Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0550430 | AES89158.1 | 88.166 | 169 | 19 | 1 | 46 | 213 | 1 | 169 | 1.91e-96 | 296 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0550430 | G7JHE8 | 88.166 | 169 | 19 | 1 | 46 | 213 | 1 | 169 | 9.10e-97 | 296 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004860 | Msa0550430 | 0.805199 | 1.497662e-49 | -8.615850e-47 |
| Msa0004880 | Msa0550430 | 0.831063 | 2.063445e-55 | -8.615850e-47 |
| Msa0004920 | Msa0550430 | 0.811874 | 5.627089e-51 | -8.615850e-47 |
| Msa0011170 | Msa0550430 | 0.806478 | 8.068467e-50 | -8.615850e-47 |
| Msa0012040 | Msa0550430 | 0.811132 | 8.157302e-51 | -8.615850e-47 |
| Msa0017510 | Msa0550430 | 0.857737 | 1.331217e-62 | -8.615850e-47 |
| Msa0020300 | Msa0550430 | 0.807805 | 4.224820e-50 | -8.615850e-47 |
| Msa0028660 | Msa0550430 | 0.809419 | 1.910106e-50 | -8.615850e-47 |
| Msa0037700 | Msa0550430 | 0.821665 | 3.578813e-53 | -8.615850e-47 |
| Msa0040450 | Msa0550430 | 0.805846 | 1.096178e-49 | -8.615850e-47 |
| Msa0051770 | Msa0550430 | 0.827076 | 1.909870e-54 | -8.615850e-47 |
| Msa0051790 | Msa0550430 | 0.809373 | 1.954006e-50 | -8.615850e-47 |
| Msa0052730 | Msa0550430 | 0.800980 | 1.117396e-48 | -8.615850e-47 |
| Msa0053780 | Msa0550430 | 0.804556 | 2.040965e-49 | -8.615850e-47 |
| Msa0067620 | Msa0550430 | 0.807660 | 4.533792e-50 | -8.615850e-47 |
| Msa0071910 | Msa0550430 | -0.805900 | 1.067674e-49 | -8.615850e-47 |
| Msa0081930 | Msa0550430 | 0.806830 | 6.797545e-50 | -8.615850e-47 |
| Msa0086650 | Msa0550430 | 0.825471 | 4.603681e-54 | -8.615850e-47 |
| Msa0091570 | Msa0550430 | 0.805488 | 1.303106e-49 | -8.615850e-47 |
| Msa0096450 | Msa0550430 | 0.828508 | 8.647569e-55 | -8.615850e-47 |
| Msa0101710 | Msa0550430 | 0.827019 | 1.971459e-54 | -8.615850e-47 |
| Msa0103000 | Msa0550430 | 0.804777 | 1.835820e-49 | -8.615850e-47 |
| Msa0105700 | Msa0550430 | 0.804473 | 2.124427e-49 | -8.615850e-47 |
| Msa0106670 | Msa0550430 | 0.801539 | 8.583744e-49 | -8.615850e-47 |
| Msa0110970 | Msa0550430 | 0.825507 | 4.515446e-54 | -8.615850e-47 |
| Msa0113750 | Msa0550430 | 0.826075 | 3.310705e-54 | -8.615850e-47 |
| Msa0119960 | Msa0550430 | 0.811713 | 6.102050e-51 | -8.615850e-47 |
| Msa0122590 | Msa0550430 | 0.804217 | 2.401415e-49 | -8.615850e-47 |
| Msa0128020 | Msa0550430 | 0.804388 | 2.212918e-49 | -8.615850e-47 |
| Msa0133130 | Msa0550430 | 0.828128 | 1.068131e-54 | -8.615850e-47 |
| Msa0135380 | Msa0550430 | 0.802374 | 5.782460e-49 | -8.615850e-47 |
| Msa0140780 | Msa0550430 | 0.812745 | 3.633117e-51 | -8.615850e-47 |
| Msa0145310 | Msa0550430 | 0.801955 | 7.051650e-49 | -8.615850e-47 |
| Msa0148100 | Msa0550430 | 0.841871 | 3.652421e-58 | -8.615850e-47 |
| Msa0150820 | Msa0550430 | 0.803006 | 4.283574e-49 | -8.615850e-47 |
| Msa0157100 | Msa0550430 | 0.806997 | 6.266194e-50 | -8.615850e-47 |
| Msa0157290 | Msa0550430 | 0.856991 | 2.212497e-62 | -8.615850e-47 |
| Msa0159180 | Msa0550430 | 0.815676 | 8.181945e-52 | -8.615850e-47 |
| Msa0165210 | Msa0550430 | 0.808668 | 2.765461e-50 | -8.615850e-47 |
| Msa0166870 | Msa0550430 | 0.812547 | 4.013395e-51 | -8.615850e-47 |
| Msa0173990 | Msa0550430 | 0.819623 | 1.054097e-52 | -8.615850e-47 |
| Msa0184020 | Msa0550430 | 0.809028 | 2.316863e-50 | -8.615850e-47 |
| Msa0184960 | Msa0550430 | 0.800100 | 1.688861e-48 | -8.615850e-47 |
| Msa0185480 | Msa0550430 | 0.838234 | 3.246799e-57 | -8.615850e-47 |
| Msa0188630 | Msa0550430 | 0.800981 | 1.116847e-48 | -8.615850e-47 |
| Msa0188680 | Msa0550430 | -0.808412 | 3.137128e-50 | -8.615850e-47 |
| Msa0200260 | Msa0550430 | 0.816663 | 4.923880e-52 | -8.615850e-47 |
| Msa0205510 | Msa0550430 | 0.808238 | 3.415810e-50 | -8.615850e-47 |
| Msa0210450 | Msa0550430 | 0.800239 | 1.582326e-48 | -8.615850e-47 |
| Msa0217400 | Msa0550430 | 0.801931 | 7.133988e-49 | -8.615850e-47 |
| Msa0220440 | Msa0550430 | 0.818603 | 1.798403e-52 | -8.615850e-47 |
| Msa0220580 | Msa0550430 | 0.816148 | 6.419917e-52 | -8.615850e-47 |
| Msa0220740 | Msa0550430 | 0.802012 | 6.866605e-49 | -8.615850e-47 |
| Msa0223410 | Msa0550430 | -0.806555 | 7.772408e-50 | -8.615850e-47 |
| Msa0223740 | Msa0550430 | 0.801214 | 1.000811e-48 | -8.615850e-47 |
| Msa0226890 | Msa0550430 | 0.823719 | 1.190529e-53 | -8.615850e-47 |
| Msa0371540 | Msa0550430 | 0.814714 | 1.338277e-51 | -8.615850e-47 |
| Msa0372660 | Msa0550430 | 0.804989 | 1.657308e-49 | -8.615850e-47 |
| Msa0372670 | Msa0550430 | 0.801462 | 8.902852e-49 | -8.615850e-47 |
| Msa0373930 | Msa0550430 | 0.843009 | 1.822852e-58 | -8.615850e-47 |
| Msa0376350 | Msa0550430 | 0.802232 | 6.185900e-49 | -8.615850e-47 |
| Msa0379640 | Msa0550430 | 0.821306 | 4.330796e-53 | -8.615850e-47 |
| Msa0388950 | Msa0550430 | 0.804309 | 2.298031e-49 | -8.615850e-47 |
| Msa0389340 | Msa0550430 | 0.828702 | 7.761370e-55 | -8.615850e-47 |
| Msa0398950 | Msa0550430 | 0.804717 | 1.889251e-49 | -8.615850e-47 |
| Msa0410650 | Msa0550430 | 0.816505 | 5.342364e-52 | -8.615850e-47 |
| Msa0416300 | Msa0550430 | 0.806241 | 9.051964e-50 | -8.615850e-47 |
| Msa0419820 | Msa0550430 | 0.809702 | 1.660331e-50 | -8.615850e-47 |
| Msa0419970 | Msa0550430 | 0.809320 | 2.005837e-50 | -8.615850e-47 |
| Msa0428930 | Msa0550430 | 0.815922 | 7.212009e-52 | -8.615850e-47 |
| Msa0431690 | Msa0550430 | 0.802119 | 6.525237e-49 | -8.615850e-47 |
| Msa0433640 | Msa0550430 | 0.810945 | 8.957025e-51 | -8.615850e-47 |
| Msa0442200 | Msa0550430 | 0.815378 | 9.533064e-52 | -8.615850e-47 |
| Msa0442670 | Msa0550430 | 0.802292 | 6.012112e-49 | -8.615850e-47 |
| Msa0446020 | Msa0550430 | 0.823819 | 1.127974e-53 | -8.615850e-47 |
| Msa0449830 | Msa0550430 | 0.811812 | 5.804457e-51 | -8.615850e-47 |
| Msa0458010 | Msa0550430 | 0.815607 | 8.479579e-52 | -8.615850e-47 |
| Msa0466060 | Msa0550430 | 0.821073 | 4.899735e-53 | -8.615850e-47 |
| Msa0467060 | Msa0550430 | 0.815911 | 7.253551e-52 | -8.615850e-47 |
| Msa0477130 | Msa0550430 | -0.801238 | 9.894649e-49 | -8.615850e-47 |
| Msa0479970 | Msa0550430 | 0.803955 | 2.723127e-49 | -8.615850e-47 |
| Msa0243100 | Msa0550430 | 0.828438 | 8.988388e-55 | -8.615850e-47 |
| Msa0243710 | Msa0550430 | 0.811896 | 5.567192e-51 | -8.615850e-47 |
| Msa0246430 | Msa0550430 | 0.811787 | 5.878545e-51 | -8.615850e-47 |
| Msa0258760 | Msa0550430 | 0.843041 | 1.788249e-58 | -8.615850e-47 |
| Msa0269450 | Msa0550430 | 0.801907 | 7.215990e-49 | -8.615850e-47 |
| Msa0270100 | Msa0550430 | 0.809038 | 2.304687e-50 | -8.615850e-47 |
| Msa0270220 | Msa0550430 | -0.802610 | 5.170134e-49 | -8.615850e-47 |
| Msa0270270 | Msa0550430 | 0.810180 | 1.310196e-50 | -8.615850e-47 |
| Msa0282250 | Msa0550430 | 0.828636 | 8.054398e-55 | -8.615850e-47 |
| Msa0287410 | Msa0550430 | 0.805219 | 1.483679e-49 | -8.615850e-47 |
| Msa0287650 | Msa0550430 | 0.814876 | 1.232251e-51 | -8.615850e-47 |
| Msa0296560 | Msa0550430 | 0.806186 | 9.295442e-50 | -8.615850e-47 |
| Msa0298700 | Msa0550430 | 0.811583 | 6.511936e-51 | -8.615850e-47 |
| Msa0299580 | Msa0550430 | 0.810099 | 1.364032e-50 | -8.615850e-47 |
| Msa0302000 | Msa0550430 | 0.800501 | 1.399006e-48 | -8.615850e-47 |
| Msa0302580 | Msa0550430 | -0.801059 | 1.076512e-48 | -8.615850e-47 |
| Msa0306210 | Msa0550430 | -0.803252 | 3.809317e-49 | -8.615850e-47 |
| Msa0307830 | Msa0550430 | -0.802947 | 4.405463e-49 | -8.615850e-47 |
| Msa0309550 | Msa0550430 | 0.812360 | 4.408933e-51 | -8.615850e-47 |
