AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0446020

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0446020 MtrunA17_Chr3g0086811 98.324 358 6 0 1 358 1 358 0.0 726
Msa0446020 MtrunA17_Chr1g0201361 31.595 326 172 5 12 336 34 309 1.73e-44 155
Msa0446020 MtrunA17_Chr8g0386871 32.609 322 174 6 15 332 306 588 1.80e-43 158
Msa0446020 MtrunA17_Chr8g0383321 32.039 309 160 5 29 337 53 311 5.34e-42 149
Msa0446020 MtrunA17_Chr5g0431531 29.674 337 196 7 9 338 22 324 1.67e-34 129
Msa0446020 MtrunA17_Chr1g0200171 29.338 317 166 10 24 333 521 786 1.29e-33 132
Msa0446020 MtrunA17_Chr6g0463351 33.559 295 151 8 42 328 81 338 1.34e-33 127
Msa0446020 MtrunA17_Chr3g0131501 27.545 334 199 9 6 332 184 481 1.78e-29 118
Msa0446020 MtrunA17_Chr2g0296061 28.704 324 181 7 31 326 18 319 2.07e-29 115
Msa0446020 MtrunA17_Chr2g0296061 29.082 196 124 6 128 321 17 199 2.58e-13 70.1
Msa0446020 MtrunA17_Chr8g0366791 30.380 316 185 11 24 329 5 295 1.89e-28 112
Msa0446020 MtrunA17_Chr8g0366791 27.731 238 127 7 3 227 91 296 1.89e-14 73.2
Msa0446020 MtrunA17_Chr8g0366791 28.037 214 120 7 128 331 11 200 9.15e-11 62.0
Msa0446020 MtrunA17_Chr4g0067231 28.221 326 180 10 31 325 17 319 8.67e-28 111
Msa0446020 MtrunA17_Chr4g0067231 29.744 195 126 3 128 321 16 200 1.50e-14 73.9
Msa0446020 MtrunA17_Chr4g0067231 23.556 225 136 6 18 226 119 323 7.69e-11 62.8
Msa0446020 MtrunA17_Chr7g0269701 27.044 318 191 9 31 337 25 312 2.36e-27 109
Msa0446020 MtrunA17_Chr7g0269701 24.510 204 128 4 43 243 138 318 2.66e-12 67.0
Msa0446020 MtrunA17_Chr5g0411411 29.283 321 182 12 24 329 5 295 5.12e-27 108
Msa0446020 MtrunA17_Chr5g0411411 27.602 221 122 6 20 227 101 296 5.28e-12 65.9
Msa0446020 MtrunA17_Chr8g0385571 26.888 331 205 8 6 332 206 503 1.09e-26 110
Msa0446020 MtrunA17_Chr8g0372531 27.645 293 182 9 42 325 28 299 1.32e-24 102
Msa0446020 MtrunA17_Chr8g0372531 31.250 192 103 5 142 330 30 195 7.65e-15 74.3
Msa0446020 MtrunA17_Chr8g0372531 25.123 203 144 4 31 233 116 310 1.71e-13 70.5
Msa0446020 MtrunA17_Chr7g0240341 25.625 320 190 10 27 329 24 312 2.05e-24 101
Msa0446020 MtrunA17_Chr7g0240341 23.645 203 135 2 24 226 130 312 1.49e-13 70.9
Msa0446020 MtrunA17_Chr7g0240341 23.629 237 159 4 104 337 4 221 3.63e-12 66.6
Msa0446020 MtrunA17_Chr5g0396801 24.855 346 213 8 5 329 17 336 9.12e-24 100
Msa0446020 MtrunA17_Chr5g0396801 25.116 215 138 4 126 338 38 231 1.71e-11 64.7
Msa0446020 MtrunA17_Chr8g0347451 23.582 335 197 8 24 329 47 351 1.60e-23 100
Msa0446020 MtrunA17_Chr8g0347451 25.561 223 143 4 118 338 43 244 5.36e-12 66.2
Msa0446020 MtrunA17_Chr7g0252401 25.625 320 191 9 21 332 200 480 7.91e-23 99.4
Msa0446020 MtrunA17_Chr1g0195101 27.000 300 172 10 44 329 35 301 1.91e-22 96.3
Msa0446020 MtrunA17_Chr4g0028531 27.000 300 187 7 25 319 19 291 2.08e-22 96.3
Msa0446020 MtrunA17_Chr3g0135861 25.846 325 211 8 15 328 21 326 2.04e-21 94.0
Msa0446020 MtrunA17_Chr4g0063561 25.574 305 187 7 25 325 120 388 2.31e-21 94.4
Msa0446020 MtrunA17_Chr4g0063561 25.455 220 125 6 116 333 117 299 8.78e-11 62.8
Msa0446020 MtrunA17_Chr3g0137941 24.359 312 188 7 26 329 120 391 3.58e-21 94.0
Msa0446020 MtrunA17_Chr3g0137941 27.679 224 132 7 3 225 196 390 1.56e-13 71.2
Msa0446020 MtrunA17_Chr3g0137941 27.753 227 124 7 109 333 109 297 9.48e-13 68.9
Msa0446020 MtrunA17_Chr1g0149111 25.000 316 181 8 25 328 136 407 7.28e-21 93.2
Msa0446020 MtrunA17_Chr1g0149111 26.339 224 135 7 3 225 213 407 1.51e-12 68.2
Msa0446020 MtrunA17_Chr1g0149111 31.757 148 89 4 188 333 177 314 1.74e-12 68.2
Msa0446020 MtrunA17_Chr4g0046981 24.104 307 208 5 25 326 9 295 1.38e-20 90.9
Msa0446020 MtrunA17_Chr4g0046981 23.288 219 137 4 123 335 9 202 2.44e-12 67.0
Msa0446020 MtrunA17_Chr6g0488081 24.848 330 217 9 20 342 10 315 1.66e-20 90.9
Msa0446020 MtrunA17_Chr5g0423111 25.157 318 201 10 44 350 37 328 3.07e-20 90.5
Msa0446020 MtrunA17_Chr5g0423111 25.405 185 118 4 43 224 134 301 2.38e-11 64.3
Msa0446020 MtrunA17_Chr4g0004571 29.582 311 185 9 26 332 14 294 1.59e-19 87.8
Msa0446020 MtrunA17_Chr2g0293621 25.904 332 186 10 3 309 1 297 2.41e-18 84.7
Msa0446020 MtrunA17_Chr6g0455381 25.321 312 171 11 42 329 31 304 8.35e-18 83.2
Msa0446020 MtrunA17_Chr7g0219891 27.027 296 146 14 42 309 35 288 2.38e-16 79.0
Msa0446020 MtrunA17_Chr4g0006851 23.793 290 177 7 44 328 105 355 2.60e-16 79.3
Msa0446020 MtrunA17_Chr7g0242311 22.222 288 184 6 44 328 103 353 4.90e-16 78.6
Msa0446020 MtrunA17_Chr4g0008061 24.351 308 192 9 28 325 15 291 8.59e-16 77.0
Msa0446020 MtrunA17_Chr3g0103681 22.812 320 211 8 20 331 7 298 9.24e-16 77.0
Msa0446020 MtrunA17_Chr4g0000261 25.321 312 193 9 26 325 64 347 1.14e-15 77.4
Msa0446020 MtrunA17_Chr5g0436041 24.299 321 199 8 27 333 33 323 9.96e-15 74.3
Msa0446020 MtrunA17_Chr3g0135801 27.638 199 123 4 28 225 141 319 1.03e-14 74.3
Msa0446020 MtrunA17_Chr7g0241521 23.101 316 209 9 16 325 6 293 1.55e-14 73.6
Msa0446020 MtrunA17_Chr2g0331771 28.125 288 169 10 24 305 152 407 2.37e-14 73.9
Msa0446020 MtrunA17_Chr3g0133111 23.373 338 200 10 26 333 4 312 6.41e-14 71.6
Msa0446020 MtrunA17_Chr3g0115801 21.474 312 201 10 31 328 119 400 2.32e-12 67.8
Msa0446020 MtrunA17_Chr7g0275411 21.802 344 213 10 27 334 15 338 2.48e-12 67.4
Msa0446020 MtrunA17_Chr8g0343381 25.641 273 160 6 28 276 33 286 2.56e-12 67.4
Msa0446020 MtrunA17_Chr3g0126331 25.000 288 175 10 65 334 126 390 3.44e-12 67.0
Msa0446020 MtrunA17_Chr3g0136041 22.663 353 237 7 4 334 8 346 5.77e-12 66.2
Msa0446020 MtrunA17_Chr8g0382201 22.186 311 200 9 31 328 198 479 9.13e-12 66.2
Msa0446020 MtrunA17_Chr8g0385891 23.794 311 183 12 11 308 52 321 3.41e-11 63.9
Msa0446020 MtrunA17_Chr1g0196921 30.682 176 87 7 142 310 30 177 3.92e-11 63.2
Msa0446020 MtrunA17_Chr7g0251981 25.862 290 155 13 35 308 85 330 6.75e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0446020 AT1G74240.1 68.975 361 100 3 1 353 1 357 4.78e-169 476
Msa0446020 AT1G74240.2 71.246 313 86 2 41 353 1 309 1.50e-149 424
Msa0446020 AT4G39460.2 33.028 327 164 6 16 337 41 317 1.81e-47 164
Msa0446020 AT4G39460.1 33.028 327 164 6 16 337 41 317 1.81e-47 164
Msa0446020 AT4G39460.3 33.028 327 164 6 16 337 41 317 1.81e-47 164
Msa0446020 AT1G34065.1 32.595 316 161 6 21 334 73 338 1.40e-44 157
