Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0598520 | XP_003618299.1 | 98.679 | 530 | 7 | 0 | 1 | 530 | 1 | 530 | 0.0 | 1057 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0598520 | sp|Q0WUU6|PLT4_ARATH | 70.667 | 525 | 142 | 4 | 5 | 525 | 7 | 523 | 0.0 | 747 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0002680 | Msa0598520 | 0.800561 | 1.360245e-48 | -8.615850e-47 |
Msa0036540 | Msa0598520 | 0.801707 | 7.928907e-49 | -8.615850e-47 |
Msa0043500 | Msa0598520 | 0.803717 | 3.050512e-49 | -8.615850e-47 |
Msa0043650 | Msa0598520 | 0.806172 | 9.358564e-50 | -8.615850e-47 |
Msa0045550 | Msa0598520 | 0.803575 | 3.265144e-49 | -8.615850e-47 |
Msa0092410 | Msa0598520 | 0.821483 | 3.941438e-53 | -8.615850e-47 |
Msa0106620 | Msa0598520 | 0.839690 | 1.362663e-57 | -8.615850e-47 |
Msa0106710 | Msa0598520 | 0.821170 | 4.655909e-53 | -8.615850e-47 |
Msa0112270 | Msa0598520 | 0.850237 | 1.934074e-60 | -8.615850e-47 |
Msa0116790 | Msa0598520 | 0.814628 | 1.398412e-51 | -8.615850e-47 |
Msa0119440 | Msa0598520 | 0.805398 | 1.361213e-49 | -8.615850e-47 |
Msa0152560 | Msa0598520 | 0.802954 | 4.389343e-49 | -8.615850e-47 |
Msa0187830 | Msa0598520 | 0.815155 | 1.068799e-51 | -8.615850e-47 |
Msa0205010 | Msa0598520 | 0.811200 | 7.885740e-51 | -8.615850e-47 |
Msa0229920 | Msa0598520 | 0.803347 | 3.640418e-49 | -8.615850e-47 |
Msa0261170 | Msa0598520 | 0.801136 | 1.038363e-48 | -8.615850e-47 |
Msa0269560 | Msa0598520 | 0.816964 | 4.214131e-52 | -8.615850e-47 |
Msa0310440 | Msa0598520 | 0.800246 | 1.576690e-48 | -8.615850e-47 |
Msa0317970 | Msa0598520 | 0.821219 | 4.536093e-53 | -8.615850e-47 |
Msa0321690 | Msa0598520 | 0.802692 | 4.972217e-49 | -8.615850e-47 |
Msa0322900 | Msa0598520 | 0.825163 | 5.443630e-54 | -8.615850e-47 |
Msa0482940 | Msa0598520 | 0.813134 | 2.984324e-51 | -8.615850e-47 |
Msa0514610 | Msa0598520 | 0.813200 | 2.887180e-51 | -8.615850e-47 |
Msa0518030 | Msa0598520 | 0.814359 | 1.604195e-51 | -8.615850e-47 |
Msa0518170 | Msa0598520 | 0.801666 | 8.086127e-49 | -8.615850e-47 |
Msa0534400 | Msa0598520 | 0.811481 | 6.852966e-51 | -8.615850e-47 |
Msa0542470 | Msa0598520 | 0.971240 | 7.462329e-133 | -8.615850e-47 |
Msa0556010 | Msa0598520 | 0.805311 | 1.419503e-49 | -8.615850e-47 |
Msa0569780 | Msa0598520 | 0.805822 | 1.108975e-49 | -8.615850e-47 |
Msa0572750 | Msa0598520 | 0.805633 | 1.214862e-49 | -8.615850e-47 |
Msa0590640 | Msa0598520 | 0.807356 | 5.261134e-50 | -8.615850e-47 |
Msa0597770 | Msa0598520 | 0.805385 | 1.369351e-49 | -8.615850e-47 |
Msa0598520 | Msa0619420 | 0.819324 | 1.232761e-52 | -8.615850e-47 |
Msa0598520 | Msa0630940 | 0.831459 | 1.649063e-55 | -8.615850e-47 |
Msa0598520 | Msa0659790 | 0.804085 | 2.559032e-49 | -8.615850e-47 |
Msa0598520 | Msa0662940 | 0.963055 | 1.281291e-121 | -8.615850e-47 |
Msa0598520 | Msa0669180 | 0.818325 | 2.079581e-52 | -8.615850e-47 |
Msa0598520 | Msa0692880 | 0.808702 | 2.719608e-50 | -8.615850e-47 |
Msa0598520 | Msa0708310 | 0.801042 | 1.085159e-48 | -8.615850e-47 |
Msa0598520 | Msa0750250 | 0.817890 | 2.607847e-52 | -8.615850e-47 |
Msa0598520 | Msa0902830 | 0.804832 | 1.787560e-49 | -8.615850e-47 |
Msa0598520 | Msa0903780 | 0.803468 | 3.436979e-49 | -8.615850e-47 |
Msa0598520 | Msa0933760 | 0.802334 | 5.895080e-49 | -8.615850e-47 |
Msa0598520 | Msa0934140 | 0.820019 | 8.557631e-53 | -8.615850e-47 |
Msa0598520 | Msa1003340 | 0.833869 | 4.163088e-56 | -8.615850e-47 |
Msa0598520 | Msa1034500 | 0.806233 | 9.088212e-50 | -8.615850e-47 |
Msa0598520 | Msa1034700 | 0.808333 | 3.260456e-50 | -8.615850e-47 |
Msa0598520 | Msa1043330 | 0.972914 | 1.501391e-135 | -8.615850e-47 |
Msa0598520 | Msa1046440 | 0.833285 | 5.820953e-56 | -8.615850e-47 |
Msa0598520 | Msa1089450 | 0.809457 | 1.874705e-50 | -8.615850e-47 |
Msa0598520 | Msa1163880 | 0.806869 | 6.670788e-50 | -8.615850e-47 |
Msa0598520 | Msa1253660 | 0.804662 | 1.940230e-49 | -8.615850e-47 |
Msa0598520 | Msa1262010 | 0.808583 | 2.884332e-50 | -8.615850e-47 |
Msa0598520 | Msa1266330 | 0.803477 | 3.421932e-49 | -8.615850e-47 |
Msa0598520 | Msa1277080 | 0.804353 | 2.249614e-49 | -8.615850e-47 |
Msa0598520 | Msa1330270 | 0.801435 | 9.015523e-49 | -8.615850e-47 |
Msa0598520 | Msa1353890 | 0.801791 | 7.621321e-49 | -8.615850e-47 |
Msa0598520 | Msa1370590 | 0.812428 | 4.261285e-51 | -8.615850e-47 |
Msa0598520 | Msa1372280 | 0.811194 | 7.910577e-51 | -8.615850e-47 |
Msa0598520 | Msa1384100 | 0.811517 | 6.728883e-51 | -8.615850e-47 |
Msa0598520 | Msa1395730 | 0.815448 | 9.197332e-52 | -8.615850e-47 |
Msa0598520 | Msa1410420 | 0.826111 | 3.244796e-54 | -8.615850e-47 |
Msa0598520 | Msa1424630 | 0.809471 | 1.861912e-50 | -8.615850e-47 |
Msa0598520 | Msa1430550 | 0.815910 | 7.255622e-52 | -8.615850e-47 |
Msa0598520 | Msa1432130 | 0.809173 | 2.156297e-50 | -8.615850e-47 |
Msa0598520 | Msa1444120 | 0.817040 | 4.052606e-52 | -8.615850e-47 |
Msa0598520 | Msa1454530 | 0.819483 | 1.134496e-52 | -8.615850e-47 |
Msa0598520 | Msa1462360 | 0.805432 | 1.339053e-49 | -8.615850e-47 |
Msa0598520 | Msa1462470 | 0.800532 | 1.379019e-48 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0598520 | MtrunA17_Chr4g0021771 | 98.679 | 530 | 7 | 0 | 1 | 530 | 1 | 530 | 0.0 | 1057 |
Msa0598520 | MtrunA17_Chr2g0282031 | 66.027 | 521 | 172 | 1 | 4 | 524 | 7 | 522 | 0.0 | 698 |
Msa0598520 | MtrunA17_Chr3g0144361 | 49.896 | 481 | 221 | 4 | 42 | 502 | 11 | 491 | 1.47e-164 | 476 |
Msa0598520 | MtrunA17_Chr4g0034681 | 47.929 | 507 | 243 | 6 | 41 | 527 | 12 | 517 | 1.65e-164 | 477 |
Msa0598520 | MtrunA17_Chr6g0485661 | 47.660 | 470 | 241 | 2 | 30 | 494 | 33 | 502 | 1.75e-161 | 469 |
Msa0598520 | MtrunA17_Chr4g0036021 | 47.162 | 511 | 248 | 6 | 36 | 529 | 13 | 518 | 4.76e-161 | 468 |
Msa0598520 | MtrunA17_Chr8g0390521 | 46.996 | 466 | 239 | 5 | 45 | 502 | 6 | 471 | 1.32e-150 | 440 |
Msa0598520 | MtrunA17_Chr8g0373531 | 44.400 | 500 | 262 | 5 | 38 | 521 | 2 | 501 | 2.42e-148 | 435 |
Msa0598520 | MtrunA17_Chr5g0432581 | 45.122 | 492 | 251 | 6 | 41 | 515 | 5 | 494 | 7.11e-145 | 426 |
Msa0598520 | MtrunA17_Chr5g0403831 | 38.241 | 489 | 278 | 5 | 49 | 517 | 25 | 509 | 1.08e-111 | 341 |
Msa0598520 | MtrunA17_Chr7g0250881 | 34.221 | 488 | 296 | 10 | 18 | 499 | 31 | 499 | 1.34e-73 | 242 |
Msa0598520 | MtrunA17_Chr1g0213611 | 32.900 | 462 | 293 | 5 | 54 | 505 | 77 | 531 | 1.30e-72 | 241 |
Msa0598520 | MtrunA17_Chr6g0457781 | 33.874 | 493 | 303 | 10 | 18 | 505 | 71 | 545 | 6.07e-72 | 239 |
Msa0598520 | MtrunA17_Chr1g0213631 | 34.467 | 441 | 271 | 5 | 74 | 505 | 4 | 435 | 1.39e-71 | 235 |
Msa0598520 | MtrunA17_Chr7g0214451 | 32.484 | 471 | 297 | 8 | 46 | 505 | 22 | 482 | 1.18e-70 | 234 |
Msa0598520 | MtrunA17_Chr4g0032021 | 32.017 | 481 | 286 | 9 | 45 | 499 | 86 | 551 | 5.69e-69 | 231 |
Msa0598520 | MtrunA17_Chr4g0039651 | 29.191 | 507 | 317 | 13 | 17 | 499 | 9 | 497 | 5.23e-66 | 222 |
Msa0598520 | MtrunA17_Chr8g0373181 | 31.957 | 460 | 274 | 9 | 55 | 499 | 47 | 482 | 2.95e-64 | 217 |
Msa0598520 | MtrunA17_Chr7g0273281 | 31.062 | 499 | 286 | 12 | 28 | 500 | 27 | 493 | 4.64e-64 | 217 |
Msa0598520 | MtrunA17_Chr1g0155221 | 30.258 | 466 | 283 | 8 | 55 | 503 | 49 | 489 | 9.55e-60 | 205 |
Msa0598520 | MtrunA17_Chr7g0259471 | 29.630 | 486 | 311 | 11 | 21 | 499 | 9 | 470 | 2.36e-58 | 201 |