| Msa0311700 | Msa0550430 | 0.815170 | 1.060613e-51 | -8.615850e-47 |
| Msa0315290 | Msa0550430 | 0.803102 | 4.092132e-49 | -8.615850e-47 |
| Msa0321860 | Msa0550430 | 0.813664 | 2.282570e-51 | -8.615850e-47 |
| Msa0322690 | Msa0550430 | 0.801592 | 8.372610e-49 | -8.615850e-47 |
| Msa0323080 | Msa0550430 | 0.833485 | 5.189678e-56 | -8.615850e-47 |
| Msa0323610 | Msa0550430 | 0.802916 | 4.470302e-49 | -8.615850e-47 |
| Msa0323620 | Msa0550430 | 0.808934 | 2.426566e-50 | -8.615850e-47 |
| Msa0335040 | Msa0550430 | 0.817800 | 2.732647e-52 | -8.615850e-47 |
| Msa0335270 | Msa0550430 | 0.802216 | 6.231355e-49 | -8.615850e-47 |
| Msa0336420 | Msa0550430 | 0.812901 | 3.357109e-51 | -8.615850e-47 |
| Msa0339620 | Msa0550430 | 0.805976 | 1.029160e-49 | -8.615850e-47 |
| Msa0344910 | Msa0550430 | 0.803959 | 2.717740e-49 | -8.615850e-47 |
| Msa0344980 | Msa0550430 | 0.805276 | 1.443497e-49 | -8.615850e-47 |
| Msa0347770 | Msa0550430 | 0.804457 | 2.141042e-49 | -8.615850e-47 |
| Msa0358170 | Msa0550430 | 0.801066 | 1.072795e-48 | -8.615850e-47 |
| Msa0484780 | Msa0550430 | 0.845313 | 4.389142e-59 | -8.615850e-47 |
| Msa0485120 | Msa0550430 | 0.819461 | 1.147322e-52 | -8.615850e-47 |
| Msa0495320 | Msa0550430 | 0.807147 | 5.825990e-50 | -8.615850e-47 |
| Msa0503560 | Msa0550430 | 0.803289 | 3.743338e-49 | -8.615850e-47 |
| Msa0503580 | Msa0550430 | 0.810468 | 1.135631e-50 | -8.615850e-47 |
| Msa0504020 | Msa0550430 | 0.801056 | 1.077948e-48 | -8.615850e-47 |
| Msa0507680 | Msa0550430 | 0.812067 | 5.109438e-51 | -8.615850e-47 |
| Msa0512900 | Msa0550430 | 0.816031 | 6.819165e-52 | -8.615850e-47 |
| Msa0515010 | Msa0550430 | 0.816145 | 6.430959e-52 | -8.615850e-47 |
| Msa0517330 | Msa0550430 | 0.801527 | 8.633230e-49 | -8.615850e-47 |
| Msa0517340 | Msa0550430 | 0.816483 | 5.402528e-52 | -8.615850e-47 |
| Msa0521540 | Msa0550430 | 0.817980 | 2.488156e-52 | -8.615850e-47 |
| Msa0523460 | Msa0550430 | 0.821693 | 3.525522e-53 | -8.615850e-47 |
| Msa0534590 | Msa0550430 | 0.810474 | 1.132398e-50 | -8.615850e-47 |
| Msa0536220 | Msa0550430 | 0.815381 | 9.517582e-52 | -8.615850e-47 |
| Msa0540070 | Msa0550430 | 0.810934 | 9.006034e-51 | -8.615850e-47 |
| Msa0545070 | Msa0550430 | 0.812598 | 3.911640e-51 | -8.615850e-47 |
| Msa0547890 | Msa0550430 | 0.800421 | 1.452620e-48 | -8.615850e-47 |
| Msa0550430 | Msa0551890 | 0.810452 | 1.144896e-50 | -8.615850e-47 |
| Msa0550430 | Msa0553460 | 0.801859 | 7.379738e-49 | -8.615850e-47 |
| Msa0550430 | Msa0562440 | 0.830726 | 2.496496e-55 | -8.615850e-47 |
| Msa0550430 | Msa0563840 | 0.803471 | 3.431164e-49 | -8.615850e-47 |
| Msa0550430 | Msa0571140 | 0.802343 | 5.868833e-49 | -8.615850e-47 |
| Msa0550430 | Msa0571700 | 0.808679 | 2.751534e-50 | -8.615850e-47 |
| Msa0550430 | Msa0577500 | 0.805707 | 1.172378e-49 | -8.615850e-47 |
| Msa0550430 | Msa0578970 | 0.816315 | 5.891059e-52 | -8.615850e-47 |
| Msa0550430 | Msa0597330 | 0.804857 | 1.766069e-49 | -8.615850e-47 |
| Msa0550430 | Msa0599890 | 0.818130 | 2.301339e-52 | -8.615850e-47 |
| Msa0550430 | Msa0601850 | 0.816644 | 4.972035e-52 | -8.615850e-47 |
| Msa0550430 | Msa0607050 | 0.807302 | 5.402577e-50 | -8.615850e-47 |
| Msa0550430 | Msa0607540 | 0.801558 | 8.506529e-49 | -8.615850e-47 |
| Msa0550430 | Msa0610430 | 0.851492 | 8.565921e-61 | -8.615850e-47 |
| Msa0550430 | Msa0610590 | 0.819397 | 1.186767e-52 | -8.615850e-47 |
| Msa0550430 | Msa0623080 | 0.804925 | 1.709563e-49 | -8.615850e-47 |
| Msa0550430 | Msa0631120 | 0.803190 | 3.923265e-49 | -8.615850e-47 |
| Msa0550430 | Msa0633840 | 0.800614 | 1.326658e-48 | -8.615850e-47 |
| Msa0550430 | Msa0638280 | 0.807758 | 4.322086e-50 | -8.615850e-47 |
| Msa0550430 | Msa0643180 | 0.807425 | 5.086381e-50 | -8.615850e-47 |
| Msa0550430 | Msa0647450 | -0.801581 | 8.417856e-49 | -8.615850e-47 |
| Msa0550430 | Msa0648880 | 0.800329 | 1.516967e-48 | -8.615850e-47 |
| Msa0550430 | Msa0651190 | 0.812767 | 3.592765e-51 | -8.615850e-47 |
| Msa0550430 | Msa0657970 | 0.851871 | 6.692635e-61 | -8.615850e-47 |
| Msa0550430 | Msa0662650 | 0.808160 | 3.549918e-50 | -8.615850e-47 |
| Msa0550430 | Msa0663920 | 0.807888 | 4.055902e-50 | -8.615850e-47 |
| Msa0550430 | Msa0669340 | 0.805646 | 1.207338e-49 | -8.615850e-47 |
| Msa0550430 | Msa0669440 | 0.809558 | 1.783512e-50 | -8.615850e-47 |
| Msa0550430 | Msa0673460 | 0.809888 | 1.514616e-50 | -8.615850e-47 |
| Msa0550430 | Msa0677270 | 0.800324 | 1.520513e-48 | -8.615850e-47 |
| Msa0550430 | Msa0682550 | 0.804846 | 1.775453e-49 | -8.615850e-47 |
| Msa0550430 | Msa0684500 | 0.807913 | 4.006724e-50 | -8.615850e-47 |
| Msa0550430 | Msa0691380 | 0.816122 | 6.506544e-52 | -8.615850e-47 |
| Msa0550430 | Msa0692230 | 0.815665 | 8.230614e-52 | -8.615850e-47 |
| Msa0550430 | Msa0692830 | 0.815608 | 8.474249e-52 | -8.615850e-47 |
| Msa0550430 | Msa0692950 | 0.815984 | 6.984395e-52 | -8.615850e-47 |
| Msa0550430 | Msa0693380 | 0.825856 | 3.730371e-54 | -8.615850e-47 |
| Msa0550430 | Msa0708860 | 0.807847 | 4.138993e-50 | -8.615850e-47 |
| Msa0550430 | Msa0709500 | 0.806835 | 6.781553e-50 | -8.615850e-47 |
| Msa0550430 | Msa0716840 | 0.805730 | 1.159002e-49 | -8.615850e-47 |
| Msa0550430 | Msa0724830 | 0.802908 | 4.486796e-49 | -8.615850e-47 |
| Msa0550430 | Msa0727710 | 0.810396 | 1.177161e-50 | -8.615850e-47 |
| Msa0550430 | Msa0734660 | 0.812506 | 4.096211e-51 | -8.615850e-47 |
| Msa0550430 | Msa0743720 | 0.849716 | 2.704871e-60 | -8.615850e-47 |
| Msa0550430 | Msa0745790 | 0.834192 | 3.454319e-56 | -8.615850e-47 |
| Msa0550430 | Msa0750430 | 0.821997 | 2.997806e-53 | -8.615850e-47 |
| Msa0550430 | Msa0765380 | 0.801928 | 7.144277e-49 | -8.615850e-47 |
| Msa0550430 | Msa0769920 | 0.809692 | 1.668562e-50 | -8.615850e-47 |
| Msa0550430 | Msa0771720 | 0.838914 | 2.166324e-57 | -8.615850e-47 |
| Msa0550430 | Msa0790390 | -0.800305 | 1.534164e-48 | -8.615850e-47 |
| Msa0550430 | Msa0790510 | 0.808438 | 3.097234e-50 | -8.615850e-47 |
| Msa0550430 | Msa0790660 | -0.818095 | 2.344029e-52 | -8.615850e-47 |
| Msa0550430 | Msa0790850 | 0.805382 | 1.371312e-49 | -8.615850e-47 |
| Msa0550430 | Msa0795080 | 0.813618 | 2.336361e-51 | -8.615850e-47 |
| Msa0550430 | Msa0816700 | 0.800496 | 1.402681e-48 | -8.615850e-47 |
| Msa0550430 | Msa0824680 | 0.856672 | 2.746821e-62 | -8.615850e-47 |
| Msa0550430 | Msa0827040 | 0.821716 | 3.481829e-53 | -8.615850e-47 |
| Msa0550430 | Msa0842830 | 0.801430 | 9.038556e-49 | -8.615850e-47 |
| Msa0550430 | Msa0844240 | 0.810759 | 9.823876e-51 | -8.615850e-47 |
| Msa0550430 | Msa0844900 | 0.800596 | 1.338084e-48 | -8.615850e-47 |
| Msa0550430 | Msa0846810 | 0.801791 | 7.620957e-49 | -8.615850e-47 |
| Msa0550430 | Msa0850960 | 0.808369 | 3.204306e-50 | -8.615850e-47 |
| Msa0550430 | Msa0863870 | 0.855067 | 8.090891e-62 | -8.615850e-47 |
| Msa0550430 | Msa0876200 | 0.822627 | 2.140732e-53 | -8.615850e-47 |
| Msa0550430 | Msa0877410 | 0.820047 | 8.430250e-53 | -8.615850e-47 |
| Msa0550430 | Msa0878290 | 0.807033 | 6.157923e-50 | -8.615850e-47 |
| Msa0550430 | Msa0880140 | 0.857001 | 2.197154e-62 | -8.615850e-47 |
| Msa0550430 | Msa0881020 | 0.802811 | 4.698994e-49 | -8.615850e-47 |
| Msa0550430 | Msa0882510 | 0.808099 | 3.657929e-50 | -8.615850e-47 |
| Msa0550430 | Msa0896750 | 0.801348 | 9.393253e-49 | -8.615850e-47 |
| Msa0550430 | Msa0900180 | 0.807655 | 4.545499e-50 | -8.615850e-47 |