Msa0446020 AT1G34065.2 32.595 316 161 6 21 334 66 331 1.70e-44 156
Msa0446020 AT2G26360.1 29.870 308 170 6 24 329 111 374 2.20e-37 139
Msa0446020 AT4G11440.1 29.904 311 180 5 22 328 324 600 8.46e-36 137
Msa0446020 AT4G11440.2 29.904 311 180 5 22 328 324 600 8.46e-36 137
Msa0446020 AT1G07030.1 29.377 337 192 9 7 332 19 320 1.05e-31 122
Msa0446020 AT2G30160.1 29.275 345 197 9 4 333 11 323 2.09e-31 121
Msa0446020 AT2G35800.1 27.097 310 175 7 24 329 541 803 3.72e-30 122
Msa0446020 AT5G46800.2 30.599 317 190 9 25 332 5 300 5.74e-30 117
Msa0446020 AT5G46800.3 30.599 317 190 9 25 332 5 300 5.74e-30 117
Msa0446020 AT5G46800.1 30.599 317 190 9 25 332 5 300 5.74e-30 117
Msa0446020 AT1G25380.1 27.778 324 190 10 44 354 37 329 7.29e-27 109
Msa0446020 AT1G25380.1 25.789 190 110 5 43 224 136 302 8.83e-13 69.3
Msa0446020 AT1G25380.2 27.778 324 190 10 44 354 37 329 7.29e-27 109
Msa0446020 AT1G25380.2 25.789 190 110 5 43 224 136 302 8.83e-13 69.3
Msa0446020 AT5G48970.1 28.135 327 182 8 31 326 25 329 1.60e-26 108
Msa0446020 AT5G48970.1 25.616 203 138 4 128 329 24 214 2.89e-11 64.3
Msa0446020 AT3G53940.1 28.107 338 194 12 16 337 61 365 1.88e-26 108
Msa0446020 AT3G53940.1 26.016 246 141 6 107 337 48 267 4.24e-13 70.1
Msa0446020 AT5G42130.1 30.169 295 162 6 42 328 132 390 5.74e-26 108
Msa0446020 AT2G47490.1 28.947 304 182 9 44 340 33 309 1.92e-25 104
Msa0446020 AT3G21390.1 28.012 332 187 9 31 332 22 331 2.57e-25 105
Msa0446020 AT3G21390.1 28.788 198 120 6 128 321 21 201 4.07e-12 67.0
Msa0446020 AT3G21390.2 28.012 332 187 9 31 332 44 353 3.34e-25 105
Msa0446020 AT3G21390.2 29.648 199 117 7 128 321 43 223 4.51e-12 67.0
Msa0446020 AT4G32400.1 26.774 310 185 6 25 329 111 383 8.90e-23 98.6
Msa0446020 AT4G32400.1 25.676 222 125 6 112 331 104 287 7.37e-11 63.5
Msa0446020 AT5G01340.1 26.282 312 199 7 13 319 2 287 3.19e-22 95.9
Msa0446020 AT4G01100.1 22.941 340 193 9 24 329 38 342 3.44e-22 96.7
Msa0446020 AT4G01100.1 25.714 245 159 4 96 338 12 235 3.70e-13 70.1
Msa0446020 AT5G66380.1 26.923 312 193 8 25 325 7 294 6.16e-22 95.1
Msa0446020 AT2G37890.1 25.672 335 196 11 10 329 34 330 7.30e-22 95.5
Msa0446020 AT4G01100.2 23.276 348 196 9 24 329 38 356 1.98e-21 94.7
Msa0446020 AT4G26180.1 25.526 333 219 10 26 352 19 328 3.28e-21 93.6
Msa0446020 AT5G48970.2 27.857 280 160 7 67 326 1 258 3.60e-21 92.0
Msa0446020 AT2G33820.1 23.676 321 198 7 22 326 12 301 1.41e-20 91.3
Msa0446020 AT4G01100.3 23.125 320 177 9 44 329 8 292 2.95e-20 90.1
Msa0446020 AT4G01100.3 29.814 161 110 2 180 338 26 185 7.90e-13 68.9
Msa0446020 AT3G55640.1 24.058 345 218 9 7 337 17 331 2.99e-20 90.9
Msa0446020 AT3G55640.1 26.446 242 160 5 103 344 16 239 1.08e-14 74.7
Msa0446020 AT3G55640.4 24.058 345 218 9 7 337 17 331 2.99e-20 90.9
Msa0446020 AT3G55640.4 26.446 242 160 5 103 344 16 239 1.08e-14 74.7
Msa0446020 AT4G26180.2 26.923 286 182 9 26 305 19 283 2.08e-19 87.8
Msa0446020 AT4G26180.2 31.765 170 88 7 182 336 56 212 8.39e-13 68.6
Msa0446020 AT5G51050.1 25.796 314 184 11 28 332 223 496 2.36e-19 89.7
Msa0446020 AT1G14560.1 26.531 294 188 6 44 328 43 317 3.63e-19 87.8
Msa0446020 AT1G14560.1 26.066 211 129 4 27 225 122 317 2.25e-13 70.9
Msa0446020 AT5G07320.1 26.102 295 168 10 44 331 225 476 4.20e-19 88.6
Msa0446020 AT5G61810.2 22.727 330 210 7 6 331 44 332 2.05e-18 85.5
Msa0446020 AT5G15640.1 26.207 290 158 9 42 309 42 297 2.16e-18 85.1
Msa0446020 AT5G15640.2 26.207 290 158 9 42 309 35 290 4.06e-18 84.3
Msa0446020 AT5G61810.1 23.052 308 193 6 28 331 208 475 5.92e-18 85.5
Msa0446020 AT1G14560.2 27.306 271 169 6 44 305 43 294 6.72e-18 83.6
Msa0446020 AT1G14560.2 26.596 188 111 4 27 202 122 294 1.99e-11 64.7
Msa0446020 AT2G33820.3 23.100 329 198 8 22 326 12 309 7.65e-18 83.6
Msa0446020 AT3G54110.1 23.585 318 202 8 26 333 13 299 9.85e-18 83.2
Msa0446020 AT2G39970.1 25.649 308 197 9 41 327 21 317 2.17e-16 79.7
Msa0446020 AT1G79900.1 28.231 294 170 8 43 333 31 286 3.29e-16 78.6
Msa0446020 AT1G72820.1 25.496 353 217 10 2 329 5 336 6.53e-16 78.6
Msa0446020 AT1G72820.2 25.496 353 217 10 2 329 5 336 6.53e-16 78.6
Msa0446020 AT3G20240.1 27.329 322 174 9 26 325 50 333 9.09e-16 77.8
Msa0446020 AT4G03115.1 24.465 327 195 10 12 328 22 306 1.07e-15 77.4
Msa0446020 AT4G03115.3 24.465 327 195 10 12 328 54 338 1.13e-15 77.8
Msa0446020 AT5G01500.1 21.338 314 198 8 44 352 135 404 2.62e-15 77.0
Msa0446020 AT3G55640.2 26.033 242 161 4 103 344 16 239 2.71e-15 75.5
Msa0446020 AT3G55640.3 26.033 242 161 4 103 344 16 239 2.71e-15 75.5
Msa0446020 AT3G51870.1 22.259 301 190 7 34 329 97 358 1.56e-14 74.7
Msa0446020 AT5G58970.1 22.082 317 201 7 28 329 16 301 5.71e-14 72.0
Msa0446020 AT1G14560.3 25.943 212 130 4 27 226 24 220 6.15e-14 70.9
Msa0446020 AT1G14560.3 26.293 232 146 4 106 328 4 219 2.70e-13 69.3
Msa0446020 AT3G53940.2 26.829 246 139 7 107 337 48 267 1.68e-13 70.5
Msa0446020 AT3G53940.2 27.132 258 144 10 16 261 61 286 6.45e-12 65.9
Msa0446020 AT1G14140.1 23.448 290 187 7 27 308 15 277 2.74e-13 70.1
Msa0446020 AT2G33820.4 24.272 206 138 5 22 225 12 201 8.04e-13 68.6
Msa0446020 AT4G03115.5 23.963 217 136 4 14 226 45 236 1.01e-12 67.8
Msa0446020 AT4G03115.6 23.963 217 136 4 14 226 53 244 1.82e-12 67.0
Msa0446020 AT5G56450.1 26.087 207 127 7 28 231 145 328 2.07e-12 67.8
Msa0446020 AT5G26200.1 25.312 320 202 11 26 329 37 335 3.34e-12 67.4
Msa0446020 AT5G64970.1 22.727 308 200 8 34 328 137 419 4.68e-12 67.4
Msa0446020 AT5G64970.2 22.476 307 200 8 35 328 14 295 5.57e-12 66.2
Msa0446020 AT5G09470.1 26.255 259 159 7 74 328 99 329 7.49e-12 66.2
Msa0446020 AT5G58970.2 25.000 220 130 6 126 330 16 215 6.79e-11 62.8

Find 115 sgRNAs with CRISPR-Local

Find 345 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAAGCAAATTCTTGTAGTTT+AGG 0.174028 3_3:-21172296 None:intergenic
GGAGCTGTTGCGGGTGCTTT+TGG 0.179774 3_3:+21174469 Msa0446020:CDS
CCATCTGCAATATGCCTTTC+TGG 0.185244 3_3:-21174713 None:intergenic
TTCCTTTGAGGGCCTGGTTT+TGG 0.189025 3_3:+21176556 Msa0446020:CDS
ACCAAGTTTGACTTAGTTAA+AGG 0.190040 3_3:-21177421 None:intergenic
AAGCAAATTCTTGTAGTTTA+GGG 0.244065 3_3:-21172295 None:intergenic
GAATTATTAACGTGCCAATT+TGG 0.247306 3_3:-21176536 None:intergenic
GGCTTCAGCGCTTACCTTCA+TGG 0.250292 3_3:+21177159 Msa0446020:CDS
