Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0560570 | XP_013457212.1 | 98.708 | 774 | 10 | 0 | 1 | 774 | 1 | 774 | 0.0 | 1591 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0560570 | sp|A5JTQ3|XYL2_MEDSV | 99.225 | 774 | 6 | 0 | 1 | 774 | 1 | 774 | 0.0 | 1590 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0560570 | A0A072UQA9 | 98.708 | 774 | 10 | 0 | 1 | 774 | 1 | 774 | 0.0 | 1591 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0006840 | Msa0560570 | 0.816842 | 4.488785e-52 | -8.615850e-47 |
Msa0030070 | Msa0560570 | 0.814843 | 1.252902e-51 | -8.615850e-47 |
Msa0032980 | Msa0560570 | 0.842072 | 3.232419e-58 | -8.615850e-47 |
Msa0040640 | Msa0560570 | 0.814672 | 1.367673e-51 | -8.615850e-47 |
Msa0049450 | Msa0560570 | 0.842842 | 2.020228e-58 | -8.615850e-47 |
Msa0050530 | Msa0560570 | 0.803462 | 3.445915e-49 | -8.615850e-47 |
Msa0079410 | Msa0560570 | 0.805122 | 1.555017e-49 | -8.615850e-47 |
Msa0091350 | Msa0560570 | 0.863725 | 2.027682e-64 | -8.615850e-47 |
Msa0094180 | Msa0560570 | 0.815670 | 8.207593e-52 | -8.615850e-47 |
Msa0100600 | Msa0560570 | 0.806669 | 7.351619e-50 | -8.615850e-47 |
Msa0100890 | Msa0560570 | 0.804358 | 2.245161e-49 | -8.615850e-47 |
Msa0106630 | Msa0560570 | 0.807383 | 5.193288e-50 | -8.615850e-47 |
Msa0125590 | Msa0560570 | 0.824588 | 7.440019e-54 | -8.615850e-47 |
Msa0127340 | Msa0560570 | 0.862022 | 6.802223e-64 | -8.615850e-47 |
Msa0153210 | Msa0560570 | 0.805340 | 1.399397e-49 | -8.615850e-47 |
Msa0165830 | Msa0560570 | 0.825703 | 4.056058e-54 | -8.615850e-47 |
Msa0165840 | Msa0560570 | 0.806095 | 9.713760e-50 | -8.615850e-47 |
Msa0168380 | Msa0560570 | 0.811375 | 7.223280e-51 | -8.615850e-47 |
Msa0170070 | Msa0560570 | 0.820295 | 7.395657e-53 | -8.615850e-47 |
Msa0184700 | Msa0560570 | 0.822710 | 2.047257e-53 | -8.615850e-47 |
Msa0186560 | Msa0560570 | 0.821593 | 3.717811e-53 | -8.615850e-47 |
Msa0197050 | Msa0560570 | 0.830658 | 2.594238e-55 | -8.615850e-47 |
Msa0204970 | Msa0560570 | 0.846376 | 2.258216e-59 | -8.615850e-47 |
Msa0225800 | Msa0560570 | 0.808077 | 3.696495e-50 | -8.615850e-47 |
Msa0373170 | Msa0560570 | 0.829437 | 5.149127e-55 | -8.615850e-47 |
Msa0385730 | Msa0560570 | 0.818283 | 2.125123e-52 | -8.615850e-47 |
Msa0405080 | Msa0560570 | 0.811906 | 5.538282e-51 | -8.615850e-47 |
Msa0420430 | Msa0560570 | 0.847757 | 9.447758e-60 | -8.615850e-47 |
Msa0421750 | Msa0560570 | 0.833120 | 6.399220e-56 | -8.615850e-47 |
Msa0432690 | Msa0560570 | 0.815924 | 7.204732e-52 | -8.615850e-47 |
Msa0433760 | Msa0560570 | 0.810536 | 1.097573e-50 | -8.615850e-47 |
Msa0461550 | Msa0560570 | 0.812478 | 4.155371e-51 | -8.615850e-47 |
Msa0466520 | Msa0560570 | 0.835141 | 1.994473e-56 | -8.615850e-47 |
Msa0467690 | Msa0560570 | 0.828827 | 7.241926e-55 | -8.615850e-47 |
Msa0477630 | Msa0560570 | 0.808462 | 3.060307e-50 | -8.615850e-47 |
Msa0241040 | Msa0560570 | 0.802087 | 6.626914e-49 | -8.615850e-47 |
Msa0249870 | Msa0560570 | 0.849232 | 3.691172e-60 | -8.615850e-47 |
Msa0260570 | Msa0560570 | 0.812006 | 5.266110e-51 | -8.615850e-47 |
Msa0260630 | Msa0560570 | 0.830535 | 2.781157e-55 | -8.615850e-47 |
Msa0276730 | Msa0560570 | 0.838707 | 2.451347e-57 | -8.615850e-47 |
Msa0278840 | Msa0560570 | 0.816772 | 4.655612e-52 | -8.615850e-47 |
Msa0281540 | Msa0560570 | 0.849726 | 2.687162e-60 | -8.615850e-47 |
Msa0316630 | Msa0560570 | 0.841611 | 4.278120e-58 | -8.615850e-47 |
Msa0320580 | Msa0560570 | 0.837250 | 5.806882e-57 | -8.615850e-47 |
Msa0336430 | Msa0560570 | 0.814586 | 1.428547e-51 | -8.615850e-47 |
Msa0336520 | Msa0560570 | 0.809672 | 1.685169e-50 | -8.615850e-47 |
Msa0341680 | Msa0560570 | 0.834020 | 3.815328e-56 | -8.615850e-47 |
Msa0344110 | Msa0560570 | 0.837239 | 5.845082e-57 | -8.615850e-47 |
Msa0349550 | Msa0560570 | 0.829625 | 4.635389e-55 | -8.615850e-47 |
Msa0507810 | Msa0560570 | 0.815931 | 7.179241e-52 | -8.615850e-47 |
Msa0507820 | Msa0560570 | 0.808550 | 2.931197e-50 | -8.615850e-47 |
Msa0507920 | Msa0560570 | 0.819936 | 8.936847e-53 | -8.615850e-47 |
Msa0513080 | Msa0560570 | 0.823848 | 1.110480e-53 | -8.615850e-47 |
Msa0514020 | Msa0560570 | 0.828840 | 7.187002e-55 | -8.615850e-47 |
Msa0521320 | Msa0560570 | 0.814389 | 1.579913e-51 | -8.615850e-47 |
Msa0524320 | Msa0560570 | 0.854658 | 1.062666e-61 | -8.615850e-47 |
Msa0524430 | Msa0560570 | 0.858800 | 6.423972e-63 | -8.615850e-47 |
Msa0527850 | Msa0560570 | 0.825779 | 3.891305e-54 | -8.615850e-47 |
Msa0544410 | Msa0560570 | 0.818103 | 2.333888e-52 | -8.615850e-47 |
Msa0553210 | Msa0560570 | 0.827316 | 1.673218e-54 | -8.615850e-47 |
Msa0553750 | Msa0560570 | 0.825761 | 3.929241e-54 | -8.615850e-47 |
Msa0554300 | Msa0560570 | 0.825811 | 3.824034e-54 | -8.615850e-47 |
Msa0557850 | Msa0560570 | 0.835846 | 1.322776e-56 | -8.615850e-47 |
Msa0560570 | Msa0561560 | 0.838828 | 2.280938e-57 | -8.615850e-47 |
Msa0560570 | Msa0572830 | 0.830745 | 2.469932e-55 | -8.615850e-47 |
Msa0560570 | Msa0575710 | 0.840948 | 6.393272e-58 | -8.615850e-47 |
Msa0560570 | Msa0576330 | 0.826864 | 2.146496e-54 | -8.615850e-47 |
Msa0560570 | Msa0579360 | -0.802933 | 4.434390e-49 | -8.615850e-47 |
Msa0560570 | Msa0582460 | 0.813672 | 2.273799e-51 | -8.615850e-47 |
Msa0560570 | Msa0586200 | 0.810255 | 1.262207e-50 | -8.615850e-47 |
Msa0560570 | Msa0587180 | 0.809950 | 1.468369e-50 | -8.615850e-47 |
Msa0560570 | Msa0605520 | 0.807236 | 5.578207e-50 | -8.615850e-47 |
Msa0560570 | Msa0607330 | 0.815843 | 7.512295e-52 | -8.615850e-47 |
Msa0560570 | Msa0608350 | 0.826891 | 2.114436e-54 | -8.615850e-47 |
Msa0560570 | Msa0614550 | 0.938137 | 1.105691e-98 | -8.615850e-47 |
Msa0560570 | Msa0614980 | -0.807763 | 4.311367e-50 | -8.615850e-47 |
Msa0560570 | Msa0620500 | 0.822138 | 2.780403e-53 | -8.615850e-47 |
Msa0560570 | Msa0639190 | 0.969322 | 5.946817e-130 | -8.615850e-47 |
Msa0560570 | Msa0640800 | 0.808810 | 2.578957e-50 | -8.615850e-47 |
Msa0560570 | Msa0647440 | 0.842359 | 2.713039e-58 | -8.615850e-47 |
Msa0560570 | Msa0648760 | 0.826310 | 2.909607e-54 | -8.615850e-47 |
Msa0560570 | Msa0653160 | 0.823495 | 1.343210e-53 | -8.615850e-47 |
Msa0560570 | Msa0654740 | 0.834508 | 2.878310e-56 | -8.615850e-47 |
Msa0560570 | Msa0663290 | 0.820891 | 5.396309e-53 | -8.615850e-47 |
Msa0560570 | Msa0664070 | 0.818105 | 2.331146e-52 | -8.615850e-47 |
Msa0560570 | Msa0673940 | 0.803125 | 4.047508e-49 | -8.615850e-47 |
Msa0560570 | Msa0684750 | 0.811777 | 5.908026e-51 | -8.615850e-47 |
Msa0560570 | Msa0687090 | 0.807401 | 5.146382e-50 | -8.615850e-47 |
Msa0560570 | Msa0688620 | 0.849331 | 3.463154e-60 | -8.615850e-47 |
Msa0560570 | Msa0690320 | 0.854367 | 1.290456e-61 | -8.615850e-47 |
Msa0560570 | Msa0691270 | 0.831052 | 2.077082e-55 | -8.615850e-47 |
Msa0560570 | Msa0695560 | 0.824810 | 6.596802e-54 | -8.615850e-47 |
Msa0560570 | Msa0697830 | 0.854530 | 1.157384e-61 | -8.615850e-47 |
Msa0560570 | Msa0707260 | 0.807057 | 6.086390e-50 | -8.615850e-47 |
Msa0560570 | Msa0717900 | 0.814491 | 1.499750e-51 | -8.615850e-47 |
Msa0560570 | Msa0720280 | 0.843719 | 1.178810e-58 | -8.615850e-47 |
Msa0560570 | Msa0737130 | 0.808614 | 2.840625e-50 | -8.615850e-47 |
Msa0560570 | Msa0749190 | 0.841497 | 4.584262e-58 | -8.615850e-47 |
Msa0560570 | Msa0750520 | 0.848265 | 6.841035e-60 | -8.615850e-47 |
Msa0560570 | Msa0751250 | 0.802624 | 5.135038e-49 | -8.615850e-47 |
Msa0560570 | Msa0751720 | 0.814656 | 1.378919e-51 | -8.615850e-47 |