| Msa0550430 | Msa0923330 | 0.800927 | 1.145386e-48 | -8.615850e-47 |
| Msa0550430 | Msa0927670 | 0.819841 | 9.395922e-53 | -8.615850e-47 |
| Msa0550430 | Msa0933230 | 0.807349 | 5.279070e-50 | -8.615850e-47 |
| Msa0550430 | Msa0936270 | 0.801887 | 7.284947e-49 | -8.615850e-47 |
| Msa0550430 | Msa0944770 | 0.847468 | 1.134377e-59 | -8.615850e-47 |
| Msa0550430 | Msa0947660 | 0.806315 | 8.733871e-50 | -8.615850e-47 |
| Msa0550430 | Msa0959360 | 0.803167 | 3.965914e-49 | -8.615850e-47 |
| Msa0550430 | Msa0968680 | 0.814525 | 1.473702e-51 | -8.615850e-47 |
| Msa0550430 | Msa0971020 | 0.802590 | 5.218724e-49 | -8.615850e-47 |
| Msa0550430 | Msa0971090 | 0.800800 | 1.216095e-48 | -8.615850e-47 |
| Msa0550430 | Msa0992490 | -0.813864 | 2.062303e-51 | -8.615850e-47 |
| Msa0550430 | Msa0993290 | 0.802541 | 5.342828e-49 | -8.615850e-47 |
| Msa0550430 | Msa0993600 | 0.801766 | 7.712424e-49 | -8.615850e-47 |
| Msa0550430 | Msa1014540 | 0.809416 | 1.913073e-50 | -8.615850e-47 |
| Msa0550430 | Msa1063950 | 0.801455 | 8.931890e-49 | -8.615850e-47 |
| Msa0550430 | Msa1075220 | -0.819205 | 1.312330e-52 | -8.615850e-47 |
| Msa0550430 | Msa1082500 | 0.853661 | 2.061697e-61 | -8.615850e-47 |
| Msa0550430 | Msa1085200 | 0.817876 | 2.627101e-52 | -8.615850e-47 |
| Msa0550430 | Msa1090260 | 0.833565 | 4.957055e-56 | -8.615850e-47 |
| Msa0550430 | Msa1092090 | 0.804667 | 1.935342e-49 | -8.615850e-47 |
| Msa0550430 | Msa1097840 | 0.812073 | 5.094027e-51 | -8.615850e-47 |
| Msa0550430 | Msa1098420 | 0.811051 | 8.493449e-51 | -8.615850e-47 |
| Msa0550430 | Msa1100720 | 0.802413 | 5.677154e-49 | -8.615850e-47 |
| Msa0550430 | Msa1108160 | 0.820891 | 5.396814e-53 | -8.615850e-47 |
| Msa0550430 | Msa1111110 | 0.801205 | 1.004843e-48 | -8.615850e-47 |
| Msa0550430 | Msa1116130 | -0.820478 | 6.716665e-53 | -8.615850e-47 |
| Msa0550430 | Msa1125760 | 0.807204 | 5.665034e-50 | -8.615850e-47 |
| Msa0550430 | Msa1131220 | 0.812059 | 5.130029e-51 | -8.615850e-47 |
| Msa0550430 | Msa1131940 | -0.800446 | 1.435596e-48 | -8.615850e-47 |
| Msa0550430 | Msa1147900 | 0.807690 | 4.469312e-50 | -8.615850e-47 |
| Msa0550430 | Msa1151710 | 0.800374 | 1.484851e-48 | -8.615850e-47 |
| Msa0550430 | Msa1151720 | 0.818884 | 1.552848e-52 | -8.615850e-47 |
| Msa0550430 | Msa1151910 | 0.819221 | 1.301346e-52 | -8.615850e-47 |
| Msa0550430 | Msa1154710 | 0.822165 | 2.740852e-53 | -8.615850e-47 |
| Msa0550430 | Msa1162550 | -0.814713 | 1.339399e-51 | -8.615850e-47 |
| Msa0550430 | Msa1171360 | 0.806828 | 6.805849e-50 | -8.615850e-47 |
| Msa0550430 | Msa1171870 | 0.819579 | 1.078429e-52 | -8.615850e-47 |
| Msa0550430 | Msa1172670 | 0.819715 | 1.004169e-52 | -8.615850e-47 |
| Msa0550430 | Msa1174040 | 0.816315 | 5.893086e-52 | -8.615850e-47 |
| Msa0550430 | Msa1179460 | 0.815779 | 7.761428e-52 | -8.615850e-47 |
| Msa0550430 | Msa1187520 | 0.800087 | 1.698820e-48 | -8.615850e-47 |
| Msa0550430 | Msa1190930 | 0.801308 | 9.571758e-49 | -8.615850e-47 |
| Msa0550430 | Msa1199220 | 0.814445 | 1.535194e-51 | -8.615850e-47 |
| Msa0550430 | Msa1199560 | 0.800079 | 1.705313e-48 | -8.615850e-47 |
| Msa0550430 | Msa1203250 | 0.809797 | 1.584106e-50 | -8.615850e-47 |
| Msa0550430 | Msa1205010 | -0.806567 | 7.727128e-50 | -8.615850e-47 |
| Msa0550430 | Msa1205130 | 0.820197 | 7.788305e-53 | -8.615850e-47 |
| Msa0550430 | Msa1206020 | 0.805294 | 1.431043e-49 | -8.615850e-47 |
| Msa0550430 | Msa1211150 | -0.811876 | 5.621536e-51 | -8.615850e-47 |
| Msa0550430 | Msa1213440 | -0.808203 | 3.475104e-50 | -8.615850e-47 |
| Msa0550430 | Msa1217810 | 0.802608 | 5.174214e-49 | -8.615850e-47 |
| Msa0550430 | Msa1217830 | 0.805891 | 1.072518e-49 | -8.615850e-47 |
| Msa0550430 | Msa1228210 | 0.834914 | 2.275749e-56 | -8.615850e-47 |
| Msa0550430 | Msa1233500 | 0.838869 | 2.225145e-57 | -8.615850e-47 |
| Msa0550430 | Msa1233890 | 0.832464 | 9.316197e-56 | -8.615850e-47 |
| Msa0550430 | Msa1240180 | 0.805661 | 1.198609e-49 | -8.615850e-47 |
| Msa0550430 | Msa1242220 | 0.813301 | 2.743522e-51 | -8.615850e-47 |
| Msa0550430 | Msa1244250 | 0.811477 | 6.864323e-51 | -8.615850e-47 |
| Msa0550430 | Msa1244610 | 0.812858 | 3.431895e-51 | -8.615850e-47 |
| Msa0550430 | Msa1247250 | 0.817359 | 3.435543e-52 | -8.615850e-47 |
| Msa0550430 | Msa1250890 | 0.808126 | 3.609661e-50 | -8.615850e-47 |
| Msa0550430 | Msa1252740 | 0.817836 | 2.681963e-52 | -8.615850e-47 |
| Msa0550430 | Msa1254510 | 0.821977 | 3.030579e-53 | -8.615850e-47 |
| Msa0550430 | Msa1271280 | 0.823530 | 1.318235e-53 | -8.615850e-47 |
| Msa0550430 | Msa1271290 | 0.809038 | 2.304941e-50 | -8.615850e-47 |
| Msa0550430 | Msa1271300 | 0.816252 | 6.087481e-52 | -8.615850e-47 |
| Msa0550430 | Msa1275360 | 0.817054 | 4.022615e-52 | -8.615850e-47 |
| Msa0550430 | Msa1276440 | 0.824021 | 1.011377e-53 | -8.615850e-47 |
| Msa0550430 | Msa1278840 | 0.831686 | 1.450357e-55 | -8.615850e-47 |
| Msa0550430 | Msa1279210 | 0.802886 | 4.534736e-49 | -8.615850e-47 |
| Msa0550430 | Msa1282920 | 0.810095 | 1.366892e-50 | -8.615850e-47 |
| Msa0550430 | Msa1283860 | 0.811981 | 5.333749e-51 | -8.615850e-47 |
| Msa0550430 | Msa1284680 | 0.814298 | 1.654349e-51 | -8.615850e-47 |
| Msa0550430 | Msa1288420 | 0.811797 | 5.850077e-51 | -8.615850e-47 |
| Msa0550430 | Msa1289280 | 0.802426 | 5.643166e-49 | -8.615850e-47 |
| Msa0550430 | Msa1293280 | 0.817707 | 2.867441e-52 | -8.615850e-47 |
| Msa0550430 | Msa1293770 | 0.831968 | 1.235436e-55 | -8.615850e-47 |
| Msa0550430 | Msa1297090 | 0.814454 | 1.527846e-51 | -8.615850e-47 |
| Msa0550430 | Msa1300350 | -0.802574 | 5.259462e-49 | -8.615850e-47 |
| Msa0550430 | Msa1305340 | 0.809557 | 1.784060e-50 | -8.615850e-47 |
| Msa0550430 | Msa1306430 | 0.821888 | 3.178026e-53 | -8.615850e-47 |
| Msa0550430 | Msa1306840 | 0.803882 | 2.818965e-49 | -8.615850e-47 |
| Msa0550430 | Msa1308380 | 0.819742 | 9.896798e-53 | -8.615850e-47 |
| Msa0550430 | Msa1313140 | 0.806055 | 9.905494e-50 | -8.615850e-47 |
| Msa0550430 | Msa1314340 | 0.811726 | 6.059692e-51 | -8.615850e-47 |
| Msa0550430 | Msa1318240 | 0.802652 | 5.067810e-49 | -8.615850e-47 |
| Msa0550430 | Msa1318990 | 0.833278 | 5.844682e-56 | -8.615850e-47 |
| Msa0550430 | Msa1320620 | 0.812441 | 4.233767e-51 | -8.615850e-47 |
| Msa0550430 | Msa1322190 | 0.813220 | 2.857224e-51 | -8.615850e-47 |
| Msa0550430 | Msa1322890 | 0.810796 | 9.646156e-51 | -8.615850e-47 |
| Msa0550430 | Msa1324500 | 0.806309 | 8.758098e-50 | -8.615850e-47 |
| Msa0550430 | Msa1324550 | 0.809999 | 1.433076e-50 | -8.615850e-47 |
| Msa0550430 | Msa1327680 | 0.817777 | 2.766085e-52 | -8.615850e-47 |
| Msa0550430 | Msa1328700 | 0.801875 | 7.326260e-49 | -8.615850e-47 |
| Msa0550430 | Msa1336490 | 0.813096 | 3.043419e-51 | -8.615850e-47 |
| Msa0550430 | Msa1340020 | 0.801155 | 1.028840e-48 | -8.615850e-47 |
| Msa0550430 | Msa1340650 | 0.827566 | 1.457555e-54 | -8.615850e-47 |
| Msa0550430 | Msa1343760 | 0.800995 | 1.109620e-48 | -8.615850e-47 |
| Msa0550430 | Msa1343820 | 0.829014 | 6.523529e-55 | -8.615850e-47 |
| Msa0550430 | Msa1348950 | 0.810983 | 8.785461e-51 | -8.615850e-47 |
| Msa0550430 | Msa1357530 | 0.821777 | 3.371087e-53 | -8.615850e-47 |
| Msa0550430 | Msa1359040 | 0.807949 | 3.937584e-50 | -8.615850e-47 |
| Msa0550430 | Msa1360060 | 0.811733 | 6.041116e-51 | -8.615850e-47 |
| Msa0550430 | Msa1362880 | 0.801181 | 1.016539e-48 | -8.615850e-47 |
| Msa0550430 | Msa1367750 | 0.800521 | 1.386075e-48 | -8.615850e-47 |
