Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0603740 | XP_013456184.1 | 86.364 | 660 | 27 | 6 | 1 | 616 | 1 | 641 | 0.0 | 1085 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0603740 | sp|Q3M929|DER_TRIV2 | 45.714 | 490 | 195 | 10 | 142 | 600 | 3 | 452 | 2.76e-136 | 408 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0028900 | Msa0603740 | 0.873179 | 1.796708e-67 | -8.615850e-47 |
| Msa0069070 | Msa0603740 | 0.809803 | 1.579277e-50 | -8.615850e-47 |
| Msa0088670 | Msa0603740 | 0.831983 | 1.224708e-55 | -8.615850e-47 |
| Msa0603740 | Msa0622450 | 0.804774 | 1.838071e-49 | -8.615850e-47 |
| Msa0603740 | Msa0655150 | 0.805850 | 1.094034e-49 | -8.615850e-47 |
| Msa0603740 | Msa0667680 | 0.801536 | 8.596915e-49 | -8.615850e-47 |
| Msa0603740 | Msa0669160 | 0.803727 | 3.035857e-49 | -8.615850e-47 |
| Msa0603740 | Msa0695800 | 0.810146 | 1.332770e-50 | -8.615850e-47 |
| Msa0603740 | Msa0706790 | 0.802627 | 5.129346e-49 | -8.615850e-47 |
| Msa0603740 | Msa0706860 | 0.803050 | 4.194350e-49 | -8.615850e-47 |
| Msa0603740 | Msa0733240 | 0.803821 | 2.903549e-49 | -8.615850e-47 |
| Msa0603740 | Msa0749160 | 0.839933 | 1.178171e-57 | -8.615850e-47 |
| Msa0603740 | Msa0793590 | 0.825459 | 4.634473e-54 | -8.615850e-47 |
| Msa0603740 | Msa0795850 | 0.802076 | 6.659066e-49 | -8.615850e-47 |
| Msa0603740 | Msa0803220 | 0.807369 | 5.228885e-50 | -8.615850e-47 |
| Msa0603740 | Msa0803930 | 0.807977 | 3.883288e-50 | -8.615850e-47 |
| Msa0603740 | Msa0838100 | 0.810579 | 1.074627e-50 | -8.615850e-47 |
| Msa0603740 | Msa0848670 | 0.801460 | 8.909020e-49 | -8.615850e-47 |
| Msa0603740 | Msa0849290 | 0.801222 | 9.971259e-49 | -8.615850e-47 |
| Msa0603740 | Msa0901660 | 0.821260 | 4.437094e-53 | -8.615850e-47 |
| Msa0603740 | Msa0927190 | 0.830375 | 3.042875e-55 | -8.615850e-47 |
| Msa0603740 | Msa0967540 | 0.820919 | 5.317707e-53 | -8.615850e-47 |
| Msa0603740 | Msa0999480 | 0.809575 | 1.768331e-50 | -8.615850e-47 |
| Msa0603740 | Msa1068010 | 0.802590 | 5.219095e-49 | -8.615850e-47 |
| Msa0603740 | Msa1111850 | 0.803387 | 3.571103e-49 | -8.615850e-47 |
| Msa0603740 | Msa1185030 | 0.830358 | 3.071714e-55 | -8.615850e-47 |
| Msa0603740 | Msa1203320 | 0.802804 | 4.714246e-49 | -8.615850e-47 |
| Msa0603740 | Msa1239000 | 0.815678 | 8.175881e-52 | -8.615850e-47 |
| Msa0603740 | Msa1291070 | 0.801472 | 8.861501e-49 | -8.615850e-47 |
| Msa0603740 | Msa1293040 | 0.828743 | 7.587752e-55 | -8.615850e-47 |
| Msa0603740 | Msa1350130 | 0.817026 | 4.081754e-52 | -8.615850e-47 |
| Msa0603740 | Msa1353040 | 0.808952 | 2.405347e-50 | -8.615850e-47 |
| Msa0135070 | Msa0603740 | 0.813763 | 2.171174e-51 | -8.615850e-47 |
| Msa0180540 | Msa0603740 | 0.825824 | 3.797648e-54 | -8.615850e-47 |
| Msa0208710 | Msa0603740 | 0.800627 | 1.319058e-48 | -8.615850e-47 |
| Msa0369100 | Msa0603740 | 0.841266 | 5.272889e-58 | -8.615850e-47 |
| Msa0378530 | Msa0603740 | 0.800858 | 1.182970e-48 | -8.615850e-47 |
| Msa0386230 | Msa0603740 | 0.810462 | 1.139091e-50 | -8.615850e-47 |
| Msa0386520 | Msa0603740 | 0.810797 | 9.640994e-51 | -8.615850e-47 |
| Msa0462240 | Msa0603740 | 0.814141 | 1.792195e-51 | -8.615850e-47 |
| Msa0463150 | Msa0603740 | 0.818675 | 1.732190e-52 | -8.615850e-47 |
| Msa0347600 | Msa0603740 | 0.813914 | 2.010825e-51 | -8.615850e-47 |
| Msa0504310 | Msa0603740 | 0.808026 | 3.790936e-50 | -8.615850e-47 |
| Msa0538140 | Msa0603740 | 0.801760 | 7.734646e-49 | -8.615850e-47 |
| Msa0544710 | Msa0603740 | 0.804535 | 2.062071e-49 | -8.615850e-47 |
| Msa0561760 | Msa0603740 | 0.809191 | 2.137617e-50 | -8.615850e-47 |
| Msa0565530 | Msa0603740 | 0.813670 | 2.275448e-51 | -8.615850e-47 |
| Msa0580360 | Msa0603740 | 0.819024 | 1.443272e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0603740 | MtrunA17_Chr4g0032431 | 86.364 | 660 | 27 | 6 | 1 | 616 | 1 | 641 | 0.0 | 1085 |
| Msa0603740 | MtrunA17_Chr4g0076761 | 28.489 | 523 | 274 | 12 | 142 | 601 | 37 | 522 | 2.83e-48 | 177 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0603740 | AT3G12080.1 | 70.280 | 535 | 113 | 3 | 107 | 595 | 108 | 642 | 0.0 | 753 |
| Msa0603740 | AT3G12080.2 | 69.311 | 479 | 101 | 3 | 107 | 539 | 108 | 586 | 0.0 | 655 |
| Msa0603740 | AT5G39960.1 | 29.804 | 510 | 262 | 13 | 137 | 585 | 112 | 586 | 4.56e-47 | 175 |
Find 178 sgRNAs with CRISPR-Local
Find 545 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAAACTTACCGGCGCTTTA+TGG | 0.166917 | 4_2:+48396669 | Msa0603740:CDS |
| CGGGGAAGAGAGATGAATTT+TGG | 0.194670 | 4_2:-48390064 | None:intergenic |
| TACTAACCTTGGTTAATTTC+AGG | 0.230463 | 4_2:-48397094 | None:intergenic |
| CTTCTTGACCTTGTTTGTTC+GGG | 0.230960 | 4_2:+48393325 | Msa0603740:CDS |
| TTATGCAGGTGTCTGAATTT+TGG | 0.252199 | 4_2:+48392028 | Msa0603740:CDS |
| GCCTCTTCTATATGATAAAA+TGG | 0.270489 | 4_2:-48397000 | None:intergenic |
| CGTTCAAATGCGGGATTTCT+TGG | 0.275436 | 4_2:+48396703 | Msa0603740:CDS |
| ATTCCAATATCAGCTATATC+AGG | 0.278422 | 4_2:+48393286 | Msa0603740:CDS |
| GTTTATATGGCCGATCATAT+TGG | 0.285141 | 4_2:+48391291 | Msa0603740:CDS |
| TTTATATGGCCGATCATATT+GGG | 0.292903 | 4_2:+48391292 | Msa0603740:CDS |
| TTCGTCACACCGTCGAAAAT+TGG | 0.298056 | 4_2:+48396954 | Msa0603740:CDS |
| ATTCACCGGCACTGAACTTC+GGG | 0.309980 | 4_2:-48390111 | None:intergenic |
| TCTTCTTGACCTTGTTTGTT+CGG | 0.316702 | 4_2:+48393324 | Msa0603740:CDS |
| GTTACGAGGGACCGTTTATA+TGG | 0.321880 | 4_2:+48391278 | Msa0603740:CDS |
| TACAGTGATTGTGATCCTTT+TGG | 0.329930 | 4_2:+48397171 | Msa0603740:three_prime_UTR |
| ATAAAGCGCCGGTAAGTTTC+AGG | 0.332302 | 4_2:-48396667 | None:intergenic |
| AAAATCACAAACTACTGTTA+TGG | 0.340708 | 4_2:+48391364 | Msa0603740:CDS |
| GATATAGCTGATATTGGAAT+TGG | 0.341403 | 4_2:-48393283 | None:intergenic |
| AATTTATCTTTAGAAGTAGT+TGG | 0.348000 | 4_2:+48397261 | Msa0603740:three_prime_UTR |
| AATATTATCATCCAAACTTC+TGG | 0.354669 | 4_2:-48397142 | None:intergenic |
| GTCCCTGATATAGCTGATAT+TGG | 0.355168 | 4_2:-48393289 | None:intergenic |
| ACAAGCTTCGCTTACTTGAT+TGG | 0.358845 | 4_2:+48395045 | Msa0603740:CDS |
| CGATGACTTACCAGAGGAAT+TGG | 0.361814 | 4_2:+48390156 | Msa0603740:CDS |
| GCGGGAGAGGCGGCGACAGC+GGG | 0.365763 | 4_2:-48390083 | None:intergenic |
| GGTGTAGTGAAATGAGAAAA+TGG | 0.369299 | 4_2:-48390002 | None:intergenic |
| CATTATTTAATCGTCTCGTT+GGG | 0.374320 | 4_2:+48391080 | Msa0603740:CDS |
| GGCTGTGGTTCTGTTTGTAT+CGG | 0.378439 | 4_2:+48397024 | Msa0603740:three_prime_UTR |
| GTTCCAGCAATTTCAATTGT+TGG | 0.384187 | 4_2:+48393641 | Msa0603740:CDS |
| GATAAATTTACTAGTTATTG+AGG | 0.384798 | 4_2:-48397246 | None:intergenic |
| CTACCAACAATTGAAATTGC+TGG | 0.387235 | 4_2:-48393644 | None:intergenic |
| TGCTCTTGTCATTGAGGCCA+TGG | 0.390813 | 4_2:+48394722 | Msa0603740:CDS |
| CCACCTCGTGTCCTGGGAGG+AGG | 0.391395 | 4_2:-48396426 | None:intergenic |
| CTGCGCCACAAAAGCCGAAT+GGG | 0.392579 | 4_2:-48396730 | None:intergenic |
| TTCCATCTTATTGATACTGC+TGG | 0.393997 | 4_2:+48394603 | Msa0603740:CDS |
| GCTATATCAGGGACTGGAAC+TGG | 0.396661 | 4_2:+48393298 | Msa0603740:CDS |
| CAAGCTTCGCTTACTTGATT+GGG | 0.404312 | 4_2:+48395046 | Msa0603740:CDS |
| ACGAACGAGTGCCAGAAGTT+TGG | 0.405734 | 4_2:+48397131 | Msa0603740:three_prime_UTR |
| ATCCTTGGTAGAAGATTGTC+AGG | 0.406509 | 4_2:-48391022 | None:intergenic |
| AACTACTGTTATGGAAGATC+TGG | 0.412261 | 4_2:+48391373 | Msa0603740:CDS |
| TCTTCTTGCAGGCTGCTATA+AGG | 0.414886 | 4_2:+48396602 | Msa0603740:intron |
| GCATTATTTAATCGTCTCGT+TGG | 0.421033 | 4_2:+48391079 | Msa0603740:CDS |
| GTGTAGTGAAATGAGAAAAT+GGG | 0.430232 | 4_2:-48390001 | None:intergenic |
| ACTGAACTTCGGGGTGGAGC+GGG | 0.431237 | 4_2:-48390101 | None:intergenic |
| ATTTATCTTTAGAAGTAGTT+GGG | 0.431377 | 4_2:+48397262 | Msa0603740:three_prime_UTR |
| TTATTGATACTGCTGGAATC+AGG | 0.432717 | 4_2:+48394610 | Msa0603740:CDS |
| ACTAACCTTGGTTAATTTCA+GGG | 0.433742 | 4_2:-48397093 | None:intergenic |
| TGAGGACTGAGTTGAAGATT+TGG | 0.434099 | 4_2:-48389875 | None:intergenic |
| CTACCAAGGATTGCTATTGT+TGG | 0.442714 | 4_2:+48391034 | Msa0603740:CDS |
| ACTTCGGGGTGGAGCGGGAG+AGG | 0.446604 | 4_2:-48390096 | None:intergenic |
| CGAAGAATTGAAGTGGGAAA+GGG | 0.447746 | 4_2:-48390028 | None:intergenic |
| CTAGAGAGGCAGCTGTTGCC+AGG | 0.449493 | 4_2:+48391438 | Msa0603740:CDS |
| GTTTATTCTACTGCTCTAGC+TGG | 0.453196 | 4_2:+48395077 | Msa0603740:CDS |
| CTCAATCATTGACGGCATCC+TGG | 0.454478 | 4_2:-48391456 | None:intergenic |
| CATGGCTTGTATCACTGAAC+AGG | 0.463425 | 4_2:+48394740 | Msa0603740:CDS |
| AGAAGCAAAGGAAGTTGCGC+TGG | 0.467989 | 4_2:+48390258 | Msa0603740:CDS |
| AGGACAACTGTAGCCTCAGC+TGG | 0.475841 | 4_2:+48394636 | Msa0603740:CDS |
| CTGGCACTCGTTCGTACTTG+TGG | 0.478176 | 4_2:-48397123 | None:intergenic |
| ATCGTGCATTTCGTGCTATT+AGG | 0.481079 | 4_2:+48394685 | Msa0603740:CDS |
| TGTTGTTGCTCTTGTCATTG+AGG | 0.482868 | 4_2:+48394716 | Msa0603740:CDS |