Msa0560570 | Msa0756330 | 0.826532 | 2.576654e-54 | -8.615850e-47 |
Msa0560570 | Msa0764770 | 0.841571 | 4.383309e-58 | -8.615850e-47 |
Msa0560570 | Msa0771910 | 0.812565 | 3.977025e-51 | -8.615850e-47 |
Msa0560570 | Msa0803140 | 0.841800 | 3.813589e-58 | -8.615850e-47 |
Msa0560570 | Msa0816080 | 0.823296 | 1.494924e-53 | -8.615850e-47 |
Msa0560570 | Msa0831820 | 0.817752 | 2.801524e-52 | -8.615850e-47 |
Msa0560570 | Msa0837680 | 0.812351 | 4.428432e-51 | -8.615850e-47 |
Msa0560570 | Msa0841500 | 0.836342 | 9.898825e-57 | -8.615850e-47 |
Msa0560570 | Msa0861440 | 0.819876 | 9.225595e-53 | -8.615850e-47 |
Msa0560570 | Msa0897790 | 0.814568 | 1.441956e-51 | -8.615850e-47 |
Msa0560570 | Msa0900090 | 0.822554 | 2.226328e-53 | -8.615850e-47 |
Msa0560570 | Msa0929900 | 0.838637 | 2.555231e-57 | -8.615850e-47 |
Msa0560570 | Msa0965470 | 0.830875 | 2.295137e-55 | -8.615850e-47 |
Msa0560570 | Msa0999950 | 0.802985 | 4.325678e-49 | -8.615850e-47 |
Msa0560570 | Msa1008260 | 0.803997 | 2.668159e-49 | -8.615850e-47 |
Msa0560570 | Msa1008850 | 0.804221 | 2.397225e-49 | -8.615850e-47 |
Msa0560570 | Msa1021560 | 0.809663 | 1.693271e-50 | -8.615850e-47 |
Msa0560570 | Msa1060900 | 0.804570 | 2.027517e-49 | -8.615850e-47 |
Msa0560570 | Msa1071410 | 0.845960 | 2.930521e-59 | -8.615850e-47 |
Msa0560570 | Msa1078860 | 0.806019 | 1.007881e-49 | -8.615850e-47 |
Msa0560570 | Msa1078990 | 0.809327 | 1.998940e-50 | -8.615850e-47 |
Msa0560570 | Msa1085680 | 0.819346 | 1.219029e-52 | -8.615850e-47 |
Msa0560570 | Msa1105540 | 0.819651 | 1.038343e-52 | -8.615850e-47 |
Msa0560570 | Msa1105580 | 0.802386 | 5.749595e-49 | -8.615850e-47 |
Msa0560570 | Msa1106220 | 0.853974 | 1.675189e-61 | -8.615850e-47 |
Msa0560570 | Msa1144990 | 0.852395 | 4.747777e-61 | -8.615850e-47 |
Msa0560570 | Msa1148930 | 0.802472 | 5.520273e-49 | -8.615850e-47 |
Msa0560570 | Msa1169170 | 0.821074 | 4.898853e-53 | -8.615850e-47 |
Msa0560570 | Msa1188340 | 0.808831 | 2.553259e-50 | -8.615850e-47 |
Msa0560570 | Msa1191000 | 0.819060 | 1.415788e-52 | -8.615850e-47 |
Msa0560570 | Msa1206040 | 0.823044 | 1.712147e-53 | -8.615850e-47 |
Msa0560570 | Msa1212700 | 0.800536 | 1.376397e-48 | -8.615850e-47 |
Msa0560570 | Msa1212920 | 0.820722 | 5.904154e-53 | -8.615850e-47 |
Msa0560570 | Msa1215980 | 0.824325 | 8.579712e-54 | -8.615850e-47 |
Msa0560570 | Msa1240940 | 0.821360 | 4.209206e-53 | -8.615850e-47 |
Msa0560570 | Msa1254420 | 0.823086 | 1.673907e-53 | -8.615850e-47 |
Msa0560570 | Msa1263740 | 0.823264 | 1.521022e-53 | -8.615850e-47 |
Msa0560570 | Msa1282300 | 0.816771 | 4.658064e-52 | -8.615850e-47 |
Msa0560570 | Msa1294460 | 0.816856 | 4.458049e-52 | -8.615850e-47 |
Msa0560570 | Msa1294790 | 0.852803 | 3.632319e-61 | -8.615850e-47 |
Msa0560570 | Msa1296330 | 0.803325 | 3.678209e-49 | -8.615850e-47 |
Msa0560570 | Msa1296860 | 0.815667 | 8.219971e-52 | -8.615850e-47 |
Msa0560570 | Msa1297070 | 0.833451 | 5.292070e-56 | -8.615850e-47 |
Msa0560570 | Msa1299980 | 0.814964 | 1.178038e-51 | -8.615850e-47 |
Msa0560570 | Msa1301820 | 0.800850 | 1.187493e-48 | -8.615850e-47 |
Msa0560570 | Msa1305920 | 0.819327 | 1.230750e-52 | -8.615850e-47 |
Msa0560570 | Msa1321530 | 0.813602 | 2.355572e-51 | -8.615850e-47 |
Msa0560570 | Msa1328870 | 0.813135 | 2.983567e-51 | -8.615850e-47 |
Msa0560570 | Msa1331650 | 0.842195 | 2.998151e-58 | -8.615850e-47 |
Msa0560570 | Msa1342810 | 0.829492 | 4.994413e-55 | -8.615850e-47 |
Msa0560570 | Msa1367520 | 0.836438 | 9.357014e-57 | -8.615850e-47 |
Msa0560570 | Msa1371800 | 0.802637 | 5.104853e-49 | -8.615850e-47 |
Msa0560570 | Msa1372030 | 0.830774 | 2.430253e-55 | -8.615850e-47 |
Msa0560570 | Msa1376310 | 0.802599 | 5.196603e-49 | -8.615850e-47 |
Msa0560570 | Msa1381800 | 0.847083 | 1.447514e-59 | -8.615850e-47 |
Msa0560570 | Msa1389820 | 0.844265 | 8.414577e-59 | -8.615850e-47 |
Msa0560570 | Msa1393560 | 0.805199 | 1.498265e-49 | -8.615850e-47 |
Msa0560570 | Msa1406720 | 0.823076 | 1.683137e-53 | -8.615850e-47 |
Msa0560570 | Msa1424370 | 0.812458 | 4.196814e-51 | -8.615850e-47 |
Msa0560570 | Msa1424590 | 0.864410 | 1.240763e-64 | -8.615850e-47 |
Msa0560570 | Msa1426320 | 0.803520 | 3.351566e-49 | -8.615850e-47 |
Msa0560570 | Msa1457840 | 0.801743 | 7.796286e-49 | -8.615850e-47 |
Msa0560570 | Msa1466890 | 0.803096 | 4.102364e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0560570 | MtrunA17_Chr4g0050591 | 98.708 | 774 | 10 | 0 | 1 | 774 | 1 | 774 | 0.0 | 1591 |
Msa0560570 | MtrunA17_Chr2g0278761 | 85.032 | 775 | 115 | 1 | 1 | 774 | 1 | 775 | 0.0 | 1367 |
Msa0560570 | MtrunA17_Chr1g0194841 | 57.332 | 757 | 311 | 5 | 19 | 772 | 8 | 755 | 0.0 | 895 |
Msa0560570 | MtrunA17_Chr7g0269871 | 57.235 | 774 | 306 | 9 | 8 | 772 | 4 | 761 | 0.0 | 894 |
Msa0560570 | MtrunA17_Chr2g0294751 | 57.778 | 765 | 300 | 9 | 14 | 772 | 7 | 754 | 0.0 | 878 |
Msa0560570 | MtrunA17_Chr1g0207281 | 55.627 | 773 | 303 | 12 | 13 | 764 | 22 | 775 | 0.0 | 843 |
Msa0560570 | MtrunA17_Chr5g0411571 | 47.943 | 778 | 373 | 11 | 20 | 774 | 14 | 782 | 0.0 | 753 |
Msa0560570 | MtrunA17_Chr3g0115601 | 47.119 | 781 | 380 | 15 | 14 | 774 | 9 | 776 | 0.0 | 717 |
Msa0560570 | MtrunA17_Chr5g0425471 | 46.164 | 782 | 391 | 13 | 14 | 774 | 10 | 782 | 0.0 | 714 |
Msa0560570 | MtrunA17_Chr5g0425431 | 46.183 | 786 | 394 | 14 | 10 | 774 | 3 | 780 | 0.0 | 714 |
Msa0560570 | MtrunA17_Chr5g0425451 | 46.164 | 782 | 391 | 13 | 14 | 774 | 10 | 782 | 0.0 | 703 |
Msa0560570 | MtrunA17_Chr5g0425531 | 45.812 | 788 | 398 | 14 | 9 | 774 | 5 | 785 | 0.0 | 696 |
Msa0560570 | MtrunA17_Chr6g0461231 | 27.328 | 655 | 341 | 29 | 38 | 612 | 13 | 612 | 3.06e-40 | 157 |
Msa0560570 | MtrunA17_Chr6g0461191 | 27.057 | 632 | 341 | 26 | 54 | 612 | 28 | 612 | 3.49e-40 | 157 |
Msa0560570 | MtrunA17_Chr3g0118971 | 27.625 | 619 | 354 | 24 | 54 | 612 | 28 | 612 | 5.13e-39 | 154 |
Msa0560570 | MtrunA17_Chr6g0461211 | 25.943 | 636 | 343 | 24 | 54 | 612 | 28 | 612 | 1.99e-37 | 149 |
Msa0560570 | MtrunA17_Chr6g0461221 | 25.547 | 685 | 374 | 29 | 38 | 641 | 14 | 643 | 4.96e-37 | 148 |
Msa0560570 | MtrunA17_Chr3g0104081 | 25.041 | 603 | 354 | 21 | 54 | 593 | 22 | 589 | 2.63e-35 | 142 |
Msa0560570 | MtrunA17_Chr2g0292341 | 27.068 | 665 | 364 | 26 | 54 | 648 | 30 | 643 | 1.43e-34 | 140 |
Msa0560570 | MtrunA17_Chr7g0253561 | 25.421 | 653 | 359 | 25 | 54 | 637 | 4 | 597 | 6.53e-34 | 138 |
Msa0560570 | MtrunA17_Chr5g0429581 | 26.677 | 626 | 354 | 26 | 54 | 612 | 5 | 592 | 1.39e-33 | 137 |
Msa0560570 | MtrunA17_Chr5g0429541 | 25.723 | 622 | 351 | 24 | 54 | 612 | 5 | 578 | 8.61e-32 | 131 |
Msa0560570 | MtrunA17_Chr7g0253551 | 27.009 | 448 | 224 | 18 | 54 | 437 | 29 | 437 | 1.10e-27 | 117 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0560570 | AT5G64570.1 | 71.355 | 782 | 205 | 4 | 5 | 774 | 10 | 784 | 0.0 | 1189 |
Msa0560570 | AT5G09730.1 | 68.229 | 768 | 232 | 3 | 12 | 774 | 13 | 773 | 0.0 | 1125 |
Msa0560570 | AT5G64570.2 | 72.887 | 627 | 163 | 2 | 154 | 774 | 1 | 626 | 0.0 | 994 |
Msa0560570 | AT5G64570.3 | 73.729 | 590 | 142 | 3 | 5 | 588 | 10 | 592 | 0.0 | 906 |
Msa0560570 | AT3G19620.1 | 56.407 | 757 | 316 | 7 | 18 | 764 | 6 | 758 | 0.0 | 883 |
Msa0560570 | AT1G02640.1 | 54.941 | 759 | 335 | 4 | 15 | 772 | 6 | 758 | 0.0 | 868 |
Msa0560570 | AT5G49360.1 | 57.723 | 764 | 305 | 10 | 19 | 772 | 15 | 770 | 0.0 | 867 |
Msa0560570 | AT5G10560.1 | 47.656 | 768 | 361 | 9 | 39 | 772 | 30 | 790 | 0.0 | 743 |