| Msa0550430 | Msa1371430 | 0.808564 | 2.910565e-50 | -8.615850e-47 |
| Msa0550430 | Msa1372760 | 0.825719 | 4.021089e-54 | -8.615850e-47 |
| Msa0550430 | Msa1384350 | 0.825716 | 4.027357e-54 | -8.615850e-47 |
| Msa0550430 | Msa1389400 | 0.816069 | 6.687873e-52 | -8.615850e-47 |
| Msa0550430 | Msa1389830 | 0.808434 | 3.103843e-50 | -8.615850e-47 |
| Msa0550430 | Msa1390050 | 0.808172 | 3.528980e-50 | -8.615850e-47 |
| Msa0550430 | Msa1392260 | 0.800279 | 1.552526e-48 | -8.615850e-47 |
| Msa0550430 | Msa1393040 | 0.807336 | 5.311878e-50 | -8.615850e-47 |
| Msa0550430 | Msa1411020 | 0.807148 | 5.823185e-50 | -8.615850e-47 |
| Msa0550430 | Msa1414690 | 0.801261 | 9.789310e-49 | -8.615850e-47 |
| Msa0550430 | Msa1423450 | 0.847871 | 8.792267e-60 | -8.615850e-47 |
| Msa0550430 | Msa1423870 | 0.805337 | 1.401344e-49 | -8.615850e-47 |
| Msa0550430 | Msa1424290 | 0.808426 | 3.115584e-50 | -8.615850e-47 |
| Msa0550430 | Msa1424450 | 0.813232 | 2.841182e-51 | -8.615850e-47 |
| Msa0550430 | Msa1434350 | 0.809579 | 1.764862e-50 | -8.615850e-47 |
| Msa0550430 | Msa1439320 | 0.813883 | 2.042821e-51 | -8.615850e-47 |
| Msa0550430 | Msa1443290 | -0.801947 | 7.080455e-49 | -8.615850e-47 |
| Msa0550430 | Msa1449820 | 0.816748 | 4.711809e-52 | -8.615850e-47 |
| Msa0550430 | Msa1452240 | 0.813609 | 2.346870e-51 | -8.615850e-47 |
| Msa0550430 | Msa1453080 | 0.814665 | 1.372190e-51 | -8.615850e-47 |
| Msa0550430 | Msa1454120 | 0.814408 | 1.563950e-51 | -8.615850e-47 |
| Msa0550430 | Msa1460830 | 0.804227 | 2.390197e-49 | -8.615850e-47 |
| Msa0550430 | Msa1461280 | 0.817805 | 2.726045e-52 | -8.615850e-47 |
| Msa0550430 | Msa1464940 | 0.813779 | 2.153946e-51 | -8.615850e-47 |
| Msa0550430 | Msa1466300 | 0.811293 | 7.528567e-51 | -8.615850e-47 |
| Msa0550430 | Msa1466540 | 0.805883 | 1.076525e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0550430 | MtrunA17_Chr4g0035281 | 88.166 | 169 | 19 | 1 | 46 | 213 | 1 | 169 | 1.75e-100 | 296 |
| Msa0550430 | MtrunA17_Chr4g0035291 | 73.953 | 215 | 52 | 4 | 1 | 213 | 1 | 213 | 3.70e-87 | 264 |
| Msa0550430 | MtrunA17_Chr4g0035301 | 70.667 | 225 | 54 | 6 | 1 | 213 | 1 | 225 | 3.04e-86 | 262 |
| Msa0550430 | MtrunA17_Chr5g0434771 | 60.194 | 103 | 41 | 0 | 291 | 393 | 21 | 123 | 7.91e-35 | 127 |
| Msa0550430 | MtrunA17_Chr3g0138811 | 40.698 | 172 | 58 | 2 | 287 | 415 | 218 | 388 | 8.77e-33 | 127 |
| Msa0550430 | MtrunA17_Chr6g0455061 | 36.255 | 251 | 105 | 9 | 9 | 211 | 10 | 253 | 1.94e-29 | 115 |
| Msa0550430 | MtrunA17_Chr3g0144851 | 38.000 | 250 | 99 | 11 | 9 | 209 | 10 | 252 | 2.34e-26 | 107 |
| Msa0550430 | MtrunA17_Chr5g0426971 | 49.515 | 103 | 52 | 0 | 288 | 390 | 93 | 195 | 3.37e-24 | 100 |
| Msa0550430 | MtrunA17_Chr5g0445181 | 46.729 | 107 | 49 | 3 | 284 | 390 | 199 | 297 | 3.14e-20 | 90.5 |
| Msa0550430 | MtrunA17_Chr8g0353971 | 42.308 | 104 | 59 | 1 | 288 | 390 | 4 | 107 | 5.93e-20 | 87.0 |
| Msa0550430 | MtrunA17_Chr8g0353941 | 40.566 | 106 | 62 | 1 | 288 | 392 | 14 | 119 | 8.03e-20 | 86.7 |
| Msa0550430 | MtrunA17_Chr2g0314471 | 43.966 | 116 | 61 | 4 | 282 | 393 | 230 | 345 | 2.77e-16 | 80.5 |
| Msa0550430 | MtrunA17_Chr2g0314451 | 42.241 | 116 | 63 | 4 | 282 | 393 | 229 | 344 | 1.17e-15 | 78.6 |
| Msa0550430 | MtrunA17_Chr8g0368281 | 39.552 | 134 | 69 | 5 | 271 | 399 | 7 | 133 | 4.45e-15 | 73.6 |
| Msa0550430 | MtrunA17_Chr8g0368201 | 40.171 | 117 | 66 | 2 | 282 | 394 | 142 | 258 | 9.60e-15 | 74.7 |
| Msa0550430 | MtrunA17_Chr8g0368241 | 42.241 | 116 | 62 | 4 | 283 | 393 | 237 | 352 | 1.88e-14 | 74.7 |
| Msa0550430 | MtrunA17_Chr2g0314461 | 41.026 | 117 | 65 | 4 | 281 | 393 | 229 | 345 | 3.14e-14 | 73.9 |
| Msa0550430 | MtrunA17_Chr8g0368181 | 37.931 | 116 | 68 | 3 | 282 | 393 | 16 | 131 | 6.43e-13 | 67.4 |
| Msa0550430 | MtrunA17_Chr8g0368361 | 35.345 | 116 | 71 | 3 | 282 | 393 | 16 | 131 | 1.87e-12 | 65.9 |
| Msa0550430 | MtrunA17_Chr8g0368161 | 35.156 | 128 | 76 | 4 | 271 | 393 | 261 | 386 | 3.82e-12 | 67.8 |
| Msa0550430 | MtrunA17_Chr1g0189961 | 31.250 | 128 | 81 | 4 | 271 | 393 | 264 | 389 | 7.32e-12 | 67.0 |
| Msa0550430 | MtrunA17_Chr8g0368381 | 35.227 | 88 | 55 | 2 | 287 | 372 | 21 | 108 | 1.48e-11 | 61.6 |
| Msa0550430 | MtrunA17_Chr8g0368291 | 27.922 | 154 | 98 | 4 | 210 | 362 | 166 | 307 | 5.91e-11 | 63.9 |
| Msa0550430 | MtrunA17_Chr3g0129891 | 37.302 | 126 | 67 | 5 | 282 | 400 | 206 | 326 | 7.39e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0550430 | AT5G66440.1 | 31.557 | 244 | 128 | 9 | 1 | 211 | 1 | 238 | 1.82e-16 | 79.3 |
| Msa0550430 | AT2G35250.1 | 38.532 | 109 | 66 | 1 | 283 | 390 | 167 | 275 | 1.73e-15 | 77.8 |
| Msa0550430 | AT4G23350.1 | 39.394 | 99 | 57 | 1 | 295 | 390 | 239 | 337 | 3.56e-14 | 74.3 |
| Msa0550430 | AT3G48230.1 | 36.937 | 111 | 65 | 3 | 288 | 393 | 201 | 311 | 5.25e-14 | 73.6 |
| Msa0550430 | AT2G44240.1 | 36.207 | 116 | 70 | 3 | 282 | 393 | 224 | 339 | 6.06e-14 | 73.6 |
| Msa0550430 | AT2G27320.1 | 34.211 | 114 | 73 | 2 | 283 | 394 | 172 | 285 | 1.37e-13 | 72.0 |
| Msa0550430 | AT4G23370.1 | 37.037 | 108 | 64 | 2 | 287 | 390 | 228 | 335 | 2.59e-13 | 71.6 |
| Msa0550430 | AT4G23390.1 | 39.252 | 107 | 62 | 1 | 287 | 390 | 227 | 333 | 5.93e-13 | 70.5 |
| Msa0550430 | AT4G17505.1 | 36.364 | 110 | 64 | 2 | 288 | 396 | 160 | 264 | 1.03e-12 | 69.3 |
| Msa0550430 | AT4G23355.1 | 34.653 | 101 | 63 | 1 | 293 | 390 | 235 | 335 | 1.60e-12 | 69.3 |
| Msa0550430 | AT4G23360.1 | 35.644 | 101 | 62 | 1 | 293 | 390 | 236 | 336 | 2.00e-12 | 68.9 |
| Msa0550430 | AT2G44220.1 | 39.640 | 111 | 62 | 4 | 288 | 393 | 230 | 340 | 2.19e-12 | 68.9 |
| Msa0550430 | AT2G20170.3 | 34.091 | 176 | 105 | 5 | 222 | 390 | 144 | 315 | 4.58e-12 | 67.8 |
| Msa0550430 | AT4G23365.1 | 34.653 | 101 | 63 | 1 | 293 | 390 | 235 | 335 | 5.02e-12 | 67.8 |
| Msa0550430 | AT5G46200.1 | 37.864 | 103 | 61 | 2 | 295 | 394 | 244 | 346 | 2.58e-11 | 65.5 |
| Msa0550430 | AT2G20170.1 | 39.450 | 109 | 62 | 2 | 286 | 390 | 224 | 332 | 3.70e-11 | 65.1 |
| Msa0550430 | AT2G20170.2 | 39.450 | 109 | 62 | 2 | 286 | 390 | 224 | 332 | 3.70e-11 | 65.1 |
| Msa0550430 | AT2G44210.2 | 34.884 | 129 | 76 | 4 | 271 | 393 | 257 | 383 | 5.41e-11 | 64.7 |
| Msa0550430 | AT4G17860.1 | 33.846 | 130 | 78 | 4 | 262 | 390 | 165 | 287 | 6.57e-11 | 63.9 |
| Msa0550430 | AT2G44210.1 | 37.500 | 104 | 61 | 3 | 271 | 372 | 227 | 328 | 7.11e-11 | 64.3 |
Find 78 sgRNAs with CRISPR-Local
Find 255 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTGGCAAAACATCTATTTA+TGG | 0.186191 | 4_1:+45889210 | Msa0550430:CDS |
| ACTAATGAAAATGAGATTAT+TGG | 0.194073 | 4_1:+45889393 | Msa0550430:CDS |
| GCTAGCAAAGAAAACTATTT+TGG | 0.203054 | 4_1:+45889180 | Msa0550430:CDS |
| GTTGGATGTTCTCTTCAATT+TGG | 0.222215 | 4_1:+45889883 | Msa0550430:CDS |
| TCATCATATTCTTGTTCATT+TGG | 0.284360 | 4_1:-45885699 | None:intergenic |
| GTCTCGGATGAGGTTATCTT+TGG | 0.284768 | 4_1:-45887868 | None:intergenic |
| AATCGGATTATCTATTATTC+AGG | 0.288000 | 4_1:+45889248 | Msa0550430:CDS |
| CCCTTCGAATCCTCTGTTCT+TGG | 0.292673 | 4_1:-45886042 | None:intergenic |
| CATGTGAATTTCGGTGAATT+AGG | 0.293244 | 4_1:+45888820 | Msa0550430:CDS |
| CGTTGAAGTTTGTGTCGTTT+TGG | 0.324169 | 4_1:+45885518 | Msa0550430:CDS |
| GCGTTGTTCGCTCAAGGTTC+TGG | 0.336278 | 4_1:+45885666 | Msa0550430:CDS |
| GATGGTAGTAAAGTTGAAAA+AGG | 0.340575 | 4_1:+45885783 | Msa0550430:CDS |
| CCAGAACCTGTTGGTGGACT+AGG | 0.341990 | 4_1:-45889501 | None:intergenic |