CAAAACTAGGCTGCAAGTTC+AGG 0.252977 3_3:+21176714 Msa0446020:CDS
GAAATATATGATTATTATAA+AGG 0.257154 3_3:+21175785 Msa0446020:CDS
ATGCAGAACACAGGGTTTAA+AGG 0.259624 3_3:+21175832 Msa0446020:CDS
GCGACTGGTGCAACATATTT+TGG 0.263682 3_3:+21175117 Msa0446020:CDS
GGTGTAGTACCTGGTGTTAC+TGG 0.266882 3_3:+21175087 Msa0446020:CDS
AGTTATTGGAGAATATTATT+TGG 0.279272 3_3:+21177618 Msa0446020:three_prime_UTR
AAGGCGTTAAGGGGATGTTT+AGG 0.289836 3_3:+21177104 Msa0446020:CDS
TGGATGCAATTTACAACATA+TGG 0.297888 3_3:+21177074 Msa0446020:CDS
CAAAGTCAAGCTATTCTAAA+TGG 0.302898 3_3:+21174535 Msa0446020:CDS
ATCCTAGCCTTGGTGGCCAC+TGG 0.304355 3_3:+21175178 Msa0446020:CDS
TCTTCACATTATAGCCTCTA+TGG 0.316785 3_3:+21177503 Msa0446020:three_prime_UTR
GTTCGGAGCTTGTGGTTTAC+TGG 0.321030 3_3:-21172366 None:intergenic
AGGCGTTAAGGGGATGTTTA+GGG 0.324139 3_3:+21177105 Msa0446020:CDS
AGCTTGTGGTTTACTGGAAA+TGG 0.332068 3_3:-21172360 None:intergenic
GATGGATATCTAATCCAAAT+TGG 0.340977 3_3:+21176522 Msa0446020:CDS
CACTGGGCACATTTCATTGC+TGG 0.343281 3_3:+21175195 Msa0446020:CDS
TTTGTATGGGGAGCTGTTGC+GGG 0.362454 3_3:+21174460 Msa0446020:CDS
AAGTATGGAGGGAGTTTGTA+TGG 0.370405 3_3:+21174446 Msa0446020:intron
GGTAGAAAATAAGAAATCTT+TGG 0.371336 3_3:+21177255 Msa0446020:CDS
TGCAGAACACAGGGTTTAAA+GGG 0.376283 3_3:+21175833 Msa0446020:CDS
ATGGGCTAAGGAAGGCGTTA+AGG 0.383119 3_3:+21177093 Msa0446020:CDS
TCTATTGTATTTAGGTATGA+TGG 0.384108 3_3:+21177046 Msa0446020:intron
CACGTTAATAATTCCTTTGA+GGG 0.388766 3_3:+21176545 Msa0446020:CDS
GCAAGGGATGTACCATTTGC+TGG 0.397105 3_3:+21176335 Msa0446020:CDS
CGGTCTGTCTGGAAGGTTGA+TGG 0.398866 3_3:+21174738 Msa0446020:CDS
TGCATATCTCACCACTCCTT+TGG 0.414329 3_3:+21176684 Msa0446020:CDS
TGCAGATGGTGCGGTCTGTC+TGG 0.418211 3_3:+21174727 Msa0446020:CDS
TCCTAGCCTTGGTGGCCACT+GGG 0.420808 3_3:+21175179 Msa0446020:CDS
GGTTTAAAGGGTTTATATGC+AGG 0.422881 3_3:+21175845 Msa0446020:CDS
TTGAAAGATGCTACAGAGTA+CGG 0.432563 3_3:+21176491 Msa0446020:CDS
CTTGATCAATCATTCATCAA+TGG 0.433132 3_3:+21172325 Msa0446020:exon
AAGTTCAGGGTTCAACTTTG+AGG 0.434100 3_3:+21176728 Msa0446020:CDS
AGCTATTCTAAATGGTGTTA+AGG 0.436394 3_3:+21174543 Msa0446020:CDS
TGGGCTAAGGAAGGCGTTAA+GGG 0.437474 3_3:+21177094 Msa0446020:CDS
TAATAATTCCTTTGAGGGCC+TGG 0.437731 3_3:+21176550 Msa0446020:CDS
TAACTAAGTCAAACTTGGTC+TGG 0.439083 3_3:+21177425 Msa0446020:three_prime_UTR
GAGAATTGCGTGGTACATTC+CGG 0.443486 3_3:+21177138 Msa0446020:CDS
AAATATATGATTATTATAAA+GGG 0.444285 3_3:+21175786 Msa0446020:CDS
GTTTGTATGGGGAGCTGTTG+CGG 0.447613 3_3:+21174459 Msa0446020:CDS
CAGAGTACGGGAAGCGAAGA+TGG 0.449993 3_3:+21176504 Msa0446020:CDS
CATTTCATTGCTGGAGCTGT+TGG 0.450661 3_3:+21175204 Msa0446020:CDS
CGCTGCTTTATCACTTCGCA+TGG 0.451002 3_3:-21175686 None:intergenic
GCACGTTAATAATTCCTTTG+AGG 0.456007 3_3:+21176544 Msa0446020:CDS
AGCGCTTACCTTCATGGCTG+TGG 0.458535 3_3:+21177165 Msa0446020:CDS
AAGCAGCGCATGCAAGTTCA+AGG 0.461159 3_3:+21175701 Msa0446020:CDS
GGAATGTACCACGCAATTCT+CGG 0.466750 3_3:-21177136 None:intergenic
AACATTGATCGAACCACCAT+TGG 0.469379 3_3:-21177221 None:intergenic
CTTTGGACGTCGTCAAAACT+AGG 0.479684 3_3:+21176701 Msa0446020:CDS
ACCTTTAACTAAGTCAAACT+TGG 0.481020 3_3:+21177420 Msa0446020:three_prime_UTR
TGGAAGGTTGATGGATTAAG+AGG 0.483974 3_3:+21174747 Msa0446020:CDS
GAATGTACCACGCAATTCTC+GGG 0.494354 3_3:-21177135 None:intergenic
GGATGCAATTTACAACATAT+GGG 0.498562 3_3:+21177075 Msa0446020:CDS
TGCATATTGAGCTGCCTGCA+TGG 0.498693 3_3:-21175814 None:intergenic
CTTCATTGCAGTAGAACTCC+AGG 0.501088 3_3:-21175735 None:intergenic
GAGAAATTCCACAGCCATGA+AGG 0.502862 3_3:-21177173 None:intergenic
AATAATATTCTCCAATAACT+TGG 0.507864 3_3:-21177615 None:intergenic
AAAACTAGGCTGCAAGTTCA+GGG 0.510587 3_3:+21176715 Msa0446020:CDS
TAATCATATATTTCTGCACC+AGG 0.515860 3_3:-21175776 None:intergenic
AGTATGGAGGGAGTTTGTAT+GGG 0.522756 3_3:+21174447 Msa0446020:intron
GAGGATTCACATCCTAGCCT+TGG 0.526709 3_3:+21175168 Msa0446020:CDS
TGGGGAAGGAATGATGCATC+CGG 0.530320 3_3:+21174489 Msa0446020:CDS
ATTTAGGTATGATGGTTGGT+TGG 0.530344 3_3:+21177054 Msa0446020:intron
AATACCATCAGGCCAGCAAA+TGG 0.532808 3_3:-21176347 None:intergenic
CAGCTAATCCTCCCAAAACC+AGG 0.537567 3_3:-21176568 None:intergenic
TGTACCATTTGCTGGCCTGA+TGG 0.545241 3_3:+21176343 Msa0446020:CDS
ATTATGATATTGAAGTATGG+AGG 0.546460 3_3:+21174434 Msa0446020:intron
AGAAAATAAGAAATCTTTGG+AGG 0.546835 3_3:+21177258 Msa0446020:CDS
GAAACGTTGTTCGGAGCTTG+TGG 0.547396 3_3:-21172374 None:intergenic
GTTTAAAGGGTTTATATGCA+GGG 0.548432 3_3:+21175846 Msa0446020:CDS
TGATCGTGAGAAACGTTGTT+CGG 0.550766 3_3:-21172383 None:intergenic
AGTTCTACTGCAATGAAGAA+TGG 0.554759 3_3:+21175740 Msa0446020:CDS
GTTACTGGCTCTCTTGCGAC+TGG 0.554875 3_3:+21175102 Msa0446020:CDS
TCCCAAAACCAGGCCCTCAA+AGG 0.560158 3_3:-21176558 None:intergenic
ACATTGATCGAACCACCATT+GGG 0.560504 3_3:-21177220 None:intergenic
CTACAGATATTTGTCTACAC+TGG 0.566858 3_3:+21176313 Msa0446020:intron
ATGAAGGTAAGCGCTGAAGC+CGG 0.569322 3_3:-21177157 None:intergenic
AGGAGGCTAGTTAAAAGTTG+TGG 0.569974 3_3:+21177278 Msa0446020:exon
GATTCACATCCTAGCCTTGG+TGG 0.573120 3_3:+21175171 Msa0446020:CDS
TTCAAGGCACAATTACATCC+TGG 0.574829 3_3:+21175717 Msa0446020:CDS
TGAAAGATGCTACAGAGTAC+GGG 0.575711 3_3:+21176492 Msa0446020:CDS
CAGCTCAATATGCAGAACAC+AGG 0.577068 3_3:+21175823 Msa0446020:CDS
AAATAAGAAATCTTTGGAGG+AGG 0.577333 3_3:+21177261 Msa0446020:CDS
TTGTATTTAGGTATGATGGT+TGG 0.579432 3_3:+21177050 Msa0446020:intron
TATAAAGGGATGTTCCATGC+AGG 0.579831 3_3:+21175800 Msa0446020:CDS
GCCCAGTGGCCACCAAGGCT+AGG 0.587248 3_3:-21175180 None:intergenic
ATTTGTCTGTAGAACCAGAA+AGG 0.587505 3_3:+21174699 Msa0446020:intron
CCAGAAAGGCATATTGCAGA+TGG 0.592867 3_3:+21174713 Msa0446020:CDS
GATGGTGCGGTCTGTCTGGA+AGG 0.593657 3_3:+21174731 Msa0446020:CDS
GATCAATGTTGCTAGAGTAT+CGG 0.596215 3_3:+21177234 Msa0446020:CDS
GATATTTGTCTACACTGGCA+AGG 0.597256 3_3:+21176318 Msa0446020:intron
GCAAGAGAGCCAGTAACACC+AGG 0.599638 3_3:-21175096 None:intergenic
AATGAAAGAGTGCCCAATGG+TGG 0.602193 3_3:+21177208 Msa0446020:CDS
AATTTACAACATATGGGCTA+AGG 0.602788 3_3:+21177081 Msa0446020:CDS
TTATGATATTGAAGTATGGA+GGG 0.606052 3_3:+21174435 Msa0446020:intron
GGGCTAAGGAAGGCGTTAAG+GGG 0.606222 3_3:+21177095 Msa0446020:CDS
ATATTTGTCTACACTGGCAA+GGG 0.612528 3_3:+21176319 Msa0446020:CDS