| CACTGAACTTCGGGGTGGAG+CGG | 0.483527 | 4_2:-48390102 | None:intergenic |
| GCTGTGGTTCTGTTTGTATC+GGG | 0.489187 | 4_2:+48397025 | Msa0603740:three_prime_UTR |
| GCAATTGTGGTGGATGAGCC+TGG | 0.491923 | 4_2:+48391254 | Msa0603740:CDS |
| TTGGGGAGATCATGAATTCA+TGG | 0.494938 | 4_2:+48391310 | Msa0603740:CDS |
| GCAAAAGTTTCAGCATCATT+CGG | 0.499431 | 4_2:-48397358 | None:intergenic |
| AATATGATCGGCCATATAAA+CGG | 0.499928 | 4_2:-48391289 | None:intergenic |
| AATGCTGACTTGCCAACGTT+CGG | 0.500836 | 4_2:-48391061 | None:intergenic |
| TTCAGTGCCGGTGAATTCTC+CGG | 0.503194 | 4_2:+48390118 | Msa0603740:CDS |
| AGAGCAGTAGAATAAACTAC+TGG | 0.504818 | 4_2:-48395071 | None:intergenic |
| GCTTGTCTCTCAATCATTGA+CGG | 0.508653 | 4_2:-48391464 | None:intergenic |
| AAGCAGCTGCGTTCAAATGC+GGG | 0.509783 | 4_2:+48396694 | Msa0603740:CDS |
| TTCCAGCAGTATCAATAAGA+TGG | 0.510717 | 4_2:-48394605 | None:intergenic |
| GGTAATTCAACCAATTCCTC+TGG | 0.512078 | 4_2:-48390166 | None:intergenic |
| AATTCACCGGCACTGAACTT+CGG | 0.512991 | 4_2:-48390112 | None:intergenic |
| ATCGTCGTCGATGGTGGTGC+CGG | 0.517760 | 4_2:-48390137 | None:intergenic |
| TGGTAAGTCATCGTCGTCGA+TGG | 0.518476 | 4_2:-48390146 | None:intergenic |
| TTGACAAAGAACACAAATGT+AGG | 0.519280 | 4_2:-48396628 | None:intergenic |
| AGCTGCCTCTCTAGAGGCAA+GGG | 0.519693 | 4_2:-48391429 | None:intergenic |
| CTGATGTGGAGATTGCTGAT+TGG | 0.522257 | 4_2:+48391935 | Msa0603740:CDS |
| AGGGGTGATGTAGTAAGAGA+TGG | 0.524487 | 4_2:-48389966 | None:intergenic |
| ATACTGCTGGAATCAGGAAA+AGG | 0.527410 | 4_2:+48394616 | Msa0603740:CDS |
| TATTAGTACAACCATCGGTA+TGG | 0.528394 | 4_2:+48391397 | Msa0603740:CDS |
| GAAGAATTGAAGTGGGAAAG+GGG | 0.531246 | 4_2:-48390027 | None:intergenic |
| GGGGTGATGTAGTAAGAGAT+GGG | 0.531804 | 4_2:-48389965 | None:intergenic |
| ATATCCAACTTAACCATCTG+AGG | 0.533064 | 4_2:-48397306 | None:intergenic |
| TGCCGCTAGTGAAGTCGAAA+AGG | 0.533764 | 4_2:+48396338 | Msa0603740:CDS |
| GACTGAGTTGAAGATTTGGC+GGG | 0.533789 | 4_2:-48389871 | None:intergenic |
| AGATCATGAATTCATGGTGG+TGG | 0.535411 | 4_2:+48391316 | Msa0603740:CDS |
| AAACGGTCCCTCGTAACTCC+AGG | 0.539185 | 4_2:-48391272 | None:intergenic |
| TCTTCTTCAACAAGATTCTG+TGG | 0.540464 | 4_2:-48393611 | None:intergenic |
| TCCACGGAAAAGAATTATGC+AGG | 0.541274 | 4_2:+48392014 | Msa0603740:CDS |
| TTTATTCTACTGCTCTAGCT+GGG | 0.544938 | 4_2:+48395078 | Msa0603740:CDS |
| GAATTCATGGTGGTGGACAC+TGG | 0.545232 | 4_2:+48391323 | Msa0603740:CDS |
| AGCCCACTAAAATTACCAAA+AGG | 0.545851 | 4_2:-48397186 | None:intergenic |
| AGTGAGCGAAGAATTGAAGT+GGG | 0.547778 | 4_2:-48390034 | None:intergenic |
| TATATTGAATCAAGTAGTGC+GGG | 0.547969 | 4_2:+48396386 | Msa0603740:CDS |
| AACATCAACATCATCGTCAT+CGG | 0.550656 | 4_2:-48390221 | None:intergenic |
| CTTCCAACAATAGCAATCCT+TGG | 0.551635 | 4_2:-48391037 | None:intergenic |
| GCGAAGAATTGAAGTGGGAA+AGG | 0.551825 | 4_2:-48390029 | None:intergenic |
| CAGCTGCCTCTCTAGAGGCA+AGG | 0.553340 | 4_2:-48391430 | None:intergenic |
| GTTTGTATCGGGAAAAGTGA+TGG | 0.553679 | 4_2:+48397036 | Msa0603740:three_prime_UTR |
| TTTCACTTTGACTTCACCAA+TGG | 0.555200 | 4_2:+48389913 | Msa0603740:exon |
| AAGTGAGCGAAGAATTGAAG+TGG | 0.555810 | 4_2:-48390035 | None:intergenic |
| CTCTGTTGTACTTCCAGCTG+AGG | 0.557066 | 4_2:-48394649 | None:intergenic |
| ATATCAGCTATATCAGGGAC+TGG | 0.557388 | 4_2:+48393292 | Msa0603740:CDS |
| TCGGGGTGGAGCGGGAGAGG+CGG | 0.557704 | 4_2:-48390093 | None:intergenic |
| ATTGTTGGTAGACCAAATGT+TGG | 0.558878 | 4_2:+48393656 | Msa0603740:CDS |
| GGACTGAGTTGAAGATTTGG+CGG | 0.560164 | 4_2:-48389872 | None:intergenic |
| AGCGGGAGAGGCGGCGACAG+CGG | 0.561172 | 4_2:-48390084 | None:intergenic |
| GAGACAAGCGATTGCAGCTG+TGG | 0.563565 | 4_2:+48391478 | Msa0603740:CDS |
| AATTGAAGTGGGAAAGGGGA+GGG | 0.563937 | 4_2:-48390023 | None:intergenic |
| CATATAGAAGAGGCTGGCTG+TGG | 0.564503 | 4_2:+48397009 | Msa0603740:three_prime_UTR |
| CGGGAGAGGCGGCGACAGCG+GGG | 0.564599 | 4_2:-48390082 | None:intergenic |
| TAAGTCATCGTCGTCGATGG+TGG | 0.564756 | 4_2:-48390143 | None:intergenic |
| TTCTTGACCTTGTTTGTTCG+GGG | 0.568021 | 4_2:+48393326 | Msa0603740:CDS |
| AAGGAGAGATCAAGAAGACT+TGG | 0.568230 | 4_2:+48396357 | Msa0603740:CDS |
| GTAGGGAAACAAGGCAATTG+TGG | 0.571734 | 4_2:+48391241 | Msa0603740:intron |
| GCTGCGCCACAAAAGCCGAA+TGG | 0.572990 | 4_2:-48396731 | None:intergenic |
| CAATTACCTGACCATCAACC+AGG | 0.573204 | 4_2:-48391523 | None:intergenic |
| AGGTCTAACAGCAGCTGATG+TGG | 0.573463 | 4_2:+48391921 | Msa0603740:CDS |
| TCCACCCCGAAGTTCAGTGC+CGG | 0.578130 | 4_2:+48390106 | Msa0603740:CDS |
| TGCGCTCGAGCGAGAAGCAA+AGG | 0.578688 | 4_2:+48390246 | Msa0603740:CDS |
| TTGAGTAGTCCCTGAAAAGA+CGG | 0.584944 | 4_2:-48397059 | None:intergenic |
| TATCCAACTTAACCATCTGA+GGG | 0.586983 | 4_2:-48397305 | None:intergenic |
| TGTAGTGAAATGAGAAAATG+GGG | 0.587990 | 4_2:-48390000 | None:intergenic |
| CATGATCTCCCCAATATGAT+CGG | 0.588215 | 4_2:-48391301 | None:intergenic |
| GGTGGTGCCGGAGAATTCAC+CGG | 0.589501 | 4_2:-48390125 | None:intergenic |
| TTCCAATATCAGCTATATCA+GGG | 0.592136 | 4_2:+48393287 | Msa0603740:CDS |
| GCTGCTTCTCCATAAAGCGC+CGG | 0.593937 | 4_2:-48396678 | None:intergenic |
| TTCGGGGTTACAGAAAGTTG+AGG | 0.594089 | 4_2:+48393342 | Msa0603740:CDS |
| AGTACAACCATCGGTATGGA+TGG | 0.602800 | 4_2:+48391401 | Msa0603740:CDS |
| TCAACCAGGAAAATGATAGC+AGG | 0.605895 | 4_2:-48391509 | None:intergenic |
| TGCGCCACAAAAGCCGAATG+GGG | 0.608074 | 4_2:-48396729 | None:intergenic |
| GAATTGAAGTGGGAAAGGGG+AGG | 0.610029 | 4_2:-48390024 | None:intergenic |
| GGCAACAGCTGCCTCTCTAG+AGG | 0.612746 | 4_2:-48391435 | None:intergenic |
| GAAGCAGCTGCGTTCAAATG+CGG | 0.613645 | 4_2:+48396693 | Msa0603740:CDS |
| TTATATGGCCGATCATATTG+GGG | 0.614014 | 4_2:+48391293 | Msa0603740:CDS |
| TCCCTGACAATCTTCTACCA+AGG | 0.614840 | 4_2:+48391020 | Msa0603740:CDS |
| ATTATTTAATCGTCTCGTTG+GGG | 0.616931 | 4_2:+48391081 | Msa0603740:CDS |
| TCTGTAACCCCGAACAAACA+AGG | 0.618188 | 4_2:-48393333 | None:intergenic |
| TTAACAAGTGCGAATCTCCA+CGG | 0.620781 | 4_2:+48391998 | Msa0603740:CDS |
| ATGCAGTGTAGAGAATGAGA+AGG | 0.622036 | 4_2:+48389830 | None:intergenic |
| CTATATTGAATCAAGTAGTG+CGG | 0.622529 | 4_2:+48396385 | Msa0603740:CDS |
| AAGCCTCCTCCCAGGACACG+AGG | 0.622603 | 4_2:+48396423 | Msa0603740:CDS |
| CTGCTCCCTGAAATTAACCA+AGG | 0.622956 | 4_2:+48397088 | Msa0603740:three_prime_UTR |
| GTGTGATCGTTGTAAACAAG+TGG | 0.623122 | 4_2:+48394964 | Msa0603740:CDS |
| ATTGGTATCAGCTACACAGT+AGG | 0.628610 | 4_2:+48396972 | Msa0603740:CDS |
| CTGGATATTAGTACAACCAT+CGG | 0.631405 | 4_2:+48391392 | Msa0603740:CDS |
| TTTCCACCTCGTGTCCTGGG+AGG | 0.635703 | 4_2:-48396429 | None:intergenic |
| CTGTTCAGTGATACAAGCCA+TGG | 0.639138 | 4_2:-48394739 | None:intergenic |
| CCTCCTCCCAGGACACGAGG+TGG | 0.641204 | 4_2:+48396426 | Msa0603740:CDS |
| ACTGAGTTGAAGATTTGGCG+GGG | 0.643300 | 4_2:-48389870 | None:intergenic |
| TATTCCCCTTGCCTCTAGAG+AGG | 0.646020 | 4_2:+48391424 | Msa0603740:CDS |
| GCGTGTTTACTATTGCACTC+AGG | 0.647063 | 4_2:+48396458 | Msa0603740:CDS |
| AGGACTACAAGATAGCTGAA+AGG | 0.648241 | 4_2:+48394919 | Msa0603740:intron |
| GGGAATACCATCCATACCGA+TGG | 0.648577 | 4_2:-48391408 | None:intergenic |
| GGGTGATGTAGTAAGAGATG+GGG | 0.649260 | 4_2:-48389964 | None:intergenic |
| TCCAACTTAACCATCTGAGG+GGG | 0.655815 | 4_2:-48397303 | None:intergenic |
| AAACTATGTGTTAAATTGTG+AGG | 0.662074 | 4_2:-48389893 | None:intergenic |
| GCGCCACAAAAGCCGAATGG+GGG | 0.663468 | 4_2:-48396728 | None:intergenic |
| GGGAAACAAGGCAATTGTGG+TGG | 0.663597 | 4_2:+48391244 | Msa0603740:intron |
| GGATGAGCCTGGAGTTACGA+GGG | 0.666716 | 4_2:+48391265 | Msa0603740:CDS |
| TTCACCGGCACTGAACTTCG+GGG | 0.667141 | 4_2:-48390110 | None:intergenic |
| GGTGATGTAGTAAGAGATGG+GGG | 0.667617 | 4_2:-48389963 | None:intergenic |
| GGAATTGGTTGAATTACCAG+AGG | 0.667978 | 4_2:+48390171 | Msa0603740:CDS |
| ACCGGCACTGAACTTCGGGG+TGG | 0.668278 | 4_2:-48390107 | None:intergenic |
| TGGATGAGCCTGGAGTTACG+AGG | 0.670954 | 4_2:+48391264 | Msa0603740:CDS |
| GCTGCCTCTCTAGAGGCAAG+GGG | 0.673323 | 4_2:-48391428 | None:intergenic |
| TGTGATCGTTGTAAACAAGT+GGG | 0.679644 | 4_2:+48394965 | Msa0603740:CDS |
| CAGTGGGAGAGAGATGCCAT+TGG | 0.680551 | 4_2:-48389929 | None:intergenic |
| ATCCAACTTAACCATCTGAG+GGG | 0.682103 | 4_2:-48397304 | None:intergenic |
| TTCATGGTGGTGGACACTGG+TGG | 0.685487 | 4_2:+48391326 | Msa0603740:CDS |
| ATTGTTGGAAGACCGAACGT+TGG | 0.687597 | 4_2:+48391049 | Msa0603740:CDS |
| ACAAAGAACACAAATGTAGG+CGG | 0.698786 | 4_2:-48396625 | None:intergenic |
| CTCAGCTGGAAGTACAACAG+AGG | 0.713750 | 4_2:+48394650 | Msa0603740:CDS |
| CGACGACGATGACTTACCAG+AGG | 0.714230 | 4_2:+48390150 | Msa0603740:CDS |
| GGGAGATCATGAATTCATGG+TGG | 0.762942 | 4_2:+48391313 | Msa0603740:CDS |
| TCCTTGGTAGAAGATTGTCA+GGG | 0.767046 | 4_2:-48391021 | None:intergenic |