Msa0560570 | AT1G78060.1 | 47.340 | 752 | 370 | 11 | 40 | 774 | 25 | 767 | 0.0 | 723 |
Msa0560570 | AT5G09700.1 | 66.598 | 482 | 155 | 2 | 299 | 774 | 45 | 526 | 0.0 | 688 |
Msa0560570 | AT3G47050.1 | 26.942 | 605 | 363 | 23 | 51 | 603 | 7 | 584 | 3.13e-39 | 154 |
Msa0560570 | AT3G47000.1 | 27.169 | 611 | 368 | 24 | 54 | 612 | 10 | 595 | 2.23e-38 | 152 |
Msa0560570 | AT3G47040.4 | 24.733 | 655 | 374 | 24 | 54 | 643 | 10 | 610 | 1.18e-36 | 147 |
Msa0560570 | AT3G47010.1 | 25.926 | 621 | 371 | 23 | 50 | 612 | 7 | 596 | 2.49e-36 | 145 |
Msa0560570 | AT3G47010.2 | 25.645 | 620 | 373 | 22 | 50 | 612 | 7 | 595 | 9.99e-36 | 144 |
Msa0560570 | AT5G04885.3 | 26.837 | 626 | 357 | 24 | 54 | 616 | 30 | 617 | 2.23e-35 | 143 |
Msa0560570 | AT5G04885.1 | 26.837 | 626 | 357 | 24 | 54 | 616 | 30 | 617 | 2.23e-35 | 143 |
Msa0560570 | AT5G04885.2 | 26.837 | 626 | 357 | 24 | 54 | 616 | 47 | 634 | 2.91e-35 | 143 |
Msa0560570 | AT3G47040.1 | 24.478 | 670 | 382 | 25 | 54 | 643 | 10 | 635 | 2.40e-34 | 140 |
Msa0560570 | AT3G62710.1 | 25.585 | 684 | 367 | 28 | 17 | 612 | 11 | 640 | 2.01e-33 | 137 |
Msa0560570 | AT5G20940.1 | 26.730 | 636 | 362 | 27 | 41 | 612 | 18 | 613 | 2.89e-32 | 133 |
Msa0560570 | AT3G47000.3 | 29.885 | 435 | 235 | 20 | 54 | 437 | 10 | 425 | 2.12e-31 | 128 |
Msa0560570 | AT5G20950.3 | 26.034 | 653 | 377 | 28 | 38 | 625 | 90 | 701 | 9.47e-31 | 129 |
Msa0560570 | AT5G20950.2 | 26.060 | 637 | 367 | 27 | 54 | 625 | 26 | 623 | 1.78e-30 | 128 |
Msa0560570 | AT5G20950.1 | 26.060 | 637 | 367 | 27 | 54 | 625 | 26 | 623 | 1.78e-30 | 128 |
Msa0560570 | AT3G47040.3 | 26.786 | 448 | 232 | 18 | 54 | 437 | 10 | 425 | 3.73e-30 | 125 |
Msa0560570 | AT3G47010.4 | 26.915 | 457 | 252 | 18 | 50 | 449 | 7 | 438 | 1.11e-27 | 117 |
Msa0560570 | AT3G47040.2 | 23.348 | 681 | 384 | 26 | 54 | 643 | 10 | 643 | 1.72e-25 | 112 |
Msa0560570 | AT3G47050.2 | 28.713 | 303 | 161 | 11 | 51 | 310 | 7 | 297 | 2.29e-23 | 103 |
Msa0560570 | AT3G47010.3 | 26.150 | 413 | 266 | 15 | 215 | 612 | 29 | 417 | 7.51e-23 | 102 |
Msa0560570 | AT3G47000.2 | 26.225 | 408 | 273 | 15 | 215 | 612 | 29 | 418 | 2.22e-21 | 98.2 |
Find 203 sgRNAs with CRISPR-Local
Find 290 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCAGACCACCATTCATATTT+TGG | 0.140699 | 4_1:-59850851 | None:intergenic |
CACCAAACATTAACATATTT+AGG | 0.157012 | 4_1:+59851160 | Msa0560570:CDS |
ATTAAATCATTGGCAGTTAT+TGG | 0.184597 | 4_1:+59852655 | Msa0560570:CDS |
CGTGGCAAATGGAAACTAAA+TGG | 0.204423 | 4_1:+59851617 | Msa0560570:CDS |
TCACTTCTAAAACTTATTTC+TGG | 0.205705 | 4_1:-59854391 | None:intergenic |
CTCAACTTTCGAGCATAAAT+TGG | 0.211723 | 4_1:+59853890 | Msa0560570:CDS |
GCTGACCCTGATCTTCTTAA+AGG | 0.226486 | 4_1:+59851587 | Msa0560570:CDS |
CTATTATATGTAGTTGCTTT+TGG | 0.238316 | 4_1:-59850388 | None:intergenic |
TGTTCCTACAATCAAGTAAA+TGG | 0.245995 | 4_1:+59851551 | Msa0560570:CDS |
GCTGAAGTGCAGACATCTTT+TGG | 0.254948 | 4_1:-59852544 | None:intergenic |
TGCTGAGGCTGCAATCCTTT+TGG | 0.277940 | 4_1:-59852949 | None:intergenic |
TCTTGACCTCTTCCCCATCT+TGG | 0.278328 | 4_1:-59851186 | None:intergenic |
TGCAGCTTCCTCAGGGGTCT+TGG | 0.289885 | 4_1:-59852161 | None:intergenic |
GCCATAGCTGATGTCATCTT+TGG | 0.300033 | 4_1:+59853212 | Msa0560570:CDS |
TGCCAATGATTTAATAGCTT+TGG | 0.304831 | 4_1:-59852647 | None:intergenic |
CATGCCTCCTCCAGACATTA+TGG | 0.305665 | 4_1:-59853111 | None:intergenic |
GACTTGGCTGCAGCTTCCTC+AGG | 0.311461 | 4_1:-59852169 | None:intergenic |
ATTCGCCAATGCTGGATTCT+TGG | 0.315695 | 4_1:-59850702 | None:intergenic |
GGGGAAACTGTCTTCTCATT+TGG | 0.319056 | 4_1:+59853852 | Msa0560570:CDS |
TCAATCACACAGCTCTTAAA+AGG | 0.325703 | 4_1:-59851506 | None:intergenic |
ATTGTAGACGGCATTGTTAA+TGG | 0.328849 | 4_1:-59852449 | None:intergenic |
ACCAAACATTAACATATTTA+GGG | 0.344637 | 4_1:+59851161 | Msa0560570:CDS |
TTAAATCATTGGCAGTTATT+GGG | 0.348888 | 4_1:+59852656 | Msa0560570:CDS |
AATCCAGCATTGGCGAATTA+CGG | 0.359386 | 4_1:+59850707 | Msa0560570:CDS |
TCAAATTCTCAAGGTCATAA+TGG | 0.369386 | 4_1:+59850553 | Msa0560570:exon |
ATCCAGCATTGGCGAATTAC+GGG | 0.371963 | 4_1:+59850708 | Msa0560570:CDS |
TTTAAGAGCTGTGTGATTGA+TGG | 0.379593 | 4_1:+59851509 | Msa0560570:CDS |
GAGAATAGGCATAGGAAAAC+TGG | 0.380578 | 4_1:-59850939 | None:intergenic |
AGTAGCCCGTGATGGGTGTT+AGG | 0.382481 | 4_1:-59850429 | None:intergenic |
GCTGTCAAGCAAGGGCTTAT+AGG | 0.388682 | 4_1:+59852418 | Msa0560570:CDS |
ATGCGTCTAGGTTTCTTTGA+TGG | 0.391137 | 4_1:+59852487 | Msa0560570:CDS |
ATTCTGTGGGTTGGCTATCC+TGG | 0.392669 | 4_1:+59853173 | Msa0560570:CDS |
GATCCTAGCAAGCAACCTTA+TGG | 0.393133 | 4_1:+59852511 | Msa0560570:CDS |
CCATAGCTGATGTCATCTTT+GGG | 0.402935 | 4_1:+59853213 | Msa0560570:CDS |
AGCAGCAACCTTAAGCTTGT+TGG | 0.404848 | 4_1:-59851292 | None:intergenic |
TGCCAAAGCTATTAAATCAT+TGG | 0.406948 | 4_1:+59852645 | Msa0560570:CDS |
TTTCCATAAGGTTGCTTGCT+AGG | 0.410934 | 4_1:-59852514 | None:intergenic |
TGGAGATTCCAACAAGCTTA+AGG | 0.418052 | 4_1:+59851284 | Msa0560570:CDS |
ACTAACTGTTGCTGCTGTCC+TGG | 0.428145 | 4_1:-59853047 | None:intergenic |
TGACAGCACCTTCTGTATAT+CGG | 0.431143 | 4_1:-59852402 | None:intergenic |
ATAACACCTTTAAGAAGATC+AGG | 0.432414 | 4_1:-59851593 | None:intergenic |
ACCTTCGTAGTTTCCAATCA+TGG | 0.434772 | 4_1:-59852701 | None:intergenic |
ATTGGTTAAAGCACCACAAT+TGG | 0.441371 | 4_1:+59853908 | Msa0560570:CDS |
ATACATTACCACAGCATTGA+AGG | 0.443167 | 4_1:-59851373 | None:intergenic |
TGCACCTCAGAAACACTTGT+TGG | 0.443221 | 4_1:+59854109 | Msa0560570:CDS |
TTGTGGGAACTAAGGCTGTT+AGG | 0.443745 | 4_1:-59852872 | None:intergenic |
AGGCGAAAACTGCAGATGTT+TGG | 0.443791 | 4_1:-59850670 | None:intergenic |
GGCCCAATGCTAATGCTACT+AGG | 0.444209 | 4_1:+59852677 | Msa0560570:CDS |
AACCCGTAATTCGCCAATGC+TGG | 0.444375 | 4_1:-59850710 | None:intergenic |
GACATTATGGCAAGAATCAC+AGG | 0.445330 | 4_1:-59853098 | None:intergenic |
GCATTGGTGCATTGAACATC+AGG | 0.448023 | 4_1:-59852912 | None:intergenic |
GTTGGCTATCCTGGAGAAGC+TGG | 0.450796 | 4_1:+59853182 | Msa0560570:CDS |
GGTTGGCTGGTTTAACATAT+TGG | 0.452673 | 4_1:+59851136 | Msa0560570:CDS |
CTCATGTTCATATTGGTCAT+TGG | 0.453094 | 4_1:-59853780 | None:intergenic |
GTTCCCACAAGCTTTGCTGC+TGG | 0.455205 | 4_1:+59852885 | Msa0560570:CDS |
ATGCACAACGTCGGGTTGGC+TGG | 0.455328 | 4_1:+59851123 | Msa0560570:CDS |
TCCCTAAATATGTTAATGTT+TGG | 0.457701 | 4_1:-59851162 | None:intergenic |
CAGCTTCACGAGCTAGCTCC+TGG | 0.458313 | 4_1:-59852570 | None:intergenic |
CAAGAGCAATGCACAACGTC+GGG | 0.459504 | 4_1:+59851115 | Msa0560570:CDS |
AGGATTAACATACTTCTTCC+AGG | 0.461097 | 4_1:+59853029 | Msa0560570:CDS |
AATTATATATGTCACATTAG+TGG | 0.461580 | 4_1:-59850482 | None:intergenic |
ACATATTTAGGGATCCAAGA+TGG | 0.461963 | 4_1:+59851172 | Msa0560570:CDS |
ATCCGGCCTCATGTTCATAT+TGG | 0.462557 | 4_1:-59853787 | None:intergenic |
AAAGAAGCTGCAATGAGAAT+AGG | 0.464509 | 4_1:-59850953 | None:intergenic |
TCCCTTTGTTCTTGATCCTG+AGG | 0.465656 | 4_1:-59854031 | None:intergenic |
CGGTGCAAATCTTGCAATAG+AGG | 0.465750 | 4_1:+59852992 | Msa0560570:CDS |
GGGTAGCCTGTAGCAGGATC+CGG | 0.467218 | 4_1:-59853804 | None:intergenic |
CTTGCTAGCAAATATGCAGC+AGG | 0.468402 | 4_1:+59851231 | Msa0560570:CDS |
TGTAAGTCGCTTGATGTTGT+TGG | 0.471371 | 4_1:+59853975 | Msa0560570:CDS |
GTGATTCTTGCCATAATGTC+TGG | 0.471490 | 4_1:+59853101 | Msa0560570:CDS |
CATATTTAGGGATCCAAGAT+GGG | 0.473111 | 4_1:+59851173 | Msa0560570:CDS |
CTTCATGGAGTCTCTAACAT+TGG | 0.474694 | 4_1:+59850878 | Msa0560570:CDS |
