mRNA-1;_AED=0.28;_eAED=0.28;_QI=51|1|1|1|1|1|2|231|156 |
| chr8_3 | exon | 25787497 | 25788011 | 25787497 | ID=Msa1283960-mRNA-1:exon:9072;Parent=Msa1283960-mRNA-1 |
| chr8_3 | exon | 25789777 | 25790014 | 25789777 | ID=Msa1283960-mRNA-1:exon:9071;Parent=Msa1283960-mRNA-1 |
| chr8_3 | five_prime_UTR | 25789964 | 25790014 | 25789964 | ID=Msa1283960-mRNA-1:five_prime_utr;Parent=Msa1283960-mRNA-1 |
| chr8_3 | CDS | 25789777 | 25789963 | 25789777 | ID=Msa1283960-mRNA-1:cds;Parent=Msa1283960-mRNA-1 |
| chr8_3 | CDS | 25787728 | 25788011 | 25787728 | ID=Msa1283960-mRNA-1:cds;Parent=Msa1283960-mRNA-1 |
| chr8_3 | three_prime_UTR | 25787497 | 25787727 | 25787497 | ID=Msa1283960-mRNA-1:three_prime_utr;Parent=Msa1283960-mRNA-1 |
| Gene Sequence |
| Protein sequence |