Msa0598520 | MtrunA17_Chr4g0066581 | 30.738 | 488 | 315 | 8 | 19 | 499 | 12 | 483 | 5.52e-58 | 200 |
Msa0598520 | MtrunA17_Chr2g0286721 | 29.857 | 489 | 315 | 9 | 19 | 499 | 12 | 480 | 1.40e-55 | 194 |
Msa0598520 | MtrunA17_Chr7g0259221 | 29.498 | 478 | 300 | 11 | 28 | 499 | 26 | 472 | 2.00e-55 | 193 |
Msa0598520 | MtrunA17_Chr8g0373191 | 28.571 | 504 | 296 | 11 | 16 | 502 | 1 | 457 | 2.63e-54 | 189 |
Msa0598520 | MtrunA17_Chr2g0290181 | 32.791 | 369 | 221 | 7 | 42 | 391 | 6 | 366 | 2.34e-51 | 184 |
Msa0598520 | MtrunA17_Chr2g0290181 | 41.304 | 92 | 54 | 0 | 413 | 504 | 467 | 558 | 1.38e-14 | 76.6 |
Msa0598520 | MtrunA17_Chr2g0303731 | 34.320 | 338 | 214 | 5 | 54 | 387 | 25 | 358 | 2.41e-51 | 184 |
Msa0598520 | MtrunA17_Chr2g0303731 | 43.750 | 96 | 54 | 0 | 410 | 505 | 461 | 556 | 3.90e-17 | 84.7 |
Msa0598520 | MtrunA17_Chr1g0205671 | 27.049 | 488 | 317 | 8 | 55 | 514 | 23 | 499 | 3.12e-51 | 182 |
Msa0598520 | MtrunA17_Chr1g0205681 | 27.835 | 485 | 309 | 9 | 51 | 506 | 20 | 492 | 3.10e-50 | 179 |
Msa0598520 | MtrunA17_Chr3g0115781 | 26.349 | 482 | 309 | 12 | 55 | 505 | 26 | 492 | 3.48e-50 | 180 |
Msa0598520 | MtrunA17_Chr3g0078971 | 25.996 | 477 | 318 | 10 | 55 | 506 | 24 | 490 | 7.10e-50 | 179 |
Msa0598520 | MtrunA17_Chr5g0420841 | 28.257 | 499 | 312 | 12 | 51 | 517 | 18 | 502 | 7.81e-50 | 179 |
Msa0598520 | MtrunA17_Chr8g0390141 | 27.381 | 504 | 321 | 12 | 47 | 520 | 19 | 507 | 1.35e-49 | 178 |
Msa0598520 | MtrunA17_Chr3g0119401 | 29.268 | 492 | 319 | 13 | 21 | 499 | 54 | 529 | 1.90e-49 | 178 |
Msa0598520 | MtrunA17_Chr5g0394341 | 26.052 | 499 | 326 | 11 | 55 | 524 | 23 | 507 | 2.41e-49 | 177 |
Msa0598520 | MtrunA17_Chr3g0115721 | 27.108 | 498 | 321 | 12 | 51 | 520 | 20 | 503 | 2.67e-49 | 177 |
Msa0598520 | MtrunA17_Chr6g0486681 | 27.197 | 478 | 312 | 11 | 54 | 505 | 25 | 492 | 2.79e-48 | 174 |
Msa0598520 | MtrunA17_Chr6g0486671 | 27.197 | 478 | 312 | 11 | 54 | 505 | 25 | 492 | 2.79e-48 | 174 |
Msa0598520 | MtrunA17_Chr5g0417611 | 26.653 | 484 | 316 | 11 | 51 | 505 | 20 | 493 | 5.23e-48 | 174 |
Msa0598520 | MtrunA17_Chr4g0065311 | 26.347 | 501 | 321 | 11 | 36 | 505 | 2 | 485 | 7.30e-48 | 173 |
Msa0598520 | MtrunA17_Chr3g0085971 | 27.701 | 509 | 320 | 12 | 51 | 526 | 18 | 511 | 6.61e-47 | 171 |
Msa0598520 | MtrunA17_Chr3g0115711 | 27.801 | 482 | 311 | 11 | 43 | 498 | 12 | 482 | 6.77e-47 | 171 |
Msa0598520 | MtrunA17_Chr8g0376631 | 33.951 | 324 | 204 | 7 | 54 | 372 | 25 | 343 | 8.09e-47 | 172 |
Msa0598520 | MtrunA17_Chr8g0376631 | 45.833 | 96 | 52 | 0 | 410 | 505 | 460 | 555 | 1.71e-17 | 85.5 |
Msa0598520 | MtrunA17_Chr8g0390261 | 26.337 | 505 | 311 | 14 | 54 | 520 | 25 | 506 | 1.60e-46 | 170 |
Msa0598520 | MtrunA17_Chr1g0205691 | 25.761 | 493 | 316 | 10 | 62 | 520 | 29 | 505 | 3.38e-46 | 169 |
Msa0598520 | MtrunA17_Chr2g0303701 | 33.429 | 350 | 221 | 6 | 54 | 398 | 25 | 367 | 2.56e-45 | 167 |
Msa0598520 | MtrunA17_Chr1g0164851 | 27.066 | 484 | 306 | 10 | 54 | 505 | 22 | 490 | 3.08e-45 | 167 |
Msa0598520 | MtrunA17_Chr1g0164871 | 26.860 | 484 | 307 | 10 | 54 | 505 | 22 | 490 | 4.09e-45 | 166 |
Msa0598520 | MtrunA17_Chr4g0048411 | 27.202 | 511 | 320 | 12 | 45 | 516 | 14 | 511 | 1.34e-44 | 164 |
Msa0598520 | MtrunA17_Chr4g0065324 | 26.166 | 493 | 314 | 11 | 45 | 505 | 19 | 493 | 2.13e-44 | 164 |
Msa0598520 | MtrunA17_Chr4g0048051 | 27.345 | 501 | 315 | 12 | 54 | 516 | 22 | 511 | 2.19e-44 | 164 |
Msa0598520 | MtrunA17_Chr8g0376601 | 32.565 | 347 | 221 | 8 | 46 | 387 | 20 | 358 | 4.12e-44 | 164 |
Msa0598520 | MtrunA17_Chr8g0376601 | 45.783 | 83 | 45 | 0 | 410 | 492 | 459 | 541 | 8.44e-13 | 70.9 |
Msa0598520 | MtrunA17_Chr3g0115741 | 25.207 | 484 | 320 | 11 | 51 | 505 | 23 | 493 | 4.44e-44 | 163 |
Msa0598520 | MtrunA17_Chr3g0128171 | 26.253 | 419 | 291 | 8 | 101 | 511 | 42 | 450 | 1.26e-43 | 160 |
Msa0598520 | MtrunA17_Chr3g0121674 | 32.459 | 305 | 191 | 4 | 216 | 514 | 1 | 296 | 1.30e-43 | 157 |
Msa0598520 | MtrunA17_Chr3g0078991 | 25.153 | 489 | 331 | 10 | 45 | 506 | 11 | 491 | 2.41e-43 | 161 |
Msa0598520 | MtrunA17_Chr4g0004821 | 28.958 | 480 | 303 | 11 | 33 | 500 | 17 | 470 | 2.83e-43 | 160 |
Msa0598520 | MtrunA17_Chr3g0115751 | 25.364 | 481 | 317 | 11 | 51 | 502 | 25 | 492 | 1.41e-42 | 159 |
Msa0598520 | MtrunA17_Chr6g0486021 | 29.400 | 500 | 303 | 15 | 24 | 500 | 12 | 484 | 6.76e-42 | 156 |
Msa0598520 | MtrunA17_Chr3g0078791 | 26.442 | 416 | 263 | 7 | 101 | 505 | 34 | 417 | 4.45e-41 | 153 |
Msa0598520 | MtrunA17_Chr5g0445601 | 24.138 | 493 | 336 | 9 | 39 | 505 | 11 | 491 | 6.47e-41 | 154 |
Msa0598520 | MtrunA17_Chr3g0128081 | 25.261 | 479 | 308 | 10 | 62 | 505 | 29 | 492 | 3.48e-40 | 152 |
Msa0598520 | MtrunA17_Chr8g0376611 | 33.212 | 274 | 178 | 4 | 105 | 377 | 12 | 281 | 4.38e-40 | 152 |
Msa0598520 | MtrunA17_Chr8g0376611 | 41.667 | 96 | 56 | 0 | 410 | 505 | 391 | 486 | 1.80e-16 | 82.0 |
Msa0598520 | MtrunA17_Chr7g0257631 | 24.089 | 494 | 337 | 9 | 38 | 505 | 44 | 525 | 1.92e-38 | 147 |
Msa0598520 | MtrunA17_Chr5g0437021 | 25.197 | 508 | 306 | 12 | 42 | 505 | 13 | 490 | 8.37e-38 | 145 |
Msa0598520 | MtrunA17_Chr2g0290161 | 32.414 | 290 | 148 | 6 | 112 | 390 | 20 | 272 | 1.15e-35 | 139 |
Msa0598520 | MtrunA17_Chr7g0273261 | 34.821 | 224 | 126 | 6 | 301 | 516 | 40 | 251 | 8.87e-33 | 125 |
Msa0598520 | MtrunA17_Chr3g0144261 | 33.333 | 234 | 153 | 3 | 53 | 285 | 2 | 233 | 1.25e-32 | 132 |
Msa0598520 | MtrunA17_Chr3g0144261 | 31.200 | 250 | 156 | 7 | 265 | 502 | 472 | 717 | 4.26e-21 | 97.4 |
Msa0598520 | MtrunA17_Chr3g0115731 | 24.165 | 509 | 310 | 14 | 49 | 522 | 18 | 485 | 3.19e-32 | 129 |
Msa0598520 | MtrunA17_Chr5g0407441 | 34.842 | 221 | 138 | 5 | 55 | 270 | 4 | 223 | 5.51e-30 | 124 |
Msa0598520 | MtrunA17_Chr5g0407441 | 31.276 | 243 | 152 | 7 | 287 | 517 | 487 | 726 | 4.90e-18 | 87.8 |
Msa0598520 | MtrunA17_Chr8g0370141 | 33.468 | 248 | 157 | 7 | 53 | 294 | 2 | 247 | 1.26e-28 | 117 |
Msa0598520 | MtrunA17_Chr4g0065351 | 25.278 | 360 | 248 | 9 | 173 | 525 | 1 | 346 | 2.24e-28 | 116 |
Msa0598520 | MtrunA17_Chr5g0404191 | 26.357 | 258 | 178 | 3 | 17 | 274 | 17 | 262 | 6.60e-28 | 113 |
Msa0598520 | MtrunA17_Chr3g0146061 | 33.645 | 214 | 127 | 5 | 66 | 276 | 15 | 216 | 3.32e-27 | 116 |
Msa0598520 | MtrunA17_Chr3g0146061 | 34.071 | 226 | 136 | 5 | 287 | 502 | 505 | 727 | 3.65e-23 | 103 |
Msa0598520 | MtrunA17_Chr5g0419321 | 33.333 | 183 | 118 | 3 | 77 | 256 | 54 | 235 | 3.89e-25 | 109 |
Msa0598520 | MtrunA17_Chr5g0419321 | 28.679 | 265 | 170 | 7 | 254 | 502 | 474 | 735 | 4.30e-18 | 87.8 |
Msa0598520 | MtrunA17_Chr5g0434231 | 33.516 | 182 | 85 | 4 | 97 | 272 | 1 | 152 | 1.60e-20 | 88.6 |
Msa0598520 | MtrunA17_Chr7g0273271 | 27.477 | 222 | 143 | 3 | 21 | 241 | 2 | 206 | 1.82e-20 | 90.1 |
Msa0598520 | MtrunA17_Chr5g0404181 | 36.567 | 134 | 75 | 4 | 378 | 503 | 1 | 132 | 9.88e-18 | 79.7 |
Msa0598520 | MtrunA17_Chr5g0434251 | 39.583 | 96 | 58 | 0 | 410 | 505 | 47 | 142 | 3.79e-17 | 79.0 |
Msa0598520 | MtrunA17_Chr1g0186831 | 24.533 | 428 | 279 | 13 | 105 | 495 | 80 | 500 | 1.29e-15 | 79.7 |
Msa0598520 | MtrunA17_Chr8g0370151 | 26.512 | 215 | 149 | 1 | 297 | 502 | 134 | 348 | 2.45e-14 | 74.7 |
Msa0598520 | MtrunA17_Chr3g0120761 | 23.928 | 443 | 279 | 14 | 104 | 495 | 76 | 511 | 6.10e-13 | 71.2 |
Msa0598520 | MtrunA17_Chr5g0434261 | 45.783 | 83 | 45 | 0 | 410 | 492 | 221 | 303 | 8.26e-13 | 69.7 |