| CCTAGTCCACCAACAGGTTC+TGG | 0.353457 | 4_1:+45889501 | Msa0550430:CDS |
| TAGCATTGCCTTTCTCAGTT+TGG | 0.357534 | 4_1:-45885449 | None:intergenic |
| ATCCGGAAGCATGTGAATTT+CGG | 0.373271 | 4_1:+45888811 | Msa0550430:CDS |
| CACCGAAATTCACATGCTTC+CGG | 0.377346 | 4_1:-45888813 | None:intergenic |
| GGATGTTCTCTTCAATTTGG+AGG | 0.415274 | 4_1:+45889886 | Msa0550430:CDS |
| CTCGTTGCTCATCTTATCCT+CGG | 0.416320 | 4_1:-45885988 | None:intergenic |
| TTTAATCTCCAAACTGAGAA+AGG | 0.417953 | 4_1:+45885441 | Msa0550430:CDS |
| GGGTGAAGAAGAGTTATAGA+AGG | 0.421833 | 4_1:+45885838 | Msa0550430:CDS |
| CTTTGAGGAATGGAGTCGTT+CGG | 0.425044 | 4_1:+45885417 | None:intergenic |
| TCTCTTCAATTTGGAGGGCT+AGG | 0.428600 | 4_1:+45889892 | Msa0550430:CDS |
| TGATGATATTTATGAGAAGT+TGG | 0.432187 | 4_1:+45885716 | Msa0550430:CDS |
| AAAGAGAAAATAAGAAAAGA+TGG | 0.439369 | 4_1:+45885765 | Msa0550430:CDS |
| AGGATCCTCGAACAAAAGAT+TGG | 0.445048 | 4_1:+45889364 | Msa0550430:intron |
| CTTGAGTTTCTTACTGCAAC+CGG | 0.445540 | 4_1:-45885570 | None:intergenic |
| AGTAGGATGGAGATGAAGGA+AGG | 0.446730 | 4_1:+45889857 | Msa0550430:intron |
| AAGAAGAGTTATAGAAGGTG+TGG | 0.448280 | 4_1:+45885843 | Msa0550430:CDS |
| ATCATCGCTAAAAGCGTAAA+GGG | 0.452874 | 4_1:-45888919 | None:intergenic |
| TAAAACATTTGAAGCTTCAA+AGG | 0.454977 | 4_1:+45885475 | Msa0550430:CDS |
| GGTGGAGACATGATCGAAAT+CGG | 0.462588 | 4_1:+45889231 | Msa0550430:CDS |
| CAGAACCTGTTGGTGGACTA+GGG | 0.471491 | 4_1:-45889500 | None:intergenic |
| ACATTGTAAATTGTAGCATT+CGG | 0.475916 | 4_1:-45889142 | None:intergenic |
| GATGTTCTCTTCAATTTGGA+GGG | 0.478756 | 4_1:+45889887 | Msa0550430:CDS |
| TCCTCCTCAGCAACATGAGC+AGG | 0.482114 | 4_1:-45885942 | None:intergenic |
| AGGAACAGAAAATGAAAAGA+GGG | 0.491844 | 4_1:+45885817 | Msa0550430:CDS |
| AAAACATTTGAAGCTTCAAA+GGG | 0.497511 | 4_1:+45885476 | Msa0550430:CDS |
| TTGCTAGCTTGAACAATACC+TGG | 0.497534 | 4_1:-45889165 | None:intergenic |
| AACAATATCGTGTGTTGCGA+AGG | 0.499204 | 4_1:+45885883 | Msa0550430:CDS |
| TGGTAGAACATCAATATCTA+CGG | 0.503005 | 4_1:+45889473 | Msa0550430:CDS |
| ACGCCATCCTACTTGATTCG+TGG | 0.505121 | 4_1:-45889451 | None:intergenic |
| AATCATCGCTAAAAGCGTAA+AGG | 0.507315 | 4_1:-45888920 | None:intergenic |
| ATCATTGCGTTGTTCGCTCA+AGG | 0.511023 | 4_1:+45885660 | Msa0550430:CDS |
| GCTAAGTAGGATGGAGATGA+AGG | 0.516818 | 4_1:+45889853 | Msa0550430:intron |
| GGATCCTCGAACAAAAGATT+GGG | 0.521628 | 4_1:+45889365 | Msa0550430:intron |
| CCTAAGTCAATAGCATAAAA+CGG | 0.522809 | 4_1:-45888871 | None:intergenic |
| AATGCTTTCTATGAAACTAC+CGG | 0.524823 | 4_1:+45885551 | Msa0550430:CDS |
| TGCTACAATTTACAATGTCC+AGG | 0.525880 | 4_1:+45889147 | Msa0550430:CDS |
| AAATTGATTTGTCTCGGATG+AGG | 0.525914 | 4_1:-45887878 | None:intergenic |
| AGAAGAGTTATAGAAGGTGT+GGG | 0.529717 | 4_1:+45885844 | Msa0550430:CDS |
| TAGGATGGAGATGAAGGAAG+GGG | 0.531150 | 4_1:+45889859 | Msa0550430:intron |
| GGTTCCCCTAGTCCACCAAC+AGG | 0.542003 | 4_1:+45889495 | Msa0550430:CDS |
| GGCAAAACATCTATTTATGG+TGG | 0.543325 | 4_1:+45889213 | Msa0550430:CDS |
| AGGATGGAGATGAAGGAAGG+GGG | 0.543997 | 4_1:+45889860 | Msa0550430:intron |
| GTAGGATGGAGATGAAGGAA+GGG | 0.555172 | 4_1:+45889858 | Msa0550430:intron |
| TCGTTGCTCATCTTATCCTC+GGG | 0.557561 | 4_1:-45885987 | None:intergenic |
| CTTCAATTTGGAGGGCTAGG+AGG | 0.562222 | 4_1:+45889895 | Msa0550430:CDS |
| ACCTGCTCATGTTGCTGAGG+AGG | 0.563502 | 4_1:+45885941 | Msa0550430:CDS |
| GCCAAGAACAGAGGATTCGA+AGG | 0.577542 | 4_1:+45886041 | Msa0550430:CDS |
| GAGGAACAGAAAATGAAAAG+AGG | 0.591068 | 4_1:+45885816 | Msa0550430:CDS |
| GGTAGAACATCAATATCTAC+GGG | 0.593468 | 4_1:+45889474 | Msa0550430:CDS |
| AAATGTCCAGAACCTGTTGG+TGG | 0.595541 | 4_1:-45889507 | None:intergenic |
| GGATGGAGATGAAGGAAGGG+GGG | 0.597137 | 4_1:+45889861 | Msa0550430:intron |
| TGAACCTGCTCATGTTGCTG+AGG | 0.604362 | 4_1:+45885938 | Msa0550430:CDS |
| GTGAGAGTGAGAACAATGGA+AGG | 0.605246 | 4_1:+45885907 | Msa0550430:CDS |
| GGAGGGCTAGGAGGAAAATG+TGG | 0.609631 | 4_1:+45889904 | Msa0550430:CDS |
| GGAACAGAAAATGAAAAGAG+GGG | 0.621205 | 4_1:+45885818 | Msa0550430:CDS |
| GGAGTTTCGTCATACTGTAG+AGG | 0.623410 | 4_1:+45886010 | Msa0550430:CDS |
| TTGACGTCCACGAATCAAGT+AGG | 0.624567 | 4_1:+45889444 | Msa0550430:CDS |
| ACGAATCAAGTAGGATGGCG+TGG | 0.640093 | 4_1:+45889453 | Msa0550430:CDS |
| AGAACCTGTTGGTGGACTAG+GGG | 0.641601 | 4_1:-45889499 | None:intergenic |
| CGTCCACGAATCAAGTAGGA+TGG | 0.642880 | 4_1:+45889448 | Msa0550430:CDS |
| ATAAAATGTCCAGAACCTGT+TGG | 0.643416 | 4_1:-45889510 | None:intergenic |
| CTGAGGAGGAAATGATTGTG+AGG | 0.655278 | 4_1:+45885955 | Msa0550430:CDS |
| AGGTGTGAGAGTGAGAACAA+TGG | 0.658068 | 4_1:+45885903 | Msa0550430:CDS |
| CCAAGAACAGAGGATTCGAA+GGG | 0.673002 | 4_1:+45886042 | Msa0550430:CDS |
| CGAGGATAAGATGAGCAACG+AGG | 0.729895 | 4_1:+45885989 | Msa0550430:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATTATTGTAGAAATTTTT+TGG | - | chr4_1:45889285-45889304 | None:intergenic | 10.0% |
| !!! | CATTATTTTGTTTTTCTTAT+CGG | + | chr4_1:45885627-45885646 | Msa0550430:CDS | 15.0% |
| !! | ATATACCTATCAAATTTAAA+TGG | + | chr4_1:45887951-45887970 | Msa0550430:intron | 15.0% |
| !! | ATATAATCTTATTATGGATT+TGG | + | chr4_1:45888019-45888038 | Msa0550430:intron | 15.0% |
| !!! | ATCAAACACAAATAAATTTT+TGG | - | chr4_1:45888222-45888241 | None:intergenic | 15.0% |
| !! | TGATTTACTAATTTGATATT+AGG | + | chr4_1:45888238-45888257 | Msa0550430:intron | 15.0% |
| !! | TGAATTTATAAACTCAAAAT+TGG | - | chr4_1:45888351-45888370 | None:intergenic | 15.0% |
| !!! | TCAATATTTCTTTTCATTTA+AGG | + | chr4_1:45888419-45888438 | Msa0550430:intron | 15.0% |
| !! | TTATTTAGATTGAAAGAAAA+GGG | - | chr4_1:45888602-45888621 | None:intergenic | 15.0% |
| !! | CGATAAGAAAAACAAAATAA+TGG | - | chr4_1:45885629-45885648 | None:intergenic | 20.0% |
| !! | AAAGAGAAAATAAGAAAAGA+TGG | + | chr4_1:45885765-45885784 | Msa0550430:CDS | 20.0% |
| !! | GAAGATTAACTAATCATATT+TGG | + | chr4_1:45886070-45886089 | Msa0550430:intron | 20.0% |
| !!! | GAAATTAACAACAACTTTTT+TGG | + | chr4_1:45886974-45886993 | Msa0550430:intron | 20.0% |
| !!! | TTTGTTTTACAAGATTATTG+AGG | + | chr4_1:45887295-45887314 | Msa0550430:intron | 20.0% |
| !!! | TTGTTTTACAAGATTATTGA+GGG | + | chr4_1:45887296-45887315 | Msa0550430:intron | 20.0% |
| !!! | AGATCTAGAACTTATTAATA+AGG | + | chr4_1:45887426-45887445 | Msa0550430:intron | 20.0% |
| !! | AACTTATGATTCATAAGTAA+AGG | - | chr4_1:45887639-45887658 | None:intergenic | 20.0% |
| !!! | ACTTATGAATCATAAGTTTT+AGG | + | chr4_1:45887641-45887660 | Msa0550430:intron | 20.0% |
| !! | GTTTGAAAAATTCATCAATT+AGG | + | chr4_1:45887785-45887804 | Msa0550430:intron | 20.0% |
| !!! | GATTAAAAATTGATTTGTCT+CGG | - | chr4_1:45887887-45887906 | None:intergenic | 20.0% |
| !!! | AGACAAATCAATTTTTAATC+AGG | + | chr4_1:45887887-45887906 | Msa0550430:CDS | 20.0% |
| !! | AACTACCATTTAAATTTGAT+AGG | - | chr4_1:45887959-45887978 | None:intergenic | 20.0% |
| !! | TTTACTAATTTGATATTAGG+TGG | + | chr4_1:45888241-45888260 | Msa0550430:intron | 20.0% |
| !! | ATTGGAAGAAGAAATAAAAT+GGG | - | chr4_1:45888333-45888352 | None:intergenic | 20.0% |
| !! | AATTGGAAGAAGAAATAAAA+TGG | - | chr4_1:45888334-45888353 | None:intergenic | 20.0% |
| !! | CTTATTTAGATTGAAAGAAA+AGG | - | chr4_1:45888603-45888622 | None:intergenic | 20.0% |
| !! | TTTCTTTCAATCTAAATAAG+TGG | + | chr4_1:45888603-45888622 | Msa0550430:intron | 20.0% |