TACAACATATGGGCTAAGGA+AGG 0.614956 3_3:+21177085 Msa0446020:CDS
AATGGCATTGCAATAAAACC+TGG 0.616472 3_3:+21175758 Msa0446020:CDS
TTTGACGACGTCCAAAGGAG+TGG 0.622510 3_3:-21176695 None:intergenic
AGCTCAATATGCAGAACACA+GGG 0.628284 3_3:+21175824 Msa0446020:CDS
GTATGGAGGGAGTTTGTATG+GGG 0.630655 3_3:+21174448 Msa0446020:intron
TTTAATGAAAGAGTGCCCAA+TGG 0.649086 3_3:+21177205 Msa0446020:CDS
AATGTGCCCAGTGGCCACCA+AGG 0.650741 3_3:-21175185 None:intergenic
GGCGTTAAGGGGATGTTTAG+GGG 0.651543 3_3:+21177106 Msa0446020:CDS
AAGGCATATTGCAGATGGTG+CGG 0.663444 3_3:+21174718 Msa0446020:CDS
GTAGCGTCCCGAGAATTGCG+TGG 0.697563 3_3:+21177128 Msa0446020:CDS
CAGCAATGAAATGTGCCCAG+TGG 0.728322 3_3:-21175194 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTATGAATTTAAAAGATA+TGG + chr3_3:21172737-21172756 Msa0446020:intron 10.0%
!! AAAATATAAGCAAAAAAATA+AGG - chr3_3:21175634-21175653 None:intergenic 10.0%
!! GAAATATATGATTATTATAA+AGG + chr3_3:21175785-21175804 Msa0446020:CDS 10.0%
!! AATAGAAAAATTGTGTTTAA+TGG - chr3_3:21173108-21173127 None:intergenic 15.0%
!!! ATTTTTCTATTATGATTTGA+TGG + chr3_3:21173117-21173136 Msa0446020:intron 15.0%
!!! AACATAAAAGTTAAGTTTTA+TGG - chr3_3:21173464-21173483 None:intergenic 15.0%
!! ACAATATATAATTAATCACA+AGG - chr3_3:21175052-21175071 None:intergenic 15.0%
!! TGATTAATTATATATTGTTC+AGG + chr3_3:21175054-21175073 Msa0446020:intron 15.0%
!! ACTTATTTGCAAAAATAAAT+GGG - chr3_3:21175412-21175431 None:intergenic 15.0%
!! AACTTATTTGCAAAAATAAA+TGG - chr3_3:21175413-21175432 None:intergenic 15.0%
!!! ATTTTTTTGCTTATATTTTC+AGG + chr3_3:21175635-21175654 Msa0446020:intron 15.0%
!! ATTAAATTAAATGAGAAAGA+GGG - chr3_3:21175941-21175960 None:intergenic 15.0%
!! TATTAAATTAAATGAGAAAG+AGG - chr3_3:21175942-21175961 None:intergenic 15.0%
!!! ATAATTTTCTTATTACATCA+TGG - chr3_3:21177394-21177413 None:intergenic 15.0%
!!! TTGTTATTATTTGAAATCGA+AGG + chr3_3:21172507-21172526 Msa0446020:intron 20.0%
!! TTGCAAACTAAGATTAATTA+TGG + chr3_3:21172566-21172585 Msa0446020:intron 20.0%
!!! ATTTAATTTTCCTAATCTTG+TGG + chr3_3:21172621-21172640 Msa0446020:intron 20.0%
!!! TTTAATTTTCCTAATCTTGT+GGG + chr3_3:21172622-21172641 Msa0446020:intron 20.0%
!! AAGTAGTTAAGAATTCTAAT+TGG + chr3_3:21173513-21173532 Msa0446020:intron 20.0%
!!! TCAACTTTTATATTACAATC+TGG + chr3_3:21173977-21173996 Msa0446020:intron 20.0%
!! GTGTGACAAAAAATTATTAA+AGG - chr3_3:21174103-21174122 None:intergenic 20.0%
!!! TTTGTTTTCTAGTAATAATG+AGG - chr3_3:21174358-21174377 None:intergenic 20.0%
!! ATTGAAGAAAGACAAAATAA+TGG - chr3_3:21174390-21174409 None:intergenic 20.0%
!! TGTATTATGATATTGAAGTA+TGG + chr3_3:21174431-21174450 Msa0446020:intron 20.0%
!! TTTAATATTTGTCCCAAATA+TGG + chr3_3:21174786-21174805 Msa0446020:intron 20.0%
!! TTAATATTTGTCCCAAATAT+GGG + chr3_3:21174787-21174806 Msa0446020:intron 20.0%
!! AAATCAAAATACCCATATTT+GGG - chr3_3:21174801-21174820 None:intergenic 20.0%
!! AAAATCAAAATACCCATATT+TGG - chr3_3:21174802-21174821 None:intergenic 20.0%
!!! TTGTTTAAGAAAAGAGTTTT+TGG + chr3_3:21174887-21174906 Msa0446020:intron 20.0%
!!! TAATTGAAGTATTCCATTTA+TGG + chr3_3:21175452-21175471 Msa0446020:intron 20.0%
!!! AATTTTAAAAGCACATCATT+AGG + chr3_3:21175963-21175982 Msa0446020:intron 20.0%
!! ACTTAAGTACATATTATCAA+AGG - chr3_3:21176614-21176633 None:intergenic 20.0%
!! AATCATTGAAGAAAATTAAG+TGG - chr3_3:21176822-21176841 None:intergenic 20.0%
!!! ATTATGCAAAATTGATTTTC+TGG + chr3_3:21176875-21176894 Msa0446020:intron 20.0%
!!! GGAATTATCAATTTAAGATA+AGG - chr3_3:21176951-21176970 None:intergenic 20.0%
!!! TTAAATTGATAATTCCGAAA+AGG + chr3_3:21176955-21176974 Msa0446020:intron 20.0%
!!! TAAATTGATAATTCCGAAAA+GGG + chr3_3:21176956-21176975 Msa0446020:intron 20.0%
!! TTGCTTTATCTATTGTATTT+AGG + chr3_3:21177038-21177057 Msa0446020:intron 20.0%
!! ATCTTTGTAAAAATCAAGAT+GGG - chr3_3:21177320-21177339 None:intergenic 20.0%
!!! ATCTTGATTTTTACAAAGAT+GGG + chr3_3:21177320-21177339 Msa0446020:three_prime_UTR 20.0%
!! AATAATATTCTCCAATAACT+TGG - chr3_3:21177618-21177637 None:intergenic 20.0%
! AAGCAAATTCTTGTAGTTTA+GGG - chr3_3:21172298-21172317 None:intergenic 25.0%
! AAAGCAAATTCTTGTAGTTT+AGG - chr3_3:21172299-21172318 None:intergenic 25.0%
! TTGCAAATTTCTTCAAACAT+TGG - chr3_3:21172552-21172571 None:intergenic 25.0%
! TCAAAAATGCAGGTAAATTT+GGG - chr3_3:21173004-21173023 None:intergenic 25.0%
! TTCAAAAATGCAGGTAAATT+TGG - chr3_3:21173005-21173024 None:intergenic 25.0%
! TTCTATTATGATTTGATGGA+AGG + chr3_3:21173121-21173140 Msa0446020:intron 25.0%
!! TTCAAATTTTTATGAGTGTC+CGG + chr3_3:21173216-21173235 Msa0446020:intron 25.0%
! GAAAAATATAGGCTTCTTAT+TGG + chr3_3:21173400-21173419 Msa0446020:intron 25.0%
! TATGTTACACTCTGATTATT+TGG + chr3_3:21173478-21173497 Msa0446020:intron 25.0%
! ATGTTACACTCTGATTATTT+GGG + chr3_3:21173479-21173498 Msa0446020:intron 25.0%
!!! TGATTATTTGGGTTTTTGTT+CGG + chr3_3:21173490-21173509 Msa0446020:intron 25.0%
!! TGAACTTTTGTATGATTTGA+AGG + chr3_3:21173722-21173741 Msa0446020:intron 25.0%
! ATACAACAATTTCTAAATGC+AGG - chr3_3:21173829-21173848 None:intergenic 25.0%
! CATTTAGAAATTGTTGTATG+AGG + chr3_3:21173830-21173849 Msa0446020:intron 25.0%
! TTACAACCTTACAAGTAATT+TGG + chr3_3:21174076-21174095 Msa0446020:intron 25.0%
! TACAACCTTACAAGTAATTT+GGG + chr3_3:21174077-21174096 Msa0446020:intron 25.0%
! ATTATGATATTGAAGTATGG+AGG + chr3_3:21174434-21174453 Msa0446020:intron 25.0%
! TTATGATATTGAAGTATGGA+GGG + chr3_3:21174435-21174454 Msa0446020:intron 25.0%
! TCACAGTCTAATTTATCTAT+AGG - chr3_3:21174580-21174599 None:intergenic 25.0%
! AATACTTCAATTACTTACTG+AGG - chr3_3:21175445-21175464 None:intergenic 25.0%
! TCATGATAATCAATCATTGT+TGG - chr3_3:21175479-21175498 None:intergenic 25.0%
! AATAAACCTTCAAATTTGCA+CGG - chr3_3:21175555-21175574 None:intergenic 25.0%
!! GCTTTTTATTCACAATCAAA+CGG - chr3_3:21175602-21175621 None:intergenic 25.0%
!! TTATGATAACGACAACTTAT+TGG - chr3_3:21176010-21176029 None:intergenic 25.0%
! AACTGGTTATATAAGTCAAT+TGG - chr3_3:21176156-21176175 None:intergenic 25.0%
! ATAGTATCACATAATTCAAC+TGG - chr3_3:21176173-21176192 None:intergenic 25.0%
! AGTTGAATTATGTGATACTA+TGG + chr3_3:21176172-21176191 Msa0446020:intron 25.0%
!! AAGCTCTAACTTATCTAAAT+TGG - chr3_3:21176201-21176220 None:intergenic 25.0%