Msa0598520 | MtrunA17_Chr4g0042131 | 25.481 | 416 | 245 | 21 | 102 | 495 | 35 | 407 | 8.74e-13 | 70.5 |
Msa0598520 | MtrunA17_Chr1g0183921 | 23.146 | 445 | 291 | 14 | 99 | 499 | 75 | 512 | 1.09e-12 | 70.5 |
Msa0598520 | MtrunA17_Chr5g0446681 | 29.936 | 157 | 93 | 3 | 38 | 194 | 6 | 145 | 4.12e-12 | 67.0 |
Msa0598520 | MtrunA17_Chr4g0000061 | 25.170 | 441 | 249 | 19 | 106 | 497 | 80 | 488 | 1.59e-11 | 66.6 |
Msa0598520 | MtrunA17_Chr1g0186821 | 24.094 | 469 | 294 | 16 | 104 | 519 | 75 | 534 | 1.76e-11 | 66.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0598520 | AT2G20780.1 | 70.667 | 525 | 142 | 4 | 5 | 525 | 7 | 523 | 0.0 | 747 |
Msa0598520 | AT2G20780.2 | 73.529 | 442 | 115 | 1 | 84 | 525 | 26 | 465 | 0.0 | 665 |
Msa0598520 | AT3G18830.1 | 47.870 | 493 | 239 | 4 | 47 | 524 | 31 | 520 | 2.05e-160 | 467 |
Msa0598520 | AT2G16120.1 | 47.368 | 494 | 239 | 4 | 45 | 517 | 16 | 509 | 1.42e-156 | 456 |
Msa0598520 | AT2G16130.1 | 47.358 | 492 | 236 | 4 | 45 | 513 | 16 | 507 | 1.41e-155 | 454 |
Msa0598520 | AT4G36670.1 | 46.737 | 475 | 238 | 4 | 46 | 505 | 8 | 482 | 1.96e-150 | 440 |
Msa0598520 | AT2G18480.1 | 47.170 | 477 | 238 | 4 | 40 | 502 | 7 | 483 | 8.05e-148 | 434 |
Msa0598520 | AT2G43330.1 | 32.535 | 501 | 314 | 9 | 37 | 524 | 16 | 505 | 3.08e-71 | 236 |
Msa0598520 | AT5G17010.1 | 29.423 | 503 | 313 | 9 | 21 | 499 | 15 | 499 | 4.99e-69 | 230 |
Msa0598520 | AT5G17010.3 | 29.423 | 503 | 313 | 9 | 21 | 499 | 15 | 499 | 4.99e-69 | 230 |
Msa0598520 | AT5G17010.4 | 29.423 | 503 | 313 | 9 | 21 | 499 | 15 | 499 | 4.99e-69 | 230 |
Msa0598520 | AT5G16150.2 | 33.608 | 485 | 296 | 11 | 23 | 500 | 75 | 540 | 2.31e-67 | 227 |
Msa0598520 | AT5G16150.1 | 33.608 | 485 | 296 | 11 | 23 | 500 | 75 | 540 | 2.31e-67 | 227 |
Msa0598520 | AT5G16150.3 | 33.608 | 485 | 296 | 11 | 23 | 500 | 75 | 540 | 2.31e-67 | 227 |
Msa0598520 | AT1G75220.1 | 30.478 | 502 | 303 | 10 | 17 | 503 | 17 | 487 | 8.16e-65 | 219 |
Msa0598520 | AT3G05150.1 | 30.738 | 488 | 307 | 9 | 21 | 501 | 5 | 468 | 1.44e-63 | 215 |
Msa0598520 | AT3G05150.3 | 30.738 | 488 | 307 | 9 | 21 | 501 | 5 | 468 | 1.44e-63 | 215 |
Msa0598520 | AT3G05150.2 | 30.738 | 488 | 307 | 9 | 21 | 501 | 5 | 468 | 2.11e-63 | 215 |
Msa0598520 | AT5G59250.1 | 30.595 | 487 | 307 | 10 | 34 | 499 | 77 | 553 | 2.75e-63 | 216 |
Msa0598520 | AT1G19450.1 | 30.291 | 515 | 320 | 14 | 1 | 503 | 1 | 488 | 5.02e-63 | 214 |
Msa0598520 | AT1G08930.1 | 29.637 | 496 | 311 | 10 | 22 | 505 | 25 | 494 | 9.34e-62 | 211 |
Msa0598520 | AT1G08930.2 | 29.637 | 496 | 311 | 10 | 22 | 505 | 25 | 494 | 9.34e-62 | 211 |
Msa0598520 | AT3G03090.1 | 29.941 | 511 | 309 | 12 | 21 | 499 | 6 | 499 | 4.49e-61 | 209 |
Msa0598520 | AT3G05160.1 | 28.936 | 470 | 298 | 9 | 40 | 499 | 8 | 451 | 4.95e-61 | 208 |
Msa0598520 | AT3G05165.3 | 28.601 | 479 | 312 | 8 | 31 | 499 | 2 | 460 | 2.03e-60 | 206 |
Msa0598520 | AT3G05165.2 | 28.601 | 479 | 312 | 8 | 31 | 499 | 2 | 460 | 2.03e-60 | 206 |
Msa0598520 | AT3G05165.1 | 28.601 | 479 | 312 | 8 | 31 | 499 | 2 | 460 | 2.03e-60 | 206 |
Msa0598520 | AT5G27360.1 | 29.400 | 483 | 313 | 11 | 27 | 499 | 1 | 465 | 4.39e-60 | 206 |
Msa0598520 | AT2G48020.2 | 31.195 | 452 | 279 | 10 | 54 | 499 | 33 | 458 | 1.07e-59 | 204 |
Msa0598520 | AT2G48020.1 | 31.195 | 452 | 279 | 10 | 54 | 499 | 33 | 458 | 1.07e-59 | 204 |
Msa0598520 | AT5G27360.3 | 29.400 | 483 | 313 | 11 | 27 | 499 | 49 | 513 | 2.18e-59 | 205 |
Msa0598520 | AT5G18840.1 | 31.377 | 494 | 301 | 11 | 22 | 505 | 16 | 481 | 5.25e-59 | 203 |
Msa0598520 | AT5G27350.1 | 29.873 | 472 | 293 | 12 | 43 | 500 | 15 | 462 | 1.45e-58 | 202 |
Msa0598520 | AT1G54730.2 | 30.496 | 423 | 268 | 9 | 83 | 499 | 60 | 462 | 4.42e-57 | 197 |
Msa0598520 | AT3G05160.3 | 29.454 | 421 | 271 | 7 | 85 | 499 | 2 | 402 | 7.20e-57 | 196 |
Msa0598520 | AT3G05160.2 | 29.454 | 421 | 271 | 7 | 85 | 499 | 2 | 402 | 7.20e-57 | 196 |
Msa0598520 | AT3G05155.1 | 30.149 | 471 | 280 | 11 | 45 | 499 | 18 | 455 | 2.50e-56 | 195 |
Msa0598520 | AT4G04760.1 | 30.573 | 471 | 283 | 12 | 51 | 505 | 28 | 470 | 6.12e-56 | 195 |
Msa0598520 | AT4G04760.3 | 31.019 | 432 | 265 | 9 | 85 | 505 | 2 | 411 | 2.38e-55 | 192 |
Msa0598520 | AT5G26250.1 | 29.518 | 498 | 314 | 12 | 54 | 526 | 21 | 506 | 1.05e-54 | 192 |
Msa0598520 | AT4G04750.3 | 28.599 | 514 | 321 | 14 | 14 | 505 | 29 | 518 | 2.12e-53 | 189 |
Msa0598520 | AT4G04750.1 | 29.025 | 472 | 300 | 12 | 45 | 505 | 27 | 474 | 4.69e-53 | 187 |
Msa0598520 | AT4G04750.2 | 29.025 | 472 | 300 | 12 | 45 | 505 | 27 | 474 | 4.69e-53 | 187 |
Msa0598520 | AT3G19940.1 | 27.708 | 480 | 308 | 11 | 54 | 505 | 24 | 492 | 2.50e-51 | 183 |
Msa0598520 | AT4G04760.2 | 29.336 | 467 | 291 | 12 | 51 | 505 | 28 | 467 | 3.64e-51 | 182 |
Msa0598520 | AT1G50310.1 | 27.140 | 479 | 313 | 11 | 54 | 505 | 24 | 493 | 5.14e-51 | 182 |
Msa0598520 | AT1G08900.5 | 30.879 | 421 | 269 | 8 | 83 | 499 | 11 | 413 | 1.29e-50 | 179 |
Msa0598520 | AT1G08900.3 | 30.166 | 421 | 272 | 8 | 83 | 499 | 45 | 447 | 2.19e-50 | 179 |
Msa0598520 | AT1G77210.2 | 26.577 | 523 | 321 | 18 | 35 | 520 | 8 | 504 | 2.45e-50 | 180 |
Msa0598520 | AT1G77210.1 | 26.577 | 523 | 321 | 18 | 35 | 520 | 8 | 504 | 2.45e-50 | 180 |
Msa0598520 | AT1G08900.1 | 28.392 | 479 | 312 | 10 | 25 | 499 | 4 | 455 | 2.58e-50 | 179 |
Msa0598520 | AT1G08900.2 | 28.392 | 479 | 312 | 10 | 25 | 499 | 4 | 455 | 2.58e-50 | 179 |
Msa0598520 | AT1G08890.1 | 29.677 | 465 | 295 | 11 | 45 | 499 | 15 | 457 | 3.07e-50 | 179 |
Msa0598520 | AT1G05030.1 | 30.159 | 441 | 295 | 7 | 62 | 500 | 86 | 515 | 3.54e-49 | 177 |
Msa0598520 | AT5G26340.1 | 26.600 | 500 | 326 | 10 | 55 | 525 | 24 | 511 | 3.67e-49 | 177 |
Msa0598520 | AT3G05960.1 | 27.108 | 498 | 329 | 10 | 54 | 527 | 20 | 507 | 3.80e-49 | 177 |
Msa0598520 | AT1G30220.1 | 33.435 | 329 | 211 | 5 | 54 | 378 | 27 | 351 | 1.12e-48 | 177 |
Msa0598520 | AT1G30220.1 | 45.833 | 96 | 52 | 0 | 410 | 505 | 464 | 559 | 1.49e-18 | 89.4 |
Msa0598520 | AT1G08920.1 | 28.511 | 470 | 296 | 11 | 45 | 499 | 18 | 462 | 1.79e-48 | 174 |
Msa0598520 | AT5G27360.2 | 31.351 | 370 | 232 | 9 | 134 | 499 | 10 | 361 | 1.89e-48 | 172 |
Msa0598520 | AT5G27360.5 | 31.351 | 370 | 232 | 9 | 134 | 499 | 10 | 361 | 1.89e-48 | 172 |
Msa0598520 | AT3G05165.6 | 28.571 | 427 | 270 | 8 | 40 | 456 | 17 | 418 | 7.72e-48 | 174 |
Msa0598520 | AT3G05165.4 | 27.765 | 425 | 278 | 7 | 31 | 445 | 2 | 407 | 1.35e-47 | 172 |
Msa0598520 | AT3G05165.5 | 27.765 | 425 | 278 | 7 | 31 | 445 | 2 | 407 | 1.35e-47 | 172 |
Msa0598520 | AT4G16480.2 | 31.714 | 350 | 216 | 6 | 54 | 390 | 26 | 365 | 1.58e-47 | 174 |
Msa0598520 | AT4G16480.2 | 36.066 | 122 | 70 | 1 | 401 | 514 | 459 | 580 | 2.17e-17 | 85.9 |
Msa0598520 | AT4G16480.3 | 31.714 | 350 | 216 | 6 | 54 | 390 | 26 | 365 | 1.58e-47 | 174 |
Msa0598520 | AT4G16480.3 | 36.066 | 122 | 70 | 1 | 401 | 514 | 459 | 580 | 2.17e-17 | 85.9 |
Msa0598520 | AT4G16480.1 | 31.714 | 350 | 216 | 6 | 54 | 390 | 26 | 365 | 1.58e-47 | 174 |
Msa0598520 | AT4G16480.1 | 36.066 | 122 | 70 | 1 | 401 | 514 | 459 | 580 | 2.17e-17 | 85.9 |
Msa0598520 | AT2G35740.1 | 31.378 | 341 | 213 | 6 | 54 | 382 | 25 | 356 | 2.04e-47 | 174 |
Msa0598520 | AT2G35740.1 | 39.806 | 103 | 62 | 0 | 401 | 503 | 458 | 560 | 1.59e-17 | 86.3 |
