AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0695800

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0695800 MtrunA17_Chr4g0047451 94.781 479 25 0 1 479 1 479 0.0 947
Msa0695800 MtrunA17_Chr4g0047451 93.590 156 10 0 479 634 654 809 2.01e-88 295
Msa0695800 MtrunA17_Chr5g0428751 30.526 475 268 17 33 479 43 483 5.75e-40 156
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0695800 AT1G65070.3 53.728 456 162 6 28 479 40 450 4.33e-149 446
Msa0695800 AT1G65070.4 53.728 456 162 6 28 479 40 450 3.18e-147 448
Msa0695800 AT1G65070.4 42.945 163 90 2 478 639 624 784 7.25e-33 135
Msa0695800 AT1G65070.2 53.728 456 162 6 28 479 40 450 7.17e-147 448
Msa0695800 AT1G65070.2 42.945 163 90 2 478 639 624 784 7.97e-33 135
Msa0695800 AT1G65070.1 53.728 456 162 6 28 479 40 450 1.19e-146 447
Msa0695800 AT1G65070.1 42.604 169 88 3 478 639 624 790 2.34e-32 134
Msa0695800 AT5G54090.1 29.193 483 292 15 20 479 34 489 8.31e-36 144

Find 325 sgRNAs with CRISPR-Local

Find 505 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCATAATTCATTGGACTTTC+TGG 0.056329 4_4:+65490448 None:intergenic
CATTGTTCTATCATGTAATT+TGG 0.089876 4_4:-65491034 Msa0695800:three_prime_UTR
TTCATATAAATAAAAGTTAT+TGG 0.136483 4_4:-65491295 Msa0695800:three_prime_UTR
ATCAATCGAGTGACTAATTT+TGG 0.146698 4_4:-65490305 Msa0695800:three_prime_UTR
AAATACCTTTCAATAAAATT+TGG 0.146933 4_4:+65491262 None:intergenic
AATTTAGAATTGATATATTT+TGG 0.148133 4_4:-65491195 Msa0695800:three_prime_UTR
CTAACATCATATTTGGAAAT+TGG 0.160554 4_4:-65490973 Msa0695800:three_prime_UTR
CAGCTTCCTAACATCATATT+TGG 0.163727 4_4:-65490980 Msa0695800:three_prime_UTR
TCTGCTTGCTTATTCTTTAC+AGG 0.179462 4_4:-65490331 Msa0695800:three_prime_UTR
TTGCAAAATAACTTTCTTAA+TGG 0.199544 4_4:+65491480 None:intergenic
CTCTGGAGCAACATACTTTA+TGG 0.200265 4_4:-65493834 Msa0695800:CDS
ATTCAATGTGCCTATATTAT+AGG 0.218264 4_4:+65490937 None:intergenic
ACACTTGTTGGTATAATTAA+AGG 0.234769 4_4:-65490257 Msa0695800:three_prime_UTR
GCAAAATTGTAATTTCCTAA+TGG 0.255352 4_4:-65494125 Msa0695800:CDS
CGAAAAGCAACTAAAAGATT+TGG 0.258652 4_4:-65491916 Msa0695800:CDS
ATATACCCATTCAATTTCTT+TGG 0.258891 4_4:-65489931 Msa0695800:three_prime_UTR
ATTATCTAAAATATTCTTCA+TGG 0.259873 4_4:-65491326 Msa0695800:three_prime_UTR
CTTTGCTAGTAATTAGTTAC+TGG 0.262149 4_4:-65489322 Msa0695800:three_prime_UTR