| GTAGTGAAATGAGAAAATGG+GGG | 0.778778 | 4_2:-48389999 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTTTTATAATCGATTT+TGG | + | chr4_2:48392900-48392919 | Msa0603740:intron | 10.0% |
| !! | AATATTAATTATTAAACAAC+TGG | - | chr4_2:48394849-48394868 | None:intergenic | 10.0% |
| !! | TCAATTAAATATACAAATTT+AGG | - | chr4_2:48395332-48395351 | None:intergenic | 10.0% |
| !! | CTAAATTAAAAATTTATGAT+AGG | - | chr4_2:48395747-48395766 | None:intergenic | 10.0% |
| !! | TGATTAATTTAATTATGATG+TGG | + | chr4_2:48392436-48392455 | Msa0603740:intron | 15.0% |
| !! | AGAAGATAATTCAATATTTA+TGG | - | chr4_2:48393376-48393395 | None:intergenic | 15.0% |
| !! | ACAATTCAATATATTGATAA+TGG | + | chr4_2:48393840-48393859 | Msa0603740:intron | 15.0% |
| !! | AACTATTTCATATATCTTAA+AGG | + | chr4_2:48394899-48394918 | Msa0603740:intron | 15.0% |
| !!! | TTATTATTGTTTTGAACAAA+AGG | + | chr4_2:48396307-48396326 | Msa0603740:intron | 15.0% |
| !!! | AATTGCAAGTAATTTTTTAT+GGG | + | chr4_2:48397386-48397405 | Msa0603740:three_prime_UTR | 15.0% |
| !!! | ATACTAACAATTTTTCTCTT+CGG | - | chr4_2:48390475-48390494 | None:intergenic | 20.0% |
| !! | ATAAGTTACCATAAAAATTG+AGG | + | chr4_2:48390885-48390904 | Msa0603740:intron | 20.0% |
| !! | TGAAGAGATTGAAATAAATT+AGG | + | chr4_2:48390960-48390979 | Msa0603740:intron | 20.0% |
| !! | GAAGAGATTGAAATAAATTA+GGG | + | chr4_2:48390961-48390980 | Msa0603740:intron | 20.0% |
| !! | AATAAGAATCAAGATAAAGT+AGG | - | chr4_2:48391598-48391617 | None:intergenic | 20.0% |
| !! | TAATAATCATTACTGTCTTT+AGG | - | chr4_2:48391889-48391908 | None:intergenic | 20.0% |
| !! | TATCAGATTATATACTATGT+TGG | + | chr4_2:48392374-48392393 | Msa0603740:intron | 20.0% |
| !!! | AATTTAGCTCATTTTTTACT+AGG | + | chr4_2:48392539-48392558 | Msa0603740:intron | 20.0% |
| !!! | TTGTTTTACAGTATTGATTT+TGG | + | chr4_2:48392872-48392891 | Msa0603740:intron | 20.0% |
| !! | TTTGGTTAATATTATGTTTG+AGG | + | chr4_2:48392918-48392937 | Msa0603740:intron | 20.0% |
| !! | ATGAATCAACAATTTATCAT+TGG | - | chr4_2:48393483-48393502 | None:intergenic | 20.0% |
| !!! | TGATAAATTGTTGATTCATT+TGG | + | chr4_2:48393484-48393503 | Msa0603740:intron | 20.0% |
| !!! | TTCATTTTATGCTATACAAT+AGG | + | chr4_2:48393586-48393605 | Msa0603740:intron | 20.0% |
| !!! | TTTTAATTCTGGTTACAATA+AGG | + | chr4_2:48394801-48394820 | Msa0603740:intron | 20.0% |
| !! | AAAAAGAATCTGAATGATTA+TGG | - | chr4_2:48394874-48394893 | None:intergenic | 20.0% |
| !! | AATACAAATTTGAACATACA+TGG | + | chr4_2:48395297-48395316 | Msa0603740:intron | 20.0% |
| !!! | GATTTTTTGTTATAAAAGAG+AGG | - | chr4_2:48395648-48395667 | None:intergenic | 20.0% |
| !!! | TGGTAACAATTTTTTTTTGA+AGG | + | chr4_2:48395922-48395941 | Msa0603740:intron | 20.0% |
| !!! | TTTTTTTTGAAGGACTAAAA+TGG | + | chr4_2:48395932-48395951 | Msa0603740:intron | 20.0% |
| !!! | TCAGTATTTATTTTAAGTGT+TGG | + | chr4_2:48396780-48396799 | Msa0603740:intron | 20.0% |
| !! | AAAATTGAAACAAAAAACAG+AGG | - | chr4_2:48396832-48396851 | None:intergenic | 20.0% |
| !! | GATAAATTTACTAGTTATTG+AGG | - | chr4_2:48397249-48397268 | None:intergenic | 20.0% |
| !!! | AATTTATCTTTAGAAGTAGT+TGG | + | chr4_2:48397261-48397280 | Msa0603740:three_prime_UTR | 20.0% |
| !!! | ATTTATCTTTAGAAGTAGTT+GGG | + | chr4_2:48397262-48397281 | Msa0603740:three_prime_UTR | 20.0% |
| !!! | CAATTGCAAGTAATTTTTTA+TGG | + | chr4_2:48397385-48397404 | Msa0603740:three_prime_UTR | 20.0% |
| ! | AAACTATGTGTTAAATTGTG+AGG | - | chr4_2:48389896-48389915 | None:intergenic | 25.0% |
| !!! | ATTTGATTTTCTAATTCCTC+TGG | - | chr4_2:48390190-48390209 | None:intergenic | 25.0% |
| ! | ATTGAATAGAGAGTAGAATT+AGG | - | chr4_2:48390511-48390530 | None:intergenic | 25.0% |
| ! | CTGGTAATAATTTGAGAAAA+TGG | + | chr4_2:48390574-48390593 | Msa0603740:intron | 25.0% |
| ! | AACTAGTTACAAACAAAATG+TGG | - | chr4_2:48390914-48390933 | None:intergenic | 25.0% |
| !!! | GAATTTTCGTCTATTTTGAA+TGG | + | chr4_2:48390993-48391012 | Msa0603740:intron | 25.0% |
| ! | AAAATTAATTTCCCCAAAAC+AGG | - | chr4_2:48391155-48391174 | None:intergenic | 25.0% |
| !!! | GTTTTGGGGAAATTAATTTT+TGG | + | chr4_2:48391155-48391174 | Msa0603740:intron | 25.0% |
| !!! | TTTTGGAAATTTCGATGTTT+TGG | + | chr4_2:48391172-48391191 | Msa0603740:intron | 25.0% |
| !!! | ATAGTTGTTTCTTTTCTGTA+GGG | + | chr4_2:48391224-48391243 | Msa0603740:intron | 25.0% |
| ! | AAAATCACAAACTACTGTTA+TGG | + | chr4_2:48391364-48391383 | Msa0603740:CDS | 25.0% |
| !!! | TTTTGATGGTTATCAATTAC+CGG | + | chr4_2:48391676-48391695 | Msa0603740:intron | 25.0% |
| ! | TTTCTCCATTGAATTATTTG+CGG | + | chr4_2:48391741-48391760 | Msa0603740:intron | 25.0% |
| ! | TAATGATTATTATGCTGAAC+AGG | + | chr4_2:48391897-48391916 | Msa0603740:intron | 25.0% |
| !!! | ATATCAAGTTTTAGTCCTAA+GGG | - | chr4_2:48392182-48392201 | None:intergenic | 25.0% |
| !!! | TATATCAAGTTTTAGTCCTA+AGG | - | chr4_2:48392183-48392202 | None:intergenic | 25.0% |
| !! | ATTAGTTTAGATGTTGACAA+AGG | - | chr4_2:48392344-48392363 | None:intergenic | 25.0% |
| ! | GGTTAATGTTAAACTAAGTT+TGG | + | chr4_2:48392457-48392476 | Msa0603740:intron | 25.0% |
| !!! | AGCTAAATTTTAACGCATAA+AGG | - | chr4_2:48392528-48392547 | None:intergenic | 25.0% |
| ! | ATAAAGAAACTTCATTTCTC+TGG | + | chr4_2:48392701-48392720 | Msa0603740:intron | 25.0% |
| !! | AAGTAATTTTGCAGTAAACT+TGG | + | chr4_2:48392975-48392994 | Msa0603740:intron | 25.0% |
| !! | GGTATTGAAAGCATAAAATA+AGG | - | chr4_2:48393125-48393144 | None:intergenic | 25.0% |
| !! | ATTTTATGCTTTCAATACCA+TGG | + | chr4_2:48393126-48393145 | Msa0603740:intron | 25.0% |
| ! | ATCAACAATTTATCATTGGT+AGG | - | chr4_2:48393479-48393498 | None:intergenic | 25.0% |
| ! | AAGTGTAAGTAAGAAAATCA+AGG | - | chr4_2:48393568-48393587 | None:intergenic | 25.0% |
| ! | CATTCAAAGAAAAAAGTTAC+TGG | - | chr4_2:48393816-48393835 | None:intergenic | 25.0% |
| !!! | CAGTAACTTTTTTCTTTGAA+TGG | + | chr4_2:48393814-48393833 | Msa0603740:intron | 25.0% |
| ! | AAACCACTCATAATACAAAT+AGG | + | chr4_2:48393989-48394008 | Msa0603740:intron | 25.0% |
| ! | AACCACTCATAATACAAATA+GGG | + | chr4_2:48393990-48394009 | Msa0603740:intron | 25.0% |
| ! | ATAAGGCTATTAATTGGTTA+GGG | - | chr4_2:48394218-48394237 | None:intergenic | 25.0% |
| ! | TATAAGGCTATTAATTGGTT+AGG | - | chr4_2:48394219-48394238 | None:intergenic | 25.0% |
| ! | TATGGTATAAGGCTATTAAT+TGG | - | chr4_2:48394224-48394243 | None:intergenic | 25.0% |
| !! | CTAGTTAATTTGGTTAAATG+CGG | - | chr4_2:48394345-48394364 | None:intergenic | 25.0% |
| ! | CAAATAGTTGCTAGTTAATT+TGG | - | chr4_2:48394355-48394374 | None:intergenic | 25.0% |
| ! | CAAATTAACTAGCAACTATT+TGG | + | chr4_2:48394353-48394372 | Msa0603740:intron | 25.0% |
| !!! | ATTGGTAAGCTTTTAGAATT+TGG | + | chr4_2:48394537-48394556 | Msa0603740:intron | 25.0% |
| !! | AAATGTTGACAAGTAAGTTT+TGG | + | chr4_2:48395103-48395122 | Msa0603740:intron | 25.0% |
| ! | GAAAATCTTTGATTCATTGA+AGG | + | chr4_2:48395129-48395148 | Msa0603740:intron | 25.0% |
| !! | ATTGTTTTCTAGGCAAAATT+GGG | - | chr4_2:48395235-48395254 | None:intergenic | 25.0% |
| !! | AATTGTTTTCTAGGCAAAAT+TGG | - | chr4_2:48395236-48395255 | None:intergenic | 25.0% |
| ! | CAAATATGTATGCTTAAGAA+GGG | - | chr4_2:48395262-48395281 | None:intergenic | 25.0% |
| ! | ACAAATATGTATGCTTAAGA+AGG | - | chr4_2:48395263-48395282 | None:intergenic | 25.0% |
| ! | ATTCGTTACCTTGAATTTAT+GGG | - | chr4_2:48395448-48395467 | None:intergenic | 25.0% |
| !! | CGAATCTGTATTTTATTGAA+TGG | + | chr4_2:48395463-48395482 | Msa0603740:intron | 25.0% |
| ! | TTGTTATAAAAGAGAGGATA+GGG | - | chr4_2:48395642-48395661 | None:intergenic | 25.0% |
| !! | TTTGTTATAAAAGAGAGGAT+AGG | - | chr4_2:48395643-48395662 | None:intergenic | 25.0% |
| ! | TATGATAGGATACTAGATTT+GGG | - | chr4_2:48395733-48395752 | None:intergenic | 25.0% |
| ! | TTATGATAGGATACTAGATT+TGG | - | chr4_2:48395734-48395753 | None:intergenic | 25.0% |
| !!! | AATTTAGTTCTCCAAAGATT+AGG | + | chr4_2:48395760-48395779 | Msa0603740:intron | 25.0% |
| !!! | ATTTAGTTCTCCAAAGATTA+GGG | + | chr4_2:48395761-48395780 | Msa0603740:intron | 25.0% |
| ! | TAGAGACAAAAATCATTTGA+GGG | - | chr4_2:48395815-48395834 | None:intergenic | 25.0% |
| ! | TTAGAGACAAAAATCATTTG+AGG | - | chr4_2:48395816-48395835 | None:intergenic | 25.0% |
| !! | AGTCTTTAAAGATGTGAATT+TGG | + | chr4_2:48395839-48395858 | Msa0603740:intron | 25.0% |
| ! | GTGAAAATTTGTATCTTTGT+AGG | + | chr4_2:48395861-48395880 | Msa0603740:intron | 25.0% |
| !! | AAATTTCCTTTGTCATTTCT+GGG | + | chr4_2:48396034-48396053 | Msa0603740:intron | 25.0% |
| !!! | TTAAGAACTTGGCTATTTTT+GGG | + | chr4_2:48396084-48396103 | Msa0603740:intron | 25.0% |
| !!! | TTTTTGGGATCTTTTCTATT+TGG | + | chr4_2:48396099-48396118 | Msa0603740:intron | 25.0% |
| !!! | TTTTGGGATCTTTTCTATTT+GGG | + | chr4_2:48396100-48396119 | Msa0603740:intron | 25.0% |