Msa0598520 | AT1G54730.5 | 28.132 | 423 | 257 | 9 | 83 | 499 | 60 | 441 | 2.32e-47 | 171 |
Msa0598520 | AT3G05400.1 | 28.178 | 472 | 300 | 12 | 45 | 504 | 17 | 461 | 2.79e-47 | 171 |
Msa0598520 | AT4G02050.2 | 25.407 | 492 | 327 | 9 | 41 | 505 | 13 | 491 | 4.80e-47 | 171 |
Msa0598520 | AT4G02050.1 | 25.407 | 492 | 327 | 9 | 41 | 505 | 13 | 491 | 4.80e-47 | 171 |
Msa0598520 | AT1G67300.1 | 29.331 | 508 | 314 | 14 | 15 | 500 | 3 | 487 | 5.31e-47 | 171 |
Msa0598520 | AT1G67300.3 | 29.331 | 508 | 314 | 14 | 15 | 500 | 3 | 487 | 5.31e-47 | 171 |
Msa0598520 | AT1G67300.2 | 29.273 | 509 | 314 | 14 | 15 | 500 | 3 | 488 | 2.00e-46 | 169 |
Msa0598520 | AT1G08920.2 | 28.059 | 474 | 300 | 11 | 45 | 499 | 18 | 469 | 2.56e-46 | 169 |
Msa0598520 | AT1G54730.3 | 29.474 | 380 | 243 | 8 | 83 | 456 | 60 | 420 | 2.82e-46 | 167 |
Msa0598520 | AT3G19930.1 | 26.477 | 491 | 316 | 10 | 51 | 511 | 20 | 495 | 4.40e-45 | 166 |
Msa0598520 | AT3G19930.2 | 26.477 | 491 | 316 | 10 | 51 | 511 | 20 | 495 | 4.40e-45 | 166 |
Msa0598520 | AT1G34580.1 | 27.126 | 494 | 309 | 13 | 51 | 509 | 21 | 498 | 4.96e-45 | 166 |
Msa0598520 | AT5G23270.1 | 25.451 | 499 | 324 | 11 | 46 | 511 | 15 | 498 | 1.04e-44 | 165 |
Msa0598520 | AT1G05030.2 | 28.482 | 481 | 318 | 10 | 22 | 500 | 7 | 463 | 3.24e-44 | 163 |
Msa0598520 | AT1G11260.1 | 25.000 | 500 | 330 | 12 | 54 | 517 | 22 | 512 | 3.53e-44 | 164 |
Msa0598520 | AT5G17010.2 | 27.033 | 492 | 247 | 11 | 40 | 499 | 25 | 436 | 6.57e-44 | 161 |
Msa0598520 | AT1G07340.1 | 27.389 | 471 | 303 | 10 | 55 | 498 | 23 | 481 | 8.47e-44 | 162 |
Msa0598520 | AT1G34580.2 | 27.830 | 424 | 277 | 9 | 101 | 509 | 39 | 448 | 1.39e-43 | 161 |
Msa0598520 | AT5G27360.4 | 27.488 | 422 | 279 | 10 | 27 | 438 | 1 | 405 | 6.83e-43 | 158 |
Msa0598520 | AT1G67300.4 | 29.464 | 448 | 271 | 15 | 15 | 440 | 3 | 427 | 5.65e-42 | 156 |
Msa0598520 | AT1G67300.5 | 29.464 | 448 | 271 | 15 | 15 | 440 | 3 | 427 | 5.65e-42 | 156 |
Msa0598520 | AT1G67300.6 | 29.241 | 448 | 272 | 14 | 15 | 440 | 3 | 427 | 8.97e-42 | 155 |
Msa0598520 | AT1G67300.7 | 29.241 | 448 | 272 | 14 | 15 | 440 | 3 | 427 | 8.97e-42 | 155 |
Msa0598520 | AT3G05400.2 | 27.119 | 472 | 285 | 13 | 45 | 504 | 17 | 441 | 1.60e-41 | 155 |
Msa0598520 | AT4G21480.1 | 26.446 | 484 | 309 | 13 | 54 | 505 | 22 | 490 | 1.86e-41 | 156 |
Msa0598520 | AT1G79820.2 | 29.274 | 468 | 296 | 12 | 45 | 500 | 44 | 488 | 2.53e-41 | 155 |
Msa0598520 | AT1G79820.1 | 29.274 | 468 | 296 | 12 | 45 | 500 | 44 | 488 | 2.53e-41 | 155 |
Msa0598520 | AT3G20460.1 | 25.917 | 436 | 297 | 8 | 70 | 499 | 68 | 483 | 1.50e-40 | 153 |
Msa0598520 | AT1G54730.9 | 29.261 | 352 | 224 | 8 | 83 | 428 | 60 | 392 | 1.89e-40 | 151 |
Msa0598520 | AT1G54730.7 | 29.261 | 352 | 224 | 8 | 83 | 428 | 60 | 392 | 1.89e-40 | 151 |
Msa0598520 | AT1G08920.3 | 26.824 | 425 | 276 | 9 | 45 | 456 | 18 | 420 | 9.15e-38 | 144 |
Msa0598520 | AT1G50310.2 | 27.666 | 347 | 235 | 9 | 166 | 505 | 13 | 350 | 1.12e-37 | 143 |
Msa0598520 | AT1G08900.4 | 28.042 | 378 | 251 | 7 | 83 | 456 | 53 | 413 | 3.28e-37 | 143 |
Msa0598520 | AT1G54730.4 | 26.842 | 380 | 232 | 8 | 83 | 456 | 60 | 399 | 6.42e-37 | 141 |
Msa0598520 | AT5G61520.1 | 25.673 | 483 | 317 | 10 | 54 | 505 | 23 | 494 | 1.35e-36 | 142 |
Msa0598520 | AT1G79820.4 | 28.814 | 413 | 265 | 10 | 45 | 448 | 44 | 436 | 2.86e-36 | 140 |
Msa0598520 | AT2G48020.4 | 28.291 | 357 | 228 | 8 | 54 | 404 | 33 | 367 | 3.14e-36 | 139 |
Msa0598520 | AT2G48020.3 | 28.267 | 329 | 214 | 6 | 54 | 382 | 33 | 339 | 2.60e-35 | 135 |
Msa0598520 | AT3G05155.2 | 28.955 | 335 | 204 | 7 | 45 | 372 | 18 | 325 | 3.54e-35 | 135 |
Msa0598520 | AT1G77210.3 | 27.224 | 371 | 229 | 14 | 167 | 520 | 9 | 355 | 4.03e-35 | 135 |
Msa0598520 | AT3G51490.1 | 36.864 | 236 | 144 | 5 | 53 | 285 | 2 | 235 | 8.52e-35 | 139 |
Msa0598520 | AT3G51490.1 | 29.004 | 231 | 139 | 5 | 284 | 502 | 495 | 712 | 1.23e-17 | 87.0 |
Msa0598520 | AT3G51490.2 | 36.864 | 236 | 144 | 5 | 53 | 285 | 2 | 235 | 8.83e-35 | 139 |
Msa0598520 | AT3G51490.2 | 32.035 | 231 | 140 | 5 | 284 | 502 | 495 | 720 | 2.70e-20 | 95.1 |
Msa0598520 | AT1G54730.11 | 28.947 | 304 | 196 | 6 | 69 | 372 | 50 | 333 | 2.12e-34 | 133 |
Msa0598520 | AT5G61520.2 | 26.098 | 410 | 288 | 6 | 101 | 505 | 47 | 446 | 9.86e-34 | 134 |
Msa0598520 | AT1G54730.8 | 26.420 | 352 | 213 | 8 | 83 | 428 | 60 | 371 | 4.04e-31 | 125 |
Msa0598520 | AT1G20840.2 | 36.449 | 214 | 124 | 5 | 59 | 266 | 8 | 215 | 7.55e-31 | 127 |
Msa0598520 | AT1G20840.2 | 32.751 | 229 | 135 | 5 | 287 | 502 | 497 | 719 | 5.76e-22 | 100 |
Msa0598520 | AT1G20840.1 | 36.449 | 214 | 124 | 5 | 59 | 266 | 8 | 215 | 7.55e-31 | 127 |
Msa0598520 | AT1G20840.1 | 32.751 | 229 | 135 | 5 | 287 | 502 | 497 | 719 | 5.76e-22 | 100 |
Msa0598520 | AT1G54730.10 | 27.757 | 263 | 178 | 3 | 83 | 345 | 60 | 310 | 3.23e-30 | 121 |
Msa0598520 | AT1G54730.6 | 27.757 | 263 | 178 | 3 | 83 | 345 | 60 | 310 | 3.23e-30 | 121 |
Msa0598520 | AT3G51490.3 | 39.080 | 174 | 103 | 3 | 113 | 285 | 14 | 185 | 7.33e-27 | 115 |
Msa0598520 | AT3G51490.3 | 32.035 | 231 | 140 | 5 | 284 | 502 | 445 | 670 | 2.91e-20 | 95.1 |
Msa0598520 | AT4G35300.9 | 38.308 | 201 | 116 | 6 | 66 | 260 | 15 | 213 | 1.33e-26 | 114 |
Msa0598520 | AT4G35300.9 | 32.751 | 229 | 133 | 6 | 288 | 502 | 495 | 716 | 3.38e-24 | 107 |
Msa0598520 | AT4G35300.2 | 38.308 | 201 | 116 | 6 | 66 | 260 | 15 | 213 | 1.33e-26 | 114 |
Msa0598520 | AT4G35300.2 | 32.751 | 229 | 133 | 6 | 288 | 502 | 495 | 716 | 3.38e-24 | 107 |
Msa0598520 | AT4G35300.3 | 38.308 | 201 | 116 | 6 | 66 | 260 | 15 | 213 | 1.33e-26 | 114 |
Msa0598520 | AT4G35300.3 | 32.751 | 229 | 133 | 6 | 288 | 502 | 495 | 716 | 3.38e-24 | 107 |
Msa0598520 | AT4G35300.4 | 38.308 | 201 | 116 | 6 | 66 | 260 | 15 | 213 | 1.46e-26 | 114 |
Msa0598520 | AT4G35300.4 | 32.751 | 229 | 133 | 6 | 288 | 502 | 505 | 726 | 3.34e-24 | 107 |
Msa0598520 | AT4G35300.8 | 38.308 | 201 | 116 | 6 | 66 | 260 | 15 | 213 | 1.46e-26 | 114 |
Msa0598520 | AT4G35300.8 | 32.751 | 229 | 133 | 6 | 288 | 502 | 505 | 726 | 3.34e-24 | 107 |
Msa0598520 | AT4G35300.6 | 38.308 | 201 | 116 | 6 | 66 | 260 | 15 | 213 | 1.46e-26 | 114 |
Msa0598520 | AT4G35300.6 | 32.751 | 229 | 133 | 6 | 288 | 502 | 505 | 726 | 3.34e-24 | 107 |
Msa0598520 | AT4G35300.11 | 38.308 | 201 | 116 | 6 | 66 | 260 | 15 | 213 | 1.46e-26 | 114 |
Msa0598520 | AT4G35300.11 | 32.751 | 229 | 133 | 6 | 288 | 502 | 505 | 726 | 3.34e-24 | 107 |
Msa0598520 | AT4G35300.1 | 38.308 | 201 | 116 | 6 | 66 | 260 | 15 | 213 | 1.46e-26 | 114 |
Msa0598520 | AT4G35300.1 | 32.751 | 229 | 133 | 6 | 288 | 502 | 505 | 726 | 3.34e-24 | 107 |
Msa0598520 | AT4G35300.10 | 38.308 | 201 | 116 | 6 | 66 | 260 | 15 | 213 | 1.46e-26 | 114 |
Msa0598520 | AT4G35300.10 | 32.751 | 229 | 133 | 6 | 288 | 502 | 505 | 726 | 3.34e-24 | 107 |
Msa0598520 | AT4G35300.7 | 38.308 | 201 | 116 | 6 | 66 | 260 | 15 | 213 | 1.46e-26 | 114 |
Msa0598520 | AT4G35300.7 | 32.751 | 229 | 133 | 6 | 288 | 502 | 505 | 726 | 3.34e-24 | 107 |
Msa0598520 | AT1G79820.3 | 26.068 | 468 | 263 | 13 | 45 | 500 | 44 | 440 | 9.39e-26 | 110 |
Msa0598520 | AT4G35300.5 | 32.751 | 229 | 133 | 6 | 288 | 502 | 308 | 529 | 1.50e-24 | 107 |
Msa0598520 | AT5G43350.1 | 23.077 | 468 | 279 | 15 | 104 | 509 | 76 | 524 | 1.91e-13 | 73.2 |