TGAGGTGCATTGTGCACTGC+AGG | 0.474909 | 4_1:-59854095 | None:intergenic |
GCTGTTGATGTAAGCAGACT+TGG | 0.476218 | 4_1:+59850824 | Msa0560570:CDS |
GAGAAACCTTACCTTTCCTA+TGG | 0.476556 | 4_1:-59850996 | None:intergenic |
TGGTGGTCTGAAGCACTTCA+TGG | 0.476761 | 4_1:+59850863 | Msa0560570:CDS |
AGCAAAGCTTGTGGGAACTA+AGG | 0.478113 | 4_1:-59852880 | None:intergenic |
ATGTAGTTTACCTGCTAGAA+TGG | 0.479155 | 4_1:-59852191 | None:intergenic |
ACCTCAGGATCAAGAACAAA+GGG | 0.481557 | 4_1:+59854030 | Msa0560570:CDS |
CATATTTGCTAGCAAGTAAA+GGG | 0.484061 | 4_1:-59851224 | None:intergenic |
TTTGGACCAAGGTTTCCATA+AGG | 0.489120 | 4_1:-59852526 | None:intergenic |
GCATATTTGCTAGCAAGTAA+AGG | 0.490578 | 4_1:-59851225 | None:intergenic |
TTGAGTGTGGTTGATGAACT+TGG | 0.490808 | 4_1:+59854203 | Msa0560570:CDS |
AAGGTGTTATCCGTGGCAAA+TGG | 0.492172 | 4_1:+59851606 | Msa0560570:CDS |
CTTTCCTATGGTTTGAAACA+AGG | 0.492728 | 4_1:-59850984 | None:intergenic |
GGCATCGTCTAGTGCAGCAT+TGG | 0.492888 | 4_1:-59852928 | None:intergenic |
CTACCAGGGTAGCCTGTAGC+AGG | 0.493617 | 4_1:-59853810 | None:intergenic |
ATGAGGCCGGATCCTGCTAC+AGG | 0.493861 | 4_1:+59853798 | Msa0560570:CDS |
CTTTAAATCATCACGCTCAA+AGG | 0.498511 | 4_1:-59854281 | None:intergenic |
AATGCTACTAGGGCCATGAT+TGG | 0.501422 | 4_1:+59852688 | Msa0560570:CDS |
GGTCTACAACAAACTGATGA+TGG | 0.502433 | 4_1:+59851264 | Msa0560570:CDS |
TTCGAGAAAGTACACTTGAC+AGG | 0.502478 | 4_1:+59854134 | Msa0560570:CDS |
TAGCCTTTGATATTCACCTC+AGG | 0.509602 | 4_1:+59854015 | Msa0560570:CDS |
TGTCTGCACTTCAGCAAACC+AGG | 0.511708 | 4_1:+59852552 | Msa0560570:CDS |
AGAAGTTGCAAATGTAGCTA+AGG | 0.511795 | 4_1:+59853073 | Msa0560570:CDS |
GCTTCCTTGTTTCAAACCAT+AGG | 0.512430 | 4_1:+59850980 | Msa0560570:CDS |
TTTACCTGCTAGAATGGACT+TGG | 0.512571 | 4_1:-59852185 | None:intergenic |
GTGGCAAATGGAAACTAAAT+GGG | 0.513107 | 4_1:+59851618 | Msa0560570:CDS |
GCTCGTGAAGCTGCAAGGCA+AGG | 0.513237 | 4_1:+59852580 | Msa0560570:CDS |
ACTGTCTTCTCATTTGGAGA+TGG | 0.513776 | 4_1:+59853858 | Msa0560570:CDS |
GCAGCTCCACCAGCTTCTCC+AGG | 0.518655 | 4_1:-59853191 | None:intergenic |
CTTGTTTCAAACCATAGGAA+AGG | 0.519277 | 4_1:+59850985 | Msa0560570:CDS |
ATAGGAAAACTGGTTGCTCC+AGG | 0.520085 | 4_1:-59850929 | None:intergenic |
ACTTGGCTGCAGCTTCCTCA+GGG | 0.522958 | 4_1:-59852168 | None:intergenic |
TAAAATCTGTATGTTCTACC+AGG | 0.524873 | 4_1:-59853825 | None:intergenic |
CAAACGTGATCCTCAGCTAA+AGG | 0.526847 | 4_1:-59853939 | None:intergenic |
CTCGTGAAGCTGCAAGGCAA+GGG | 0.532764 | 4_1:+59852581 | Msa0560570:CDS |
GCCCTAGTAGCATTAGCATT+GGG | 0.533958 | 4_1:-59852679 | None:intergenic |
TTGGGATTCCAAAATATGAA+TGG | 0.535603 | 4_1:+59850843 | Msa0560570:CDS |
CTGCACTAGACGATGCCAAA+AGG | 0.538204 | 4_1:+59852934 | Msa0560570:CDS |
GCAAGTAAAGGGTCTTCTCC+TGG | 0.538903 | 4_1:-59851213 | None:intergenic |
ATCACAAGCATTCTGTGGGT+TGG | 0.539372 | 4_1:+59853164 | Msa0560570:CDS |
GGAGTCTCTAACATTGGTCC+AGG | 0.541530 | 4_1:+59850884 | Msa0560570:CDS |
TGGATTCTTGGCAACATCGC+AGG | 0.541711 | 4_1:-59850690 | None:intergenic |
GACAGGAAAATCAGAAGCAC+TGG | 0.541961 | 4_1:+59854151 | Msa0560570:CDS |
CAGCCAGCAGCAAAGCTTGT+GGG | 0.542585 | 4_1:-59852888 | None:intergenic |
CAGAGGAAAACAGAGACGTT+AGG | 0.545414 | 4_1:-59850596 | None:intergenic |
GGCTATCCTGGAGAAGCTGG+TGG | 0.546561 | 4_1:+59853185 | Msa0560570:CDS |
TGTCGCAAAATTATTGTAGA+CGG | 0.546588 | 4_1:-59852461 | None:intergenic |
GGTGTCTGTTCCTTTAGCTG+AGG | 0.552719 | 4_1:+59853929 | Msa0560570:CDS |
AGCTAGCTCGTGAAGCTGCA+AGG | 0.553456 | 4_1:+59852575 | Msa0560570:CDS |
GGCCCTAGTAGCATTAGCAT+TGG | 0.555454 | 4_1:-59852680 | None:intergenic |
GTGTTAGGAGTGAAAGAAAG+AGG | 0.558538 | 4_1:-59850414 | None:intergenic |
ACAGAAGGTGCTGTCAAGCA+AGG | 0.561917 | 4_1:+59852409 | Msa0560570:CDS |
TTAATAGCTTTGGCATTCAG+AGG | 0.562815 | 4_1:-59852637 | None:intergenic |
GCAGCCAAGTCCATTCTAGC+AGG | 0.563938 | 4_1:+59852181 | Msa0560570:CDS |
TTCACTCCTAACACCCATCA+CGG | 0.567877 | 4_1:+59850423 | Msa0560570:five_prime_UTR |
AAAAGATCACAAGCATTCTG+TGG | 0.568704 | 4_1:+59853159 | Msa0560570:CDS |
GATCCTGAGGTGAATATCAA+AGG | 0.569135 | 4_1:-59854018 | None:intergenic |
AGGGATCCAAGATGGGGAAG+AGG | 0.570000 | 4_1:+59851180 | Msa0560570:CDS |
AAGGTTGACATTGCAAGAGA+AGG | 0.572395 | 4_1:+59850781 | Msa0560570:CDS |
AGCAATGCACAACGTCGGGT+TGG | 0.573033 | 4_1:+59851119 | Msa0560570:CDS |
AAGCAACCTTATGGAAACCT+TGG | 0.575163 | 4_1:+59852520 | Msa0560570:CDS |
GCCCAATGCTAATGCTACTA+GGG | 0.577253 | 4_1:+59852678 | Msa0560570:CDS |
TTGACATTGCAAGAGAAGGT+TGG | 0.577392 | 4_1:+59850785 | Msa0560570:CDS |
CAGAAGGTGCTGTCAAGCAA+GGG | 0.579821 | 4_1:+59852410 | Msa0560570:CDS |
GGAAAACATATGCTTCATGT+AGG | 0.580882 | 4_1:+59854245 | Msa0560570:CDS |
TTTGCGACATTAATGCGTCT+AGG | 0.581567 | 4_1:+59852475 | Msa0560570:CDS |
CAGCATATGATGTTGATGAC+TGG | 0.584387 | 4_1:+59851331 | Msa0560570:CDS |
AGATAGTGAACAACATGGGA+AGG | 0.585387 | 4_1:-59850364 | None:intergenic |
CACCTCAGGATCAAGAACAA+AGG | 0.587124 | 4_1:+59854029 | Msa0560570:CDS |
CATTTAGTTTCCATTTGCCA+CGG | 0.587656 | 4_1:-59851616 | None:intergenic |
TTTCTTGGCCGATATACAGA+AGG | 0.588531 | 4_1:+59852394 | Msa0560570:CDS |
AAAGATCACAAGCATTCTGT+GGG | 0.588555 | 4_1:+59853160 | Msa0560570:CDS |
CCCAAAGATGACATCAGCTA+TGG | 0.590854 | 4_1:-59853213 | None:intergenic |
GACCAATATGAACATGAGGC+CGG | 0.590969 | 4_1:+59853785 | Msa0560570:CDS |
AGAAATTGAGTGTGGATGCA+AGG | 0.597818 | 4_1:+59850741 | Msa0560570:CDS |
CTGTTGATGTAAGCAGACTT+GGG | 0.597835 | 4_1:+59850825 | Msa0560570:CDS |
TGTTGCCAAGAATCCAGCAT+TGG | 0.599346 | 4_1:+59850697 | Msa0560570:CDS |
CACAGCTCTTAAAAGGTGGT+TGG | 0.599474 | 4_1:-59851499 | None:intergenic |
TCACTCCTAACACCCATCAC+GGG | 0.599970 | 4_1:+59850424 | Msa0560570:five_prime_UTR |
TATGCAGCAGGGTACGTGAA+AGG | 0.600652 | 4_1:+59851243 | Msa0560570:CDS |
TAGAGGCAGAGAGTCATGAC+AGG | 0.601562 | 4_1:+59853009 | Msa0560570:CDS |
GGGTGAAAGACCTTGTGAGA+AGG | 0.601719 | 4_1:+59850762 | Msa0560570:CDS |
ATTTGCACCGACTACAATCA+CGG | 0.602874 | 4_1:-59852979 | None:intergenic |
ACTTTGTCTACATATGATTG+TGG | 0.603286 | 4_1:-59853756 | None:intergenic |
CATCAACAGCAGAATTCACA+AGG | 0.603921 | 4_1:-59850811 | None:intergenic |
GGTTGCTCCAGGTATAACAT+TGG | 0.604127 | 4_1:-59850918 | None:intergenic |
CTTCTTAAAGGTGTTATCCG+TGG | 0.607358 | 4_1:+59851599 | Msa0560570:CDS |
ACAGCCAGCAGCAAAGCTTG+TGG | 0.607399 | 4_1:-59852889 | None:intergenic |
GCGTTACACCTTCAATGCTG+TGG | 0.608802 | 4_1:+59851365 | Msa0560570:CDS |
CATAATGTCTGGAGGAGGCA+TGG | 0.611672 | 4_1:+59853112 | Msa0560570:CDS |
CTTGGCTGCAGCTTCCTCAG+GGG | 0.612324 | 4_1:-59852167 | None:intergenic |
CTTGCCATAATGTCTGGAGG+AGG | 0.615660 | 4_1:+59853107 | Msa0560570:CDS |
GAAGTTGCAAATGTAGCTAA+GGG | 0.617135 | 4_1:+59853074 | Msa0560570:CDS |
AAAGGTGATGTATATTTGCA+TGG | 0.623811 | 4_1:-59852843 | None:intergenic |
AAAGCCAACAAGTGTTTCTG+AGG | 0.625434 | 4_1:-59854113 | None:intergenic |
GAAATTGAGTGTGGATGCAA+GGG | 0.626342 | 4_1:+59850742 | Msa0560570:CDS |
GCAAGAGCAATGCACAACGT+CGG | 0.629064 | 4_1:+59851114 | Msa0560570:CDS |
GATGCAACCGTGATTGTAGT+CGG | 0.629741 | 4_1:+59852972 | Msa0560570:CDS |
TGTTTGTAATGATTTGAGTG+TGG | 0.631283 | 4_1:+59854190 | Msa0560570:CDS |
GGCAACAGAAAAGTTGCCCT+AGG | 0.635515 | 4_1:+59854224 | Msa0560570:CDS |
TGATTGTGGATACCATGTCA+TGG | 0.635666 | 4_1:-59853742 | None:intergenic |
GCTGCAATGAGAATAGGCAT+AGG | 0.636909 | 4_1:-59850947 | None:intergenic |