| !!! | TTTGTTTTTTTTCCTTCTTC+TGG | + | chr4_2:48396134-48396153 | Msa0603740:intron | 25.0% |
| ! | ACAATAAAAAATATCAGACC+TGG | - | chr4_2:48396254-48396273 | None:intergenic | 25.0% |
| ! | AGAAAAATGGAAAAAGATGA+AGG | + | chr4_2:48396757-48396776 | Msa0603740:CDS | 25.0% |
| !! | TGTGACGAAAAATTTTCTTT+AGG | - | chr4_2:48396943-48396962 | None:intergenic | 25.0% |
| ! | AATATTATCATCCAAACTTC+TGG | - | chr4_2:48397145-48397164 | None:intergenic | 25.0% |
| !!! | ATCCTTTTGGTAATTTTAGT+GGG | + | chr4_2:48397184-48397203 | Msa0603740:three_prime_UTR | 25.0% |
| !! | TTTTCAAAGTTTGTAGTTTG+AGG | + | chr4_2:48397208-48397227 | Msa0603740:three_prime_UTR | 25.0% |
| !!! | GATATTTTCTAGTGATTACA+CGG | + | chr4_2:48397324-48397343 | Msa0603740:three_prime_UTR | 25.0% |
| TGTAGTGAAATGAGAAAATG+GGG | - | chr4_2:48390003-48390022 | None:intergenic | 30.0% | |
| GTGTAGTGAAATGAGAAAAT+GGG | - | chr4_2:48390004-48390023 | None:intergenic | 30.0% | |
| CTGCAAAAGTAAGTAAAAAC+TGG | - | chr4_2:48390350-48390369 | None:intergenic | 30.0% | |
| ATTATTACCAGTGTCATGTT+CGG | - | chr4_2:48390565-48390584 | None:intergenic | 30.0% | |
| CCTAAATTCTTTCACTTTGT+AGG | - | chr4_2:48390623-48390642 | None:intergenic | 30.0% | |
| CCTACAAAGTGAAAGAATTT+AGG | + | chr4_2:48390620-48390639 | Msa0603740:intron | 30.0% | |
| TCTAAATTTCATGTGCTAAC+TGG | + | chr4_2:48390648-48390667 | Msa0603740:intron | 30.0% | |
| CATTATTTAATCGTCTCGTT+GGG | + | chr4_2:48391080-48391099 | Msa0603740:CDS | 30.0% | |
| ATTATTTAATCGTCTCGTTG+GGG | + | chr4_2:48391081-48391100 | Msa0603740:CDS | 30.0% | |
| !!! | TTATTGATTCTGTCCTGTTT+TGG | + | chr4_2:48391139-48391158 | Msa0603740:intron | 30.0% |
| !!! | TATTGATTCTGTCCTGTTTT+GGG | + | chr4_2:48391140-48391159 | Msa0603740:intron | 30.0% |
| GAAAAGAAACAACTATCGTA+AGG | - | chr4_2:48391220-48391239 | None:intergenic | 30.0% | |
| !!! | GATAGTTGTTTCTTTTCTGT+AGG | + | chr4_2:48391223-48391242 | Msa0603740:intron | 30.0% |
| AATATGATCGGCCATATAAA+CGG | - | chr4_2:48391292-48391311 | None:intergenic | 30.0% | |
| TTTATATGGCCGATCATATT+GGG | + | chr4_2:48391292-48391311 | Msa0603740:CDS | 30.0% | |
| AGATAAAGTAGGTACATACA+TGG | - | chr4_2:48391587-48391606 | None:intergenic | 30.0% | |
| !!! | GCGATTTTTACTTGTTTTGA+TGG | + | chr4_2:48391662-48391681 | Msa0603740:intron | 30.0% |
| ! | TGTCTTTAGGTTATGGTTAT+TGG | - | chr4_2:48391876-48391895 | None:intergenic | 30.0% |
| ! | TCATTACTGTCTTTAGGTTA+TGG | - | chr4_2:48391883-48391902 | None:intergenic | 30.0% |
| TACTGTCAAATTCATGGATA+CGG | + | chr4_2:48392226-48392245 | Msa0603740:intron | 30.0% | |
| ! | GGCTAATTCAACTTACATTT+TGG | + | chr4_2:48392478-48392497 | Msa0603740:intron | 30.0% |
| AACTATTAAGAGGAAACATG+AGG | - | chr4_2:48392570-48392589 | None:intergenic | 30.0% | |
| TTCTCAAGCAAACTATTAAG+AGG | - | chr4_2:48392580-48392599 | None:intergenic | 30.0% | |
| TTGCTTGAGAAATTGTATGT+AGG | + | chr4_2:48392589-48392608 | Msa0603740:intron | 30.0% | |
| TGCTTGAGAAATTGTATGTA+GGG | + | chr4_2:48392590-48392609 | Msa0603740:intron | 30.0% | |
| TTTGCACTTCTAAACTAGAA+TGG | + | chr4_2:48393032-48393051 | Msa0603740:intron | 30.0% | |
| AAAATCAAGTTTGTCCTCAA+TGG | - | chr4_2:48393064-48393083 | None:intergenic | 30.0% | |
| ATTAGAACATATGACACTTG+GGG | - | chr4_2:48393221-48393240 | None:intergenic | 30.0% | |
| GATTAGAACATATGACACTT+GGG | - | chr4_2:48393222-48393241 | None:intergenic | 30.0% | |
| TGATTAGAACATATGACACT+TGG | - | chr4_2:48393223-48393242 | None:intergenic | 30.0% | |
| AATCAACAAGTTCATTGCTA+TGG | + | chr4_2:48393238-48393257 | Msa0603740:intron | 30.0% | |
| GCTATGGTTAATGATATATC+AGG | + | chr4_2:48393254-48393273 | Msa0603740:intron | 30.0% | |
| GATATAGCTGATATTGGAAT+TGG | - | chr4_2:48393286-48393305 | None:intergenic | 30.0% | |
| ATTCCAATATCAGCTATATC+AGG | + | chr4_2:48393286-48393305 | Msa0603740:CDS | 30.0% | |
| TTCCAATATCAGCTATATCA+GGG | + | chr4_2:48393287-48393306 | Msa0603740:CDS | 30.0% | |
| CATTGACAATGAGTAACTTT+AGG | + | chr4_2:48393404-48393423 | Msa0603740:intron | 30.0% | |
| GATACTTTATATTGTGTAGC+AGG | + | chr4_2:48393428-48393447 | Msa0603740:intron | 30.0% | |
| GATTAAAACAAATTGATCCC+TGG | - | chr4_2:48393533-48393552 | None:intergenic | 30.0% | |
| GCTATTGATACTGAATTTAC+TGG | + | chr4_2:48393755-48393774 | Msa0603740:intron | 30.0% | |
| ! | ATAATGGAAAAGAGTACATG+TGG | + | chr4_2:48393856-48393875 | Msa0603740:intron | 30.0% |
| TGTACTCATTTCCATTCTTT+GGG | - | chr4_2:48393889-48393908 | None:intergenic | 30.0% | |
| TTGTACTCATTTCCATTCTT+TGG | - | chr4_2:48393890-48393909 | None:intergenic | 30.0% | |
| ACTAAGGACACAGAAAATAA+AGG | + | chr4_2:48393927-48393946 | Msa0603740:intron | 30.0% | |
| TATCTAATCATACAGTCGAA+GGG | + | chr4_2:48393960-48393979 | Msa0603740:intron | 30.0% | |
| AACCCTATTTGTATTATGAG+TGG | - | chr4_2:48393995-48394014 | None:intergenic | 30.0% | |
| TGCAAAGTCAAAACATTTCT+TGG | - | chr4_2:48394046-48394065 | None:intergenic | 30.0% | |
| TAAGGCTATTAATTGGTTAG+GGG | - | chr4_2:48394217-48394236 | None:intergenic | 30.0% | |
| ! | CTATAGCTCTATATGGTATA+AGG | - | chr4_2:48394235-48394254 | None:intergenic | 30.0% |
| TAAACATCATAAGTAGTCAC+TGG | - | chr4_2:48394400-48394419 | None:intergenic | 30.0% | |
| ACCAGATTGTAATAGTGAAT+TGG | + | chr4_2:48394519-48394538 | Msa0603740:intron | 30.0% | |
| ACCAATTCACTATTACAATC+TGG | - | chr4_2:48394523-48394542 | None:intergenic | 30.0% | |
| !!! | CACAGATCTGTTTTTAATTC+TGG | + | chr4_2:48394790-48394809 | Msa0603740:intron | 30.0% |
| CTGAAAGGATAGAAAAAGAA+GGG | + | chr4_2:48394934-48394953 | Msa0603740:CDS | 30.0% | |
| TGATAGAACCCATAAATTCA+AGG | + | chr4_2:48395437-48395456 | Msa0603740:intron | 30.0% | |
| GATTCGTTACCTTGAATTTA+TGG | - | chr4_2:48395449-48395468 | None:intergenic | 30.0% | |
| TGGTGAAAATGCAAAAGAAA+TGG | + | chr4_2:48395512-48395531 | Msa0603740:intron | 30.0% | |
| ! | CAGAGAATAAAGTATCCTAA+CGG | + | chr4_2:48395582-48395601 | Msa0603740:intron | 30.0% |
| TGTTATAAAAGAGAGGATAG+GGG | - | chr4_2:48395641-48395660 | None:intergenic | 30.0% | |
| GATGACATTATAGTCTTTGA+AGG | + | chr4_2:48395892-48395911 | Msa0603740:intron | 30.0% | |
| AAACTCTAAATTTGATCCTC+TGG | - | chr4_2:48395972-48395991 | None:intergenic | 30.0% | |
| TACTAGTATTTCTTGATGTG+TGG | + | chr4_2:48396005-48396024 | Msa0603740:intron | 30.0% | |
| ! | GAAATTTCCTTTGTCATTTC+TGG | + | chr4_2:48396033-48396052 | Msa0603740:intron | 30.0% |
| ! | AATTTCCTTTGTCATTTCTG+GGG | + | chr4_2:48396035-48396054 | Msa0603740:intron | 30.0% |
| TGGAAATGAACTTAAGAACT+TGG | + | chr4_2:48396073-48396092 | Msa0603740:intron | 30.0% | |
| !! | CTTAAGAACTTGGCTATTTT+TGG | + | chr4_2:48396083-48396102 | Msa0603740:intron | 30.0% |
| !! | GATCTTTTCTATTTGGGTTT+GGG | + | chr4_2:48396106-48396125 | Msa0603740:intron | 30.0% |
| GTTAAAATTACGACTTATCC+AGG | + | chr4_2:48396233-48396252 | Msa0603740:intron | 30.0% | |
| CTATATTGAATCAAGTAGTG+CGG | + | chr4_2:48396385-48396404 | Msa0603740:CDS | 30.0% | |
| TATATTGAATCAAGTAGTGC+GGG | + | chr4_2:48396386-48396405 | Msa0603740:CDS | 30.0% | |
| TTGACAAAGAACACAAATGT+AGG | - | chr4_2:48396631-48396650 | None:intergenic | 30.0% | |
| !! | AACTTTTTCCTGAAACTTAC+CGG | + | chr4_2:48396659-48396678 | Msa0603740:CDS | 30.0% |
| !! | TGTATATGTGATTTGCTTAC+AGG | + | chr4_2:48396901-48396920 | Msa0603740:intron | 30.0% |
| !! | TGATTTGCTTACAGGAAAAA+AGG | + | chr4_2:48396909-48396928 | Msa0603740:intron | 30.0% |
| !! | GCCATTTTATCATATAGAAG+AGG | + | chr4_2:48396999-48397018 | Msa0603740:three_prime_UTR | 30.0% |
| GCCTCTTCTATATGATAAAA+TGG | - | chr4_2:48397003-48397022 | None:intergenic | 30.0% | |
| ! | TTTTATCATATAGAAGAGGC+TGG | + | chr4_2:48397003-48397022 | Msa0603740:three_prime_UTR | 30.0% |
| ACTAACCTTGGTTAATTTCA+GGG | - | chr4_2:48397096-48397115 | None:intergenic | 30.0% | |
| TACTAACCTTGGTTAATTTC+AGG | - | chr4_2:48397097-48397116 | None:intergenic | 30.0% | |
| !! | GATCCTTTTGGTAATTTTAG+TGG | + | chr4_2:48397183-48397202 | Msa0603740:three_prime_UTR | 30.0% |
| !!! | TGCAAGTAATTTTTTATGGG+TGG | + | chr4_2:48397389-48397408 | Msa0603740:three_prime_UTR | 30.0% |
| ! | TTTCACTTTGACTTCACCAA+TGG | + | chr4_2:48389913-48389932 | Msa0603740:exon | 35.0% |
| GTAGTGAAATGAGAAAATGG+GGG | - | chr4_2:48390002-48390021 | None:intergenic | 35.0% | |
| GGTGTAGTGAAATGAGAAAA+TGG | - | chr4_2:48390005-48390024 | None:intergenic | 35.0% | |
| AACATCAACATCATCGTCAT+CGG | - | chr4_2:48390224-48390243 | None:intergenic | 35.0% | |
| !!! | TTATCTCGCGTTTTGACTAT+CGG | + | chr4_2:48390295-48390314 | Msa0603740:CDS | 35.0% |
| TTTGAGAAAATGGCATGTGT+CGG | + | chr4_2:48390584-48390603 | Msa0603740:intron | 35.0% | |
| !! | ACACTTTTGATGAGAAGTGT+GGG | + | chr4_2:48390831-48390850 | Msa0603740:intron | 35.0% |
| GCATTATTTAATCGTCTCGT+TGG | + | chr4_2:48391079-48391098 | Msa0603740:CDS | 35.0% | |