ACATCATATACTCCACAATT+TGG 0.262844 4_4:-65491783 Msa0695800:CDS
TTACATACTCCCTCCGCTAT+TGG 0.269646 4_4:+65491142 None:intergenic
CCAGAAAGTCCAATGAATTA+TGG 0.282003 4_4:-65490448 Msa0695800:three_prime_UTR
ATCTGATTTGGGCTATTAAT+AGG 0.289526 4_4:+65490043 None:intergenic
GAAGAACACTCGCTGCTTCC+AGG 0.290821 4_4:-65495040 Msa0695800:CDS
TTGCATAGATTGCAATCTTT+TGG 0.292449 4_4:-65494080 Msa0695800:CDS
CTAGAATGTGCGTGGGCATC+AGG 0.296994 4_4:-65493907 Msa0695800:CDS
AGAGTACCTAAACTGAAAAT+TGG 0.301495 4_4:+65493608 None:intergenic
CAGCAGCTTGGACCTGCTTT+TGG 0.304897 4_4:-65490366 Msa0695800:three_prime_UTR
ACAACCTTCTGTTGTGGATT+GGG 0.306479 4_4:+65495479 None:intergenic
ATTCTCTCCGTTGCTGTTTC+CGG 0.310263 4_4:-65495098 Msa0695800:CDS
GTAATAGTGGGAATCTGATT+TGG 0.311339 4_4:+65490031 None:intergenic
AGCAATGGTAATATTTATTA+TGG 0.311747 4_4:-65490670 Msa0695800:three_prime_UTR
GACCTTATCCTTGCAGATAT+TGG 0.312231 4_4:-65493197 Msa0695800:CDS
CAAAATTGTAATTTCCTAAT+GGG 0.314744 4_4:-65494124 Msa0695800:CDS
TTGCATCCTCTAACTCTTGT+TGG 0.316694 4_4:+65491970 None:intergenic
TTCAAATCTATTGCTTCTTT+CGG 0.318025 4_4:+65493809 None:intergenic
CTCTGCCACGGGCTCGCACT+TGG 0.318413 4_4:+65489594 None:intergenic
AGGTCAAACCAAGGAAGTTT+TGG 0.325111 4_4:+65493215 None:intergenic
TCATTAGATCAGAACGAAAA+AGG 0.327607 4_4:-65494024 Msa0695800:CDS
CTTGGCAGGCAGATGCATTC+CGG 0.328681 4_4:+65493244 None:intergenic
AGGTTTGATCGAGAAGCTTT+TGG 0.334460 4_4:+65495183 None:intergenic
AGGGATTGAGGGTTTGTTGA+TGG 0.339868 4_4:+65495388 None:intergenic
TGCTGTTAGCTTATTGCAAT+AGG 0.342564 4_4:+65490384 None:intergenic
TTCTTAGATGTTTGCACCGC+TGG 0.347990 4_4:+65490646 None:intergenic
TCCTTGCAATACGCGGCCTT+TGG 0.350706 4_4:+65489499 None:intergenic
TACAACCTTCTGTTGTGGAT+TGG 0.351481 4_4:+65495478 None:intergenic
GATCGACGCTTAGTAATAAA+TGG 0.355822 4_4:+65493929 None:intergenic
CAATTTCCAAATATGATGTT+AGG 0.363396 4_4:+65490974 None:intergenic
GGGATTGAGGGTTTGTTGAT+GGG 0.370731 4_4:+65495389 None:intergenic
GAAAAGCAACTAAAAGATTT+GGG 0.371137 4_4:-65491915 Msa0695800:CDS
AGCATTCACTTCCACTTCAA+TGG 0.372505 4_4:-65495261 Msa0695800:CDS
ATCAGAGATAAAATATTTGT+TGG 0.373046 4_4:-65493699 Msa0695800:CDS
AAGGAGAAGCGAGGGATTGA+GGG 0.374390 4_4:+65495377 None:intergenic