AAATATACATCACCTTTGCA+AGG | 0.638543 | 4_1:+59852849 | Msa0560570:CDS |
ATCACACAGCTCTTAAAAGG+TGG | 0.639170 | 4_1:-59851503 | None:intergenic |
AAAGGAACAGACACCAATTG+TGG | 0.639642 | 4_1:-59853921 | None:intergenic |
TGGAAGATAGTGAACAACAT+GGG | 0.639798 | 4_1:-59850368 | None:intergenic |
ACAGGATTGGATTTGAACTG+TGG | 0.643755 | 4_1:+59852367 | Msa0560570:intron |
GATTGTGGATACCATGTCAT+GGG | 0.644060 | 4_1:-59853741 | None:intergenic |
AAGGCTGTTAGGCCTTGCAA+AGG | 0.647052 | 4_1:-59852861 | None:intergenic |
TAACACCTTTAAGAAGATCA+GGG | 0.647148 | 4_1:-59851592 | None:intergenic |
GGATTCCAAAATATGAATGG+TGG | 0.648983 | 4_1:+59850846 | Msa0560570:CDS |
GATCCTGCTACAGGCTACCC+TGG | 0.649738 | 4_1:+59853807 | Msa0560570:CDS |
CAATGACCAATATGAACATG+AGG | 0.652360 | 4_1:+59853781 | Msa0560570:CDS |
ACCACAACTCAGCAAAAGTG+TGG | 0.657846 | 4_1:-59850636 | None:intergenic |
GCAATGTCAACCTTCTCACA+AGG | 0.660006 | 4_1:-59850772 | None:intergenic |
CAAACAGAACAAAGAAACAG+AGG | 0.661188 | 4_1:-59850613 | None:intergenic |
AGATCAGGGTCAGCACAAGT+CGG | 0.668758 | 4_1:-59851578 | None:intergenic |
TTGGAAGATAGTGAACAACA+TGG | 0.669298 | 4_1:-59850369 | None:intergenic |
AAAATCTGTATGTTCTACCA+GGG | 0.669451 | 4_1:-59853824 | None:intergenic |
GGAAGAGGTCAAGAAACACC+AGG | 0.670289 | 4_1:+59851195 | Msa0560570:CDS |
ATATTTAGGGATCCAAGATG+GGG | 0.672629 | 4_1:+59851174 | Msa0560570:CDS |
GTGGAAGGCTACCCATGACA+TGG | 0.674570 | 4_1:+59853730 | Msa0560570:CDS |
TATGATGTTGATGACTGGAA+AGG | 0.681867 | 4_1:+59851336 | Msa0560570:CDS |
GGTGCATTGTGCACTGCAGG+AGG | 0.684891 | 4_1:-59854092 | None:intergenic |
CTGCAACAAGAAATTGAGTG+TGG | 0.685493 | 4_1:+59850733 | Msa0560570:CDS |
GCCATGATTGGAAACTACGA+AGG | 0.687224 | 4_1:+59852700 | Msa0560570:CDS |
AATCACGGTTGCATCTGCTG+AGG | 0.690719 | 4_1:-59852964 | None:intergenic |
TTGCTAGCAAATATGCAGCA+GGG | 0.692959 | 4_1:+59851232 | Msa0560570:CDS |
ATTCTTGCCATAATGTCTGG+AGG | 0.713271 | 4_1:+59853104 | Msa0560570:CDS |
AACATGGGAAGGAATCTCTG+TGG | 0.741639 | 4_1:-59850353 | None:intergenic |
ACATTACACCAAGACCCCTG+AGG | 0.763610 | 4_1:+59852153 | Msa0560570:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AACTTTTAAATATTGTTTTA+TGG | + | chr4_1:59851063-59851082 | Msa0560570:intron | 10.0% |
!!! | ATATTTTGTTTATATTTGAA+TGG | - | chr4_1:59851686-59851705 | None:intergenic | 10.0% |
!!! | CATATAAAAGATAATTTTTT+TGG | - | chr4_1:59851852-59851871 | None:intergenic | 10.0% |
!! | AAAACACAAAAATAAGTAAA+AGG | - | chr4_1:59850534-59850553 | None:intergenic | 15.0% |
!!! | AATTTTTTTGGATGTAAATT+GGG | - | chr4_1:59851840-59851859 | None:intergenic | 15.0% |
!!! | TAATTTTTTTGGATGTAAAT+TGG | - | chr4_1:59851841-59851860 | None:intergenic | 15.0% |
!!! | ATTTTTCCTATAAAAGTTAT+AGG | - | chr4_1:59852743-59852762 | None:intergenic | 15.0% |
!! | CATATATTATTGAGAATTAT+TGG | - | chr4_1:59853598-59853617 | None:intergenic | 15.0% |
!!! | CAACTTAATTTTTTTTATTC+AGG | + | chr4_1:59853708-59853727 | Msa0560570:intron | 15.0% |
!!! | ATTTTTTAAGGAAATCAATA+AGG | - | chr4_1:59854336-59854355 | None:intergenic | 15.0% |
!! | TGATTTCCTTAAAAAATTTA+AGG | + | chr4_1:59854339-59854358 | Msa0560570:three_prime_UTR | 15.0% |
!! | GATTTCCTTAAAAAATTTAA+GGG | + | chr4_1:59854340-59854359 | Msa0560570:three_prime_UTR | 15.0% |
!! | AATTATATATGTCACATTAG+TGG | - | chr4_1:59850485-59850504 | None:intergenic | 20.0% |
!! | ACCAAACATTAACATATTTA+GGG | + | chr4_1:59851161-59851180 | Msa0560570:CDS | 20.0% |
!!! | TGTACAAATTTTGATTTTAC+AGG | + | chr4_1:59852349-59852368 | Msa0560570:intron | 20.0% |
!!! | AAATTTTGATTTTACAGGAT+TGG | + | chr4_1:59852354-59852373 | Msa0560570:intron | 20.0% |
!!! | CTTTTTATTAGTTTTAGCAA+AGG | - | chr4_1:59853144-59853163 | None:intergenic | 20.0% |
!! | AATGATAATTCTGTAATATG+AGG | - | chr4_1:59853278-59853297 | None:intergenic | 20.0% |
!!! | AACAACTTTGATTTTAAACT+CGG | + | chr4_1:59853371-59853390 | Msa0560570:intron | 20.0% |
!!! | CTTAATTTTTTTTATTCAGG+TGG | + | chr4_1:59853711-59853730 | Msa0560570:intron | 20.0% |
!!! | AGAACATACAGATTTTATAA+AGG | + | chr4_1:59853831-59853850 | Msa0560570:CDS | 20.0% |
!!! | GAACATACAGATTTTATAAA+GGG | + | chr4_1:59853832-59853851 | Msa0560570:CDS | 20.0% |
!!! | AACATACAGATTTTATAAAG+GGG | + | chr4_1:59853833-59853852 | Msa0560570:CDS | 20.0% |
!!! | CAATTTTTTAATGCAAGTTA+TGG | - | chr4_1:59854368-59854387 | None:intergenic | 20.0% |
!!! | TAAAAAAAATCAGTATTGAC+TGG | + | chr4_1:59854458-59854477 | Msa0560570:three_prime_UTR | 20.0% |
!!! | TCTTTTATTTCAGCTTTTCA+CGG | + | chr4_1:59850321-59850340 | Msa0560570:five_prime_UTR | 25.0% |
!!! | CTATTATATGTAGTTGCTTT+TGG | - | chr4_1:59850391-59850410 | None:intergenic | 25.0% |
!! | TTTGTGTTTTCAAATTCTCA+AGG | + | chr4_1:59850544-59850563 | Msa0560570:five_prime_UTR | 25.0% |
! | TATCATATACTGCATGTTAA+TGG | + | chr4_1:59851020-59851039 | Msa0560570:intron | 25.0% |
! | CACCAAACATTAACATATTT+AGG | + | chr4_1:59851160-59851179 | Msa0560570:CDS | 25.0% |
! | TCCCTAAATATGTTAATGTT+TGG | - | chr4_1:59851165-59851184 | None:intergenic | 25.0% |
!!! | TAATTGCTGTTGATTTTGTT+AGG | + | chr4_1:59851448-59851467 | Msa0560570:intron | 25.0% |
!! | TTTTCCATTTACTTGATTGT+AGG | - | chr4_1:59851558-59851577 | None:intergenic | 25.0% |
! | AGTGAGATAAAAGAATTAAG+AGG | - | chr4_1:59851663-59851682 | None:intergenic | 25.0% |
! | AAATCGAAAACAGAAAAGAA+TGG | - | chr4_1:59852040-59852059 | None:intergenic | 25.0% |
! | TTACACAATCACATATTCAT+AGG | + | chr4_1:59852223-59852242 | Msa0560570:intron | 25.0% |
!!! | AGCTTCTTTAGAATTATACA+AGG | + | chr4_1:59852303-59852322 | Msa0560570:intron | 25.0% |
! | ATTAAATCATTGGCAGTTAT+TGG | + | chr4_1:59852655-59852674 | Msa0560570:CDS | 25.0% |
! | TTAAATCATTGGCAGTTATT+GGG | + | chr4_1:59852656-59852675 | Msa0560570:CDS | 25.0% |
! | GAATTATCATTCCAATAACT+TGG | + | chr4_1:59853287-59853306 | Msa0560570:intron | 25.0% |
!!! | ATTTTTTTTATTCAGGTGGA+AGG | + | chr4_1:59853715-59853734 | Msa0560570:intron | 25.0% |
!!! | TGGTTCCCTTAAATTTTTTA+AGG | - | chr4_1:59854348-59854367 | None:intergenic | 25.0% |
!!! | TCACTTCTAAAACTTATTTC+TGG | - | chr4_1:59854394-59854413 | None:intergenic | 25.0% |
TCAAATTCTCAAGGTCATAA+TGG | + | chr4_1:59850553-59850572 | Msa0560570:exon | 30.0% | |
TTGGGATTCCAAAATATGAA+TGG | + | chr4_1:59850843-59850862 | Msa0560570:CDS | 30.0% | |
! | CATTTTTCCAATGTTATACC+TGG | + | chr4_1:59850911-59850930 | Msa0560570:CDS | 30.0% |
!! | GTTTTATGGCTATTTTGTGT+AGG | + | chr4_1:59851077-59851096 | Msa0560570:intron | 30.0% |
! | CATATTTGCTAGCAAGTAAA+GGG | - | chr4_1:59851227-59851246 | None:intergenic | 30.0% |
!! | AGCTAGTTAATGTGTTTTTG+AGG | + | chr4_1:59851418-59851437 | Msa0560570:intron | 30.0% |
TGTTCCTACAATCAAGTAAA+TGG | + | chr4_1:59851551-59851570 | Msa0560570:CDS | 30.0% | |
! | TAACACCTTTAAGAAGATCA+GGG | - | chr4_1:59851595-59851614 | None:intergenic | 30.0% |
! | ATAACACCTTTAAGAAGATC+AGG | - | chr4_1:59851596-59851615 | None:intergenic | 30.0% |
TGAAAACAAGCTATAGAATG+CGG | + | chr4_1:59851723-59851742 | Msa0560570:intron | 30.0% | |
TTGTTCACTGTAATTCTATC+CGG | + | chr4_1:59851776-59851795 | Msa0560570:intron | 30.0% | |
CAAAATAAACTCATGTTTGC+TGG | - | chr4_1:59851981-59852000 | None:intergenic | 30.0% | |
TGTCGCAAAATTATTGTAGA+CGG | - | chr4_1:59852464-59852483 | None:intergenic | 30.0% | |
TGCCAAAGCTATTAAATCAT+TGG | + | chr4_1:59852645-59852664 | Msa0560570:CDS | 30.0% | |
TGCCAATGATTTAATAGCTT+TGG | - | chr4_1:59852650-59852669 | None:intergenic | 30.0% | |