! ATTTGTAGACAAATATCATC+AGG - chr3_3:21176402-21176421 None:intergenic 25.0%
!! TTTTGCTCAAATAATTGAAC+AGG + chr3_3:21176655-21176674 Msa0446020:intron 25.0%
! ATAACATGTTAGAATACGTA+TGG - chr3_3:21176767-21176786 None:intergenic 25.0%
!! TTTCTTCAATGATTGTTGTT+TGG + chr3_3:21176828-21176847 Msa0446020:intron 25.0%
!!! ATTGATTTTCTGGTGTATTA+TGG + chr3_3:21176885-21176904 Msa0446020:intron 25.0%
!!! GATGTTTTTTGCATTTTGAT+TGG + chr3_3:21176978-21176997 Msa0446020:intron 25.0%
!!! TTTGATTGGTCATGTTTTTA+TGG + chr3_3:21176992-21177011 Msa0446020:intron 25.0%
! TCTATTGTATTTAGGTATGA+TGG + chr3_3:21177046-21177065 Msa0446020:intron 25.0%
! GGTAGAAAATAAGAAATCTT+TGG + chr3_3:21177255-21177274 Msa0446020:CDS 25.0%
! AGAAAATAAGAAATCTTTGG+AGG + chr3_3:21177258-21177277 Msa0446020:CDS 25.0%
! CATCTTTGTAAAAATCAAGA+TGG - chr3_3:21177321-21177340 None:intergenic 25.0%
!! CATCTTGATTTTTACAAAGA+TGG + chr3_3:21177319-21177338 Msa0446020:three_prime_UTR 25.0%
! TAAACTGAACGATCAAAAAT+GGG - chr3_3:21177451-21177470 None:intergenic 25.0%
! TTAAACTGAACGATCAAAAA+TGG - chr3_3:21177452-21177471 None:intergenic 25.0%
CTTGATCAATCATTCATCAA+TGG + chr3_3:21172325-21172344 Msa0446020:exon 30.0%
!!! GTTTCTCACGATCATTTTTT+CGG + chr3_3:21172392-21172411 Msa0446020:CDS 30.0%
GTAATCACATATGTTTGTGT+CGG - chr3_3:21172820-21172839 None:intergenic 30.0%
!!! ACCTGCATTTTTGAAATTGA+TGG + chr3_3:21173010-21173029 Msa0446020:intron 30.0%
TCCATCAATTTCAAAAATGC+AGG - chr3_3:21173014-21173033 None:intergenic 30.0%
AAGTAAACTAACATCCAACA+AGG - chr3_3:21173057-21173076 None:intergenic 30.0%
!!! TACCTGCATTTTGAAATTGA+TGG + chr3_3:21173368-21173387 Msa0446020:intron 30.0%
TACCATCAATTTCAAAATGC+AGG - chr3_3:21173373-21173392 None:intergenic 30.0%
! TTGAAATTGATGGTATGACA+TGG + chr3_3:21173378-21173397 Msa0446020:intron 30.0%
GGTATGACATGGAAAAATAT+AGG + chr3_3:21173389-21173408 Msa0446020:intron 30.0%
ACTAGAAAGTTTCTTGATTG+AGG + chr3_3:21173636-21173655 Msa0446020:intron 30.0%
GTTCTTATGTGGCATAAAAT+TGG - chr3_3:21173663-21173682 None:intergenic 30.0%
! TTTTATGCCACATAAGAACA+TGG + chr3_3:21173664-21173683 Msa0446020:intron 30.0%
TCATGTTTCAACATAATCCT+GGG - chr3_3:21173705-21173724 None:intergenic 30.0%
TTCATGTTTCAACATAATCC+TGG - chr3_3:21173706-21173725 None:intergenic 30.0%
CTAAATGCAGGTACAAAAAT+GGG - chr3_3:21173817-21173836 None:intergenic 30.0%
TCTAAATGCAGGTACAAAAA+TGG - chr3_3:21173818-21173837 None:intergenic 30.0%
TTAGAAATTGTTGTATGAGG+TGG + chr3_3:21173833-21173852 Msa0446020:intron 30.0%
TGTATGAGGTGGAAAATAAA+AGG + chr3_3:21173844-21173863 Msa0446020:intron 30.0%
! ATTTTGCATTTTGAACAGCA+TGG + chr3_3:21173890-21173909 Msa0446020:intron 30.0%
TGAACAGCATGGAAAAATAA+AGG + chr3_3:21173901-21173920 Msa0446020:intron 30.0%
TATATTACAATCTGGTTACC+AGG + chr3_3:21173985-21174004 Msa0446020:intron 30.0%
ATATTACAATCTGGTTACCA+GGG + chr3_3:21173986-21174005 Msa0446020:intron 30.0%
GTTTAAAAAATTGCTCTCTG+AGG + chr3_3:21174041-21174060 Msa0446020:intron 30.0%
ATTACTTGTAAGGTTGTAAC+TGG - chr3_3:21174075-21174094 None:intergenic 30.0%
! CTGATTTTGCAAAACCAATA+CGG - chr3_3:21174298-21174317 None:intergenic 30.0%
TAGTAATAATGAGGCTTAGT+AGG - chr3_3:21174349-21174368 None:intergenic 30.0%
!! ACTTTGTATTCGTGTTTTGA+TGG - chr3_3:21174521-21174540 None:intergenic 30.0%
CAAAGTCAAGCTATTCTAAA+TGG + chr3_3:21174535-21174554 Msa0446020:CDS 30.0%
! AGCTATTCTAAATGGTGTTA+AGG + chr3_3:21174543-21174562 Msa0446020:CDS 30.0%
! TAAAGCTTCTCTCTTTTGTT+GGG + chr3_3:21174670-21174689 Msa0446020:intron 30.0%
!! CCAAATGTGATTTTAACATG+AGG - chr3_3:21174836-21174855 None:intergenic 30.0%
CCTCATGTTAAAATCACATT+TGG + chr3_3:21174833-21174852 Msa0446020:intron 30.0%
! CATCATTTTACCCTCAAAAT+AGG - chr3_3:21174920-21174939 None:intergenic 30.0%
! CATGTATATAAAAGCATGCT+TGG - chr3_3:21174947-21174966 None:intergenic 30.0%
! TGATCTTGTTATGTAGACTT+TGG + chr3_3:21175004-21175023 Msa0446020:intron 30.0%
! TATATTGTTCAGGCTTTTAC+AGG + chr3_3:21175064-21175083 Msa0446020:intron 30.0%
! ATATTGTTCAGGCTTTTACA+GGG + chr3_3:21175065-21175084 Msa0446020:intron 30.0%
TCATAGAGTCAACTAAAAAG+TGG + chr3_3:21175142-21175161 Msa0446020:CDS 30.0%
AATCATTGTTGGTCCATAAA+TGG - chr3_3:21175468-21175487 None:intergenic 30.0%
! TTTTATCCGTGCAAATTTGA+AGG + chr3_3:21175546-21175565 Msa0446020:intron 30.0%
!! ATATTTTCAGGAGATACACT+TGG + chr3_3:21175647-21175666 Msa0446020:intron 30.0%
!! TATTTTCAGGAGATACACTT+GGG + chr3_3:21175648-21175667 Msa0446020:intron 30.0%
! TAATCATATATTTCTGCACC+AGG - chr3_3:21175779-21175798 None:intergenic 30.0%
GTTTAAAGGGTTTATATGCA+GGG + chr3_3:21175846-21175865 Msa0446020:CDS 30.0%
TAGGCAATAAATAGTACCTT+AGG + chr3_3:21175982-21176001 Msa0446020:intron 30.0%
ATGTACCATGCAATTGTTAT+AGG + chr3_3:21176451-21176470 Msa0446020:intron 30.0%
GATGGATATCTAATCCAAAT+TGG + chr3_3:21176522-21176541 Msa0446020:CDS 30.0%
GAATTATTAACGTGCCAATT+TGG - chr3_3:21176539-21176558 None:intergenic 30.0%
CACGTTAATAATTCCTTTGA+GGG + chr3_3:21176545-21176564 Msa0446020:CDS 30.0%
AAATTAAGTGGTATCCTGAT+GGG - chr3_3:21176810-21176829 None:intergenic 30.0%
AAAATTAAGTGGTATCCTGA+TGG - chr3_3:21176811-21176830 None:intergenic 30.0%
! ATGCAAAAAACATCCCTTTT+CGG - chr3_3:21176972-21176991 None:intergenic 30.0%
TTGTATTTAGGTATGATGGT+TGG + chr3_3:21177050-21177069 Msa0446020:intron 30.0%
TGGATGCAATTTACAACATA+TGG + chr3_3:21177074-21177093 Msa0446020:CDS 30.0%
GGATGCAATTTACAACATAT+GGG + chr3_3:21177075-21177094 Msa0446020:CDS 30.0%
! AATTTACAACATATGGGCTA+AGG + chr3_3:21177081-21177100 Msa0446020:CDS 30.0%
! AAATAAGAAATCTTTGGAGG+AGG + chr3_3:21177261-21177280 Msa0446020:CDS 30.0%
ACCTTTAACTAAGTCAAACT+TGG + chr3_3:21177420-21177439 Msa0446020:three_prime_UTR 30.0%
! ACCAAGTTTGACTTAGTTAA+AGG - chr3_3:21177424-21177443 None:intergenic 30.0%
! ATATTTTCACGCCAAGTTAT+TGG + chr3_3:21177604-21177623 Msa0446020:three_prime_UTR 30.0%
TCTTAACAACCCACAAGATT+AGG - chr3_3:21172634-21172653 None:intergenic 35.0%
! TGTAACACCAACACTTTTGA+TGG + chr3_3:21172768-21172787 Msa0446020:intron 35.0%
! AAACCTTCCATCAAAAGTGT+TGG - chr3_3:21172778-21172797 None:intergenic 35.0%
! CTTCCAATTTTTACCTGTGT+TGG + chr3_3:21172864-21172883 Msa0446020:intron 35.0%
ACACCAACACAGGTAAAAAT+TGG - chr3_3:21172870-21172889 None:intergenic 35.0%