Msa0598520 | AT2G38940.1 | 21.896 | 443 | 290 | 11 | 105 | 499 | 81 | 515 | 1.93e-12 | 70.1 |
Msa0598520 | AT5G43340.1 | 22.936 | 436 | 292 | 14 | 105 | 505 | 82 | 508 | 5.29e-12 | 68.6 |
Msa0598520 | AT3G54700.2 | 22.991 | 448 | 293 | 13 | 105 | 509 | 81 | 519 | 9.04e-12 | 68.2 |
Msa0598520 | AT3G54700.1 | 22.991 | 448 | 293 | 13 | 105 | 509 | 81 | 519 | 9.04e-12 | 68.2 |
Msa0598520 | AT1G16370.1 | 25.792 | 442 | 263 | 20 | 91 | 510 | 116 | 514 | 1.41e-11 | 67.4 |
Msa0598520 | AT1G79820.5 | 37.748 | 151 | 80 | 5 | 357 | 500 | 235 | 378 | 5.23e-11 | 65.1 |
Find 147 sgRNAs with CRISPR-Local
Find 187 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ACATGGTCCTTTGAGATATT+TGG | 0.082116 | 4_2:+35018736 | Msa0598520:three_prime_UTR |
CCAGCGGCCATTAAAATTTC+TGG | 0.104258 | 4_2:-35017822 | None:intergenic |
ACTCTTTCATTATTTGAAAA+AGG | 0.131055 | 4_2:+35018008 | Msa0598520:CDS |
TTGGACTCGGCCCTGTTTGC+TGG | 0.157878 | 4_2:+35018090 | Msa0598520:CDS |
AACAAAGACCGTCTTTATTT+TGG | 0.178346 | 4_2:+35017893 | Msa0598520:CDS |
TGTATCTCTATTGGGTAGTT+TGG | 0.222757 | 4_2:+35017155 | Msa0598520:CDS |
CGAGAATTTGATATCTGATA+TGG | 0.240675 | 4_2:+35018563 | Msa0598520:three_prime_UTR |
AAGGCCGGAAAACGCGTAAT+TGG | 0.248896 | 4_2:-35017445 | None:intergenic |
TCTCTCAACAATGTTCTTCT+TGG | 0.260513 | 4_2:+35016801 | Msa0598520:CDS |
ATTTCATGTAAGTCAATAAT+AGG | 0.272933 | 4_2:+35018669 | Msa0598520:three_prime_UTR |
GCTGGAATTGGAATAGGTTT+TGG | 0.278916 | 4_2:+35017309 | Msa0598520:CDS |
TTTGAGTATTGTATCTCTAT+TGG | 0.289099 | 4_2:+35017146 | Msa0598520:CDS |
CAGATATTATTGGTAGAAAA+TGG | 0.294464 | 4_2:+35017193 | Msa0598520:CDS |
TCTTATCTTCCAATTGTTGT+TGG | 0.306828 | 4_2:-35016734 | None:intergenic |
AAGATGATGTTCCAAGAAAA+TGG | 0.307041 | 4_2:+35016612 | Msa0598520:exon |
GACTGCTTGTTTGTTCTGTA+TGG | 0.317788 | 4_2:+35017980 | Msa0598520:CDS |
CTTCGCCGGATGCTGATTAC+TGG | 0.318031 | 4_2:+35017741 | Msa0598520:CDS |
GTATCTCTATTGGGTAGTTT+GGG | 0.319309 | 4_2:+35017156 | Msa0598520:CDS |
CTTCTCATTACTAGCACAAT+TGG | 0.327974 | 4_2:+35017954 | Msa0598520:CDS |
GTACTTGTTCTTTGTTCCTA+AGG | 0.334633 | 4_2:-35016664 | None:intergenic |
GGAAGATTGTTAGCTGGAAT+TGG | 0.335016 | 4_2:+35017297 | Msa0598520:CDS |
CCGATCTTGCTTCGTCAATT+CGG | 0.337686 | 4_2:-35017581 | None:intergenic |
AATGGGGAAATGGGTTTATC+AGG | 0.344962 | 4_2:+35016636 | Msa0598520:CDS |
TTGAGTATTGTATCTCTATT+GGG | 0.346213 | 4_2:+35017147 | Msa0598520:CDS |
TTGTTAGCTGGAATTGGAAT+AGG | 0.355045 | 4_2:+35017303 | Msa0598520:CDS |
AGAAAATGGTAATGGGGAAA+TGG | 0.358662 | 4_2:+35016626 | Msa0598520:CDS |
CAACTTGTGCAGAACAAAAC+TGG | 0.362425 | 4_2:+35018404 | Msa0598520:CDS |
TCATTGTAATTCCACCCATT+TGG | 0.368460 | 4_2:-35017242 | None:intergenic |
TCTAAAGATAACTGAGGTTC+AGG | 0.370786 | 4_2:+35017104 | Msa0598520:CDS |
GTCCTCGTATTTACCAGAAT+TGG | 0.372355 | 4_2:-35017679 | None:intergenic |
TACTTTATCAATAAGAATAA+TGG | 0.372573 | 4_2:-35017919 | None:intergenic |
CTCCGCCACCGGCGCTTCGC+CGG | 0.383124 | 4_2:+35017727 | Msa0598520:CDS |
GTATCCAACGCAATTTCTTT+CGG | 0.383566 | 4_2:+35018221 | Msa0598520:CDS |
TGAGAATGAACATGGGAGTC+AGG | 0.384972 | 4_2:+35018352 | Msa0598520:CDS |
TGTTCCAAGAAAATGGTAAT+GGG | 0.389476 | 4_2:+35016619 | Msa0598520:CDS |
GGGCCATTAGTGATTGCATT+AGG | 0.390751 | 4_2:+35018029 | Msa0598520:CDS |
AATCCATCAGGGTCGTATAA+AGG | 0.392415 | 4_2:-35018454 | None:intergenic |
CACTCGGAGCTGTAGCGAAT+AGG | 0.400992 | 4_2:+35018162 | Msa0598520:CDS |
TGGACTCGGCCCTGTTTGCT+GGG | 0.402706 | 4_2:+35018091 | Msa0598520:CDS |
GATGTCAAAACCCAGCAAAC+AGG | 0.402833 | 4_2:-35018101 | None:intergenic |
ATCATTAGTACTTGATATGA+AGG | 0.422297 | 4_2:-35017273 | None:intergenic |
GAAAATGGTAATGGGGAAAT+GGG | 0.424079 | 4_2:+35016627 | Msa0598520:CDS |
ATACCTAATGCAATCACTAA+TGG | 0.428309 | 4_2:-35018032 | None:intergenic |
GATATCTCAGCAATATATAT+AGG | 0.430921 | 4_2:-35017345 | None:intergenic |
GGAAGAACATCAGATATTAT+TGG | 0.433859 | 4_2:+35017183 | Msa0598520:CDS |
TACTTGTTCTTTGTTCCTAA+GGG | 0.434909 | 4_2:-35016663 | None:intergenic |
AACAATGTTCTTCTTGGCTA+TGG | 0.435667 | 4_2:+35016807 | Msa0598520:CDS |
ACTGCTTGTTTGTTCTGTAT+GGG | 0.446903 | 4_2:+35017981 | Msa0598520:CDS |
ACACTAGTACCTGAAACAAA+AGG | 0.446951 | 4_2:+35018299 | Msa0598520:CDS |
GGCTGCAGTTGTATTCCAAA+TGG | 0.451381 | 4_2:+35017227 | Msa0598520:CDS |
CGGATGCTGATTACTGGTCT+TGG | 0.455359 | 4_2:+35017747 | Msa0598520:CDS |
GCCTGAGCACGCACTCGTAA+AGG | 0.455930 | 4_2:-35018134 | None:intergenic |
GCCTTTCGGTACACATAAGT+TGG | 0.456022 | 4_2:+35017463 | Msa0598520:CDS |
CTGGAATGACAAAATCCATC+AGG | 0.456148 | 4_2:-35018466 | None:intergenic |
AACAACAATTGGAAGATAAG+AGG | 0.456265 | 4_2:+35016736 | Msa0598520:CDS |
AGTGAGCCTCTAGTGAGATT+TGG | 0.456475 | 4_2:-35017369 | None:intergenic |
ACATGACTTGGCAACAATAG+AGG | 0.460226 | 4_2:-35016405 | None:intergenic |
ACTCGGAGCTGTAGCGAATA+GGG | 0.461405 | 4_2:+35018163 | Msa0598520:CDS |
CCCTTTACGAGTGCGTGCTC+AGG | 0.461504 | 4_2:+35018133 | Msa0598520:CDS |
TTCTCATTACTAGCACAATT+GGG | 0.462959 | 4_2:+35017955 | Msa0598520:CDS |
CGTGCTCAGGCATCTGCACT+CGG | 0.465823 | 4_2:+35018146 | Msa0598520:CDS |
TCATATCAAGTACTAATGAT+TGG | 0.466636 | 4_2:+35017276 | Msa0598520:CDS |
CCGAATTGACGAAGCAAGAT+CGG | 0.470119 | 4_2:+35017581 | Msa0598520:CDS |
ATGTTCCAAGAAAATGGTAA+TGG | 0.470800 | 4_2:+35016618 | Msa0598520:CDS |
AAGATAAGAGGAACAGTACT+AGG | 0.471084 | 4_2:+35016748 | Msa0598520:CDS |
ATTATTCTTATTGATAAAGT+AGG | 0.477981 | 4_2:+35017921 | Msa0598520:CDS |
ATCCGGCGAAGCGCCGGTGG+CGG | 0.482961 | 4_2:-35017729 | None:intergenic |
CCTGAGCACGCACTCGTAAA+GGG | 0.483401 | 4_2:-35018133 | None:intergenic |
AATTGAAATATATGTAGCTC+TGG | 0.483498 | 4_2:-35018485 | None:intergenic |
GGTTTATCAGGAATTCCCTT+AGG | 0.485952 | 4_2:+35016648 | Msa0598520:CDS |
CTATTGGGTAGTTTGGGTGG+TGG | 0.488972 | 4_2:+35017162 | Msa0598520:CDS |
GAGGCTAGCAGAAATACAAC+AGG | 0.497842 | 4_2:+35017644 | Msa0598520:CDS |
CATATGAATTACATCCCTCA+TGG | 0.499141 | 4_2:-35018799 | None:intergenic |
ATCAGCATCCGGCGAAGCGC+CGG | 0.504116 | 4_2:-35017735 | None:intergenic |
TCAAAGGACCATGTGGAGAC+AGG | 0.506999 | 4_2:-35018727 | None:intergenic |
GAGAATTTGATATCTGATAT+GGG | 0.507816 | 4_2:+35018564 | Msa0598520:three_prime_UTR |
CACTAGTACCTGAAACAAAA+GGG | 0.508537 | 4_2:+35018300 | Msa0598520:CDS |
CAAACCTTTGTGTCTGAACA+AGG | 0.513720 | 4_2:-35016548 | None:intergenic |
ACTCACATGGATATGATCTT+CGG | 0.514882 | 4_2:+35018535 | Msa0598520:three_prime_UTR |
ATGAGAAAGAAGTGGAAGAG+AGG | 0.523249 | 4_2:+35017625 | Msa0598520:CDS |
CAAGACCAGTAATCAGCATC+CGG | 0.526849 | 4_2:-35017746 | None:intergenic |
ATGATTGGAAGATTGTTAGC+TGG | 0.528824 | 4_2:+35017291 | Msa0598520:CDS |
ACTTATGTGTACCGAAAGGC+CGG | 0.528846 | 4_2:-35017460 | None:intergenic |
ATAAATGTAGGAATTATGCT+TGG | 0.533082 | 4_2:+35017414 | Msa0598520:CDS |
CCAACGCAATTTCTTTCGGC+GGG | 0.535097 | 4_2:+35018225 | Msa0598520:CDS |
GACGGTCTTTGTTATACCTA+CGG | 0.535206 | 4_2:-35017883 | None:intergenic |
CAGGGAAAAGAGATGGAGCT+AGG | 0.539460 | 4_2:+35018371 | Msa0598520:CDS |
CGCGGCTTTAATCACTCACA+TGG | 0.541974 | 4_2:+35018522 | Msa0598520:three_prime_UTR |
TGAATTGCTCTCTCCGCCAC+CGG | 0.543633 | 4_2:+35017716 | Msa0598520:CDS |
GCTGCAGTTGTATTCCAAAT+GGG | 0.552850 | 4_2:+35017228 | Msa0598520:CDS |
AGCATCCGGCGAAGCGCCGG+TGG | 0.553482 | 4_2:-35017732 | None:intergenic |