| !! | ATTGATTCTGTCCTGTTTTG+GGG | + | chr4_2:48391141-48391160 | Msa0603740:intron | 35.0% |
| !!! | TCGATGTTTTGGAATCTGAA+TGG | + | chr4_2:48391183-48391202 | Msa0603740:intron | 35.0% |
| !!! | ATGTTTTGGAATCTGAATGG+TGG | + | chr4_2:48391186-48391205 | Msa0603740:intron | 35.0% |
| ! | TTCTTTTCTGTAGGGAAACA+AGG | + | chr4_2:48391232-48391251 | Msa0603740:intron | 35.0% |
| GTTTATATGGCCGATCATAT+TGG | + | chr4_2:48391291-48391310 | Msa0603740:CDS | 35.0% | |
| TTATATGGCCGATCATATTG+GGG | + | chr4_2:48391293-48391312 | Msa0603740:CDS | 35.0% | |
| AACTACTGTTATGGAAGATC+TGG | + | chr4_2:48391373-48391392 | Msa0603740:CDS | 35.0% | |
| CTGGATATTAGTACAACCAT+CGG | + | chr4_2:48391392-48391411 | Msa0603740:CDS | 35.0% | |
| TATTAGTACAACCATCGGTA+TGG | + | chr4_2:48391397-48391416 | Msa0603740:CDS | 35.0% | |
| !! | AAAAGCTTTGAAGATTCAGC+CGG | - | chr4_2:48391714-48391733 | None:intergenic | 35.0% |
| TGGTACCGCAAATAATTCAA+TGG | - | chr4_2:48391749-48391768 | None:intergenic | 35.0% | |
| ! | TTATGCAGGTGTCTGAATTT+TGG | + | chr4_2:48392028-48392047 | Msa0603740:CDS | 35.0% |
| ! | CTTCTGATGTTTTCTTCACA+TGG | + | chr4_2:48392155-48392174 | Msa0603740:intron | 35.0% |
| GTTGTCTACTGTCAAATTCA+TGG | + | chr4_2:48392220-48392239 | Msa0603740:intron | 35.0% | |
| AAAACCATCTTTGACATCGA+CGG | - | chr4_2:48392305-48392324 | None:intergenic | 35.0% | |
| TTTAGATGTTGACAAAGGTG+AGG | - | chr4_2:48392339-48392358 | None:intergenic | 35.0% | |
| TATGCTCAGACATAAGATCT+TGG | + | chr4_2:48392619-48392638 | Msa0603740:intron | 35.0% | |
| ! | ATGTTTTGTCTCGTATGTTC+AGG | - | chr4_2:48392783-48392802 | None:intergenic | 35.0% |
| !!! | GTGTGTTGAGTTGAGAATTT+TGG | - | chr4_2:48393002-48393021 | None:intergenic | 35.0% |
| !!! | TAGAATGGTTTTGACCATTG+AGG | + | chr4_2:48393047-48393066 | Msa0603740:intron | 35.0% |
| AGCATAAAATAAGGTTGTGC+AGG | - | chr4_2:48393116-48393135 | None:intergenic | 35.0% | |
| ! | TCTTCTTGACCTTGTTTGTT+CGG | + | chr4_2:48393324-48393343 | Msa0603740:CDS | 35.0% |
| ! | TTTTTCATCACCATACAACC+AGG | + | chr4_2:48393512-48393531 | Msa0603740:intron | 35.0% |
| ! | TTTTCATCACCATACAACCA+GGG | + | chr4_2:48393513-48393532 | Msa0603740:intron | 35.0% |
| TCTTCTTCAACAAGATTCTG+TGG | - | chr4_2:48393614-48393633 | None:intergenic | 35.0% | |
| GTTCCAGCAATTTCAATTGT+TGG | + | chr4_2:48393641-48393660 | Msa0603740:CDS | 35.0% | |
| CTACCAACAATTGAAATTGC+TGG | - | chr4_2:48393647-48393666 | None:intergenic | 35.0% | |
| ! | ATTGTTGGTAGACCAAATGT+TGG | + | chr4_2:48393656-48393675 | Msa0603740:CDS | 35.0% |
| !!! | ATGCTACTTTTGCCAACATT+TGG | - | chr4_2:48393671-48393690 | None:intergenic | 35.0% |
| ! | AAGTAGCATTTTGAATGCAC+TGG | + | chr4_2:48393682-48393701 | Msa0603740:CDS | 35.0% |
| AGAATGGAAATGAGTACAAG+TGG | + | chr4_2:48393891-48393910 | Msa0603740:intron | 35.0% | |
| CTTCGACTGTATGATTAGAT+AGG | - | chr4_2:48393961-48393980 | None:intergenic | 35.0% | |
| CTATCTAATCATACAGTCGA+AGG | + | chr4_2:48393959-48393978 | Msa0603740:intron | 35.0% | |
| TGGCTCTTGGCTAAAAAAAT+GGG | - | chr4_2:48394020-48394039 | None:intergenic | 35.0% | |
| ATGGCTCTTGGCTAAAAAAA+TGG | - | chr4_2:48394021-48394040 | None:intergenic | 35.0% | |
| GTCAAAACATTTCTTGGCAA+TGG | - | chr4_2:48394040-48394059 | None:intergenic | 35.0% | |
| ACCATATAGAGCTATAGAAC+AGG | + | chr4_2:48394238-48394257 | Msa0603740:intron | 35.0% | |
| !!! | CTTTTAGAATTTGGTTCAGC+AGG | + | chr4_2:48394546-48394565 | Msa0603740:intron | 35.0% |
| TTCCATCTTATTGATACTGC+TGG | + | chr4_2:48394603-48394622 | Msa0603740:CDS | 35.0% | |
| TTCCAGCAGTATCAATAAGA+TGG | - | chr4_2:48394608-48394627 | None:intergenic | 35.0% | |
| TTATTGATACTGCTGGAATC+AGG | + | chr4_2:48394610-48394629 | Msa0603740:CDS | 35.0% | |
| GCTGAAAGGATAGAAAAAGA+AGG | + | chr4_2:48394933-48394952 | Msa0603740:CDS | 35.0% | |
| AGGATAGAAAAAGAAGGGAA+AGG | + | chr4_2:48394939-48394958 | Msa0603740:CDS | 35.0% | |
| TGTGATCGTTGTAAACAAGT+GGG | + | chr4_2:48394965-48394984 | Msa0603740:CDS | 35.0% | |
| !!! | GCAGTCTGCTGATTTTTATT+TGG | - | chr4_2:48394999-48395018 | None:intergenic | 35.0% |
| AGAGCAGTAGAATAAACTAC+TGG | - | chr4_2:48395074-48395093 | None:intergenic | 35.0% | |
| TTTATTCTACTGCTCTAGCT+GGG | + | chr4_2:48395078-48395097 | Msa0603740:CDS | 35.0% | |
| ! | GAAGGGAGAAATTGTTTTCT+AGG | - | chr4_2:48395245-48395264 | None:intergenic | 35.0% |
| CATTAGCAATTGCAATGTAG+TGG | + | chr4_2:48395352-48395371 | Msa0603740:intron | 35.0% | |
| ! | ATTGTCTCTGCAGAATTTTG+TGG | + | chr4_2:48395405-48395424 | Msa0603740:intron | 35.0% |
| ! | GTTAGGAGTTCTAGTAACTT+TGG | - | chr4_2:48395543-48395562 | None:intergenic | 35.0% |
| GGATACTTTATTCTCTGGTT+AGG | - | chr4_2:48395579-48395598 | None:intergenic | 35.0% | |
| CGTTAGGATACTTTATTCTC+TGG | - | chr4_2:48395584-48395603 | None:intergenic | 35.0% | |
| ! | TGGCAATATTTTGTTAGGAG+GGG | - | chr4_2:48395670-48395689 | None:intergenic | 35.0% |
| ! | GTGGCAATATTTTGTTAGGA+GGG | - | chr4_2:48395671-48395690 | None:intergenic | 35.0% |
| ! | TGACGTGGCAATATTTTGTT+AGG | - | chr4_2:48395675-48395694 | None:intergenic | 35.0% |
| TGTCATAACACCCTAATCTT+TGG | - | chr4_2:48395774-48395793 | None:intergenic | 35.0% | |
| ! | TAGTCTTTGAAGGACTAATC+TGG | + | chr4_2:48395902-48395921 | Msa0603740:intron | 35.0% |
| ! | ATTTGATCCTCTGGAAAGTA+GGG | - | chr4_2:48395963-48395982 | None:intergenic | 35.0% |
| ! | AATTTGATCCTCTGGAAAGT+AGG | - | chr4_2:48395964-48395983 | None:intergenic | 35.0% |
| !! | GGATCTTTTCTATTTGGGTT+TGG | + | chr4_2:48396105-48396124 | Msa0603740:intron | 35.0% |
| TACATGATACATCCAGAAGA+AGG | - | chr4_2:48396149-48396168 | None:intergenic | 35.0% | |
| ! | TGTATCATGTAACTAGTCTG+TGG | + | chr4_2:48396158-48396177 | Msa0603740:intron | 35.0% |
| ACTAATCAGCTACTCACTTA+GGG | - | chr4_2:48396285-48396304 | None:intergenic | 35.0% | |
| AACTAATCAGCTACTCACTT+AGG | - | chr4_2:48396286-48396305 | None:intergenic | 35.0% | |
| ACAAAGAACACAAATGTAGG+CGG | - | chr4_2:48396628-48396647 | None:intergenic | 35.0% | |
| ATCACATATACATGCATCAC+TGG | - | chr4_2:48396893-48396912 | None:intergenic | 35.0% | |
| TTACAGGAAAAAAGGTGACA+AGG | + | chr4_2:48396917-48396936 | Msa0603740:intron | 35.0% | |
| ! | TAGCTGATACCAATTTTCGA+CGG | - | chr4_2:48396966-48396985 | None:intergenic | 35.0% |
| ! | TACAGTGATTGTGATCCTTT+TGG | + | chr4_2:48397171-48397190 | Msa0603740:three_prime_UTR | 35.0% |
| AGCCCACTAAAATTACCAAA+AGG | - | chr4_2:48397189-48397208 | None:intergenic | 35.0% | |
| TATCCAACTTAACCATCTGA+GGG | - | chr4_2:48397308-48397327 | None:intergenic | 35.0% | |
| ATATCCAACTTAACCATCTG+AGG | - | chr4_2:48397309-48397328 | None:intergenic | 35.0% | |
| GCAAAAGTTTCAGCATCATT+CGG | - | chr4_2:48397361-48397380 | None:intergenic | 35.0% | |
| ! | TGAGGACTGAGTTGAAGATT+TGG | - | chr4_2:48389878-48389897 | None:intergenic | 40.0% |
| AAATGAGAAAATGGGGGTTG+GGG | - | chr4_2:48389996-48390015 | None:intergenic | 40.0% | |
| GAAATGAGAAAATGGGGGTT+GGG | - | chr4_2:48389997-48390016 | None:intergenic | 40.0% | |
| TGAAATGAGAAAATGGGGGT+TGG | - | chr4_2:48389998-48390017 | None:intergenic | 40.0% | |
| GAAGAATTGAAGTGGGAAAG+GGG | - | chr4_2:48390030-48390049 | None:intergenic | 40.0% | |
| CGAAGAATTGAAGTGGGAAA+GGG | - | chr4_2:48390031-48390050 | None:intergenic | 40.0% | |
| AGTGAGCGAAGAATTGAAGT+GGG | - | chr4_2:48390037-48390056 | None:intergenic | 40.0% | |
| AAGTGAGCGAAGAATTGAAG+TGG | - | chr4_2:48390038-48390057 | None:intergenic | 40.0% | |
| GGTAATTCAACCAATTCCTC+TGG | - | chr4_2:48390169-48390188 | None:intergenic | 40.0% | |
| GGAATTGGTTGAATTACCAG+AGG | + | chr4_2:48390171-48390190 | Msa0603740:CDS | 40.0% | |
| AGATGAGAGAAGTGATGTCA+AGG | + | chr4_2:48390420-48390439 | Msa0603740:intron | 40.0% | |
| GAGAAGTGATGTCAAGGAAA+CGG | + | chr4_2:48390426-48390445 | Msa0603740:intron | 40.0% | |
| AGAAGTGATGTCAAGGAAAC+GGG | + | chr4_2:48390427-48390446 | Msa0603740:intron | 40.0% | |
| AAACGGGTAAAAACTCCAAG+AGG | + | chr4_2:48390443-48390462 | Msa0603740:intron | 40.0% | |
| ACGTGTCAGATATTTGACAC+CGG | + | chr4_2:48390806-48390825 | Msa0603740:intron | 40.0% | |
| ! | CTTCTCATCAAAAGTGTGTC+CGG | - | chr4_2:48390828-48390847 | None:intergenic | 40.0% |
| ! | CACACTTTTGATGAGAAGTG+TGG | + | chr4_2:48390830-48390849 | Msa0603740:intron | 40.0% |
| ! | TGTGGCTGCCTCAATTTTTA+TGG | - | chr4_2:48390896-48390915 | None:intergenic | 40.0% |
| TCCTTGGTAGAAGATTGTCA+GGG | - | chr4_2:48391024-48391043 | None:intergenic | 40.0% | |
| ATCCTTGGTAGAAGATTGTC+AGG | - | chr4_2:48391025-48391044 | None:intergenic | 40.0% | |
| ! | CTACCAAGGATTGCTATTGT+TGG | + | chr4_2:48391034-48391053 | Msa0603740:CDS | 40.0% |
| CTTCCAACAATAGCAATCCT+TGG | - | chr4_2:48391040-48391059 | None:intergenic | 40.0% | |
| CATGATCTCCCCAATATGAT+CGG | - | chr4_2:48391304-48391323 | None:intergenic | 40.0% | |
| TTGGGGAGATCATGAATTCA+TGG | + | chr4_2:48391310-48391329 | Msa0603740:CDS | 40.0% | |