GCGAAATTGTGGATACTTAT+TGG - chr3_3:21173332-21173351 None:intergenic 35.0%
TCAAAATGCAGGTACAGAAA+CGG - chr3_3:21173362-21173381 None:intergenic 35.0%
! GTTTTATGGTCAAACACTGT+CGG - chr3_3:21173450-21173469 None:intergenic 35.0%
! GTTGCGATTTTATGTCTAGA+TGG + chr3_3:21173599-21173618 Msa0446020:intron 35.0%
AAAATAAAGGCCTCTGATGT+CGG + chr3_3:21173914-21173933 Msa0446020:intron 35.0%
! AAAAAATTGCTCTCTGAGGA+AGG + chr3_3:21174045-21174064 Msa0446020:intron 35.0%
! AAAAATTGCTCTCTGAGGAA+GGG + chr3_3:21174046-21174065 Msa0446020:intron 35.0%
AAAGGCCCAAATTACTTGTA+AGG - chr3_3:21174085-21174104 None:intergenic 35.0%
TTGTCACACATACTATCTCT+TGG + chr3_3:21174114-21174133 Msa0446020:intron 35.0%
! CATGATAACAATGATGGGAA+GGG - chr3_3:21174188-21174207 None:intergenic 35.0%
TCCACCATGATAACAATGAT+GGG - chr3_3:21174193-21174212 None:intergenic 35.0%
ATCCACCATGATAACAATGA+TGG - chr3_3:21174194-21174213 None:intergenic 35.0%
! AAATTTTCAGCTTTCAGCCA+TGG - chr3_3:21174223-21174242 None:intergenic 35.0%
TACGGTCAATTTATGAAGGA+TGG - chr3_3:21174280-21174299 None:intergenic 35.0%
CCAATACGGTCAATTTATGA+AGG - chr3_3:21174284-21174303 None:intergenic 35.0%
CCTTCATAAATTGACCGTAT+TGG + chr3_3:21174281-21174300 Msa0446020:intron 35.0%
ATAATGAGGCTTAGTAGGTT+GGG - chr3_3:21174344-21174363 None:intergenic 35.0%
AATAATGAGGCTTAGTAGGT+TGG - chr3_3:21174345-21174364 None:intergenic 35.0%
GAGTATGCATAACAAGAACA+AGG - chr3_3:21174610-21174629 None:intergenic 35.0%
! CTAAAGCTTCTCTCTTTTGT+TGG + chr3_3:21174669-21174688 Msa0446020:intron 35.0%
ATTTGTCTGTAGAACCAGAA+AGG + chr3_3:21174699-21174718 Msa0446020:intron 35.0%
! TTGGCTGAAAACCTATTTTG+AGG + chr3_3:21174906-21174925 Msa0446020:intron 35.0%
!! TGGCTGAAAACCTATTTTGA+GGG + chr3_3:21174907-21174926 Msa0446020:intron 35.0%
! TATTGTTCAGGCTTTTACAG+GGG + chr3_3:21175066-21175085 Msa0446020:intron 35.0%
!! GTCAACTAAAAAGTGGATTG+AGG + chr3_3:21175149-21175168 Msa0446020:CDS 35.0%
AGTTCTACTGCAATGAAGAA+TGG + chr3_3:21175740-21175759 Msa0446020:CDS 35.0%
AATGGCATTGCAATAAAACC+TGG + chr3_3:21175758-21175777 Msa0446020:CDS 35.0%
GGTTTAAAGGGTTTATATGC+AGG + chr3_3:21175845-21175864 Msa0446020:CDS 35.0%
CTACAGATATTTGTCTACAC+TGG + chr3_3:21176313-21176332 Msa0446020:intron 35.0%
ATATTTGTCTACACTGGCAA+GGG + chr3_3:21176319-21176338 Msa0446020:CDS 35.0%
GTGTTGTGTATAATACCATC+AGG - chr3_3:21176361-21176380 None:intergenic 35.0%
AACACATTGAGTTACAGAAC+TGG + chr3_3:21176376-21176395 Msa0446020:intron 35.0%
CACAACCTATAACAATTGCA+TGG - chr3_3:21176459-21176478 None:intergenic 35.0%
TTGAAAGATGCTACAGAGTA+CGG + chr3_3:21176491-21176510 Msa0446020:CDS 35.0%
GCACGTTAATAATTCCTTTG+AGG + chr3_3:21176544-21176563 Msa0446020:CDS 35.0%
! TATTATCAAAGGCATAGCAC+TGG - chr3_3:21176603-21176622 None:intergenic 35.0%
!! ATTGTTGTTTGGAATACGTC+TGG + chr3_3:21176839-21176858 Msa0446020:intron 35.0%
AATACGTCTGGTGTCTTAAT+TGG + chr3_3:21176851-21176870 Msa0446020:intron 35.0%
! ATGGACTACAGCTAAATTGA+TGG + chr3_3:21177011-21177030 Msa0446020:intron 35.0%
ATTTAGGTATGATGGTTGGT+TGG + chr3_3:21177054-21177073 Msa0446020:intron 35.0%
!! TTTAATGAAAGAGTGCCCAA+TGG + chr3_3:21177205-21177224 Msa0446020:CDS 35.0%
GATCAATGTTGCTAGAGTAT+CGG + chr3_3:21177234-21177253 Msa0446020:CDS 35.0%
TAACTAAGTCAAACTTGGTC+TGG + chr3_3:21177425-21177444 Msa0446020:three_prime_UTR 35.0%
TCTTCACATTATAGCCTCTA+TGG + chr3_3:21177503-21177522 Msa0446020:three_prime_UTR 35.0%
CAGTGACTAAAAACATGTCT+GGG + chr3_3:21177526-21177545 Msa0446020:three_prime_UTR 35.0%
AGCTTGTGGTTTACTGGAAA+TGG - chr3_3:21172363-21172382 None:intergenic 40.0%
TGATCGTGAGAAACGTTGTT+CGG - chr3_3:21172386-21172405 None:intergenic 40.0%
!! CAAAAGTGTTGGTGTTACAC+AGG - chr3_3:21172767-21172786 None:intergenic 40.0%
! ACACCAACACTTTTGATGGA+AGG + chr3_3:21172772-21172791 Msa0446020:intron 40.0%
GGAATGCCATGAAGAAATAG+AGG + chr3_3:21173031-21173050 Msa0446020:intron 40.0%
! ACAAGGCCTCTATTTCTTCA+TGG - chr3_3:21173040-21173059 None:intergenic 40.0%
! TGAAGAAATAGAGGCCTTGT+TGG + chr3_3:21173040-21173059 Msa0446020:intron 40.0%
! GTAATCACATGTGTCGATGT+CGG - chr3_3:21173177-21173196 None:intergenic 40.0%
GGTGTATATCAGTCTTACAC+TGG - chr3_3:21173429-21173448 None:intergenic 40.0%
TGCCACATAAGAACATGGAA+TGG + chr3_3:21173669-21173688 Msa0446020:intron 40.0%
GCCACATAAGAACATGGAAT+GGG + chr3_3:21173670-21173689 Msa0446020:intron 40.0%
CCACATAAGAACATGGAATG+GGG + chr3_3:21173671-21173690 Msa0446020:intron 40.0%
CAGTCTTACAATGACATCAG+AGG - chr3_3:21173870-21173889 None:intergenic 40.0%
!! GTTACCAGGGTATTTTGTGT+GGG + chr3_3:21173999-21174018 Msa0446020:intron 40.0%
GGCATTATGCAATACCTATC+AGG + chr3_3:21174135-21174154 Msa0446020:intron 40.0%
CAAAAAGGACATTGCCTGAT+AGG - chr3_3:21174152-21174171 None:intergenic 40.0%
! ATCAGGCAATGTCCTTTTTG+TGG + chr3_3:21174152-21174171 Msa0446020:intron 40.0%
GGATGAATGAGACCACAAAA+AGG - chr3_3:21174167-21174186 None:intergenic 40.0%
! CCATGATAACAATGATGGGA+AGG - chr3_3:21174189-21174208 None:intergenic 40.0%
CCTTCCCATCATTGTTATCA+TGG + chr3_3:21174186-21174205 Msa0446020:intron 40.0%
TCCCATCATTGTTATCATGG+TGG + chr3_3:21174189-21174208 Msa0446020:intron 40.0%
TTGACATACCTGCCGATATA+TGG + chr3_3:21174241-21174260 Msa0446020:intron 40.0%
GGTCAATTTATGAAGGATGG+CGG - chr3_3:21174277-21174296 None:intergenic 40.0%
AAGTATGGAGGGAGTTTGTA+TGG + chr3_3:21174446-21174465 Msa0446020:intron 40.0%
AGTATGGAGGGAGTTTGTAT+GGG + chr3_3:21174447-21174466 Msa0446020:intron 40.0%
!!! CGTGTTTTGATGGTATCTAC+CGG - chr3_3:21174511-21174530 None:intergenic 40.0%
!! TGGAAGGTTGATGGATTAAG+AGG + chr3_3:21174747-21174766 Msa0446020:CDS 40.0%
TACACATTCTTGAGTCACTC+AGG + chr3_3:21175282-21175301 Msa0446020:intron 40.0%
ACACATTCTTGAGTCACTCA+GGG + chr3_3:21175283-21175302 Msa0446020:intron 40.0%
TTCAAGGCACAATTACATCC+TGG + chr3_3:21175717-21175736 Msa0446020:CDS 40.0%
TATAAAGGGATGTTCCATGC+AGG + chr3_3:21175800-21175819 Msa0446020:CDS 40.0%
AGCTCAATATGCAGAACACA+GGG + chr3_3:21175824-21175843 Msa0446020:CDS 40.0%
ATGCAGAACACAGGGTTTAA+AGG + chr3_3:21175832-21175851 Msa0446020:CDS 40.0%
TGCAGAACACAGGGTTTAAA+GGG + chr3_3:21175833-21175852 Msa0446020:CDS 40.0%
AATCCAATAGTGAACTGCTG+TGG - chr3_3:21176123-21176142 None:intergenic 40.0%
GATATTTGTCTACACTGGCA+AGG + chr3_3:21176318-21176337 Msa0446020:intron 40.0%