ACCAACCATCTCGGCGACTC+AGG | 0.557547 | 4_2:-35017549 | None:intergenic |
TCTCTATTGGGTAGTTTGGG+TGG | 0.559075 | 4_2:+35017159 | Msa0598520:CDS |
GCAGAAATACAACAGGCTGC+TGG | 0.560147 | 4_2:+35017651 | Msa0598520:CDS |
AAACGAAGATGAGAAAGAAG+TGG | 0.563366 | 4_2:+35017617 | Msa0598520:CDS |
TGAAATTAAAGAACATGACT+TGG | 0.563646 | 4_2:-35016417 | None:intergenic |
CAATTGTGCTAGTAATGAGA+AGG | 0.568147 | 4_2:-35017953 | None:intergenic |
TCATTAGTACTTGATATGAA+GGG | 0.569168 | 4_2:-35017272 | None:intergenic |
ACACCTTTATACGACCCTGA+TGG | 0.569736 | 4_2:+35018451 | Msa0598520:three_prime_UTR |
TCCTGAGTCGCCGAGATGGT+TGG | 0.572336 | 4_2:+35017548 | Msa0598520:CDS |
TGGGAGTCAGGGAAAAGAGA+TGG | 0.575169 | 4_2:+35018364 | Msa0598520:CDS |
GTTGTTTCCAAATATCTCAA+AGG | 0.577067 | 4_2:-35018743 | None:intergenic |
GAGAATGAACATGGGAGTCA+GGG | 0.577348 | 4_2:+35018353 | Msa0598520:CDS |
TGGAGAGTAATGCTTGCTGT+TGG | 0.577364 | 4_2:+35017483 | Msa0598520:CDS |
GAACAAAGAACAAGTACAAG+AGG | 0.581349 | 4_2:+35016670 | Msa0598520:CDS |
CATGACTTGGCAACAATAGA+GGG | 0.582567 | 4_2:-35016404 | None:intergenic |
ATGTCAAAACCCAGCAAACA+GGG | 0.587235 | 4_2:-35018100 | None:intergenic |
TTCTGCATTACCAACCATCT+CGG | 0.587579 | 4_2:-35017558 | None:intergenic |
AAATTGCGTTGGATACAGAC+AGG | 0.590532 | 4_2:-35018214 | None:intergenic |
TAGAAAATGGACAATGGCAT+TGG | 0.591364 | 4_2:+35017206 | Msa0598520:CDS |
ACAGGAAAGACATGGCTACA+AGG | 0.594862 | 4_2:-35018196 | None:intergenic |
ATAATAGGATTGTATATGAA+CGG | 0.595528 | 4_2:+35018684 | Msa0598520:three_prime_UTR |
ACAACCTTGTTCAGACACAA+AGG | 0.595654 | 4_2:+35016544 | Msa0598520:five_prime_UTR |
AATTGTGCTAGTAATGAGAA+GGG | 0.597166 | 4_2:-35017952 | None:intergenic |
GCAGATGTGGGTGTGATGAG+TGG | 0.598876 | 4_2:+35017057 | Msa0598520:intron |
TTATTCCTGAGTCGCCGAGA+TGG | 0.599472 | 4_2:+35017544 | Msa0598520:CDS |
CCCGCCGAAAGAAATTGCGT+TGG | 0.604005 | 4_2:-35018225 | None:intergenic |
CAATGGTTTAGAACTACAGA+AGG | 0.607868 | 4_2:-35016357 | None:intergenic |
GAGATGATCCTGTCTCCACA+TGG | 0.609706 | 4_2:+35018719 | Msa0598520:three_prime_UTR |
ATGATGTTTGAGAATGAACA+TGG | 0.614564 | 4_2:+35018344 | Msa0598520:CDS |
TCCAACGCAATTTCTTTCGG+CGG | 0.616866 | 4_2:+35018224 | Msa0598520:CDS |
CATTACAGTGTACTCCATGA+GGG | 0.620975 | 4_2:+35018785 | Msa0598520:three_prime_UTR |
CATTAGTACTTGATATGAAG+GGG | 0.622524 | 4_2:-35017271 | None:intergenic |
GCAAAACCAATGAACACTGA+AGG | 0.623428 | 4_2:-35017513 | None:intergenic |
TGATTTATCTTCAATTCCAG+CGG | 0.623893 | 4_2:-35017838 | None:intergenic |
GTTCCAAGAAAATGGTAATG+GGG | 0.628643 | 4_2:+35016620 | Msa0598520:CDS |
AATGGCCACCAAAATAAAGA+CGG | 0.634627 | 4_2:-35017901 | None:intergenic |
GCAGTTGTATTCCAAATGGG+TGG | 0.636411 | 4_2:+35017231 | Msa0598520:CDS |
TGCCAATTCTGGTAAATACG+AGG | 0.640126 | 4_2:+35017677 | Msa0598520:CDS |
ATATCACCAAATCTCACTAG+AGG | 0.642480 | 4_2:+35017363 | Msa0598520:CDS |
AGAGAGCAATTCACACCACA+CGG | 0.646009 | 4_2:-35017706 | None:intergenic |
CTAGCTGCTACTGTTGCCGT+AGG | 0.648188 | 4_2:+35017867 | Msa0598520:CDS |
TATTGGTAGAAAATGGACAA+TGG | 0.649056 | 4_2:+35017200 | Msa0598520:CDS |
ATCAGGGTCGTATAAAGGTG+TGG | 0.650273 | 4_2:-35018449 | None:intergenic |
TAGTGTGAAAACAAAGACAA+TGG | 0.657278 | 4_2:-35018282 | None:intergenic |
AAATATCTCAAAGGACCATG+TGG | 0.659478 | 4_2:-35018734 | None:intergenic |
TCATTACAGTGTACTCCATG+AGG | 0.660152 | 4_2:+35018784 | Msa0598520:three_prime_UTR |
GAGAGCAATTCACACCACAC+GGG | 0.662513 | 4_2:-35017705 | None:intergenic |
TGGAATGACAAAATCCATCA+GGG | 0.662835 | 4_2:-35018465 | None:intergenic |
CATGTGAGTGATTAAAGCCG+CGG | 0.666934 | 4_2:-35018521 | None:intergenic |
ATTGTGCTAGTAATGAGAAG+GGG | 0.672038 | 4_2:-35017951 | None:intergenic |
TCCAACTTATGTGTACCGAA+AGG | 0.681195 | 4_2:-35017464 | None:intergenic |
GTAGCGAATAGGGTTTGCAG+CGG | 0.685373 | 4_2:+35018173 | Msa0598520:CDS |
AGAAGATCTAAAGATAACTG+AGG | 0.686492 | 4_2:+35017098 | Msa0598520:CDS |
GGATACAGACAGGAAAGACA+TGG | 0.687845 | 4_2:-35018204 | None:intergenic |
TGATGTTTGAGAATGAACAT+GGG | 0.695121 | 4_2:+35018345 | Msa0598520:CDS |
AATACGAGGACAAACCCGTG+TGG | 0.756945 | 4_2:+35017691 | Msa0598520:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAAAAATAATAGTCAAGT+TGG | + | chr4_2:35016327-35016346 | Msa0598520:five_prime_UTR | 15.0% |
!! | AAAAAAATAATAGTCAAGTT+GGG | + | chr4_2:35016328-35016347 | Msa0598520:five_prime_UTR | 15.0% |
!!! | TTTTATTGAGATGATTTTTA+CGG | + | chr4_2:35017012-35017031 | Msa0598520:intron | 15.0% |
!! | TACTTTATCAATAAGAATAA+TGG | - | chr4_2:35017922-35017941 | None:intergenic | 15.0% |
!! | ATTATTCTTATTGATAAAGT+AGG | + | chr4_2:35017921-35017940 | Msa0598520:CDS | 15.0% |
!!! | TGTGTATGTGTTATTAATTA+TGG | + | chr4_2:35016986-35017005 | Msa0598520:intron | 20.0% |
!!! | GTGTATGTGTTATTAATTAT+GGG | + | chr4_2:35016987-35017006 | Msa0598520:intron | 20.0% |
!!! | TTTATTGAGATGATTTTTAC+GGG | + | chr4_2:35017013-35017032 | Msa0598520:intron | 20.0% |
!! | ACTCTTTCATTATTTGAAAA+AGG | + | chr4_2:35018008-35018027 | Msa0598520:CDS | 20.0% |
!! | CTCTTTCATTATTTGAAAAA+GGG | + | chr4_2:35018009-35018028 | Msa0598520:CDS | 20.0% |
!! | ATTTCATGTAAGTCAATAAT+AGG | + | chr4_2:35018669-35018688 | Msa0598520:three_prime_UTR | 20.0% |
!! | ATAATAGGATTGTATATGAA+CGG | + | chr4_2:35018684-35018703 | Msa0598520:three_prime_UTR | 20.0% |
! | TGAAATTAAAGAACATGACT+TGG | - | chr4_2:35016420-35016439 | None:intergenic | 25.0% |
!!! | TGTTTATTTTTGTGTTTGGT+TGG | - | chr4_2:35016527-35016546 | None:intergenic | 25.0% |
!!! | AGGTTGTTTATTTTTGTGTT+TGG | - | chr4_2:35016531-35016550 | None:intergenic | 25.0% |
!! | TTTGAGTATTGTATCTCTAT+TGG | + | chr4_2:35017146-35017165 | Msa0598520:CDS | 25.0% |
!! | TTGAGTATTGTATCTCTATT+GGG | + | chr4_2:35017147-35017166 | Msa0598520:CDS | 25.0% |
! | CAGATATTATTGGTAGAAAA+TGG | + | chr4_2:35017193-35017212 | Msa0598520:CDS | 25.0% |
! | TCATTAGTACTTGATATGAA+GGG | - | chr4_2:35017275-35017294 | None:intergenic | 25.0% |
! | ATCATTAGTACTTGATATGA+AGG | - | chr4_2:35017276-35017295 | None:intergenic | 25.0% |
! | TCATATCAAGTACTAATGAT+TGG | + | chr4_2:35017276-35017295 | Msa0598520:CDS | 25.0% |
! | GATATCTCAGCAATATATAT+AGG | - | chr4_2:35017348-35017367 | None:intergenic | 25.0% |
! | CCTACATTTATAAAAATCTC+TGG | - | chr4_2:35017405-35017424 | None:intergenic | 25.0% |
!! | CCAGAGATTTTTATAAATGT+AGG | + | chr4_2:35017402-35017421 | Msa0598520:CDS | 25.0% |
! | ATAAATGTAGGAATTATGCT+TGG | + | chr4_2:35017414-35017433 | Msa0598520:CDS | 25.0% |
!! | TTACAGTCCAGAAATTTTAA+TGG | + | chr4_2:35017815-35017834 | Msa0598520:CDS | 25.0% |
!!! | TGGAAATGTAGCATTTTTTT+CGG | + | chr4_2:35018067-35018086 | Msa0598520:CDS | 25.0% |
! | AATTGAAATATATGTAGCTC+TGG | - | chr4_2:35018488-35018507 | None:intergenic | 25.0% |
! | GAGAATTTGATATCTGATAT+GGG | + | chr4_2:35018564-35018583 | Msa0598520:three_prime_UTR | 25.0% |
! | AATCCAACATTCCATGTTTT+TGG | + | chr4_2:35016475-35016494 | Msa0598520:five_prime_UTR | 30.0% |
ATCTTAGACTACCAAAAACA+TGG | - | chr4_2:35016489-35016508 | None:intergenic | 30.0% | |
AAGATGATGTTCCAAGAAAA+TGG | + | chr4_2:35016612-35016631 | Msa0598520:exon | 30.0% | |
ATGTTCCAAGAAAATGGTAA+TGG | + | chr4_2:35016618-35016637 | Msa0598520:CDS | 30.0% | |
TGTTCCAAGAAAATGGTAAT+GGG | + | chr4_2:35016619-35016638 | Msa0598520:CDS | 30.0% | |