| AGATCATGAATTCATGGTGG+TGG | + | chr4_2:48391316-48391335 | Msa0603740:CDS | 40.0% | |
| GCTTGTCTCTCAATCATTGA+CGG | - | chr4_2:48391467-48391486 | None:intergenic | 40.0% | |
| ! | ATCACCTGCTATCATTTTCC+TGG | + | chr4_2:48391505-48391524 | Msa0603740:CDS | 40.0% |
| TCAACCAGGAAAATGATAGC+AGG | - | chr4_2:48391512-48391531 | None:intergenic | 40.0% | |
| ! | GCTATCATTTTCCTGGTTGA+TGG | + | chr4_2:48391512-48391531 | Msa0603740:CDS | 40.0% |
| AGGTACATACATGGAAGAGA+AGG | - | chr4_2:48391578-48391597 | None:intergenic | 40.0% | |
| TGATGGTTATCAATTACCGG+TGG | + | chr4_2:48391679-48391698 | Msa0603740:intron | 40.0% | |
| TGTGTTATCTGTGGCAAGAT+TGG | - | chr4_2:48391769-48391788 | None:intergenic | 40.0% | |
| GATTATTATGCTGAACAGGC+AGG | + | chr4_2:48391901-48391920 | Msa0603740:intron | 40.0% | |
| TTAACAAGTGCGAATCTCCA+CGG | + | chr4_2:48391998-48392017 | Msa0603740:CDS | 40.0% | |
| TCCACGGAAAAGAATTATGC+AGG | + | chr4_2:48392014-48392033 | Msa0603740:CDS | 40.0% | |
| ! | ACCTGCATAATTCTTTTCCG+TGG | - | chr4_2:48392018-48392037 | None:intergenic | 40.0% |
| TATCAGTGGAGGATACATAC+TGG | + | chr4_2:48392067-48392086 | Msa0603740:intron | 40.0% | |
| TGACAAAACACCGTAGAACT+TGG | + | chr4_2:48392095-48392114 | Msa0603740:intron | 40.0% | |
| AGTGTCAAGACCAAGTTCTA+CGG | - | chr4_2:48392108-48392127 | None:intergenic | 40.0% | |
| ! | TTTTCTTCACATGGTCCCTT+AGG | + | chr4_2:48392164-48392183 | Msa0603740:intron | 40.0% |
| !! | GTTTTTCAATGTGCCTCAAC+TGG | + | chr4_2:48392248-48392267 | Msa0603740:intron | 40.0% |
| CTTCATTTCTCTGGCTGATT+TGG | + | chr4_2:48392710-48392729 | Msa0603740:intron | 40.0% | |
| CTTTCAATACCATGGTTGAG+TGG | + | chr4_2:48393134-48393153 | Msa0603740:intron | 40.0% | |
| ACAGTATAACCACTCAACCA+TGG | - | chr4_2:48393146-48393165 | None:intergenic | 40.0% | |
| GTCCCTGATATAGCTGATAT+TGG | - | chr4_2:48393292-48393311 | None:intergenic | 40.0% | |
| ATATCAGCTATATCAGGGAC+TGG | + | chr4_2:48393292-48393311 | Msa0603740:CDS | 40.0% | |
| ! | CTTCTTGACCTTGTTTGTTC+GGG | + | chr4_2:48393325-48393344 | Msa0603740:CDS | 40.0% |
| ! | TTCTTGACCTTGTTTGTTCG+GGG | + | chr4_2:48393326-48393345 | Msa0603740:CDS | 40.0% |
| CAAATTGATCCCTGGTTGTA+TGG | - | chr4_2:48393525-48393544 | None:intergenic | 40.0% | |
| !! | AGCATTTTGAATGCACTGGT+TGG | + | chr4_2:48393686-48393705 | Msa0603740:intron | 40.0% |
| ACTGAATTTACTGGACCAGA+TGG | + | chr4_2:48393764-48393783 | Msa0603740:intron | 40.0% | |
| !! | ATGGCCAGGTTTGTTTCTTT+TGG | + | chr4_2:48393783-48393802 | Msa0603740:intron | 40.0% |
| GTCACCAAAAGAAACAAACC+TGG | - | chr4_2:48393790-48393809 | None:intergenic | 40.0% | |
| !! | TGGCACTGATTCACAAACTA+AGG | + | chr4_2:48393911-48393930 | Msa0603740:intron | 40.0% |
| !! | GACACTTTGGTTGATTTGGA+AGG | - | chr4_2:48394091-48394110 | None:intergenic | 40.0% |
| ACTCGACACTTTGGTTGATT+TGG | - | chr4_2:48394095-48394114 | None:intergenic | 40.0% | |
| AGCCAGGATATCAGAGTTAA+GGG | - | chr4_2:48394135-48394154 | None:intergenic | 40.0% | |
| !!! | TTGTTGTTTTCATCTCAGCC+AGG | - | chr4_2:48394151-48394170 | None:intergenic | 40.0% |
| !! | TAATTGGTTAGGGGCATCAA+TGG | - | chr4_2:48394208-48394227 | None:intergenic | 40.0% |
| ! | GCCTGTTCTATAGCTCTATA+TGG | - | chr4_2:48394242-48394261 | None:intergenic | 40.0% |
| !! | AAATGCGGTGTCTTTAAGGT+GGG | - | chr4_2:48394330-48394349 | None:intergenic | 40.0% |
| ! | TAAATGCGGTGTCTTTAAGG+TGG | - | chr4_2:48394331-48394350 | None:intergenic | 40.0% |
| GGTTAAATGCGGTGTCTTTA+AGG | - | chr4_2:48394334-48394353 | None:intergenic | 40.0% | |
| ! | GTAGTCACTGGATTTTTCTG+TGG | - | chr4_2:48394388-48394407 | None:intergenic | 40.0% |
| TAAACCACCAACGTTTGGAT+GGG | - | chr4_2:48394478-48394497 | None:intergenic | 40.0% | |
| TTAAACCACCAACGTTTGGA+TGG | - | chr4_2:48394479-48394498 | None:intergenic | 40.0% | |
| !! | ATCCAAACGTTGGTGGTTTA+AGG | + | chr4_2:48394478-48394497 | Msa0603740:intron | 40.0% |
| ATACTGCTGGAATCAGGAAA+AGG | + | chr4_2:48394616-48394635 | Msa0603740:CDS | 40.0% | |
| ! | ATCGTGCATTTCGTGCTATT+AGG | + | chr4_2:48394685-48394704 | Msa0603740:CDS | 40.0% |
| TGTTGTTGCTCTTGTCATTG+AGG | + | chr4_2:48394716-48394735 | Msa0603740:CDS | 40.0% | |
| AGGACTACAAGATAGCTGAA+AGG | + | chr4_2:48394919-48394938 | Msa0603740:intron | 40.0% | |
| GTGTGATCGTTGTAAACAAG+TGG | + | chr4_2:48394964-48394983 | Msa0603740:CDS | 40.0% | |
| ACAAGCTTCGCTTACTTGAT+TGG | + | chr4_2:48395045-48395064 | Msa0603740:CDS | 40.0% | |
| CAAGCTTCGCTTACTTGATT+GGG | + | chr4_2:48395046-48395065 | Msa0603740:CDS | 40.0% | |
| GTTTATTCTACTGCTCTAGC+TGG | + | chr4_2:48395077-48395096 | Msa0603740:CDS | 40.0% | |
| !! | GTTGACAAGTAAGTTTTGGC+TGG | + | chr4_2:48395107-48395126 | Msa0603740:intron | 40.0% |
| AAAGTTGTTAACACGCCGTT+AGG | - | chr4_2:48395600-48395619 | None:intergenic | 40.0% | |
| ! | CGTGGCAATATTTTGTTAGG+AGG | - | chr4_2:48395672-48395691 | None:intergenic | 40.0% |
| TCCCATTCTCCACATCAATT+CGG | + | chr4_2:48395701-48395720 | Msa0603740:intron | 40.0% | |
| TCCGAATTGATGTGGAGAAT+GGG | - | chr4_2:48395705-48395724 | None:intergenic | 40.0% | |
| ATCCGAATTGATGTGGAGAA+TGG | - | chr4_2:48395706-48395725 | None:intergenic | 40.0% | |
| GGGATTTATCCGAATTGATG+TGG | - | chr4_2:48395713-48395732 | None:intergenic | 40.0% | |
| ! | GTAACTAGTCTGTGGTTGAT+AGG | + | chr4_2:48396166-48396185 | Msa0603740:intron | 40.0% |
| !!! | CTGTGGTTGATAGGTTTTCA+TGG | + | chr4_2:48396175-48396194 | Msa0603740:intron | 40.0% |
| CTAATCAGCTACTCACTTAG+GGG | - | chr4_2:48396284-48396303 | None:intergenic | 40.0% | |
| AAGGAGAGATCAAGAAGACT+TGG | + | chr4_2:48396357-48396376 | Msa0603740:CDS | 40.0% | |
| CAGGTATTTACACCATTCGA+CGG | + | chr4_2:48396477-48396496 | Msa0603740:intron | 40.0% | |
| ATTGGTATCAGCTACACAGT+AGG | + | chr4_2:48396972-48396991 | Msa0603740:CDS | 40.0% | |
| GTTTGTATCGGGAAAAGTGA+TGG | + | chr4_2:48397036-48397055 | Msa0603740:three_prime_UTR | 40.0% | |
| TTGAGTAGTCCCTGAAAAGA+CGG | - | chr4_2:48397062-48397081 | None:intergenic | 40.0% | |
| ! | TGTGGAGCTTTTACTAACCT+TGG | - | chr4_2:48397108-48397127 | None:intergenic | 40.0% |
| ATCCAACTTAACCATCTGAG+GGG | - | chr4_2:48397307-48397326 | None:intergenic | 40.0% | |
| ! | ACTGAGTTGAAGATTTGGCG+GGG | - | chr4_2:48389873-48389892 | None:intergenic | 45.0% |
| ! | GACTGAGTTGAAGATTTGGC+GGG | - | chr4_2:48389874-48389893 | None:intergenic | 45.0% |
| ! | GGACTGAGTTGAAGATTTGG+CGG | - | chr4_2:48389875-48389894 | None:intergenic | 45.0% |
| ATGTAGTAAGAGATGGGGGT+GGG | - | chr4_2:48389962-48389981 | None:intergenic | 45.0% | |
| GGTGATGTAGTAAGAGATGG+GGG | - | chr4_2:48389966-48389985 | None:intergenic | 45.0% | |
| GGGTGATGTAGTAAGAGATG+GGG | - | chr4_2:48389967-48389986 | None:intergenic | 45.0% | |
| GGGGTGATGTAGTAAGAGAT+GGG | - | chr4_2:48389968-48389987 | None:intergenic | 45.0% | |
| AGGGGTGATGTAGTAAGAGA+TGG | - | chr4_2:48389969-48389988 | None:intergenic | 45.0% | |
| ! | AAATGGGGGTTGGGGTTTTA+GGG | - | chr4_2:48389988-48390007 | None:intergenic | 45.0% |
| ! | AAAATGGGGGTTGGGGTTTT+AGG | - | chr4_2:48389989-48390008 | None:intergenic | 45.0% |
| AATTGAAGTGGGAAAGGGGA+GGG | - | chr4_2:48390026-48390045 | None:intergenic | 45.0% | |
| GCGAAGAATTGAAGTGGGAA+AGG | - | chr4_2:48390032-48390051 | None:intergenic | 45.0% | |
| ! | CGGGGAAGAGAGATGAATTT+TGG | - | chr4_2:48390067-48390086 | None:intergenic | 45.0% |
| ! | AATTCACCGGCACTGAACTT+CGG | - | chr4_2:48390115-48390134 | None:intergenic | 45.0% |
| CGATGACTTACCAGAGGAAT+TGG | + | chr4_2:48390156-48390175 | Msa0603740:CDS | 45.0% | |
| TCTCTTCGGTTTACTCCTCT+TGG | - | chr4_2:48390461-48390480 | None:intergenic | 45.0% | |
| ACAACTATGAAGCACGCACA+CGG | + | chr4_2:48390536-48390555 | Msa0603740:intron | 45.0% | |
| CGTGTCAATGAGTGTGTTTC+TGG | - | chr4_2:48390715-48390734 | None:intergenic | 45.0% | |
| GTAATCACATGCGTCAGTGT+TGG | + | chr4_2:48390775-48390794 | Msa0603740:intron | 45.0% | |
| TCCCTGACAATCTTCTACCA+AGG | + | chr4_2:48391020-48391039 | Msa0603740:CDS | 45.0% | |
| ATTGTTGGAAGACCGAACGT+TGG | + | chr4_2:48391049-48391068 | Msa0603740:CDS | 45.0% | |
| !! | AATGCTGACTTGCCAACGTT+CGG | - | chr4_2:48391064-48391083 | None:intergenic | 45.0% |
| GTAGGGAAACAAGGCAATTG+TGG | + | chr4_2:48391241-48391260 | Msa0603740:intron | 45.0% | |
| GTTACGAGGGACCGTTTATA+TGG | + | chr4_2:48391278-48391297 | Msa0603740:CDS | 45.0% | |
| GGGAGATCATGAATTCATGG+TGG | + | chr4_2:48391313-48391332 | Msa0603740:CDS | 45.0% | |
| AGTACAACCATCGGTATGGA+TGG | + | chr4_2:48391401-48391420 | Msa0603740:CDS | 45.0% | |
| !!! | CATTTTCCTGGTTGATGGTC+AGG | + | chr4_2:48391517-48391536 | Msa0603740:CDS | 45.0% |
| CAATTACCTGACCATCAACC+AGG | - | chr4_2:48391526-48391545 | None:intergenic | 45.0% | |
| GTGCACAACTGTGTTATCTG+TGG | - | chr4_2:48391778-48391797 | None:intergenic | 45.0% | |
| CTGATGTGGAGATTGCTGAT+TGG | + | chr4_2:48391935-48391954 | Msa0603740:CDS | 45.0% | |