TGAAAGATGCTACAGAGTAC+GGG + chr3_3:21176492-21176511 Msa0446020:CDS 40.0%
! TAATAATTCCTTTGAGGGCC+TGG + chr3_3:21176550-21176569 Msa0446020:CDS 40.0%
AAAACTAGGCTGCAAGTTCA+GGG + chr3_3:21176715-21176734 Msa0446020:CDS 40.0%
AAGTTCAGGGTTCAACTTTG+AGG + chr3_3:21176728-21176747 Msa0446020:CDS 40.0%
! TACAACATATGGGCTAAGGA+AGG + chr3_3:21177085-21177104 Msa0446020:CDS 40.0%
ACATTGATCGAACCACCATT+GGG - chr3_3:21177223-21177242 None:intergenic 40.0%
AACATTGATCGAACCACCAT+TGG - chr3_3:21177224-21177243 None:intergenic 40.0%
! AGGAGGCTAGTTAAAAGTTG+TGG + chr3_3:21177278-21177297 Msa0446020:exon 40.0%
!!! GTTTTTAGTCACTGCCATAG+AGG - chr3_3:21177520-21177539 None:intergenic 40.0%
GCAGTGACTAAAAACATGTC+TGG + chr3_3:21177525-21177544 Msa0446020:three_prime_UTR 40.0%
GACTAAAAACATGTCTGGGT+AGG + chr3_3:21177530-21177549 Msa0446020:three_prime_UTR 40.0%
GTCGGACATCAGACACATAT+TGG - chr3_3:21173159-21173178 None:intergenic 45.0%
!! ATGAAGCACTGACACTGACA+TGG - chr3_3:21173264-21173283 None:intergenic 45.0%
TGTCAGTGTCAGTGCTTCAT+AGG + chr3_3:21173264-21173283 Msa0446020:intron 45.0%
CCCCATTCCATGTTCTTATG+TGG - chr3_3:21173674-21173693 None:intergenic 45.0%
CATAAGAACATGGAATGGGG+TGG + chr3_3:21173674-21173693 Msa0446020:intron 45.0%
!! GGTTACCAGGGTATTTTGTG+TGG + chr3_3:21173998-21174017 Msa0446020:intron 45.0%
ACTTCCCACACAAAATACCC+TGG - chr3_3:21174006-21174025 None:intergenic 45.0%
!! AGGGTATTTTGTGTGGGAAG+TGG + chr3_3:21174005-21174024 Msa0446020:intron 45.0%
GGAGCAGTGTTGTCAGATAT+CGG - chr3_3:21174323-21174342 None:intergenic 45.0%
GTATGGAGGGAGTTTGTATG+GGG + chr3_3:21174448-21174467 Msa0446020:intron 45.0%
CCATCTGCAATATGCCTTTC+TGG - chr3_3:21174716-21174735 None:intergenic 45.0%
! CCAGAAAGGCATATTGCAGA+TGG + chr3_3:21174713-21174732 Msa0446020:CDS 45.0%
AAGGCATATTGCAGATGGTG+CGG + chr3_3:21174718-21174737 Msa0446020:CDS 45.0%
!! TTTTACAGGGGTGTAGTACC+TGG + chr3_3:21175078-21175097 Msa0446020:CDS 45.0%
! GCGACTGGTGCAACATATTT+TGG + chr3_3:21175117-21175136 Msa0446020:CDS 45.0%
CATTTCATTGCTGGAGCTGT+TGG + chr3_3:21175204-21175223 Msa0446020:CDS 45.0%
! GAGCTGTTGGTAAGCTGATT+TGG + chr3_3:21175217-21175236 Msa0446020:intron 45.0%
CACATTCTTGAGTCACTCAG+GGG + chr3_3:21175284-21175303 Msa0446020:intron 45.0%
TACGTAATGCAATGCTGCTG+TGG + chr3_3:21175514-21175533 Msa0446020:intron 45.0%
CTTCATTGCAGTAGAACTCC+AGG - chr3_3:21175738-21175757 None:intergenic 45.0%
CAGCTCAATATGCAGAACAC+AGG + chr3_3:21175823-21175842 Msa0446020:CDS 45.0%
CGACAACTTATTGGCACCTA+AGG - chr3_3:21176001-21176020 None:intergenic 45.0%
AATACCATCAGGCCAGCAAA+TGG - chr3_3:21176350-21176369 None:intergenic 45.0%
!!! TGGTTTTGGGAGGATTAGCT+GGG + chr3_3:21176570-21176589 Msa0446020:CDS 45.0%
TGCATATCTCACCACTCCTT+TGG + chr3_3:21176684-21176703 Msa0446020:CDS 45.0%
!!! CTAGTTTTGACGACGTCCAA+AGG - chr3_3:21176703-21176722 None:intergenic 45.0%
CTTTGGACGTCGTCAAAACT+AGG + chr3_3:21176701-21176720 Msa0446020:CDS 45.0%
CAAAACTAGGCTGCAAGTTC+AGG + chr3_3:21176714-21176733 Msa0446020:CDS 45.0%
TTAAGTGGTATCCTGATGGG+AGG - chr3_3:21176807-21176826 None:intergenic 45.0%
! AAGGCGTTAAGGGGATGTTT+AGG + chr3_3:21177104-21177123 Msa0446020:CDS 45.0%
AGGCGTTAAGGGGATGTTTA+GGG + chr3_3:21177105-21177124 Msa0446020:CDS 45.0%
GAATGTACCACGCAATTCTC+GGG - chr3_3:21177138-21177157 None:intergenic 45.0%
GGAATGTACCACGCAATTCT+CGG - chr3_3:21177139-21177158 None:intergenic 45.0%
GAGAATTGCGTGGTACATTC+CGG + chr3_3:21177138-21177157 Msa0446020:CDS 45.0%
GAGAAATTCCACAGCCATGA+AGG - chr3_3:21177176-21177195 None:intergenic 45.0%
!! AATGAAAGAGTGCCCAATGG+TGG + chr3_3:21177208-21177227 Msa0446020:CDS 45.0%
!! AAAAATTAGAATTAAAAATT+CGG - chr3_3:21172441-21172460 None:intergenic 5.0%
!! AAATATATGATTATTATAAA+GGG + chr3_3:21175786-21175805 Msa0446020:CDS 5.0%
GTTCGGAGCTTGTGGTTTAC+TGG - chr3_3:21172369-21172388 None:intergenic 50.0%
GAAACGTTGTTCGGAGCTTG+TGG - chr3_3:21172377-21172396 None:intergenic 50.0%
!! CGAAGCACTGACATGGACAA+CGG - chr3_3:21172904-21172923 None:intergenic 50.0%
!! ACAGCTACGAAGCACTGACA+TGG - chr3_3:21172911-21172930 None:intergenic 50.0%
ACTGACACTGACATGGACAC+CGG - chr3_3:21173257-21173276 None:intergenic 50.0%
ACGGAGAGGTAGCGAAATTG+TGG - chr3_3:21173343-21173362 None:intergenic 50.0%
ATGCAGGTACAGAAACGGAG+AGG - chr3_3:21173357-21173376 None:intergenic 50.0%
TATGCTACTGCTGCGACTCA+TGG - chr3_3:21173563-21173582 None:intergenic 50.0%
TGAGTCGCAGCAGTAGCATA+CGG + chr3_3:21173563-21173582 Msa0446020:intron 50.0%
CAGTCTTACACCGACATCAG+AGG - chr3_3:21173927-21173946 None:intergenic 50.0%
!! TCATGGTGGATAGCAGACCA+TGG + chr3_3:21174203-21174222 Msa0446020:intron 50.0%
CCACAATGCCATATATCGGC+AGG - chr3_3:21174252-21174271 None:intergenic 50.0%
CCTGCCGATATATGGCATTG+TGG + chr3_3:21174249-21174268 Msa0446020:intron 50.0%
GGCGCCACAATGCCATATAT+CGG - chr3_3:21174256-21174275 None:intergenic 50.0%
GTTTGTATGGGGAGCTGTTG+CGG + chr3_3:21174459-21174478 Msa0446020:CDS 50.0%
TTTGTATGGGGAGCTGTTGC+GGG + chr3_3:21174460-21174479 Msa0446020:CDS 50.0%
TGGGGAAGGAATGATGCATC+CGG + chr3_3:21174489-21174508 Msa0446020:CDS 50.0%
!! GGTGTAGTACCTGGTGTTAC+TGG + chr3_3:21175087-21175106 Msa0446020:CDS 50.0%
GAGGATTCACATCCTAGCCT+TGG + chr3_3:21175168-21175187 Msa0446020:CDS 50.0%
!! GATTCACATCCTAGCCTTGG+TGG + chr3_3:21175171-21175190 Msa0446020:CDS 50.0%
CAGCAATGAAATGTGCCCAG+TGG - chr3_3:21175197-21175216 None:intergenic 50.0%
CACTGGGCACATTTCATTGC+TGG + chr3_3:21175195-21175214 Msa0446020:CDS 50.0%
! CGCTGCTTTATCACTTCGCA+TGG - chr3_3:21175689-21175708 None:intergenic 50.0%
AAGCAGCGCATGCAAGTTCA+AGG + chr3_3:21175701-21175720 Msa0446020:CDS 50.0%
TGCATATTGAGCTGCCTGCA+TGG - chr3_3:21175817-21175836 None:intergenic 50.0%
GAGCCACAGCAGTTCACTAT+TGG + chr3_3:21176117-21176136 Msa0446020:intron 50.0%
GCAAGGGATGTACCATTTGC+TGG + chr3_3:21176335-21176354 Msa0446020:CDS 50.0%
! TGTACCATTTGCTGGCCTGA+TGG + chr3_3:21176343-21176362 Msa0446020:CDS 50.0%
!! TTCCTTTGAGGGCCTGGTTT+TGG + chr3_3:21176556-21176575 Msa0446020:CDS 50.0%
!! TCCTTTGAGGGCCTGGTTTT+GGG + chr3_3:21176557-21176576 Msa0446020:CDS 50.0%
CAGCTAATCCTCCCAAAACC+AGG - chr3_3:21176571-21176590 None:intergenic 50.0%
!!! CTGGTTTTGGGAGGATTAGC+TGG + chr3_3:21176569-21176588 Msa0446020:CDS 50.0%