CCTATAAAAGTTATAGGAGT+GGG | - | chr4_1:59852737-59852756 | None:intergenic | 30.0% | |
TCCTATAAAAGTTATAGGAG+TGG | - | chr4_1:59852738-59852757 | None:intergenic | 30.0% | |
!! | AACAAGTTCTAAAACTTTGC+AGG | + | chr4_1:59852816-59852835 | Msa0560570:intron | 30.0% |
AAAGGTGATGTATATTTGCA+TGG | - | chr4_1:59852846-59852865 | None:intergenic | 30.0% | |
AAATATACATCACCTTTGCA+AGG | + | chr4_1:59852849-59852868 | Msa0560570:CDS | 30.0% | |
CAAAAGGAAATCCAAGTTAT+TGG | - | chr4_1:59853301-59853320 | None:intergenic | 30.0% | |
TGCTTGAAAATTGTGACAAA+AGG | - | chr4_1:59853317-59853336 | None:intergenic | 30.0% | |
!! | ATTTCAAGTTTGTAGCAACT+TGG | - | chr4_1:59853455-59853474 | None:intergenic | 30.0% |
TCAGTAGGATCTAATTACAT+GGG | + | chr4_1:59853674-59853693 | Msa0560570:intron | 30.0% | |
ACTTTGTCTACATATGATTG+TGG | - | chr4_1:59853759-59853778 | None:intergenic | 30.0% | |
AAAATCTGTATGTTCTACCA+GGG | - | chr4_1:59853827-59853846 | None:intergenic | 30.0% | |
TAAAATCTGTATGTTCTACC+AGG | - | chr4_1:59853828-59853847 | None:intergenic | 30.0% | |
TAGAGAACAAAAACACTGTT+TGG | - | chr4_1:59854070-59854089 | None:intergenic | 30.0% | |
TGTTTGTAATGATTTGAGTG+TGG | + | chr4_1:59854190-59854209 | Msa0560570:CDS | 30.0% | |
! | ATGAAGCATATGTTTTCCTA+GGG | - | chr4_1:59854243-59854262 | None:intergenic | 30.0% |
TGGAAGATAGTGAACAACAT+GGG | - | chr4_1:59850371-59850390 | None:intergenic | 35.0% | |
TTGGAAGATAGTGAACAACA+TGG | - | chr4_1:59850372-59850391 | None:intergenic | 35.0% | |
CAAACAGAACAAAGAAACAG+AGG | - | chr4_1:59850616-59850635 | None:intergenic | 35.0% | |
GGATTCCAAAATATGAATGG+TGG | + | chr4_1:59850846-59850865 | Msa0560570:CDS | 35.0% | |
! | TCAGACCACCATTCATATTT+TGG | - | chr4_1:59850854-59850873 | None:intergenic | 35.0% |
ACATTGGAAAAATGAGTTCC+TGG | - | chr4_1:59850905-59850924 | None:intergenic | 35.0% | |
AAAGAAGCTGCAATGAGAAT+AGG | - | chr4_1:59850956-59850975 | None:intergenic | 35.0% | |
! | CTTTCCTATGGTTTGAAACA+AGG | - | chr4_1:59850987-59851006 | None:intergenic | 35.0% |
CTTGTTTCAAACCATAGGAA+AGG | + | chr4_1:59850985-59851004 | Msa0560570:CDS | 35.0% | |
TTCAAACCATAGGAAAGGTA+AGG | + | chr4_1:59850990-59851009 | Msa0560570:intron | 35.0% | |
!! | TTATGGCTATTTTGTGTAGG+TGG | + | chr4_1:59851080-59851099 | Msa0560570:intron | 35.0% |
ACATATTTAGGGATCCAAGA+TGG | + | chr4_1:59851172-59851191 | Msa0560570:CDS | 35.0% | |
CATATTTAGGGATCCAAGAT+GGG | + | chr4_1:59851173-59851192 | Msa0560570:CDS | 35.0% | |
ATATTTAGGGATCCAAGATG+GGG | + | chr4_1:59851174-59851193 | Msa0560570:CDS | 35.0% | |
! | GCATATTTGCTAGCAAGTAA+AGG | - | chr4_1:59851228-59851247 | None:intergenic | 35.0% |
!! | TATGATGTTGATGACTGGAA+AGG | + | chr4_1:59851336-59851355 | Msa0560570:CDS | 35.0% |
! | ATACATTACCACAGCATTGA+AGG | - | chr4_1:59851376-59851395 | None:intergenic | 35.0% |
TCAATCACACAGCTCTTAAA+AGG | - | chr4_1:59851509-59851528 | None:intergenic | 35.0% | |
TTTAAGAGCTGTGTGATTGA+TGG | + | chr4_1:59851509-59851528 | Msa0560570:CDS | 35.0% | |
! | CATTTAGTTTCCATTTGCCA+CGG | - | chr4_1:59851619-59851638 | None:intergenic | 35.0% |
GTGGCAAATGGAAACTAAAT+GGG | + | chr4_1:59851618-59851637 | Msa0560570:CDS | 35.0% | |
TGTTCACTGTAATTCTATCC+GGG | + | chr4_1:59851777-59851796 | Msa0560570:intron | 35.0% | |
CAAAAACTAATTCCTCAACC+CGG | - | chr4_1:59851798-59851817 | None:intergenic | 35.0% | |
ATGTAGTTTACCTGCTAGAA+TGG | - | chr4_1:59852194-59852213 | None:intergenic | 35.0% | |
! | TTGAACTGTGGAAGTTTTCT+TGG | + | chr4_1:59852379-59852398 | Msa0560570:CDS | 35.0% |
ATTGTAGACGGCATTGTTAA+TGG | - | chr4_1:59852452-59852471 | None:intergenic | 35.0% | |
!! | TTAATAGCTTTGGCATTCAG+AGG | - | chr4_1:59852640-59852659 | None:intergenic | 35.0% |
! | CCCACTCCTATAACTTTTAT+AGG | + | chr4_1:59852734-59852753 | Msa0560570:intron | 35.0% |
AGGATTAACATACTTCTTCC+AGG | + | chr4_1:59853029-59853048 | Msa0560570:CDS | 35.0% | |
AGAAGTTGCAAATGTAGCTA+AGG | + | chr4_1:59853073-59853092 | Msa0560570:CDS | 35.0% | |
GAAGTTGCAAATGTAGCTAA+GGG | + | chr4_1:59853074-59853093 | Msa0560570:CDS | 35.0% | |
AAAAGATCACAAGCATTCTG+TGG | + | chr4_1:59853159-59853178 | Msa0560570:CDS | 35.0% | |
AAAGATCACAAGCATTCTGT+GGG | + | chr4_1:59853160-59853179 | Msa0560570:CDS | 35.0% | |
GTCGTTCAATCTTGATCTAA+TGG | + | chr4_1:59853427-59853446 | Msa0560570:intron | 35.0% | |
TTGCTAAATGCATGAATGTG+TGG | + | chr4_1:59853509-59853528 | Msa0560570:intron | 35.0% | |
TGAATGTGTGGAAATTGTGA+CGG | + | chr4_1:59853521-59853540 | Msa0560570:intron | 35.0% | |
ACGGCTTACAACCTAAATAA+TGG | + | chr4_1:59853540-59853559 | Msa0560570:intron | 35.0% | |
CATGAGCGAAACCATTATTT+AGG | - | chr4_1:59853554-59853573 | None:intergenic | 35.0% | |
AGAATTATTGGAACCTTGTG+GGG | - | chr4_1:59853586-59853605 | None:intergenic | 35.0% | |
GAGAATTATTGGAACCTTGT+GGG | - | chr4_1:59853587-59853606 | None:intergenic | 35.0% | |
TGAGAATTATTGGAACCTTG+TGG | - | chr4_1:59853588-59853607 | None:intergenic | 35.0% | |
CATGTAATTAGATCCTACTG+AGG | - | chr4_1:59853675-59853694 | None:intergenic | 35.0% | |
CTCAGTAGGATCTAATTACA+TGG | + | chr4_1:59853673-59853692 | Msa0560570:intron | 35.0% | |
AGGATCTAATTACATGGGTA+TGG | + | chr4_1:59853679-59853698 | Msa0560570:intron | 35.0% | |
CTCATGTTCATATTGGTCAT+TGG | - | chr4_1:59853783-59853802 | None:intergenic | 35.0% | |
CAATGACCAATATGAACATG+AGG | + | chr4_1:59853781-59853800 | Msa0560570:CDS | 35.0% | |
CTCAACTTTCGAGCATAAAT+TGG | + | chr4_1:59853890-59853909 | Msa0560570:CDS | 35.0% | |
! | ATTGGTTAAAGCACCACAAT+TGG | + | chr4_1:59853908-59853927 | Msa0560570:CDS | 35.0% |
! | ATCAAGCGACTTACATTTTG+AGG | - | chr4_1:59853970-59853989 | None:intergenic | 35.0% |
! | CATGAAGCATATGTTTTCCT+AGG | - | chr4_1:59854244-59854263 | None:intergenic | 35.0% |
GGAAAACATATGCTTCATGT+AGG | + | chr4_1:59854245-59854264 | Msa0560570:CDS | 35.0% | |
CTTTAAATCATCACGCTCAA+AGG | - | chr4_1:59854284-59854303 | None:intergenic | 35.0% | |
AGATAGTGAACAACATGGGA+AGG | - | chr4_1:59850367-59850386 | None:intergenic | 40.0% | |
GTGTTAGGAGTGAAAGAAAG+AGG | - | chr4_1:59850417-59850436 | None:intergenic | 40.0% | |
!! | ATTTTTCAGTAGCCCGTGAT+GGG | - | chr4_1:59850439-59850458 | None:intergenic | 40.0% |
! | AGGTGTTCTGTTTTCAACAG+AGG | - | chr4_1:59850579-59850598 | None:intergenic | 40.0% |
!! | AATCCAGCATTGGCGAATTA+CGG | + | chr4_1:59850707-59850726 | Msa0560570:CDS | 40.0% |
CTGCAACAAGAAATTGAGTG+TGG | + | chr4_1:59850733-59850752 | Msa0560570:CDS | 40.0% | |
AGAAATTGAGTGTGGATGCA+AGG | + | chr4_1:59850741-59850760 | Msa0560570:CDS | 40.0% | |
GAAATTGAGTGTGGATGCAA+GGG | + | chr4_1:59850742-59850761 | Msa0560570:CDS | 40.0% | |
AAGGTTGACATTGCAAGAGA+AGG | + | chr4_1:59850781-59850800 | Msa0560570:CDS | 40.0% | |
TTGACATTGCAAGAGAAGGT+TGG | + | chr4_1:59850785-59850804 | Msa0560570:CDS | 40.0% | |
CATCAACAGCAGAATTCACA+AGG | - | chr4_1:59850814-59850833 | None:intergenic | 40.0% | |
CTGTTGATGTAAGCAGACTT+GGG | + | chr4_1:59850825-59850844 | Msa0560570:CDS | 40.0% | |
CTTCATGGAGTCTCTAACAT+TGG | + | chr4_1:59850878-59850897 | Msa0560570:CDS | 40.0% | |
GAGAATAGGCATAGGAAAAC+TGG | - | chr4_1:59850942-59850961 | None:intergenic | 40.0% | |
! | GCTTCCTTGTTTCAAACCAT+AGG | + | chr4_1:59850980-59850999 | Msa0560570:CDS | 40.0% |
GAGAAACCTTACCTTTCCTA+TGG | - | chr4_1:59850999-59851018 | None:intergenic | 40.0% | |
! | TTTTGTGTAGGTGGTTTCGA+CGG | + | chr4_1:59851089-59851108 | Msa0560570:intron | 40.0% |
!! | GGTTGGCTGGTTTAACATAT+TGG | + | chr4_1:59851136-59851155 | Msa0560570:CDS | 40.0% |