| !!! | GGTTTTATCATATTATTTGT+AGG | + | chr4_1:45888841-45888860 | Msa0550430:CDS | 20.0% |
| !! | ATATATTGAAGTTATGAAAC+TGG | - | chr4_1:45889010-45889029 | None:intergenic | 20.0% |
| !! | ATAAAATATGACGTTGAAAA+CGG | + | chr4_1:45889096-45889115 | Msa0550430:intron | 20.0% |
| !! | ACTAATGAAAATGAGATTAT+TGG | + | chr4_1:45889393-45889412 | Msa0550430:CDS | 20.0% |
| !!! | TTTTCATTGATCAAAAACAA+TGG | - | chr4_1:45889690-45889709 | None:intergenic | 20.0% |
| !!! | TTTTTCAGAGATAAAAAATG+TGG | + | chr4_1:45889934-45889953 | Msa0550430:CDS | 20.0% |
| !! | TTGAAGCTTCAAATGTTTTA+GGG | - | chr4_1:45885475-45885494 | None:intergenic | 25.0% |
| !!! | TTTGAAGCTTCAAATGTTTT+AGG | - | chr4_1:45885476-45885495 | None:intergenic | 25.0% |
| !! | TAAAACATTTGAAGCTTCAA+AGG | + | chr4_1:45885475-45885494 | Msa0550430:CDS | 25.0% |
| !! | AAAACATTTGAAGCTTCAAA+GGG | + | chr4_1:45885476-45885495 | Msa0550430:CDS | 25.0% |
| ! | TCATCATATTCTTGTTCATT+TGG | - | chr4_1:45885702-45885721 | None:intergenic | 25.0% |
| ! | TGATGATATTTATGAGAAGT+TGG | + | chr4_1:45885716-45885735 | Msa0550430:CDS | 25.0% |
| ! | AACAATTAAGTAGCTCAATA+TGG | + | chr4_1:45886214-45886233 | Msa0550430:intron | 25.0% |
| ! | ATCCATTCCTATATTAGAAT+TGG | + | chr4_1:45886546-45886565 | Msa0550430:intron | 25.0% |
| ! | GATTAAAGTTTGCAAAATTG+TGG | + | chr4_1:45886623-45886642 | Msa0550430:intron | 25.0% |
| ! | AAAACAGTAAAAAACTAGTG+AGG | + | chr4_1:45886952-45886971 | Msa0550430:intron | 25.0% |
| !! | TTATTCCATCCTACAAATTT+TGG | + | chr4_1:45887216-45887235 | Msa0550430:intron | 25.0% |
| !! | TATTCCATCCTACAAATTTT+GGG | + | chr4_1:45887217-45887236 | Msa0550430:intron | 25.0% |
| !! | TGTTTTACAAGATTATTGAG+GGG | + | chr4_1:45887297-45887316 | Msa0550430:intron | 25.0% |
| !! | GACTATTCTTTTCATGTTTT+TGG | + | chr4_1:45887333-45887352 | Msa0550430:intron | 25.0% |
| !!! | TATTCTTTTCATGTTTTTGG+TGG | + | chr4_1:45887336-45887355 | Msa0550430:intron | 25.0% |
| ! | TAATACATGAATACTCTTGA+CGG | - | chr4_1:45887454-45887473 | None:intergenic | 25.0% |
| ! | TTGAACTTAATCTTACTACA+TGG | + | chr4_1:45887510-45887529 | Msa0550430:intron | 25.0% |
| !!! | TCTGATTTTATTTTGAAAGC+TGG | - | chr4_1:45887759-45887778 | None:intergenic | 25.0% |
| ! | TTCATCAATTAGGCTATATT+TGG | + | chr4_1:45887795-45887814 | Msa0550430:intron | 25.0% |
| ! | AAATAGTTCATGTTGGATAT+TGG | - | chr4_1:45887833-45887852 | None:intergenic | 25.0% |
| ! | TAATCTTATTATGGATTTGG+AGG | + | chr4_1:45888022-45888041 | Msa0550430:intron | 25.0% |
| ! | AGATCAACAAATTGAAACTT+AGG | - | chr4_1:45888159-45888178 | None:intergenic | 25.0% |
| !!! | ATTTTTGGTGTGAAAACTAT+TGG | - | chr4_1:45888207-45888226 | None:intergenic | 25.0% |
| ! | TCATCATCGTTGTATAATTA+TGG | - | chr4_1:45888269-45888288 | None:intergenic | 25.0% |
| !!! | TACCTTTTTCAGTATCATTA+TGG | + | chr4_1:45888377-45888396 | Msa0550430:intron | 25.0% |
| ! | AACCATAATGATACTGAAAA+AGG | - | chr4_1:45888382-45888401 | None:intergenic | 25.0% |
| !!! | GTGAAGCACTAAATTTTTTT+TGG | - | chr4_1:45888460-45888479 | None:intergenic | 25.0% |
| ! | TACAAATTCAACCAATGATT+TGG | + | chr4_1:45888773-45888792 | Msa0550430:intron | 25.0% |
| ! | ACAAATTCAACCAATGATTT+GGG | + | chr4_1:45888774-45888793 | Msa0550430:intron | 25.0% |
| ! | ATTGTATCTAATGTACTCTA+TGG | + | chr4_1:45888940-45888959 | Msa0550430:intron | 25.0% |
| ! | ACATTGTAAATTGTAGCATT+CGG | - | chr4_1:45889145-45889164 | None:intergenic | 25.0% |
| ! | TTTGGCAAAACATCTATTTA+TGG | + | chr4_1:45889210-45889229 | Msa0550430:CDS | 25.0% |
| ! | AATCGGATTATCTATTATTC+AGG | + | chr4_1:45889248-45889267 | Msa0550430:CDS | 25.0% |
| !!! | TATAATTTGTTGATGTATCC+AGG | + | chr4_1:45889344-45889363 | Msa0550430:intron | 25.0% |
| ! | ATCAATGAAAAGAGAGAAAA+AGG | + | chr4_1:45889699-45889718 | Msa0550430:intron | 25.0% |
| ! | TCATCAAAGTTGTTAACAAA+TGG | + | chr4_1:45889728-45889747 | Msa0550430:intron | 25.0% |
| TTTAATCTCCAAACTGAGAA+AGG | + | chr4_1:45885441-45885460 | Msa0550430:CDS | 30.0% | |
| AATGCTTTCTATGAAACTAC+CGG | + | chr4_1:45885551-45885570 | Msa0550430:CDS | 30.0% | |
| GATGGTAGTAAAGTTGAAAA+AGG | + | chr4_1:45885783-45885802 | Msa0550430:CDS | 30.0% | |
| AGGAACAGAAAATGAAAAGA+GGG | + | chr4_1:45885817-45885836 | Msa0550430:CDS | 30.0% | |
| AATTAAGTAGCTCAATATGG+CGG | + | chr4_1:45886217-45886236 | Msa0550430:intron | 30.0% | |
| AGCCAATTCTAATATAGGAA+TGG | - | chr4_1:45886551-45886570 | None:intergenic | 30.0% | |
| ! | TGGAACAACTTTTCTGAATT+GGG | - | chr4_1:45886577-45886596 | None:intergenic | 30.0% |
| ACACACACACAAAATTATTG+TGG | + | chr4_1:45886735-45886754 | Msa0550430:intron | 30.0% | |
| GTAATGTTCCCAAAATTTGT+AGG | - | chr4_1:45887228-45887247 | None:intergenic | 30.0% | |
| AAAACAAAGTGACTCAATGA+TGG | - | chr4_1:45887283-45887302 | None:intergenic | 30.0% | |
| TTTGGGTACTATCAATTTGA+CGG | - | chr4_1:45887375-45887394 | None:intergenic | 30.0% | |
| CTTCTCTTTCACTATGATTT+GGG | - | chr4_1:45887392-45887411 | None:intergenic | 30.0% | |
| ACTTCTCTTTCACTATGATT+TGG | - | chr4_1:45887393-45887412 | None:intergenic | 30.0% | |
| AATCATAGTGAAAGAGAAGT+TGG | + | chr4_1:45887393-45887412 | Msa0550430:intron | 30.0% | |
| ACAATGTATCCAAATTTGTC+TGG | - | chr4_1:45887570-45887589 | None:intergenic | 30.0% | |
| AGTAAAGGATGATCAAAAGT+CGG | - | chr4_1:45887624-45887643 | None:intergenic | 30.0% | |
| CTAAACGAAATAGTTCATGT+TGG | - | chr4_1:45887840-45887859 | None:intergenic | 30.0% | |
| CAACATGAACTATTTCGTTT+AGG | + | chr4_1:45887838-45887857 | Msa0550430:intron | 30.0% | |
| !!! | GTGATAAACAAGAGCATTTT+TGG | - | chr4_1:45887919-45887938 | None:intergenic | 30.0% |
| AAACTCATTTGTTTGCAGTA+TGG | + | chr4_1:45888288-45888307 | Msa0550430:intron | 30.0% | |
| ! | AAGAAAGTTTAGAGTGAAGT+TGG | - | chr4_1:45888505-45888524 | None:intergenic | 30.0% |
| AAAGGGAAAAAAGATGTAGA+GGG | - | chr4_1:45888585-45888604 | None:intergenic | 30.0% | |
| AAAAGGGAAAAAAGATGTAG+AGG | - | chr4_1:45888586-45888605 | None:intergenic | 30.0% | |
| CCTAAGTCAATAGCATAAAA+CGG | - | chr4_1:45888874-45888893 | None:intergenic | 30.0% | |
| ! | GCTAGCAAAGAAAACTATTT+TGG | + | chr4_1:45889180-45889199 | Msa0550430:CDS | 30.0% |
| !! | AGCAAAGAAAACTATTTTGG+TGG | + | chr4_1:45889183-45889202 | Msa0550430:CDS | 30.0% |
| TGGTAGAACATCAATATCTA+CGG | + | chr4_1:45889473-45889492 | Msa0550430:CDS | 30.0% | |
| ! | CATTTTATCGACGATGTATT+CGG | + | chr4_1:45889525-45889544 | Msa0550430:intron | 30.0% |
| AAAACAATGGAGAGAGAAAA+AGG | - | chr4_1:45889677-45889696 | None:intergenic | 30.0% | |
| AATGAAAAGAGAGAAAAAGG+AGG | + | chr4_1:45889702-45889721 | Msa0550430:intron | 30.0% | |
| !! | AATGCCTCTAGAATAGATTA+AGG | + | chr4_1:45889778-45889797 | Msa0550430:intron | 30.0% |
| AAGTCCTTAATCTATTCTAG+AGG | - | chr4_1:45889785-45889804 | None:intergenic | 30.0% | |
| TACTTAGCAGAAAGGTAATT+AGG | - | chr4_1:45889841-45889860 | None:intergenic | 30.0% | |
| TAATTACCTTTCTGCTAAGT+AGG | + | chr4_1:45889840-45889859 | Msa0550430:intron | 30.0% | |
| GAGGAACAGAAAATGAAAAG+AGG | + | chr4_1:45885816-45885835 | Msa0550430:CDS | 35.0% | |
| GGAACAGAAAATGAAAAGAG+GGG | + | chr4_1:45885818-45885837 | Msa0550430:CDS | 35.0% | |
| AAGAAGAGTTATAGAAGGTG+TGG | + | chr4_1:45885843-45885862 | Msa0550430:CDS | 35.0% | |
| ! | AGAAGAGTTATAGAAGGTGT+GGG | + | chr4_1:45885844-45885863 | Msa0550430:CDS | 35.0% |
| ! | GAGCTACTTAATTGTTTCTC+AGG | - | chr4_1:45886210-45886229 | None:intergenic | 35.0% |