| !! | GTGTCTGAATTTTGGTCCCT+CGG | + | chr4_2:48392036-48392055 | Msa0603740:CDS | 45.0% |
| !! | TGTCTGAATTTTGGTCCCTC+GGG | + | chr4_2:48392037-48392056 | Msa0603740:CDS | 45.0% |
| CACTGATAAAGCTTACCCGA+GGG | - | chr4_2:48392055-48392074 | None:intergenic | 45.0% | |
| CAAACAATTCACGCCAGTTG+AGG | - | chr4_2:48392264-48392283 | None:intergenic | 45.0% | |
| GGCGTGAATTGTTTGCGTAT+CGG | + | chr4_2:48392269-48392288 | Msa0603740:intron | 45.0% | |
| TTGACCGTCGATGTCAAAGA+TGG | + | chr4_2:48392298-48392317 | Msa0603740:intron | 45.0% | |
| TCTGTAACCCCGAACAAACA+AGG | - | chr4_2:48393336-48393355 | None:intergenic | 45.0% | |
| TTCGGGGTTACAGAAAGTTG+AGG | + | chr4_2:48393342-48393361 | Msa0603740:CDS | 45.0% | |
| !! | TTTGAATGCACTGGTTGGTG+AGG | + | chr4_2:48393691-48393710 | Msa0603740:intron | 45.0% |
| AAGAAACAAACCTGGCCATC+TGG | - | chr4_2:48393782-48393801 | None:intergenic | 45.0% | |
| ! | GTGGTACTGAACCCAAAGAA+TGG | + | chr4_2:48393875-48393894 | Msa0603740:intron | 45.0% |
| CATTTCTTGGCAATGGCTCT+TGG | - | chr4_2:48394033-48394052 | None:intergenic | 45.0% | |
| TGATTTCGCACTCGACACTT+TGG | - | chr4_2:48394104-48394123 | None:intergenic | 45.0% | |
| GCCAGGATATCAGAGTTAAG+GGG | - | chr4_2:48394134-48394153 | None:intergenic | 45.0% | |
| CAGCCAGGATATCAGAGTTA+AGG | - | chr4_2:48394136-48394155 | None:intergenic | 45.0% | |
| !! | AATGCGGTGTCTTTAAGGTG+GGG | - | chr4_2:48394329-48394348 | None:intergenic | 45.0% |
| ! | TGTTTTCCCCATCCAAACGT+TGG | + | chr4_2:48394468-48394487 | Msa0603740:intron | 45.0% |
| AAACCACCAACGTTTGGATG+GGG | - | chr4_2:48394477-48394496 | None:intergenic | 45.0% | |
| AGCCTTAAACCACCAACGTT+TGG | - | chr4_2:48394483-48394502 | None:intergenic | 45.0% | |
| CTGTTCAGTGATACAAGCCA+TGG | - | chr4_2:48394742-48394761 | None:intergenic | 45.0% | |
| ! | CATGGCTTGTATCACTGAAC+AGG | + | chr4_2:48394740-48394759 | Msa0603740:CDS | 45.0% |
| TGAGCTCAAGAGCTCTACAT+TGG | + | chr4_2:48395492-48395511 | Msa0603740:intron | 45.0% | |
| !! | TAGGAGCATTAGCTCTGGTT+AGG | - | chr4_2:48395560-48395579 | None:intergenic | 45.0% |
| AGAATGGGATAGTAGTGACG+TGG | - | chr4_2:48395690-48395709 | None:intergenic | 45.0% | |
| TTGAGCCCCAGAAATGACAA+AGG | - | chr4_2:48396043-48396062 | None:intergenic | 45.0% | |
| ! | CTCCTTTTCGACTTCACTAG+CGG | - | chr4_2:48396343-48396362 | None:intergenic | 45.0% |
| ! | TAACTTTTAAGCCTCCTCCC+AGG | + | chr4_2:48396415-48396434 | Msa0603740:CDS | 45.0% |
| GCGTGTTTACTATTGCACTC+AGG | + | chr4_2:48396458-48396477 | Msa0603740:CDS | 45.0% | |
| GCTCAACTGAAGGAACTCAT+GGG | - | chr4_2:48396512-48396531 | None:intergenic | 45.0% | |
| AGCTCAACTGAAGGAACTCA+TGG | - | chr4_2:48396513-48396532 | None:intergenic | 45.0% | |
| ! | AAGAGCGTAAGCTCAACTGA+AGG | - | chr4_2:48396522-48396541 | None:intergenic | 45.0% |
| CTGCAAGAAGACATCTGGTA+AGG | - | chr4_2:48396593-48396612 | None:intergenic | 45.0% | |
| CTTACCAGATGTCTTCTTGC+AGG | + | chr4_2:48396591-48396610 | Msa0603740:intron | 45.0% | |
| TCTTCTTGCAGGCTGCTATA+AGG | + | chr4_2:48396602-48396621 | Msa0603740:intron | 45.0% | |
| !! | ATAAAGCGCCGGTAAGTTTC+AGG | - | chr4_2:48396670-48396689 | None:intergenic | 45.0% |
| TGAAACTTACCGGCGCTTTA+TGG | + | chr4_2:48396669-48396688 | Msa0603740:CDS | 45.0% | |
| CGTTCAAATGCGGGATTTCT+TGG | + | chr4_2:48396703-48396722 | Msa0603740:CDS | 45.0% | |
| GATTTCTTGGTACCCCCATT+CGG | + | chr4_2:48396716-48396735 | Msa0603740:CDS | 45.0% | |
| ! | ATCACTGGCAATAGTCTTGG+TGG | - | chr4_2:48396878-48396897 | None:intergenic | 45.0% |
| TGCATCACTGGCAATAGTCT+TGG | - | chr4_2:48396881-48396900 | None:intergenic | 45.0% | |
| TTCGTCACACCGTCGAAAAT+TGG | + | chr4_2:48396954-48396973 | Msa0603740:CDS | 45.0% | |
| ! | GGCTGTGGTTCTGTTTGTAT+CGG | + | chr4_2:48397024-48397043 | Msa0603740:three_prime_UTR | 45.0% |
| ! | GCTGTGGTTCTGTTTGTATC+GGG | + | chr4_2:48397025-48397044 | Msa0603740:three_prime_UTR | 45.0% |
| ! | AAAGTGATGGCCGTCTTTTC+AGG | + | chr4_2:48397049-48397068 | Msa0603740:three_prime_UTR | 45.0% |
| ! | AAGTGATGGCCGTCTTTTCA+GGG | + | chr4_2:48397050-48397069 | Msa0603740:three_prime_UTR | 45.0% |
| CTGCTCCCTGAAATTAACCA+AGG | + | chr4_2:48397088-48397107 | Msa0603740:three_prime_UTR | 45.0% | |
| !!! | TCTGTTTTTTCCCCCTCAGA+TGG | + | chr4_2:48397293-48397312 | Msa0603740:three_prime_UTR | 45.0% |
| TCCAACTTAACCATCTGAGG+GGG | - | chr4_2:48397306-48397325 | None:intergenic | 45.0% | |
| !! | AATATAATGAATATATAAAA+AGG | + | chr4_2:48391620-48391639 | Msa0603740:intron | 5.0% |
| !! | TTATATAATATATAATTACT+TGG | + | chr4_2:48396547-48396566 | Msa0603740:intron | 5.0% |
| TGTAGTAAGAGATGGGGGTG+GGG | - | chr4_2:48389961-48389980 | None:intergenic | 50.0% | |
| GATGTAGTAAGAGATGGGGG+TGG | - | chr4_2:48389963-48389982 | None:intergenic | 50.0% | |
| !! | AATGGGGGTTGGGGTTTTAG+GGG | - | chr4_2:48389987-48390006 | None:intergenic | 50.0% |
| GAATTGAAGTGGGAAAGGGG+AGG | - | chr4_2:48390027-48390046 | None:intergenic | 50.0% | |
| ! | ATTCACCGGCACTGAACTTC+GGG | - | chr4_2:48390114-48390133 | None:intergenic | 50.0% |
| !! | TTCAGTGCCGGTGAATTCTC+CGG | + | chr4_2:48390118-48390137 | Msa0603740:CDS | 50.0% |
| TAAGTCATCGTCGTCGATGG+TGG | - | chr4_2:48390146-48390165 | None:intergenic | 50.0% | |
| TGGTAAGTCATCGTCGTCGA+TGG | - | chr4_2:48390149-48390168 | None:intergenic | 50.0% | |
| AGAAGCAAAGGAAGTTGCGC+TGG | + | chr4_2:48390258-48390277 | Msa0603740:CDS | 50.0% | |
| GGGAAACAAGGCAATTGTGG+TGG | + | chr4_2:48391244-48391263 | Msa0603740:intron | 50.0% | |
| !! | GAATTCATGGTGGTGGACAC+TGG | + | chr4_2:48391323-48391342 | Msa0603740:CDS | 50.0% |
| GGGAATACCATCCATACCGA+TGG | - | chr4_2:48391411-48391430 | None:intergenic | 50.0% | |
| ! | TATTCCCCTTGCCTCTAGAG+AGG | + | chr4_2:48391424-48391443 | Msa0603740:CDS | 50.0% |
| CTCAATCATTGACGGCATCC+TGG | - | chr4_2:48391459-48391478 | None:intergenic | 50.0% | |
| AGGTCTAACAGCAGCTGATG+TGG | + | chr4_2:48391921-48391940 | Msa0603740:CDS | 50.0% | |
| CCACTGATAAAGCTTACCCG+AGG | - | chr4_2:48392056-48392075 | None:intergenic | 50.0% | |
| ! | CCTCGGGTAAGCTTTATCAG+TGG | + | chr4_2:48392053-48392072 | Msa0603740:intron | 50.0% |
| ! | CGGGTAAGCTTTATCAGTGG+AGG | + | chr4_2:48392056-48392075 | Msa0603740:intron | 50.0% |
| CAGTGGAGGATACATACTGG+AGG | + | chr4_2:48392070-48392089 | Msa0603740:intron | 50.0% | |
| GCTATATCAGGGACTGGAAC+TGG | + | chr4_2:48393298-48393317 | Msa0603740:CDS | 50.0% | |
| ACAATAGTCAGCCCCATCAG+TGG | + | chr4_2:48393719-48393738 | Msa0603740:intron | 50.0% | |
| ! | TCACGTGTAGTGCCACTGAT+GGG | - | chr4_2:48393734-48393753 | None:intergenic | 50.0% |
| ! | ATCACGTGTAGTGCCACTGA+TGG | - | chr4_2:48393735-48393754 | None:intergenic | 50.0% |
| ATTTACTGGACCAGATGGCC+AGG | + | chr4_2:48393769-48393788 | Msa0603740:intron | 50.0% | |
| GCCCCTTAACTCTGATATCC+TGG | + | chr4_2:48394130-48394149 | Msa0603740:intron | 50.0% | |
| AGCAGCACAAAAAGATCCCC+AGG | + | chr4_2:48394177-48394196 | Msa0603740:intron | 50.0% | |
| GGCATCAATGGTTATGCCTG+GGG | - | chr4_2:48394196-48394215 | None:intergenic | 50.0% | |
| GGGCATCAATGGTTATGCCT+GGG | - | chr4_2:48394197-48394216 | None:intergenic | 50.0% | |
| TTTCCCCATCCAAACGTTGG+TGG | + | chr4_2:48394471-48394490 | Msa0603740:intron | 50.0% | |
| CTCTGTTGTACTTCCAGCTG+AGG | - | chr4_2:48394652-48394671 | None:intergenic | 50.0% | |
| ! | CTCAGCTGGAAGTACAACAG+AGG | + | chr4_2:48394650-48394669 | Msa0603740:CDS | 50.0% |
| TGCTCTTGTCATTGAGGCCA+TGG | + | chr4_2:48394722-48394741 | Msa0603740:CDS | 50.0% | |
| !! | CTGGTTAGGAGCATTAGCTC+TGG | - | chr4_2:48395565-48395584 | None:intergenic | 50.0% |
| TGCCGCTAGTGAAGTCGAAA+AGG | + | chr4_2:48396338-48396357 | Msa0603740:CDS | 50.0% | |
| ! | CTTTTTCCACCTCGTGTCCT+GGG | - | chr4_2:48396435-48396454 | None:intergenic | 50.0% |
| ! | TCTTTTTCCACCTCGTGTCC+TGG | - | chr4_2:48396436-48396455 | None:intergenic | 50.0% |
| AGGACACGAGGTGGAAAAAG+AGG | + | chr4_2:48396435-48396454 | Msa0603740:CDS | 50.0% | |
| GGACACGAGGTGGAAAAAGA+GGG | + | chr4_2:48396436-48396455 | Msa0603740:CDS | 50.0% | |
| GAAGCAGCTGCGTTCAAATG+CGG | + | chr4_2:48396693-48396712 | Msa0603740:CDS | 50.0% | |
| AAGCAGCTGCGTTCAAATGC+GGG | + | chr4_2:48396694-48396713 | Msa0603740:CDS | 50.0% | |
| GTGGCGCAGCAGAAGAAAAA+TGG | + | chr4_2:48396744-48396763 | Msa0603740:CDS | 50.0% | |
| ! | ACTGGCAATAGTCTTGGTGG+AGG | - | chr4_2:48396875-48396894 | None:intergenic | 50.0% |
| ! | CATATAGAAGAGGCTGGCTG+TGG | + | chr4_2:48397009-48397028 | Msa0603740:three_prime_UTR | 50.0% |
| ACGAACGAGTGCCAGAAGTT+TGG | + | chr4_2:48397131-48397150 | Msa0603740:three_prime_UTR | 50.0% | |
| TCCCCCTCAGATGGTTAAGT+TGG | + | chr4_2:48397302-48397321 | Msa0603740:three_prime_UTR | 50.0% | |
| CAGTGGGAGAGAGATGCCAT+TGG | - | chr4_2:48389932-48389951 | None:intergenic | 55.0% | |
| ! | TTCACCGGCACTGAACTTCG+GGG | - | chr4_2:48390113-48390132 | None:intergenic | 55.0% |