TTGCTAGCAAATATGCAGCA+GGG | + | chr4_1:59851232-59851251 | Msa0560570:CDS | 40.0% | |
GGTCTACAACAAACTGATGA+TGG | + | chr4_1:59851264-59851283 | Msa0560570:CDS | 40.0% | |
TGGAGATTCCAACAAGCTTA+AGG | + | chr4_1:59851284-59851303 | Msa0560570:CDS | 40.0% | |
!! | CAGCATATGATGTTGATGAC+TGG | + | chr4_1:59851331-59851350 | Msa0560570:CDS | 40.0% |
ATCACACAGCTCTTAAAAGG+TGG | - | chr4_1:59851506-59851525 | None:intergenic | 40.0% | |
!! | CTTCTTAAAGGTGTTATCCG+TGG | + | chr4_1:59851599-59851618 | Msa0560570:CDS | 40.0% |
CGTGGCAAATGGAAACTAAA+TGG | + | chr4_1:59851617-59851636 | Msa0560570:CDS | 40.0% | |
! | TTTACCTGCTAGAATGGACT+TGG | - | chr4_1:59852188-59852207 | None:intergenic | 40.0% |
ACAGGATTGGATTTGAACTG+TGG | + | chr4_1:59852367-59852386 | Msa0560570:intron | 40.0% | |
TTTCTTGGCCGATATACAGA+AGG | + | chr4_1:59852394-59852413 | Msa0560570:CDS | 40.0% | |
TGACAGCACCTTCTGTATAT+CGG | - | chr4_1:59852405-59852424 | None:intergenic | 40.0% | |
TTTGCGACATTAATGCGTCT+AGG | + | chr4_1:59852475-59852494 | Msa0560570:CDS | 40.0% | |
ATGCGTCTAGGTTTCTTTGA+TGG | + | chr4_1:59852487-59852506 | Msa0560570:CDS | 40.0% | |
TTTCCATAAGGTTGCTTGCT+AGG | - | chr4_1:59852517-59852536 | None:intergenic | 40.0% | |
AAGCAACCTTATGGAAACCT+TGG | + | chr4_1:59852520-59852539 | Msa0560570:CDS | 40.0% | |
TTTGGACCAAGGTTTCCATA+AGG | - | chr4_1:59852529-59852548 | None:intergenic | 40.0% | |
!! | GTGTTGCTTAAAAACTGTGC+AGG | + | chr4_1:59852607-59852626 | Msa0560570:CDS | 40.0% |
ACCTTCGTAGTTTCCAATCA+TGG | - | chr4_1:59852704-59852723 | None:intergenic | 40.0% | |
!! | ATTTGCACCGACTACAATCA+CGG | - | chr4_1:59852982-59853001 | None:intergenic | 40.0% |
GACATTATGGCAAGAATCAC+AGG | - | chr4_1:59853101-59853120 | None:intergenic | 40.0% | |
GTGATTCTTGCCATAATGTC+TGG | + | chr4_1:59853101-59853120 | Msa0560570:CDS | 40.0% | |
ATTCTTGCCATAATGTCTGG+AGG | + | chr4_1:59853104-59853123 | Msa0560570:CDS | 40.0% | |
CCATAGCTGATGTCATCTTT+GGG | + | chr4_1:59853213-59853232 | Msa0560570:CDS | 40.0% | |
! | GTCAGTGAGATTGACTTACT+TGG | - | chr4_1:59853248-59853267 | None:intergenic | 40.0% |
ATGCAGTAAGACGAAGTTGT+TGG | + | chr4_1:59853344-59853363 | Msa0560570:intron | 40.0% | |
GCCATTAGATCAAGATCGAA+CGG | - | chr4_1:59853483-59853502 | None:intergenic | 40.0% | |
GATCTTGATCTAATGGCTTC+AGG | + | chr4_1:59853486-59853505 | Msa0560570:intron | 40.0% | |
AATTATTGGAACCTTGTGGG+GGG | - | chr4_1:59853584-59853603 | None:intergenic | 40.0% | |
GAATTATTGGAACCTTGTGG+GGG | - | chr4_1:59853585-59853604 | None:intergenic | 40.0% | |
GATTGTGGATACCATGTCAT+GGG | - | chr4_1:59853744-59853763 | None:intergenic | 40.0% | |
TGATTGTGGATACCATGTCA+TGG | - | chr4_1:59853745-59853764 | None:intergenic | 40.0% | |
ACTGTCTTCTCATTTGGAGA+TGG | + | chr4_1:59853858-59853877 | Msa0560570:CDS | 40.0% | |
AAAGGAACAGACACCAATTG+TGG | - | chr4_1:59853924-59853943 | None:intergenic | 40.0% | |
TGTAAGTCGCTTGATGTTGT+TGG | + | chr4_1:59853975-59853994 | Msa0560570:CDS | 40.0% | |
TAGCCTTTGATATTCACCTC+AGG | + | chr4_1:59854015-59854034 | Msa0560570:CDS | 40.0% | |
GATCCTGAGGTGAATATCAA+AGG | - | chr4_1:59854021-59854040 | None:intergenic | 40.0% | |
ACCTCAGGATCAAGAACAAA+GGG | + | chr4_1:59854030-59854049 | Msa0560570:CDS | 40.0% | |
! | AAAGCCAACAAGTGTTTCTG+AGG | - | chr4_1:59854116-59854135 | None:intergenic | 40.0% |
! | TTCGAGAAAGTACACTTGAC+AGG | + | chr4_1:59854134-59854153 | Msa0560570:CDS | 40.0% |
!! | TTGAGTGTGGTTGATGAACT+TGG | + | chr4_1:59854203-59854222 | Msa0560570:CDS | 40.0% |
AACATGGGAAGGAATCTCTG+TGG | - | chr4_1:59850356-59850375 | None:intergenic | 45.0% | |
TTCACTCCTAACACCCATCA+CGG | + | chr4_1:59850423-59850442 | Msa0560570:five_prime_UTR | 45.0% | |
!! | CATTTTTCAGTAGCCCGTGA+TGG | - | chr4_1:59850440-59850459 | None:intergenic | 45.0% |
CAGAGGAAAACAGAGACGTT+AGG | - | chr4_1:59850599-59850618 | None:intergenic | 45.0% | |
ACCACAACTCAGCAAAAGTG+TGG | - | chr4_1:59850639-59850658 | None:intergenic | 45.0% | |
AGGCGAAAACTGCAGATGTT+TGG | - | chr4_1:59850673-59850692 | None:intergenic | 45.0% | |
TGTTGCCAAGAATCCAGCAT+TGG | + | chr4_1:59850697-59850716 | Msa0560570:CDS | 45.0% | |
ATTCGCCAATGCTGGATTCT+TGG | - | chr4_1:59850705-59850724 | None:intergenic | 45.0% | |
!! | ATCCAGCATTGGCGAATTAC+GGG | + | chr4_1:59850708-59850727 | Msa0560570:CDS | 45.0% |
GCAATGTCAACCTTCTCACA+AGG | - | chr4_1:59850775-59850794 | None:intergenic | 45.0% | |
GCTGTTGATGTAAGCAGACT+TGG | + | chr4_1:59850824-59850843 | Msa0560570:CDS | 45.0% | |
GGTTGCTCCAGGTATAACAT+TGG | - | chr4_1:59850921-59850940 | None:intergenic | 45.0% | |
ATAGGAAAACTGGTTGCTCC+AGG | - | chr4_1:59850932-59850951 | None:intergenic | 45.0% | |
GCTGCAATGAGAATAGGCAT+AGG | - | chr4_1:59850950-59850969 | None:intergenic | 45.0% | |
CTTGCTAGCAAATATGCAGC+AGG | + | chr4_1:59851231-59851250 | Msa0560570:CDS | 45.0% | |
AGCAGCAACCTTAAGCTTGT+TGG | - | chr4_1:59851295-59851314 | None:intergenic | 45.0% | |
CACAGCTCTTAAAAGGTGGT+TGG | - | chr4_1:59851502-59851521 | None:intergenic | 45.0% | |
GCTGACCCTGATCTTCTTAA+AGG | + | chr4_1:59851587-59851606 | Msa0560570:CDS | 45.0% | |
! | AAGGTGTTATCCGTGGCAAA+TGG | + | chr4_1:59851606-59851625 | Msa0560570:CDS | 45.0% |
CTGTAATTCTATCCGGGTTG+AGG | + | chr4_1:59851783-59851802 | Msa0560570:intron | 45.0% | |
GATCCTAGCAAGCAACCTTA+TGG | + | chr4_1:59852511-59852530 | Msa0560570:CDS | 45.0% | |
! | TGCAGACATCTTTTGGACCA+AGG | - | chr4_1:59852540-59852559 | None:intergenic | 45.0% |
! | GCTGAAGTGCAGACATCTTT+TGG | - | chr4_1:59852547-59852566 | None:intergenic | 45.0% |
GCCCAATGCTAATGCTACTA+GGG | + | chr4_1:59852678-59852697 | Msa0560570:CDS | 45.0% | |
GCCCTAGTAGCATTAGCATT+GGG | - | chr4_1:59852682-59852701 | None:intergenic | 45.0% | |
AATGCTACTAGGGCCATGAT+TGG | + | chr4_1:59852688-59852707 | Msa0560570:CDS | 45.0% | |
GCCATGATTGGAAACTACGA+AGG | + | chr4_1:59852700-59852719 | Msa0560570:CDS | 45.0% | |
TTGTGGGAACTAAGGCTGTT+AGG | - | chr4_1:59852875-59852894 | None:intergenic | 45.0% | |
AGCAAAGCTTGTGGGAACTA+AGG | - | chr4_1:59852883-59852902 | None:intergenic | 45.0% | |
! | GCATTGGTGCATTGAACATC+AGG | - | chr4_1:59852915-59852934 | None:intergenic | 45.0% |
GATGCAACCGTGATTGTAGT+CGG | + | chr4_1:59852972-59852991 | Msa0560570:CDS | 45.0% | |
CGGTGCAAATCTTGCAATAG+AGG | + | chr4_1:59852992-59853011 | Msa0560570:CDS | 45.0% | |
ATCACAAGCATTCTGTGGGT+TGG | + | chr4_1:59853164-59853183 | Msa0560570:CDS | 45.0% | |
GCCATAGCTGATGTCATCTT+TGG | + | chr4_1:59853212-59853231 | Msa0560570:CDS | 45.0% | |
CCCAAAGATGACATCAGCTA+TGG | - | chr4_1:59853216-59853235 | None:intergenic | 45.0% | |
GCCGTTCGATCTTGATCTAA+TGG | + | chr4_1:59853479-59853498 | Msa0560570:intron | 45.0% | |
ATATGCTCAGTGACCTCAGT+AGG | + | chr4_1:59853659-59853678 | Msa0560570:intron | 45.0% | |
GACCAATATGAACATGAGGC+CGG | + | chr4_1:59853785-59853804 | Msa0560570:CDS | 45.0% | |
ATCCGGCCTCATGTTCATAT+TGG | - | chr4_1:59853790-59853809 | None:intergenic | 45.0% | |
GGGGAAACTGTCTTCTCATT+TGG | + | chr4_1:59853852-59853871 | Msa0560570:CDS | 45.0% | |
CAAACGTGATCCTCAGCTAA+AGG | - | chr4_1:59853942-59853961 | None:intergenic | 45.0% | |
CACCTCAGGATCAAGAACAA+AGG | + | chr4_1:59854029-59854048 | Msa0560570:CDS | 45.0% | |
TCCCTTTGTTCTTGATCCTG+AGG | - | chr4_1:59854034-59854053 | None:intergenic | 45.0% | |
TGCACCTCAGAAACACTTGT+TGG | + | chr4_1:59854109-59854128 | Msa0560570:CDS | 45.0% | |
! | GACAGGAAAATCAGAAGCAC+TGG | + | chr4_1:59854151-59854170 | Msa0560570:CDS | 45.0% |