| AGTCAATATCGATGAGTGTA+AGG | + | chr4_1:45886290-45886309 | Msa0550430:intron | 35.0% | |
| GTATATACGAGGAGGATTAA+GGG | + | chr4_1:45886360-45886379 | Msa0550430:intron | 35.0% | |
| AATCAAGACAATGCAATGTG+AGG | - | chr4_1:45886446-45886465 | None:intergenic | 35.0% | |
| TATAGGAATGGATCACTCTA+AGG | - | chr4_1:45886539-45886558 | None:intergenic | 35.0% | |
| GGTCAAGCCAATTCTAATAT+AGG | - | chr4_1:45886556-45886575 | None:intergenic | 35.0% | |
| ! | GTGGAACAACTTTTCTGAAT+TGG | - | chr4_1:45886578-45886597 | None:intergenic | 35.0% |
| TTCCACAATCCATTAGTTGA+AGG | + | chr4_1:45886592-45886611 | Msa0550430:intron | 35.0% | |
| TCCACAATCCATTAGTTGAA+GGG | + | chr4_1:45886593-45886612 | Msa0550430:intron | 35.0% | |
| TCATGGTGAATTATGTGTGT+GGG | - | chr4_1:45887128-45887147 | None:intergenic | 35.0% | |
| CTAAATGTACACTATGATGC+AGG | + | chr4_1:45887179-45887198 | Msa0550430:intron | 35.0% | |
| TGTTCCCAAAATTTGTAGGA+TGG | - | chr4_1:45887224-45887243 | None:intergenic | 35.0% | |
| TTGGGTACTATCAATTTGAC+GGG | - | chr4_1:45887374-45887393 | None:intergenic | 35.0% | |
| ATGGTTTCTCCAGACAAATT+TGG | + | chr4_1:45887558-45887577 | Msa0550430:intron | 35.0% | |
| !! | GGCTATATTTGGTCTTAAGA+AGG | + | chr4_1:45887806-45887825 | Msa0550430:intron | 35.0% |
| CATGAACTATTTCGTTTAGG+AGG | + | chr4_1:45887841-45887860 | Msa0550430:intron | 35.0% | |
| !! | AAATTGATTTGTCTCGGATG+AGG | - | chr4_1:45887881-45887900 | None:intergenic | 35.0% |
| ! | GAAACTTAGGTGTCATCTAA+AGG | - | chr4_1:45888146-45888165 | None:intergenic | 35.0% |
| TCATTTGTTTGCAGTATGGA+TGG | + | chr4_1:45888292-45888311 | Msa0550430:intron | 35.0% | |
| AAGGGAAAAAAGATGTAGAG+GGG | - | chr4_1:45888584-45888603 | None:intergenic | 35.0% | |
| ACTGATGTCGATCTTTCAAT+AGG | - | chr4_1:45888749-45888768 | None:intergenic | 35.0% | |
| CATGTGAATTTCGGTGAATT+AGG | + | chr4_1:45888820-45888839 | Msa0550430:CDS | 35.0% | |
| !!! | CCGTTTTATGCTATTGACTT+AGG | + | chr4_1:45888871-45888890 | Msa0550430:CDS | 35.0% |
| ! | ATCATCGCTAAAAGCGTAAA+GGG | - | chr4_1:45888922-45888941 | None:intergenic | 35.0% |
| ! | AATCATCGCTAAAAGCGTAA+AGG | - | chr4_1:45888923-45888942 | None:intergenic | 35.0% |
| TCTTCTTGAAATTATCTGCC+TGG | - | chr4_1:45889122-45889141 | None:intergenic | 35.0% | |
| TGCTACAATTTACAATGTCC+AGG | + | chr4_1:45889147-45889166 | Msa0550430:CDS | 35.0% | |
| !!! | AACTATTTTGGTGGACGATT+TGG | + | chr4_1:45889192-45889211 | Msa0550430:CDS | 35.0% |
| GGCAAAACATCTATTTATGG+TGG | + | chr4_1:45889213-45889232 | Msa0550430:CDS | 35.0% | |
| GGTAGAACATCAATATCTAC+GGG | + | chr4_1:45889474-45889493 | Msa0550430:CDS | 35.0% | |
| ATAAAATGTCCAGAACCTGT+TGG | - | chr4_1:45889513-45889532 | None:intergenic | 35.0% | |
| GTTGGATGTTCTCTTCAATT+TGG | + | chr4_1:45889883-45889902 | Msa0550430:CDS | 35.0% | |
| GATGTTCTCTTCAATTTGGA+GGG | + | chr4_1:45889887-45889906 | Msa0550430:CDS | 35.0% | |
| TAGCATTGCCTTTCTCAGTT+TGG | - | chr4_1:45885452-45885471 | None:intergenic | 40.0% | |
| !!! | CGTTGAAGTTTGTGTCGTTT+TGG | + | chr4_1:45885518-45885537 | Msa0550430:CDS | 40.0% |
| CTTGAGTTTCTTACTGCAAC+CGG | - | chr4_1:45885573-45885592 | None:intergenic | 40.0% | |
| ! | TGAAAAAGGTGATAGCGTAG+AGG | + | chr4_1:45885797-45885816 | Msa0550430:CDS | 40.0% |
| GGGTGAAGAAGAGTTATAGA+AGG | + | chr4_1:45885838-45885857 | Msa0550430:CDS | 40.0% | |
| AACAATATCGTGTGTTGCGA+AGG | + | chr4_1:45885883-45885902 | Msa0550430:CDS | 40.0% | |
| ! | GCTTTTATTGCCAAGAACAG+AGG | + | chr4_1:45886032-45886051 | Msa0550430:CDS | 40.0% |
| ATCGATGAGTGTAAGGCTTA+AGG | + | chr4_1:45886297-45886316 | Msa0550430:intron | 40.0% | |
| TCGATGAGTGTAAGGCTTAA+GGG | + | chr4_1:45886298-45886317 | Msa0550430:intron | 40.0% | |
| TATACCCCAACTTATGTCTC+AGG | - | chr4_1:45886345-45886364 | None:intergenic | 40.0% | |
| ! | CATAAGTTGGGGTATATACG+AGG | + | chr4_1:45886349-45886368 | Msa0550430:intron | 40.0% |
| GGTATATACGAGGAGGATTA+AGG | + | chr4_1:45886359-45886378 | Msa0550430:intron | 40.0% | |
| !! | CATTGTCTTGATTTGCTCTC+AGG | + | chr4_1:45886453-45886472 | Msa0550430:intron | 40.0% |
| CATACAAGCCCTTCAACTAA+TGG | - | chr4_1:45886604-45886623 | None:intergenic | 40.0% | |
| !! | TGTGGGACAAAAGTTTTTGG+AGG | - | chr4_1:45887111-45887130 | None:intergenic | 40.0% |
| ! | GTGTGTGGGACAAAAGTTTT+TGG | - | chr4_1:45887114-45887133 | None:intergenic | 40.0% |
| CTCATGGTGAATTATGTGTG+TGG | - | chr4_1:45887129-45887148 | None:intergenic | 40.0% | |
| CATGAGCATATTTAAGCCTC+CGG | + | chr4_1:45887143-45887162 | Msa0550430:intron | 40.0% | |
| ! | ATTTAGAGCGAGATGACAAC+CGG | - | chr4_1:45887165-45887184 | None:intergenic | 40.0% |
| ACTATGATGTGGGTTCGAAA+TGG | + | chr4_1:45888094-45888113 | Msa0550430:intron | 40.0% | |
| TTGTTTGCAGTATGGATGGT+AGG | + | chr4_1:45888296-45888315 | Msa0550430:intron | 40.0% | |
| TGTTTGCAGTATGGATGGTA+GGG | + | chr4_1:45888297-45888316 | Msa0550430:intron | 40.0% | |
| ! | TTTGATTTCGCGTCTTGTCA+TGG | + | chr4_1:45888710-45888729 | Msa0550430:intron | 40.0% |
| AACGTTGACACCCAAATCAT+TGG | - | chr4_1:45888787-45888806 | None:intergenic | 40.0% | |
| ! | ATCCGGAAGCATGTGAATTT+CGG | + | chr4_1:45888811-45888830 | Msa0550430:CDS | 40.0% |
| ! | TTGCTAGCTTGAACAATACC+TGG | - | chr4_1:45889168-45889187 | None:intergenic | 40.0% |
| ! | AATCTTTTGTTCGAGGATCC+TGG | - | chr4_1:45889365-45889384 | None:intergenic | 40.0% |
| AGGATCCTCGAACAAAAGAT+TGG | + | chr4_1:45889364-45889383 | Msa0550430:intron | 40.0% | |
| GGATCCTCGAACAAAAGATT+GGG | + | chr4_1:45889365-45889384 | Msa0550430:intron | 40.0% | |
| TACCTTTCTGCTAAGTAGGA+TGG | + | chr4_1:45889844-45889863 | Msa0550430:intron | 40.0% | |
| GGATGTTCTCTTCAATTTGG+AGG | + | chr4_1:45889886-45889905 | Msa0550430:CDS | 40.0% | |
| ATCATTGCGTTGTTCGCTCA+AGG | + | chr4_1:45885660-45885679 | Msa0550430:CDS | 45.0% | |
| AGGTGTGAGAGTGAGAACAA+TGG | + | chr4_1:45885903-45885922 | Msa0550430:CDS | 45.0% | |
| GTGAGAGTGAGAACAATGGA+AGG | + | chr4_1:45885907-45885926 | Msa0550430:CDS | 45.0% | |
| CTGAGGAGGAAATGATTGTG+AGG | + | chr4_1:45885955-45885974 | Msa0550430:CDS | 45.0% | |
| ! | TGTGAGGATTTTGTATCCCG+AGG | + | chr4_1:45885971-45885990 | Msa0550430:CDS | 45.0% |
| TCGTTGCTCATCTTATCCTC+GGG | - | chr4_1:45885990-45886009 | None:intergenic | 45.0% | |
| CTCGTTGCTCATCTTATCCT+CGG | - | chr4_1:45885991-45886010 | None:intergenic | 45.0% | |
| GGAGTTTCGTCATACTGTAG+AGG | + | chr4_1:45886010-45886029 | Msa0550430:CDS | 45.0% | |
| CCAAGAACAGAGGATTCGAA+GGG | + | chr4_1:45886042-45886061 | Msa0550430:CDS | 45.0% | |
| TAGAAACCTGACCTAGATCG+AGG | + | chr4_1:45886183-45886202 | Msa0550430:intron | 45.0% | |
| TGCAAACACTCTAACGCACA+AGG | + | chr4_1:45886266-45886285 | Msa0550430:intron | 45.0% | |
| GGGTCTACAAACTGTATAGC+TGG | + | chr4_1:45886318-45886337 | Msa0550430:intron | 45.0% | |
| CTGGACCTGAGACATAAGTT+GGG | + | chr4_1:45886337-45886356 | Msa0550430:intron | 45.0% | |
| TGGACCTGAGACATAAGTTG+GGG | + | chr4_1:45886338-45886357 | Msa0550430:intron | 45.0% | |
| AAGTTGGGGTATATACGAGG+AGG | + | chr4_1:45886352-45886371 | Msa0550430:intron | 45.0% | |
| TCCTAGATCGACAACTGTCT+TGG | + | chr4_1:45886387-45886406 | Msa0550430:intron | 45.0% | |
| TCCAAGACAGTTGTCGATCT+AGG | - | chr4_1:45886391-45886410 | None:intergenic | 45.0% | |
| !! | CTTGATTTGCTCTCAGGACT+TGG | + | chr4_1:45886459-45886478 | Msa0550430:intron | 45.0% |
| ! | ATTTGCTCTCAGGACTTGGT+TGG | + | chr4_1:45886463-45886482 | Msa0550430:intron | 45.0% |