ACGGGCGTTGTTGGCGGCGG+AGG 0.376941 4_4:+65495235 None:intergenic
GATGCCCGGCCTGAGCTCAT+TGG 0.380731 4_4:+65489792 None:intergenic
TCTGAGTTGGGTAATGGAAA+TGG 0.381561 4_4:-65493431 Msa0695800:CDS
GAGTACGTCCGACGGGTAAA+CGG 0.383430 4_4:+65495216 None:intergenic
ATTACAAAGAGAACTGAATA+TGG 0.386756 4_4:+65490550 None:intergenic
AACTAGTTCTCCCACTCATC+AGG 0.387558 4_4:-65491604 Msa0695800:CDS
CAAGGTCTTCTGCCTCCCTT+TGG 0.387704 4_4:+65492036 None:intergenic
GTTCTGAATGCCAGCAGCTC+TGG 0.388227 4_4:-65493851 Msa0695800:CDS
GTAATACATGGGATGGGCAC+TGG 0.389103 4_4:-65490532 Msa0695800:three_prime_UTR
TTGTAATTTCCTAATGGGCT+TGG 0.389277 4_4:-65494119 Msa0695800:CDS
GAAACAATCTTGGTACAGTA+TGG 0.389406 4_4:-65491693 Msa0695800:CDS
AAGTACAATGCATCGATTAT+TGG 0.396471 4_4:-65489475 Msa0695800:three_prime_UTR
AATTCTTCTGAGTTGGGTAA+TGG 0.397648 4_4:-65493437 Msa0695800:CDS
TCCTAATGGGCTTGGAGCGC+AGG 0.398236 4_4:-65494111 Msa0695800:CDS
ATCTCCCTAAGCTAAAAGTT+TGG 0.402641 4_4:+65490117 None:intergenic
GAAGGAGAAGCGAGGGATTG+AGG 0.404110 4_4:+65495376 None:intergenic
GGCCTAATCGTACCTGTCTT+TGG 0.406122 4_4:-65489431 Msa0695800:three_prime_UTR
TGGTATTTATTACAGAAAAC+AGG 0.406389 4_4:+65491001 None:intergenic
TCTGTACACTAACGCTTTGA+AGG 0.408513 4_4:-65490799 Msa0695800:three_prime_UTR
CAAGTCCGTGTGAAGGGATT+GGG 0.412733 4_4:-65491756 Msa0695800:CDS
GACGGGTAAACGGGCGTTGT+TGG 0.416611 4_4:+65495226 None:intergenic
GTCATCTCAGGACCTAATAC+TGG 0.416951 4_4:-65493320 Msa0695800:CDS
ATTGTTCTATCATGTAATTT+GGG 0.417117 4_4:-65491033 Msa0695800:three_prime_UTR
GCTGTTAGCTTATTGCAATA+GGG 0.420312 4_4:+65490385 None:intergenic
GTTGACTTCAAAATTAGATC+TGG 0.420665 4_4:-65493356 Msa0695800:CDS
TATGGCAAAGGAAGCTCAAC+AGG 0.420669 4_4:-65491994 Msa0695800:CDS
GGGAGATCATAACAGAGAAT+AGG 0.421502 4_4:-65490101 Msa0695800:three_prime_UTR
TGTCTTTGGTGCATACTGAT+AGG 0.425729 4_4:-65489417 Msa0695800:three_prime_UTR
TGCTCCAATGAGCTCAGGCC+GGG 0.426132 4_4:-65489796 Msa0695800:three_prime_UTR
TAGAGACCAAAGAAATTGAA+TGG 0.427619 4_4:+65489925 None:intergenic
TCAGTTCTCTTTGTAATACA+TGG 0.427691 4_4:-65490544 Msa0695800:three_prime_UTR
ATTTGAACAACATGGAAGTT+AGG 0.428354 4_4:-65493793 Msa0695800:CDS
GGCAGAGCAGACTGTGGCTT+CGG 0.429255 4_4:-65489578 Msa0695800:three_prime_UTR
TAATAGTGGGAATCTGATTT+GGG 0.431781 4_4:+65490032 None:intergenic