TACTTGTTCTTTGTTCCTAA+GGG | - | chr4_2:35016666-35016685 | None:intergenic | 30.0% | |
TCTTATCTTCCAATTGTTGT+TGG | - | chr4_2:35016737-35016756 | None:intergenic | 30.0% | |
AACAACAATTGGAAGATAAG+AGG | + | chr4_2:35016736-35016755 | Msa0598520:CDS | 30.0% | |
! | TTTGTGAATTTTTGCAGATG+TGG | + | chr4_2:35017044-35017063 | Msa0598520:intron | 30.0% |
! | TTGTGAATTTTTGCAGATGT+GGG | + | chr4_2:35017045-35017064 | Msa0598520:intron | 30.0% |
AGAAGATCTAAAGATAACTG+AGG | + | chr4_2:35017098-35017117 | Msa0598520:CDS | 30.0% | |
!! | GTTCAGGTAGAAATTTTGAT+TGG | + | chr4_2:35017120-35017139 | Msa0598520:CDS | 30.0% |
GGAAGAACATCAGATATTAT+TGG | + | chr4_2:35017183-35017202 | Msa0598520:CDS | 30.0% | |
TATTGGTAGAAAATGGACAA+TGG | + | chr4_2:35017200-35017219 | Msa0598520:CDS | 30.0% | |
CATTAGTACTTGATATGAAG+GGG | - | chr4_2:35017274-35017293 | None:intergenic | 30.0% | |
TGATTTATCTTCAATTCCAG+CGG | - | chr4_2:35017841-35017860 | None:intergenic | 30.0% | |
!! | AACAAAGACCGTCTTTATTT+TGG | + | chr4_2:35017893-35017912 | Msa0598520:CDS | 30.0% |
AATTGTGCTAGTAATGAGAA+GGG | - | chr4_2:35017955-35017974 | None:intergenic | 30.0% | |
TTCTCATTACTAGCACAATT+GGG | + | chr4_2:35017955-35017974 | Msa0598520:CDS | 30.0% | |
ATACCTAATGCAATCACTAA+TGG | - | chr4_2:35018035-35018054 | None:intergenic | 30.0% | |
! | TTAGGTATTCTTTTTGTCTG+TGG | + | chr4_2:35018047-35018066 | Msa0598520:CDS | 30.0% |
!!! | AATGTAGCATTTTTTTCGGT+TGG | + | chr4_2:35018071-35018090 | Msa0598520:CDS | 30.0% |
TAGTGTGAAAACAAAGACAA+TGG | - | chr4_2:35018285-35018304 | None:intergenic | 30.0% | |
ATGATGTTTGAGAATGAACA+TGG | + | chr4_2:35018344-35018363 | Msa0598520:CDS | 30.0% | |
TGATGTTTGAGAATGAACAT+GGG | + | chr4_2:35018345-35018364 | Msa0598520:CDS | 30.0% | |
CGAGAATTTGATATCTGATA+TGG | + | chr4_2:35018563-35018582 | Msa0598520:three_prime_UTR | 30.0% | |
! | TGTATATGAACGGAGATTTT+TGG | + | chr4_2:35018694-35018713 | Msa0598520:three_prime_UTR | 30.0% |
! | GTTGTTTCCAAATATCTCAA+AGG | - | chr4_2:35018746-35018765 | None:intergenic | 30.0% |
! | CAATGGTTTAGAACTACAGA+AGG | - | chr4_2:35016360-35016379 | None:intergenic | 35.0% |
CTACCAAAAACATGGAATGT+TGG | - | chr4_2:35016481-35016500 | None:intergenic | 35.0% | |
! | GTTCCAAGAAAATGGTAATG+GGG | + | chr4_2:35016620-35016639 | Msa0598520:CDS | 35.0% |
! | TTTCCCCATTACCATTTTCT+TGG | - | chr4_2:35016626-35016645 | None:intergenic | 35.0% |
!! | AGAAAATGGTAATGGGGAAA+TGG | + | chr4_2:35016626-35016645 | Msa0598520:CDS | 35.0% |
!! | GAAAATGGTAATGGGGAAAT+GGG | + | chr4_2:35016627-35016646 | Msa0598520:CDS | 35.0% |
GTACTTGTTCTTTGTTCCTA+AGG | - | chr4_2:35016667-35016686 | None:intergenic | 35.0% | |
GAACAAAGAACAAGTACAAG+AGG | + | chr4_2:35016670-35016689 | Msa0598520:CDS | 35.0% | |
! | TGTTTTGCACCAACAACAAT+TGG | + | chr4_2:35016725-35016744 | Msa0598520:CDS | 35.0% |
AAGATAAGAGGAACAGTACT+AGG | + | chr4_2:35016748-35016767 | Msa0598520:CDS | 35.0% | |
TCTCTCAACAATGTTCTTCT+TGG | + | chr4_2:35016801-35016820 | Msa0598520:CDS | 35.0% | |
AACAATGTTCTTCTTGGCTA+TGG | + | chr4_2:35016807-35016826 | Msa0598520:CDS | 35.0% | |
TCTAAAGATAACTGAGGTTC+AGG | + | chr4_2:35017104-35017123 | Msa0598520:CDS | 35.0% | |
TGTATCTCTATTGGGTAGTT+TGG | + | chr4_2:35017155-35017174 | Msa0598520:CDS | 35.0% | |
GTATCTCTATTGGGTAGTTT+GGG | + | chr4_2:35017156-35017175 | Msa0598520:CDS | 35.0% | |
TAGAAAATGGACAATGGCAT+TGG | + | chr4_2:35017206-35017225 | Msa0598520:CDS | 35.0% | |
TCATTGTAATTCCACCCATT+TGG | - | chr4_2:35017245-35017264 | None:intergenic | 35.0% | |
ATGATTGGAAGATTGTTAGC+TGG | + | chr4_2:35017291-35017310 | Msa0598520:CDS | 35.0% | |
TTGTTAGCTGGAATTGGAAT+AGG | + | chr4_2:35017303-35017322 | Msa0598520:CDS | 35.0% | |
ATATCACCAAATCTCACTAG+AGG | + | chr4_2:35017363-35017382 | Msa0598520:CDS | 35.0% | |
! | ATTTTGCCTTCAGTGTTCAT+TGG | + | chr4_2:35017507-35017526 | Msa0598520:CDS | 35.0% |
AAACGAAGATGAGAAAGAAG+TGG | + | chr4_2:35017617-35017636 | Msa0598520:CDS | 35.0% | |
! | CAGTGTTTTCAACAAATCTC+TGG | + | chr4_2:35017774-35017793 | Msa0598520:CDS | 35.0% |
!!! | AAAGACCGTCTTTATTTTGG+TGG | + | chr4_2:35017896-35017915 | Msa0598520:CDS | 35.0% |
AATGGCCACCAAAATAAAGA+CGG | - | chr4_2:35017904-35017923 | None:intergenic | 35.0% | |
ATTGTGCTAGTAATGAGAAG+GGG | - | chr4_2:35017954-35017973 | None:intergenic | 35.0% | |
CAATTGTGCTAGTAATGAGA+AGG | - | chr4_2:35017956-35017975 | None:intergenic | 35.0% | |
CTTCTCATTACTAGCACAAT+TGG | + | chr4_2:35017954-35017973 | Msa0598520:CDS | 35.0% | |
ACTGCTTGTTTGTTCTGTAT+GGG | + | chr4_2:35017981-35018000 | Msa0598520:CDS | 35.0% | |
GTATCCAACGCAATTTCTTT+CGG | + | chr4_2:35018221-35018240 | Msa0598520:CDS | 35.0% | |
ACACTAGTACCTGAAACAAA+AGG | + | chr4_2:35018299-35018318 | Msa0598520:CDS | 35.0% | |
CACTAGTACCTGAAACAAAA+GGG | + | chr4_2:35018300-35018319 | Msa0598520:CDS | 35.0% | |
!! | AATGACTTCCCTTTTGTTTC+AGG | - | chr4_2:35018311-35018330 | None:intergenic | 35.0% |
TGGAATGACAAAATCCATCA+GGG | - | chr4_2:35018468-35018487 | None:intergenic | 35.0% | |
!!! | AATTTCTCTTGTTTTGTCCG+CGG | + | chr4_2:35018504-35018523 | Msa0598520:three_prime_UTR | 35.0% |
ACTCACATGGATATGATCTT+CGG | + | chr4_2:35018535-35018554 | Msa0598520:three_prime_UTR | 35.0% | |
TGGGACATGAGAAAAAACAA+AGG | + | chr4_2:35018583-35018602 | Msa0598520:three_prime_UTR | 35.0% | |
!! | ATATGAACGGAGATTTTTGG+TGG | + | chr4_2:35018697-35018716 | Msa0598520:three_prime_UTR | 35.0% |
AAATATCTCAAAGGACCATG+TGG | - | chr4_2:35018737-35018756 | None:intergenic | 35.0% | |
!! | ACATGGTCCTTTGAGATATT+TGG | + | chr4_2:35018736-35018755 | Msa0598520:three_prime_UTR | 35.0% |
CATATGAATTACATCCCTCA+TGG | - | chr4_2:35018802-35018821 | None:intergenic | 35.0% | |
! | TCTTTTTGTCACGCAAGCAA+TGG | - | chr4_2:35016377-35016396 | None:intergenic | 40.0% |
ATTGCTTGCGTGACAAAAAG+AGG | + | chr4_2:35016376-35016395 | Msa0598520:five_prime_UTR | 40.0% | |
TTGCTTGCGTGACAAAAAGA+GGG | + | chr4_2:35016377-35016396 | Msa0598520:five_prime_UTR | 40.0% | |
! | CATGACTTGGCAACAATAGA+GGG | - | chr4_2:35016407-35016426 | None:intergenic | 40.0% |
! | ACATGACTTGGCAACAATAG+AGG | - | chr4_2:35016408-35016427 | None:intergenic | 40.0% |
ACAACCTTGTTCAGACACAA+AGG | + | chr4_2:35016544-35016563 | Msa0598520:five_prime_UTR | 40.0% | |
CAAACCTTTGTGTCTGAACA+AGG | - | chr4_2:35016551-35016570 | None:intergenic | 40.0% | |
! | AATGGGGAAATGGGTTTATC+AGG | + | chr4_2:35016636-35016655 | Msa0598520:CDS | 40.0% |
GGTTTATCAGGAATTCCCTT+AGG | + | chr4_2:35016648-35016667 | Msa0598520:CDS | 40.0% | |
GCTGCAGTTGTATTCCAAAT+GGG | + | chr4_2:35017228-35017247 | Msa0598520:CDS | 40.0% | |
GGAAGATTGTTAGCTGGAAT+TGG | + | chr4_2:35017297-35017316 | Msa0598520:CDS | 40.0% | |
! | GCTGGAATTGGAATAGGTTT+TGG | + | chr4_2:35017309-35017328 | Msa0598520:CDS | 40.0% |
! | GTATCCAATTACGCGTTTTC+CGG | + | chr4_2:35017441-35017460 | Msa0598520:CDS | 40.0% |
TCCAACTTATGTGTACCGAA+AGG | - | chr4_2:35017467-35017486 | None:intergenic | 40.0% | |
GCAAAACCAATGAACACTGA+AGG | - | chr4_2:35017516-35017535 | None:intergenic | 40.0% | |
TTCTGCATTACCAACCATCT+CGG | - | chr4_2:35017561-35017580 | None:intergenic | 40.0% | |
ATGAGAAAGAAGTGGAAGAG+AGG | + | chr4_2:35017625-35017644 | Msa0598520:CDS | 40.0% | |
TGCCAATTCTGGTAAATACG+AGG | + | chr4_2:35017677-35017696 | Msa0598520:CDS | 40.0% | |