| CGACGACGATGACTTACCAG+AGG | + | chr4_2:48390150-48390169 | Msa0603740:CDS | 55.0% | |
| ACGGACACCGAACATGACAC+TGG | + | chr4_2:48390555-48390574 | Msa0603740:intron | 55.0% | |
| !! | GCAATTGTGGTGGATGAGCC+TGG | + | chr4_2:48391254-48391273 | Msa0603740:CDS | 55.0% |
| TGGATGAGCCTGGAGTTACG+AGG | + | chr4_2:48391264-48391283 | Msa0603740:CDS | 55.0% | |
| GGATGAGCCTGGAGTTACGA+GGG | + | chr4_2:48391265-48391284 | Msa0603740:CDS | 55.0% | |
| AAACGGTCCCTCGTAACTCC+AGG | - | chr4_2:48391275-48391294 | None:intergenic | 55.0% | |
| !! | TTCATGGTGGTGGACACTGG+TGG | + | chr4_2:48391326-48391345 | Msa0603740:CDS | 55.0% |
| ! | AGCTGCCTCTCTAGAGGCAA+GGG | - | chr4_2:48391432-48391451 | None:intergenic | 55.0% |
| GAGACAAGCGATTGCAGCTG+TGG | + | chr4_2:48391478-48391497 | Msa0603740:CDS | 55.0% | |
| ! | TTACCGGTGGTTCTGCAGTC+CGG | + | chr4_2:48391692-48391711 | Msa0603740:intron | 55.0% |
| ! | CACGTGTAGTGCCACTGATG+GGG | - | chr4_2:48393733-48393752 | None:intergenic | 55.0% |
| ! | GGGGCATCAATGGTTATGCC+TGG | - | chr4_2:48394198-48394217 | None:intergenic | 55.0% |
| !! | CGGTGTCTTTAAGGTGGGGA+GGG | - | chr4_2:48394325-48394344 | None:intergenic | 55.0% |
| AGGACAACTGTAGCCTCAGC+TGG | + | chr4_2:48394636-48394655 | Msa0603740:CDS | 55.0% | |
| TGGGGCTCAAGTGATGCACA+TGG | + | chr4_2:48396053-48396072 | Msa0603740:intron | 55.0% | |
| GGGTAAGCACTACCGTCGAA+TGG | - | chr4_2:48396492-48396511 | None:intergenic | 55.0% | |
| GCAGCCTGCAAGAAGACATC+TGG | - | chr4_2:48396598-48396617 | None:intergenic | 55.0% | |
| GCTGCTTCTCCATAAAGCGC+CGG | - | chr4_2:48396681-48396700 | None:intergenic | 55.0% | |
| ! | GTACCCCCATTCGGCTTTTG+TGG | + | chr4_2:48396725-48396744 | Msa0603740:CDS | 55.0% |
| TGCGCCACAAAAGCCGAATG+GGG | - | chr4_2:48396732-48396751 | None:intergenic | 55.0% | |
| CTGCGCCACAAAAGCCGAAT+GGG | - | chr4_2:48396733-48396752 | None:intergenic | 55.0% | |
| CTGGCACTCGTTCGTACTTG+TGG | - | chr4_2:48397126-48397145 | None:intergenic | 55.0% | |
| ACTGAACTTCGGGGTGGAGC+GGG | - | chr4_2:48390104-48390123 | None:intergenic | 60.0% | |
| CACTGAACTTCGGGGTGGAG+CGG | - | chr4_2:48390105-48390124 | None:intergenic | 60.0% | |
| TCCACCCCGAAGTTCAGTGC+CGG | + | chr4_2:48390106-48390125 | Msa0603740:CDS | 60.0% | |
| ! | GGTGGTGCCGGAGAATTCAC+CGG | - | chr4_2:48390128-48390147 | None:intergenic | 60.0% |
| ! | ATCGTCGTCGATGGTGGTGC+CGG | - | chr4_2:48390140-48390159 | None:intergenic | 60.0% |
| TGCGCTCGAGCGAGAAGCAA+AGG | + | chr4_2:48390246-48390265 | Msa0603740:CDS | 60.0% | |
| ! | GCTGCCTCTCTAGAGGCAAG+GGG | - | chr4_2:48391431-48391450 | None:intergenic | 60.0% |
| ! | CAGCTGCCTCTCTAGAGGCA+AGG | - | chr4_2:48391433-48391452 | None:intergenic | 60.0% |
| GGCAACAGCTGCCTCTCTAG+AGG | - | chr4_2:48391438-48391457 | None:intergenic | 60.0% | |
| CTAGAGAGGCAGCTGTTGCC+AGG | + | chr4_2:48391438-48391457 | Msa0603740:CDS | 60.0% | |
| !! | GCGGTGTCTTTAAGGTGGGG+AGG | - | chr4_2:48394326-48394345 | None:intergenic | 60.0% |
| GGCGACACCCTACTTTCCAG+AGG | + | chr4_2:48395953-48395972 | Msa0603740:intron | 60.0% | |
| TTTCCACCTCGTGTCCTGGG+AGG | - | chr4_2:48396432-48396451 | None:intergenic | 60.0% | |
| GCGCCACAAAAGCCGAATGG+GGG | - | chr4_2:48396731-48396750 | None:intergenic | 60.0% | |
| GCTGCGCCACAAAAGCCGAA+TGG | - | chr4_2:48396734-48396753 | None:intergenic | 60.0% | |
| GGGGGTGGGGAAGTGACAGT+GGG | - | chr4_2:48389948-48389967 | None:intergenic | 65.0% | |
| TGGGGGTGGGGAAGTGACAG+TGG | - | chr4_2:48389949-48389968 | None:intergenic | 65.0% | |
| ! | ACCGGCACTGAACTTCGGGG+TGG | - | chr4_2:48390110-48390129 | None:intergenic | 65.0% |
| CAGCCGGACTGCAGAACCAC+CGG | - | chr4_2:48391698-48391717 | None:intergenic | 65.0% | |
| TCCTTCGACTCCCTCACCCC+CGG | + | chr4_2:48394279-48394298 | Msa0603740:intron | 65.0% | |
| ! | ACCACCATGCCCTTGGTGGC+CGG | - | chr4_2:48394301-48394320 | None:intergenic | 65.0% |
| GGGAACCACCATGCCCTTGG+TGG | - | chr4_2:48394305-48394324 | None:intergenic | 65.0% | |
| GGAGGGAACCACCATGCCCT+TGG | - | chr4_2:48394308-48394327 | None:intergenic | 65.0% | |
| AAGCCTCCTCCCAGGACACG+AGG | + | chr4_2:48396423-48396442 | Msa0603740:CDS | 65.0% | |
| ACTTCGGGGTGGAGCGGGAG+AGG | - | chr4_2:48390099-48390118 | None:intergenic | 70.0% | |
| ! | ACCATGCCCTTGGTGGCCGG+GGG | - | chr4_2:48394298-48394317 | None:intergenic | 70.0% |
| ! | CACCATGCCCTTGGTGGCCG+GGG | - | chr4_2:48394299-48394318 | None:intergenic | 70.0% |
| ! | CCACCATGCCCTTGGTGGCC+GGG | - | chr4_2:48394300-48394319 | None:intergenic | 70.0% |
| CCACCTCGTGTCCTGGGAGG+AGG | - | chr4_2:48396429-48396448 | None:intergenic | 70.0% | |
| CCTCCTCCCAGGACACGAGG+TGG | + | chr4_2:48396426-48396445 | Msa0603740:CDS | 70.0% | |
| AGCGGGAGAGGCGGCGACAG+CGG | - | chr4_2:48390087-48390106 | None:intergenic | 75.0% | |
| TCGGGGTGGAGCGGGAGAGG+CGG | - | chr4_2:48390096-48390115 | None:intergenic | 75.0% | |
| GCCGGGGGTGAGGGAGTCGA+AGG | - | chr4_2:48394283-48394302 | None:intergenic | 75.0% | |
| TCCCTCACCCCCGGCCACCA+AGG | + | chr4_2:48394288-48394307 | Msa0603740:intron | 75.0% | |
| ! | CCCTTGGTGGCCGGGGGTGA+GGG | - | chr4_2:48394292-48394311 | None:intergenic | 75.0% |
| CCCTCACCCCCGGCCACCAA+GGG | + | chr4_2:48394289-48394308 | Msa0603740:intron | 75.0% | |
| ACCCCCGGCCACCAAGGGCA+TGG | + | chr4_2:48394294-48394313 | Msa0603740:intron | 75.0% | |
| ! | CCCGGCCACCAAGGGCATGG+TGG | + | chr4_2:48394297-48394316 | Msa0603740:intron | 75.0% |
| ! | CGGGAGAGGCGGCGACAGCG+GGG | - | chr4_2:48390085-48390104 | None:intergenic | 80.0% |
| ! | GCGGGAGAGGCGGCGACAGC+GGG | - | chr4_2:48390086-48390105 | None:intergenic | 80.0% |
| !! | GCCCTTGGTGGCCGGGGGTG+AGG | - | chr4_2:48394293-48394312 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 48389843 | 48397456 | 48389843 | ID=Msa0603740;Name=Msa0603740 |
| chr4_2 | mRNA | 48389843 | 48397456 | 48389843 | ID=Msa0603740-mRNA-1;Parent=Msa0603740;Name=Msa0603740-mRNA-1;_AED=0.15;_eAED=0.15;_QI=89|0.72|0.83|1|0.81|0.91|12|463|617 |
| chr4_2 | exon | 48389843 | 48390316 | 48389843 | ID=Msa0603740-mRNA-1:exon:11176;Parent=Msa0603740-mRNA-1 |
| chr4_2 | exon | 48390370 | 48390392 | 48390370 | ID=Msa0603740-mRNA-1:exon:11177;Parent=Msa0603740-mRNA-1 |
| chr4_2 | exon | 48391019 | 48391102 | 48391019 | ID=Msa0603740-mRNA-1:exon:11178;Parent=Msa0603740-mRNA-1 |
| chr4_2 | exon | 48391245 | 48391538 | 48391245 | ID=Msa0603740-mRNA-1:exon:11179;Parent=Msa0603740-mRNA-1 |
| chr4_2 | exon | 48391919 | 48392058 | 48391919 | ID=Msa0603740-mRNA-1:exon:11180;Parent=Msa0603740-mRNA-1 |
| chr4_2 | exon | 48393276 | 48393363 | 48393276 | ID=Msa0603740-mRNA-1:exon:11181;Parent=Msa0603740-mRNA-1 |
| chr4_2 | exon | 48393608 | 48393703 | 48393608 | ID=Msa0603740-mRNA-1:exon:11182;Parent=Msa0603740-mRNA-1 |
| chr4_2 | exon | 48394600 | 48394761 | 48394600 | ID=Msa0603740-mRNA-1:exon:11183;Parent=Msa0603740-mRNA-1 |
| chr4_2 | exon | 48394921 | 48395114 | 48394921 | ID=Msa0603740-mRNA-1:exon:11184;Parent=Msa0603740-mRNA-1 |
| chr4_2 | exon | 48396329 | 48396479 | 48396329 | ID=Msa0603740-mRNA-1:exon:11185;Parent=Msa0603740-mRNA-1 |
| chr4_2 | exon | 48396613 | 48396778 | 48396613 | ID=Msa0603740-mRNA-1:exon:11186;Parent=Msa0603740-mRNA-1 |
| chr4_2 | exon | 48396923 | 48397456 | 48396923 | ID=Msa0603740-mRNA-1:exon:11187;Parent=Msa0603740-mRNA-1 |
| chr4_2 | five_prime_UTR | 48389843 | 48389931 | 48389843 | ID=Msa0603740-mRNA-1:five_prime_utr;Parent=Msa0603740-mRNA-1 |
| chr4_2 | CDS | 48389932 | 48390316 | 48389932 | ID=Msa0603740-mRNA-1:cds;Parent=Msa0603740-mRNA-1 |
| chr4_2 | CDS | 48390370 | 48390392 | 48390370 | ID=Msa0603740-mRNA-1:cds;Parent=Msa0603740-mRNA-1 |
| chr4_2 | CDS | 48391019 | 48391102 | 48391019 | ID=Msa0603740-mRNA-1:cds;Parent=Msa0603740-mRNA-1 |
| chr4_2 | CDS | 48391245 | 48391538 | 48391245 | ID=Msa0603740-mRNA-1:cds;Parent=Msa0603740-mRNA-1 |
| chr4_2 | CDS | 48391919 | 48392058 | 48391919 | ID=Msa0603740-mRNA-1:cds;Parent=Msa0603740-mRNA-1 |
| chr4_2 | CDS | 48393276 | 48393363 | 48393276 | ID=Msa0603740-mRNA-1:cds;Parent=Msa0603740-mRNA-1 |
| chr4_2 | CDS | 48393608 | 48393703 | 48393608 | ID=Msa0603740-mRNA-1:cds;Parent=Msa0603740-mRNA-1 |
| chr4_2 | CDS | 48394600 | 48394761 | 48394600 | ID=Msa0603740-mRNA-1:cds;Parent=Msa0603740-mRNA-1 |
| chr4_2 | CDS | 48394921 | 48395114 | 48394921 | ID=Msa0603740-mRNA-1:cds;Parent=Msa0603740-mRNA-1 |
| chr4_2 | CDS | 48396329 | 48396479 | 48396329 | ID=Msa0603740-mRNA-1:cds;Parent=Msa0603740-mRNA-1 |
| chr4_2 | CDS | 48396613 | 48396778 | 48396613 | ID=Msa0603740-mRNA-1:cds;Parent=Msa0603740-mRNA-1 |
| chr4_2 | CDS | 48396923 | 48396993 | 48396923 | ID=Msa0603740-mRNA-1:cds;Parent=Msa0603740-mRNA-1 |
| chr4_2 | three_prime_UTR | 48396994 | 48397456 | 48396994 | ID=Msa0603740-mRNA-1:three_prime_utr;Parent=Msa0603740-mRNA-1 |
| Gene Sequence |
| Protein sequence |