| ! | TTTGCTCTCAGGACTTGGTT+GGG | + | chr4_1:45886464-45886483 | Msa0550430:intron | 45.0% |
| GCTATAGATACGTCCTAGAG+AGG | - | chr4_1:45886494-45886513 | None:intergenic | 45.0% | |
| !! | ATGGATCACTCTAAGGTCAC+TGG | - | chr4_1:45886532-45886551 | None:intergenic | 45.0% |
| !! | GCCCTTCAACTAATGGATTG+TGG | - | chr4_1:45886597-45886616 | None:intergenic | 45.0% |
| CGGAGGCTTAAATATGCTCA+TGG | - | chr4_1:45887145-45887164 | None:intergenic | 45.0% | |
| GTCTCGGATGAGGTTATCTT+TGG | - | chr4_1:45887871-45887890 | None:intergenic | 45.0% | |
| TACACACACACACGCTCTAT+AGG | - | chr4_1:45887994-45888013 | None:intergenic | 45.0% | |
| AACCGAGCACAACTATGATG+TGG | + | chr4_1:45888083-45888102 | Msa0550430:intron | 45.0% | |
| ACCGAGCACAACTATGATGT+GGG | + | chr4_1:45888084-45888103 | Msa0550430:intron | 45.0% | |
| ACCCACATCATAGTTGTGCT+CGG | - | chr4_1:45888088-45888107 | None:intergenic | 45.0% | |
| TCTTTCTCCTTCGTTCATCG+AGG | + | chr4_1:45888521-45888540 | Msa0550430:intron | 45.0% | |
| TGTGATTCGTCGTCTAAGTG+CGG | + | chr4_1:45888658-45888677 | Msa0550430:intron | 45.0% | |
| !! | GTGTTGTTTGTCGTCTTGTG+CGG | + | chr4_1:45888685-45888704 | Msa0550430:intron | 45.0% |
| CACCGAAATTCACATGCTTC+CGG | - | chr4_1:45888816-45888835 | None:intergenic | 45.0% | |
| ATATGACGTTGAAAACGGCC+AGG | + | chr4_1:45889101-45889120 | Msa0550430:intron | 45.0% | |
| GGTGGAGACATGATCGAAAT+CGG | + | chr4_1:45889231-45889250 | Msa0550430:CDS | 45.0% | |
| ! | AGCACCCAATCTTTTGTTCG+AGG | - | chr4_1:45889372-45889391 | None:intergenic | 45.0% |
| TTGACGTCCACGAATCAAGT+AGG | + | chr4_1:45889444-45889463 | Msa0550430:CDS | 45.0% | |
| AAATGTCCAGAACCTGTTGG+TGG | - | chr4_1:45889510-45889529 | None:intergenic | 45.0% | |
| CTCCATCCTACTTAGCAGAA+AGG | - | chr4_1:45889849-45889868 | None:intergenic | 45.0% | |
| GCTAAGTAGGATGGAGATGA+AGG | + | chr4_1:45889853-45889872 | Msa0550430:intron | 45.0% | |
| AGTAGGATGGAGATGAAGGA+AGG | + | chr4_1:45889857-45889876 | Msa0550430:intron | 45.0% | |
| GTAGGATGGAGATGAAGGAA+GGG | + | chr4_1:45889858-45889877 | Msa0550430:intron | 45.0% | |
| TAGGATGGAGATGAAGGAAG+GGG | + | chr4_1:45889859-45889878 | Msa0550430:intron | 45.0% | |
| TCTCTTCAATTTGGAGGGCT+AGG | + | chr4_1:45889892-45889911 | Msa0550430:CDS | 45.0% | |
| !! | TAAAAAAAAAACAAAAAATT+AGG | + | chr4_1:45887060-45887079 | Msa0550430:intron | 5.0% |
| !!! | ACTTTTATTTTATTTTATTA+TGG | + | chr4_1:45887539-45887558 | Msa0550430:intron | 5.0% |
| !! | ATATATATATAATCTTATTA+TGG | + | chr4_1:45888013-45888032 | Msa0550430:intron | 5.0% |
| TGAACCTGCTCATGTTGCTG+AGG | + | chr4_1:45885938-45885957 | Msa0550430:CDS | 50.0% | |
| CGAGGATAAGATGAGCAACG+AGG | + | chr4_1:45885989-45886008 | Msa0550430:CDS | 50.0% | |
| GCCAAGAACAGAGGATTCGA+AGG | + | chr4_1:45886041-45886060 | Msa0550430:CDS | 50.0% | |
| CCCTTCGAATCCTCTGTTCT+TGG | - | chr4_1:45886045-45886064 | None:intergenic | 50.0% | |
| GTTTCTCAGGTCCTCGATCT+AGG | - | chr4_1:45886197-45886216 | None:intergenic | 50.0% | |
| GCTGGACCTGAGACATAAGT+TGG | + | chr4_1:45886336-45886355 | Msa0550430:intron | 50.0% | |
| TTCTCCTTCGTTCATCGAGG+AGG | + | chr4_1:45888524-45888543 | Msa0550430:intron | 50.0% | |
| TCTCCTTCGTTCATCGAGGA+GGG | + | chr4_1:45888525-45888544 | Msa0550430:intron | 50.0% | |
| CGTCCACGAATCAAGTAGGA+TGG | + | chr4_1:45889448-45889467 | Msa0550430:CDS | 50.0% | |
| ! | ACGCCATCCTACTTGATTCG+TGG | - | chr4_1:45889454-45889473 | None:intergenic | 50.0% |
| ACGAATCAAGTAGGATGGCG+TGG | + | chr4_1:45889453-45889472 | Msa0550430:CDS | 50.0% | |
| !! | AGAACCTGTTGGTGGACTAG+GGG | - | chr4_1:45889502-45889521 | None:intergenic | 50.0% |
| !! | CAGAACCTGTTGGTGGACTA+GGG | - | chr4_1:45889503-45889522 | None:intergenic | 50.0% |
| AGGATGGAGATGAAGGAAGG+GGG | + | chr4_1:45889860-45889879 | Msa0550430:intron | 50.0% | |
| CTTCAATTTGGAGGGCTAGG+AGG | + | chr4_1:45889895-45889914 | Msa0550430:CDS | 50.0% | |
| GCGTTGTTCGCTCAAGGTTC+TGG | + | chr4_1:45885666-45885685 | Msa0550430:CDS | 55.0% | |
| ACCTGCTCATGTTGCTGAGG+AGG | + | chr4_1:45885941-45885960 | Msa0550430:CDS | 55.0% | |
| TCCTCCTCAGCAACATGAGC+AGG | - | chr4_1:45885945-45885964 | None:intergenic | 55.0% | |
| TCAGGTCCTCGATCTAGGTC+AGG | - | chr4_1:45886192-45886211 | None:intergenic | 55.0% | |
| TTGGTTGGGTGTGCCTCTCT+AGG | + | chr4_1:45886478-45886497 | Msa0550430:intron | 55.0% | |
| GCGCACGCACAGGATTATTG+TGG | + | chr4_1:45886846-45886865 | Msa0550430:intron | 55.0% | |
| TAGAGCGAGATGACAACCGG+AGG | - | chr4_1:45887162-45887181 | None:intergenic | 55.0% | |
| CTCCTTCGTTCATCGAGGAG+GGG | + | chr4_1:45888526-45888545 | Msa0550430:intron | 55.0% | |
| ! | CATCGAGGAGGGGTGGTTTT+AGG | + | chr4_1:45888536-45888555 | Msa0550430:intron | 55.0% |
| GGGTGTCAACGTTGCAGATC+CGG | + | chr4_1:45888794-45888813 | Msa0550430:intron | 55.0% | |
| !! | CCAGAACCTGTTGGTGGACT+AGG | - | chr4_1:45889504-45889523 | None:intergenic | 55.0% |
| CCTAGTCCACCAACAGGTTC+TGG | + | chr4_1:45889501-45889520 | Msa0550430:CDS | 55.0% | |
| GGATGGAGATGAAGGAAGGG+GGG | + | chr4_1:45889861-45889880 | Msa0550430:intron | 55.0% | |
| GGAGGGCTAGGAGGAAAATG+TGG | + | chr4_1:45889904-45889923 | Msa0550430:CDS | 55.0% | |
| CGTGCGCGTGCATGTGTCTA+TGG | - | chr4_1:45886833-45886852 | None:intergenic | 60.0% | |
| CACCCCTCCTCGATGAACGA+AGG | - | chr4_1:45888531-45888550 | None:intergenic | 60.0% | |
| CTTCGTTCATCGAGGAGGGG+TGG | + | chr4_1:45888529-45888548 | Msa0550430:intron | 60.0% | |
| GGTTCCCCTAGTCCACCAAC+AGG | + | chr4_1:45889495-45889514 | Msa0550430:CDS | 60.0% | |
| GGAGATGAAGGAAGGGGGGT+TGG | + | chr4_1:45889865-45889884 | Msa0550430:CDS | 60.0% | |
| ACACATGCACGCGCACGCAC+AGG | + | chr4_1:45886836-45886855 | Msa0550430:intron | 65.0% | |
| CAGACACGCACGCACGCGTG+CGG | + | chr4_1:45886696-45886715 | Msa0550430:intron | 70.0% | |
| CGCACGCGTGCGTGCGTGTC+TGG | - | chr4_1:45886698-45886717 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 45885426 | 45889963 | 45885426 | ID=Msa0550430;Name=Msa0550430 |
| chr4_1 | mRNA | 45885426 | 45889963 | 45885426 | ID=Msa0550430-mRNA-1;Parent=Msa0550430;Name=Msa0550430-mRNA-1;_AED=0.39;_eAED=0.39;_QI=0|0|0|0.66|1|1|6|0|426 |
| chr4_1 | exon | 45885426 | 45886063 | 45885426 | ID=Msa0550430-mRNA-1:exon:12151;Parent=Msa0550430-mRNA-1 |
| chr4_1 | exon | 45887860 | 45887938 | 45887860 | ID=Msa0550430-mRNA-1:exon:12152;Parent=Msa0550430-mRNA-1 |
| chr4_1 | exon | 45888811 | 45888951 | 45888811 | ID=Msa0550430-mRNA-1:exon:12153;Parent=Msa0550430-mRNA-1 |
| chr4_1 | exon | 45889123 | 45889269 | 45889123 | ID=Msa0550430-mRNA-1:exon:12154;Parent=Msa0550430-mRNA-1 |
| chr4_1 | exon | 45889366 | 45889539 | 45889366 | ID=Msa0550430-mRNA-1:exon:12155;Parent=Msa0550430-mRNA-1 |
| chr4_1 | exon | 45889862 | 45889963 | 45889862 | ID=Msa0550430-mRNA-1:exon:12156;Parent=Msa0550430-mRNA-1 |
| chr4_1 | CDS | 45885426 | 45886063 | 45885426 | ID=Msa0550430-mRNA-1:cds;Parent=Msa0550430-mRNA-1 |
| chr4_1 | CDS | 45887860 | 45887938 | 45887860 | ID=Msa0550430-mRNA-1:cds;Parent=Msa0550430-mRNA-1 |
| chr4_1 | CDS | 45888811 | 45888951 | 45888811 | ID=Msa0550430-mRNA-1:cds;Parent=Msa0550430-mRNA-1 |
| chr4_1 | CDS | 45889123 | 45889269 | 45889123 | ID=Msa0550430-mRNA-1:cds;Parent=Msa0550430-mRNA-1 |
| chr4_1 | CDS | 45889366 | 45889539 | 45889366 | ID=Msa0550430-mRNA-1:cds;Parent=Msa0550430-mRNA-1 |
| chr4_1 | CDS | 45889862 | 45889963 | 45889862 | ID=Msa0550430-mRNA-1:cds;Parent=Msa0550430-mRNA-1 |
| Gene Sequence |
| Protein sequence |