GTCCTCGTATTTACCAGAAT+TGG | - | chr4_2:35017682-35017701 | None:intergenic | 40.0% | |
! | GACGGTCTTTGTTATACCTA+CGG | - | chr4_2:35017886-35017905 | None:intergenic | 40.0% |
GACTGCTTGTTTGTTCTGTA+TGG | + | chr4_2:35017980-35017999 | Msa0598520:CDS | 40.0% | |
!!! | GCATTTTTTTCGGTTGGACT+CGG | + | chr4_2:35018077-35018096 | Msa0598520:CDS | 40.0% |
ATGTCAAAACCCAGCAAACA+GGG | - | chr4_2:35018103-35018122 | None:intergenic | 40.0% | |
AAATTGCGTTGGATACAGAC+AGG | - | chr4_2:35018217-35018236 | None:intergenic | 40.0% | |
CAACTTGTGCAGAACAAAAC+TGG | + | chr4_2:35018404-35018423 | Msa0598520:CDS | 40.0% | |
AATCCATCAGGGTCGTATAA+AGG | - | chr4_2:35018457-35018476 | None:intergenic | 40.0% | |
CTGGAATGACAAAATCCATC+AGG | - | chr4_2:35018469-35018488 | None:intergenic | 40.0% | |
TCATTACAGTGTACTCCATG+AGG | + | chr4_2:35018784-35018803 | Msa0598520:three_prime_UTR | 40.0% | |
CATTACAGTGTACTCCATGA+GGG | + | chr4_2:35018785-35018804 | Msa0598520:three_prime_UTR | 40.0% | |
TTGCGTGACAAAAAGAGGGT+TGG | + | chr4_2:35016381-35016400 | Msa0598520:five_prime_UTR | 45.0% | |
TCTCTATTGGGTAGTTTGGG+TGG | + | chr4_2:35017159-35017178 | Msa0598520:CDS | 45.0% | |
GGCTGCAGTTGTATTCCAAA+TGG | + | chr4_2:35017227-35017246 | Msa0598520:CDS | 45.0% | |
GCAGTTGTATTCCAAATGGG+TGG | + | chr4_2:35017231-35017250 | Msa0598520:CDS | 45.0% | |
AGTGAGCCTCTAGTGAGATT+TGG | - | chr4_2:35017372-35017391 | None:intergenic | 45.0% | |
ACTTATGTGTACCGAAAGGC+CGG | - | chr4_2:35017463-35017482 | None:intergenic | 45.0% | |
GCCTTTCGGTACACATAAGT+TGG | + | chr4_2:35017463-35017482 | Msa0598520:CDS | 45.0% | |
!! | TGGAGAGTAATGCTTGCTGT+TGG | + | chr4_2:35017483-35017502 | Msa0598520:CDS | 45.0% |
CCGATCTTGCTTCGTCAATT+CGG | - | chr4_2:35017584-35017603 | None:intergenic | 45.0% | |
CCGAATTGACGAAGCAAGAT+CGG | + | chr4_2:35017581-35017600 | Msa0598520:CDS | 45.0% | |
GAGGCTAGCAGAAATACAAC+AGG | + | chr4_2:35017644-35017663 | Msa0598520:CDS | 45.0% | |
AGAGAGCAATTCACACCACA+CGG | - | chr4_2:35017709-35017728 | None:intergenic | 45.0% | |
CAAGACCAGTAATCAGCATC+CGG | - | chr4_2:35017749-35017768 | None:intergenic | 45.0% | |
CCAGCGGCCATTAAAATTTC+TGG | - | chr4_2:35017825-35017844 | None:intergenic | 45.0% | |
!! | CCAGAAATTTTAATGGCCGC+TGG | + | chr4_2:35017822-35017841 | Msa0598520:CDS | 45.0% |
GGGCCATTAGTGATTGCATT+AGG | + | chr4_2:35018029-35018048 | Msa0598520:CDS | 45.0% | |
GATGTCAAAACCCAGCAAAC+AGG | - | chr4_2:35018104-35018123 | None:intergenic | 45.0% | |
ACAGGAAAGACATGGCTACA+AGG | - | chr4_2:35018199-35018218 | None:intergenic | 45.0% | |
GGATACAGACAGGAAAGACA+TGG | - | chr4_2:35018207-35018226 | None:intergenic | 45.0% | |
TCCAACGCAATTTCTTTCGG+CGG | + | chr4_2:35018224-35018243 | Msa0598520:CDS | 45.0% | |
TGAGAATGAACATGGGAGTC+AGG | + | chr4_2:35018352-35018371 | Msa0598520:CDS | 45.0% | |
GAGAATGAACATGGGAGTCA+GGG | + | chr4_2:35018353-35018372 | Msa0598520:CDS | 45.0% | |
ATCAGGGTCGTATAAAGGTG+TGG | - | chr4_2:35018452-35018471 | None:intergenic | 45.0% | |
ACACCTTTATACGACCCTGA+TGG | + | chr4_2:35018451-35018470 | Msa0598520:three_prime_UTR | 45.0% | |
CATGTGAGTGATTAAAGCCG+CGG | - | chr4_2:35018524-35018543 | None:intergenic | 45.0% | |
CTATTGGGTAGTTTGGGTGG+TGG | + | chr4_2:35017162-35017181 | Msa0598520:CDS | 50.0% | |
AAGGCCGGAAAACGCGTAAT+TGG | - | chr4_2:35017448-35017467 | None:intergenic | 50.0% | |
! | TTACGCGTTTTCCGGCCTTT+CGG | + | chr4_2:35017449-35017468 | Msa0598520:CDS | 50.0% |
TTATTCCTGAGTCGCCGAGA+TGG | + | chr4_2:35017544-35017563 | Msa0598520:CDS | 50.0% | |
GCAGAAATACAACAGGCTGC+TGG | + | chr4_2:35017651-35017670 | Msa0598520:CDS | 50.0% | |
!!! | GCTGCTGGTTTTGCCAATTC+TGG | + | chr4_2:35017666-35017685 | Msa0598520:CDS | 50.0% |
AATACGAGGACAAACCCGTG+TGG | + | chr4_2:35017691-35017710 | Msa0598520:CDS | 50.0% | |
GAGAGCAATTCACACCACAC+GGG | - | chr4_2:35017708-35017727 | None:intergenic | 50.0% | |
! | CGGATGCTGATTACTGGTCT+TGG | + | chr4_2:35017747-35017766 | Msa0598520:CDS | 50.0% |
ACTCGGAGCTGTAGCGAATA+GGG | + | chr4_2:35018163-35018182 | Msa0598520:CDS | 50.0% | |
GTAGCGAATAGGGTTTGCAG+CGG | + | chr4_2:35018173-35018192 | Msa0598520:CDS | 50.0% | |
CCAACGCAATTTCTTTCGGC+GGG | + | chr4_2:35018225-35018244 | Msa0598520:CDS | 50.0% | |
TGGGAGTCAGGGAAAAGAGA+TGG | + | chr4_2:35018364-35018383 | Msa0598520:CDS | 50.0% | |
CAGGGAAAAGAGATGGAGCT+AGG | + | chr4_2:35018371-35018390 | Msa0598520:CDS | 50.0% | |
! | CGCGGCTTTAATCACTCACA+TGG | + | chr4_2:35018522-35018541 | Msa0598520:three_prime_UTR | 50.0% |
GAGATGATCCTGTCTCCACA+TGG | + | chr4_2:35018719-35018738 | Msa0598520:three_prime_UTR | 50.0% | |
TCAAAGGACCATGTGGAGAC+AGG | - | chr4_2:35018730-35018749 | None:intergenic | 50.0% | |
GCAGATGTGGGTGTGATGAG+TGG | + | chr4_2:35017057-35017076 | Msa0598520:intron | 55.0% | |
TGAATTGCTCTCTCCGCCAC+CGG | + | chr4_2:35017716-35017735 | Msa0598520:CDS | 55.0% | |
! | CTTCGCCGGATGCTGATTAC+TGG | + | chr4_2:35017741-35017760 | Msa0598520:CDS | 55.0% |
CTAGCTGCTACTGTTGCCGT+AGG | + | chr4_2:35017867-35017886 | Msa0598520:CDS | 55.0% | |
CCTGAGCACGCACTCGTAAA+GGG | - | chr4_2:35018136-35018155 | None:intergenic | 55.0% | |
CACTCGGAGCTGTAGCGAAT+AGG | + | chr4_2:35018162-35018181 | Msa0598520:CDS | 55.0% | |
CCCGCCGAAAGAAATTGCGT+TGG | - | chr4_2:35018228-35018247 | None:intergenic | 55.0% | |
TCCTGAGTCGCCGAGATGGT+TGG | + | chr4_2:35017548-35017567 | Msa0598520:CDS | 60.0% | |
ACCAACCATCTCGGCGACTC+AGG | - | chr4_2:35017552-35017571 | None:intergenic | 60.0% | |
TTGGACTCGGCCCTGTTTGC+TGG | + | chr4_2:35018090-35018109 | Msa0598520:CDS | 60.0% | |
TGGACTCGGCCCTGTTTGCT+GGG | + | chr4_2:35018091-35018110 | Msa0598520:CDS | 60.0% | |
CCCTTTACGAGTGCGTGCTC+AGG | + | chr4_2:35018133-35018152 | Msa0598520:CDS | 60.0% | |
GCCTGAGCACGCACTCGTAA+AGG | - | chr4_2:35018137-35018156 | None:intergenic | 60.0% | |
CGTGCTCAGGCATCTGCACT+CGG | + | chr4_2:35018146-35018165 | Msa0598520:CDS | 60.0% | |
ATCAGCATCCGGCGAAGCGC+CGG | - | chr4_2:35017738-35017757 | None:intergenic | 65.0% | |
!! | ATCCGGCGAAGCGCCGGTGG+CGG | - | chr4_2:35017732-35017751 | None:intergenic | 75.0% |
!! | AGCATCCGGCGAAGCGCCGG+TGG | - | chr4_2:35017735-35017754 | None:intergenic | 75.0% |
! | CTCCGCCACCGGCGCTTCGC+CGG | + | chr4_2:35017727-35017746 | Msa0598520:CDS | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4_2 | gene | 35016319 | 35018862 | 35016319 | ID=Msa0598520;Name=Msa0598520 |
chr4_2 | mRNA | 35016319 | 35018862 | 35016319 | ID=Msa0598520-mRNA-1;Parent=Msa0598520;Name=Msa0598520-mRNA-1;_AED=0.00;_eAED=0.00;_QI=296|1|1|1|1|1|2|423|530 |
chr4_2 | exon | 35016319 | 35016828 | 35016319 | ID=Msa0598520-mRNA-1:exon:8109;Parent=Msa0598520-mRNA-1 |
chr4_2 | exon | 35017061 | 35018862 | 35017061 | ID=Msa0598520-mRNA-1:exon:8110;Parent=Msa0598520-mRNA-1 |
chr4_2 | five_prime_UTR | 35016319 | 35016614 | 35016319 | ID=Msa0598520-mRNA-1:five_prime_utr;Parent=Msa0598520-mRNA-1 |
chr4_2 | CDS | 35016615 | 35016828 | 35016615 | ID=Msa0598520-mRNA-1:cds;Parent=Msa0598520-mRNA-1 |
chr4_2 | CDS | 35017061 | 35018439 | 35017061 | ID=Msa0598520-mRNA-1:cds;Parent=Msa0598520-mRNA-1 |
chr4_2 | three_prime_UTR | 35018440 | 35018862 | 35018440 | ID=Msa0598520-mRNA-1:three_prime_utr;Parent=Msa0598520-mRNA-1 |
Gene Sequence |
Protein sequence |