!!! GGTTTTGGGAGGATTAGCTG+GGG + chr3_3:21176571-21176590 Msa0446020:CDS 50.0%
!!! GTTTTGGGAGGATTAGCTGG+GGG + chr3_3:21176572-21176591 Msa0446020:CDS 50.0%
TTTGACGACGTCCAAAGGAG+TGG - chr3_3:21176698-21176717 None:intergenic 50.0%
TTGCATGTGTACCTCCCATC+AGG + chr3_3:21176793-21176812 Msa0446020:intron 50.0%
!! ATGGGCTAAGGAAGGCGTTA+AGG + chr3_3:21177093-21177112 Msa0446020:CDS 50.0%
!! TGGGCTAAGGAAGGCGTTAA+GGG + chr3_3:21177094-21177113 Msa0446020:CDS 50.0%
GGCGTTAAGGGGATGTTTAG+GGG + chr3_3:21177106-21177125 Msa0446020:CDS 50.0%
!! ATGAAGGTAAGCGCTGAAGC+CGG - chr3_3:21177160-21177179 None:intergenic 50.0%
CACGACACTGACACCAACAC+AGG - chr3_3:21172880-21172899 None:intergenic 55.0%
ATGGACACCGGACACTGACA+TGG - chr3_3:21173245-21173264 None:intergenic 55.0%
! GAGCTGTTGCGGGTGCTTTT+GGG + chr3_3:21174470-21174489 Msa0446020:CDS 55.0%
! AGCTGTTGCGGGTGCTTTTG+GGG + chr3_3:21174471-21174490 Msa0446020:CDS 55.0%
CGGTCTGTCTGGAAGGTTGA+TGG + chr3_3:21174738-21174757 Msa0446020:CDS 55.0%
GCAAGAGAGCCAGTAACACC+AGG - chr3_3:21175099-21175118 None:intergenic 55.0%
!! GTTACTGGCTCTCTTGCGAC+TGG + chr3_3:21175102-21175121 Msa0446020:CDS 55.0%
GTGAACTGCTGTGGCTCTTG+AGG - chr3_3:21176114-21176133 None:intergenic 55.0%
CAGAGTACGGGAAGCGAAGA+TGG + chr3_3:21176504-21176523 Msa0446020:CDS 55.0%
TCCCAAAACCAGGCCCTCAA+AGG - chr3_3:21176561-21176580 None:intergenic 55.0%
!!! TTTGAGGGCCTGGTTTTGGG+AGG + chr3_3:21176560-21176579 Msa0446020:CDS 55.0%
!! GGGCTAAGGAAGGCGTTAAG+GGG + chr3_3:21177095-21177114 Msa0446020:CDS 55.0%
GGCTTCAGCGCTTACCTTCA+TGG + chr3_3:21177159-21177178 Msa0446020:CDS 55.0%
AGCGCTTACCTTCATGGCTG+TGG + chr3_3:21177165-21177184 Msa0446020:CDS 55.0%
CCGGACACTGACATGGACAC+CGG - chr3_3:21173238-21173257 None:intergenic 60.0%
CCGGTGTCCATGTCAGTGTC+CGG + chr3_3:21173235-21173254 Msa0446020:intron 60.0%
! GGAGCTGTTGCGGGTGCTTT+TGG + chr3_3:21174469-21174488 Msa0446020:CDS 60.0%
!! GTTGCGGGTGCTTTTGGGGA+AGG + chr3_3:21174475-21174494 Msa0446020:CDS 60.0%
TGCAGATGGTGCGGTCTGTC+TGG + chr3_3:21174727-21174746 Msa0446020:CDS 60.0%
GATGGTGCGGTCTGTCTGGA+AGG + chr3_3:21174731-21174750 Msa0446020:CDS 60.0%
!! ATCCTAGCCTTGGTGGCCAC+TGG + chr3_3:21175178-21175197 Msa0446020:CDS 60.0%
!! TCCTAGCCTTGGTGGCCACT+GGG + chr3_3:21175179-21175198 Msa0446020:CDS 60.0%
AATGTGCCCAGTGGCCACCA+AGG - chr3_3:21175188-21175207 None:intergenic 60.0%
GTAGCGTCCCGAGAATTGCG+TGG + chr3_3:21177128-21177147 Msa0446020:CDS 60.0%
GGAATGGGGTGGCAATGCCC+AGG + chr3_3:21173685-21173704 Msa0446020:intron 65.0%
GCCCAGTGGCCACCAAGGCT+AGG - chr3_3:21175183-21175202 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 21172251 21177640 21172251 ID=Msa0446020;Name=Msa0446020
chr3_3 mRNA 21172251 21177640 21172251 ID=Msa0446020-mRNA-1;Parent=Msa0446020;Name=Msa0446020-mRNA-1;_AED=0.08;_eAED=0.08;_QI=93|1|1|1|1|1|9|349|358
chr3_3 exon 21172251 21172413 21172251 ID=Msa0446020-mRNA-1:exon:4424;Parent=Msa0446020-mRNA-1
chr3_3 exon 21174449 21174564 21174449 ID=Msa0446020-mRNA-1:exon:4425;Parent=Msa0446020-mRNA-1
chr3_3 exon 21174711 21174768 21174711 ID=Msa0446020-mRNA-1:exon:4426;Parent=Msa0446020-mRNA-1
chr3_3 exon 21175076 21175225 21175076 ID=Msa0446020-mRNA-1:exon:4427;Parent=Msa0446020-mRNA-1
chr3_3 exon 21175657 21175867 21175657 ID=Msa0446020-mRNA-1:exon:4428;Parent=Msa0446020-mRNA-1
chr3_3 exon 21176319 21176364 21176319 ID=Msa0446020-mRNA-1:exon:4429;Parent=Msa0446020-mRNA-1
chr3_3 exon 21176473 21176593 21176473 ID=Msa0446020-mRNA-1:exon:4430;Parent=Msa0446020-mRNA-1
chr3_3 exon 21176677 21176749 21176677 ID=Msa0446020-mRNA-1:exon:4431;Parent=Msa0446020-mRNA-1
chr3_3 exon 21177060 21177640 21177060 ID=Msa0446020-mRNA-1:exon:4432;Parent=Msa0446020-mRNA-1
chr3_3 five_prime_UTR 21172251 21172343 21172251 ID=Msa0446020-mRNA-1:five_prime_utr;Parent=Msa0446020-mRNA-1
chr3_3 CDS 21172344 21172413 21172344 ID=Msa0446020-mRNA-1:cds;Parent=Msa0446020-mRNA-1
chr3_3 CDS 21174449 21174564 21174449 ID=Msa0446020-mRNA-1:cds;Parent=Msa0446020-mRNA-1
chr3_3 CDS 21174711 21174768 21174711 ID=Msa0446020-mRNA-1:cds;Parent=Msa0446020-mRNA-1
chr3_3 CDS 21175076 21175225 21175076 ID=Msa0446020-mRNA-1:cds;Parent=Msa0446020-mRNA-1
chr3_3 CDS 21175657 21175867 21175657 ID=Msa0446020-mRNA-1:cds;Parent=Msa0446020-mRNA-1
chr3_3 CDS 21176319 21176364 21176319 ID=Msa0446020-mRNA-1:cds;Parent=Msa0446020-mRNA-1
chr3_3 CDS 21176473 21176593 21176473 ID=Msa0446020-mRNA-1:cds;Parent=Msa0446020-mRNA-1
chr3_3 CDS 21176677 21176749 21176677 ID=Msa0446020-mRNA-1:cds;Parent=Msa0446020-mRNA-1
chr3_3 CDS 21177060 21177291 21177060 ID=Msa0446020-mRNA-1:cds;Parent=Msa0446020-mRNA-1
chr3_3 three_prime_UTR 21177292 21177640 21177292 ID=Msa0446020-mRNA-1:three_prime_utr;Parent=Msa0446020-mRNA-1
Gene Sequence

>Msa0446020

ATGGCAGTTCAAAGCTCCATTTCCAGTAAACCACAAGCTCCGAACAACGTTTCTCACGATCATTTTTTCGTATGGAGGGAGTTTGTATGGGGAGCTGTTGCGGGTGCTTTTGGGGAAGGAATGATGCATCCGGTAGATACCATCAAAACACGAATACAAAGTCAAGCTATTCTAAATGGTGTTAAGAACCAGAAAGGCATATTGCAGATGGTGCGGTCTGTCTGGAAGGTTGATGGATTAAGAGGCTTTTACAGGGGTGTAGTACCTGGTGTTACTGGCTCTCTTGCGACTGGTGCAACATATTTTGGTGTCATAGAGTCAACTAAAAAGTGGATTGAGGATTCACATCCTAGCCTTGGTGGCCACTGGGCACATTTCATTGCTGGAGCTGTTGGAGATACACTTGGGTCTGTAGTATACGTTCCATGCGAAGTGATAAAGCAGCGCATGCAAGTTCAAGGCACAATTACATCCTGGAGTTCTACTGCAATGAAGAATGGCATTGCAATAAAACCTGGTGCAGAAATATATGATTATTATAAAGGGATGTTCCATGCAGGCAGCTCAATATGCAGAACACAGGGTTTAAAGGGTTTATATGCAGGATATTTGTCTACACTGGCAAGGGATGTACCATTTGCTGGCCTGATGGTTGTGTTCTATGAAGCTTTGAAAGATGCTACAGAGTACGGGAAGCGAAGATGGATATCTAATCCAAATTGGCACGTTAATAATTCCTTTGAGGGCCTGGTTTTGGGAGGATTAGCTGGGGGTCTCAGTGCATATCTCACCACTCCTTTGGACGTCGTCAAAACTAGGCTGCAAGTTCAGGGTTCAACTTTGAGGTATGATGGTTGGTTGGATGCAATTTACAACATATGGGCTAAGGAAGGCGTTAAGGGGATGTTTAGGGGTAGCGTCCCGAGAATTGCGTGGTACATTCCGGCTTCAGCGCTTACCTTCATGGCTGTGGAATTTCTCAGAGAAAATTTTAATGAAAGAGTGCCCAATGGTGGTTCGATCAATGTTGCTAGAGTATCGGTAGAAAATAAGAAATCTTTGGAGGAGGCTAGTTAA
Protein sequence

>Msa0446020

MAVQSSISSKPQAPNNVSHDHFFVWREFVWGAVAGAFGEGMMHPVDTIKTRIQSQAILNGVKNQKGILQMVRSVWKVDGLRGFYRGVVPGVTGSLATGATYFGVIESTKKWIEDSHPSLGGHWAHFIAGAVGDTLGSVVYVPCEVIKQRMQVQGTITSWSSTAMKNGIAIKPGAEIYDYYKGMFHAGSSICRTQGLKGLYAGYLSTLARDVPFAGLMVVFYEALKDATEYGKRRWISNPNWHVNNSFEGLVLGGLAGGLSAYLTTPLDVVKTRLQVQGSTLRYDGWLDAIYNIWAKEGVKGMFRGSVPRIAWYIPASALTFMAVEFLRENFNERVPNGGSINVARVSVENKKSLEEAS*