TCACTCCTAACACCCATCAC+GGG | + | chr4_1:59850424-59850443 | Msa0560570:five_prime_UTR | 50.0% | |
! | GCCACACTTTTGCTGAGTTG+TGG | + | chr4_1:59850635-59850654 | Msa0560570:CDS | 50.0% |
TGGATTCTTGGCAACATCGC+AGG | - | chr4_1:59850693-59850712 | None:intergenic | 50.0% | |
AACCCGTAATTCGCCAATGC+TGG | - | chr4_1:59850713-59850732 | None:intergenic | 50.0% | |
GGGTGAAAGACCTTGTGAGA+AGG | + | chr4_1:59850762-59850781 | Msa0560570:CDS | 50.0% | |
! | TGGTGGTCTGAAGCACTTCA+TGG | + | chr4_1:59850863-59850882 | Msa0560570:CDS | 50.0% |
GGAGTCTCTAACATTGGTCC+AGG | + | chr4_1:59850884-59850903 | Msa0560570:CDS | 50.0% | |
GCAAGAGCAATGCACAACGT+CGG | + | chr4_1:59851114-59851133 | Msa0560570:CDS | 50.0% | |
CAAGAGCAATGCACAACGTC+GGG | + | chr4_1:59851115-59851134 | Msa0560570:CDS | 50.0% | |
TCTTGACCTCTTCCCCATCT+TGG | - | chr4_1:59851189-59851208 | None:intergenic | 50.0% | |
GGAAGAGGTCAAGAAACACC+AGG | + | chr4_1:59851195-59851214 | Msa0560570:CDS | 50.0% | |
GCAAGTAAAGGGTCTTCTCC+TGG | - | chr4_1:59851216-59851235 | None:intergenic | 50.0% | |
TATGCAGCAGGGTACGTGAA+AGG | + | chr4_1:59851243-59851262 | Msa0560570:CDS | 50.0% | |
GCGTTACACCTTCAATGCTG+TGG | + | chr4_1:59851365-59851384 | Msa0560570:CDS | 50.0% | |
AGATCAGGGTCAGCACAAGT+CGG | - | chr4_1:59851581-59851600 | None:intergenic | 50.0% | |
ACATTACACCAAGACCCCTG+AGG | + | chr4_1:59852153-59852172 | Msa0560570:CDS | 50.0% | |
!! | ACAGAAGGTGCTGTCAAGCA+AGG | + | chr4_1:59852409-59852428 | Msa0560570:CDS | 50.0% |
!! | CAGAAGGTGCTGTCAAGCAA+GGG | + | chr4_1:59852410-59852429 | Msa0560570:CDS | 50.0% |
GCTGTCAAGCAAGGGCTTAT+AGG | + | chr4_1:59852418-59852437 | Msa0560570:CDS | 50.0% | |
TGTCTGCACTTCAGCAAACC+AGG | + | chr4_1:59852552-59852571 | Msa0560570:CDS | 50.0% | |
GGCCCAATGCTAATGCTACT+AGG | + | chr4_1:59852677-59852696 | Msa0560570:CDS | 50.0% | |
GGCCCTAGTAGCATTAGCAT+TGG | - | chr4_1:59852683-59852702 | None:intergenic | 50.0% | |
AAGGCTGTTAGGCCTTGCAA+AGG | - | chr4_1:59852864-59852883 | None:intergenic | 50.0% | |
CTGCACTAGACGATGCCAAA+AGG | + | chr4_1:59852934-59852953 | Msa0560570:CDS | 50.0% | |
! | TGCTGAGGCTGCAATCCTTT+TGG | - | chr4_1:59852952-59852971 | None:intergenic | 50.0% |
AATCACGGTTGCATCTGCTG+AGG | - | chr4_1:59852967-59852986 | None:intergenic | 50.0% | |
TAGAGGCAGAGAGTCATGAC+AGG | + | chr4_1:59853009-59853028 | Msa0560570:CDS | 50.0% | |
ACTAACTGTTGCTGCTGTCC+TGG | - | chr4_1:59853050-59853069 | None:intergenic | 50.0% | |
CTTGCCATAATGTCTGGAGG+AGG | + | chr4_1:59853107-59853126 | Msa0560570:CDS | 50.0% | |
CATGCCTCCTCCAGACATTA+TGG | - | chr4_1:59853114-59853133 | None:intergenic | 50.0% | |
CATAATGTCTGGAGGAGGCA+TGG | + | chr4_1:59853112-59853131 | Msa0560570:CDS | 50.0% | |
!! | ATTCTGTGGGTTGGCTATCC+TGG | + | chr4_1:59853173-59853192 | Msa0560570:CDS | 50.0% |
CATGAAAATTGCCCCCCACA+AGG | + | chr4_1:59853570-59853589 | Msa0560570:intron | 50.0% | |
GGTGTCTGTTCCTTTAGCTG+AGG | + | chr4_1:59853929-59853948 | Msa0560570:CDS | 50.0% | |
GGCAACAGAAAAGTTGCCCT+AGG | + | chr4_1:59854224-59854243 | Msa0560570:CDS | 50.0% | |
!! | AGTAGCCCGTGATGGGTGTT+AGG | - | chr4_1:59850432-59850451 | None:intergenic | 55.0% |
AGCAATGCACAACGTCGGGT+TGG | + | chr4_1:59851119-59851138 | Msa0560570:CDS | 55.0% | |
AGGGATCCAAGATGGGGAAG+AGG | + | chr4_1:59851180-59851199 | Msa0560570:CDS | 55.0% | |
ACTTGGCTGCAGCTTCCTCA+GGG | - | chr4_1:59852171-59852190 | None:intergenic | 55.0% | |
GCAGCCAAGTCCATTCTAGC+AGG | + | chr4_1:59852181-59852200 | Msa0560570:CDS | 55.0% | |
AGCTAGCTCGTGAAGCTGCA+AGG | + | chr4_1:59852575-59852594 | Msa0560570:CDS | 55.0% | |
CTCGTGAAGCTGCAAGGCAA+GGG | + | chr4_1:59852581-59852600 | Msa0560570:CDS | 55.0% | |
GTTCCCACAAGCTTTGCTGC+TGG | + | chr4_1:59852885-59852904 | Msa0560570:CDS | 55.0% | |
CAGCCAGCAGCAAAGCTTGT+GGG | - | chr4_1:59852891-59852910 | None:intergenic | 55.0% | |
ACAGCCAGCAGCAAAGCTTG+TGG | - | chr4_1:59852892-59852911 | None:intergenic | 55.0% | |
GGCATCGTCTAGTGCAGCAT+TGG | - | chr4_1:59852931-59852950 | None:intergenic | 55.0% | |
GTTGGCTATCCTGGAGAAGC+TGG | + | chr4_1:59853182-59853201 | Msa0560570:CDS | 55.0% | |
GTGGAAGGCTACCCATGACA+TGG | + | chr4_1:59853730-59853749 | Msa0560570:CDS | 55.0% | |
TGAGGTGCATTGTGCACTGC+AGG | - | chr4_1:59854098-59854117 | None:intergenic | 55.0% | |
!! | ATGCACAACGTCGGGTTGGC+TGG | + | chr4_1:59851123-59851142 | Msa0560570:CDS | 60.0% |
TGCAGCTTCCTCAGGGGTCT+TGG | - | chr4_1:59852164-59852183 | None:intergenic | 60.0% | |
CTTGGCTGCAGCTTCCTCAG+GGG | - | chr4_1:59852170-59852189 | None:intergenic | 60.0% | |
GACTTGGCTGCAGCTTCCTC+AGG | - | chr4_1:59852172-59852191 | None:intergenic | 60.0% | |
CAGCTTCACGAGCTAGCTCC+TGG | - | chr4_1:59852573-59852592 | None:intergenic | 60.0% | |
GCTCGTGAAGCTGCAAGGCA+AGG | + | chr4_1:59852580-59852599 | Msa0560570:CDS | 60.0% | |
GGCTATCCTGGAGAAGCTGG+TGG | + | chr4_1:59853185-59853204 | Msa0560570:CDS | 60.0% | |
ATGAGGCCGGATCCTGCTAC+AGG | + | chr4_1:59853798-59853817 | Msa0560570:CDS | 60.0% | |
GGGTAGCCTGTAGCAGGATC+CGG | - | chr4_1:59853807-59853826 | None:intergenic | 60.0% | |
GATCCTGCTACAGGCTACCC+TGG | + | chr4_1:59853807-59853826 | Msa0560570:CDS | 60.0% | |
CTACCAGGGTAGCCTGTAGC+AGG | - | chr4_1:59853813-59853832 | None:intergenic | 60.0% | |
GGTGCATTGTGCACTGCAGG+AGG | - | chr4_1:59854095-59854114 | None:intergenic | 60.0% | |
GCAGCTCCACCAGCTTCTCC+AGG | - | chr4_1:59853194-59853213 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4_1 | gene | 59850311 | 59854483 | 59850311 | ID=Msa0560570;Name=Msa0560570 |
chr4_1 | mRNA | 59850311 | 59854483 | 59850311 | ID=Msa0560570-mRNA-1;Parent=Msa0560570;Name=Msa0560570-mRNA-1;_AED=0.06;_eAED=0.06;_QI=261|1|1|1|1|1|7|182|774 |
chr4_1 | exon | 59850311 | 59851006 | 59850311 | ID=Msa0560570-mRNA-1:exon:18565;Parent=Msa0560570-mRNA-1 |
chr4_1 | exon | 59851099 | 59851386 | 59851099 | ID=Msa0560570-mRNA-1:exon:18566;Parent=Msa0560570-mRNA-1 |
chr4_1 | exon | 59851470 | 59851639 | 59851470 | ID=Msa0560570-mRNA-1:exon:18567;Parent=Msa0560570-mRNA-1 |
chr4_1 | exon | 59852105 | 59852202 | 59852105 | ID=Msa0560570-mRNA-1:exon:18568;Parent=Msa0560570-mRNA-1 |
chr4_1 | exon | 59852371 | 59852721 | 59852371 | ID=Msa0560570-mRNA-1:exon:18569;Parent=Msa0560570-mRNA-1 |
chr4_1 | exon | 59852838 | 59853248 | 59852838 | ID=Msa0560570-mRNA-1:exon:18570;Parent=Msa0560570-mRNA-1 |
chr4_1 | exon | 59853730 | 59854483 | 59853730 | ID=Msa0560570-mRNA-1:exon:18571;Parent=Msa0560570-mRNA-1 |
chr4_1 | five_prime_UTR | 59850311 | 59850571 | 59850311 | ID=Msa0560570-mRNA-1:five_prime_utr;Parent=Msa0560570-mRNA-1 |
chr4_1 | CDS | 59850572 | 59851006 | 59850572 | ID=Msa0560570-mRNA-1:cds;Parent=Msa0560570-mRNA-1 |
chr4_1 | CDS | 59851099 | 59851386 | 59851099 | ID=Msa0560570-mRNA-1:cds;Parent=Msa0560570-mRNA-1 |
chr4_1 | CDS | 59851470 | 59851639 | 59851470 | ID=Msa0560570-mRNA-1:cds;Parent=Msa0560570-mRNA-1 |
chr4_1 | CDS | 59852105 | 59852202 | 59852105 | ID=Msa0560570-mRNA-1:cds;Parent=Msa0560570-mRNA-1 |
chr4_1 | CDS | 59852371 | 59852721 | 59852371 | ID=Msa0560570-mRNA-1:cds;Parent=Msa0560570-mRNA-1 |
chr4_1 | CDS | 59852838 | 59853248 | 59852838 | ID=Msa0560570-mRNA-1:cds;Parent=Msa0560570-mRNA-1 |
chr4_1 | CDS | 59853730 | 59854301 | 59853730 | ID=Msa0560570-mRNA-1:cds;Parent=Msa0560570-mRNA-1 |
chr4_1 | three_prime_UTR | 59854302 | 59854483 | 59854302 | ID=Msa0560570-mRNA-1:three_prime_utr;Parent=Msa0560570-mRNA-1 |
Gene Sequence |
Protein sequence |