ACTAGAGTGGTGGTCATCTC+AGG 0.432380 4_4:-65493332 Msa0695800:CDS
TAATACATGGGATGGGCACT+GGG 0.432402 4_4:-65490531 Msa0695800:three_prime_UTR
GTCTGGAAATTCTTCTGAGT+TGG 0.433211 4_4:-65493444 Msa0695800:CDS
GTAGCAGAAGCAAGGTTTGA+AGG 0.434423 4_4:+65495358 None:intergenic
GGAGATCATAACAGAGAATA+GGG 0.434447 4_4:-65490100 Msa0695800:three_prime_UTR
ACAGGTCCAACAAGAGTTAG+AGG 0.437103 4_4:-65491976 Msa0695800:CDS
CTTCGAACGGTGCAAAGCTC+GGG 0.437748 4_4:+65495059 None:intergenic
GCATTCAGAACTATACCTTC+TGG 0.438902 4_4:+65493863 None:intergenic
TCCTGCGCTCCAAGCCCATT+AGG 0.439036 4_4:+65494110 None:intergenic
TCTGGAAATTCTTCTGAGTT+GGG 0.439306 4_4:-65493443 Msa0695800:CDS
GCCTATGCTCAATGGATGAA+TGG 0.441853 4_4:-65493638 Msa0695800:CDS
AATCAAGACCACCACTGTGC+TGG 0.442307 4_4:-65489676 Msa0695800:three_prime_UTR
GCAAGTCCGTGTGAAGGGAT+TGG 0.444020 4_4:-65491757 Msa0695800:CDS
TGAGTGGGAGAACTAGTTGC+AGG 0.444981 4_4:+65491609 None:intergenic
TTCAGATCATCCTATAATAT+AGG 0.446831 4_4:-65490947 Msa0695800:three_prime_UTR
CTCCAATATCTGCAAGGATA+AGG 0.447195 4_4:+65493195 None:intergenic
TGCTGAGAGTTGCTTGCATA+TGG 0.449310 4_4:+65495280 None:intergenic
TTTGCACCTGCCAATCTGTT+GGG 0.450821 4_4:-65490843 Msa0695800:three_prime_UTR
CCTATGCTCAATGGATGAAT+GGG 0.451608 4_4:-65493637 Msa0695800:CDS
ACAGTACATCCATAATTCAT+TGG 0.451719 4_4:+65490439 None:intergenic
GTAATCTTATCTAGTGAGTT+GGG 0.452808 4_4:-65491454 Msa0695800:three_prime_UTR
GAGCTCATTGGAGCACTCCT+TGG 0.453654 4_4:+65489804 None:intergenic
AGAAAAGTCCAAAACTTCCT+TGG 0.454680 4_4:-65493223 Msa0695800:CDS
ACCACCACTGTGCTGGGCAC+AGG 0.455798 4_4:-65489669 Msa0695800:three_prime_UTR
CGTAGGCACCGTCTCTGAAA+TGG 0.456825 4_4:-65489632 Msa0695800:three_prime_UTR
GCATTCACTTCCACTTCAAT+GGG 0.457389 4_4:-65495260 Msa0695800:CDS
AGCACAGTGGTGGTCTTGAT+TGG 0.457759 4_4:+65489678 None:intergenic
AATCCTGGACTCTTTATTGA+AGG 0.459366 4_4:-65493993 Msa0695800:CDS
TAGACGTGAAACGATGCTTA+TGG 0.459950 4_4:-65492012 Msa0695800:CDS
CTTTAATTATTGAATTGAGT+TGG 0.464631 4_4:+65491886 None:intergenic
TTCAAACTCTGAAGCGGCCG+AGG 0.466077 4_4:-65493768 Msa0695800:CDS
CAAATATGATGTTAGGAAGC+TGG 0.466202 4_4:+65490981 None:intergenic
TTCAATGAAAACGTTGGGCC+TGG 0.468162 4_4:-65493285 Msa0695800:CDS
CTTATTGCAATAGGGGAATG+AGG 0.468243 4_4:+65490393 None:intergenic
ACATACGTAAACACACTTGT+TGG 0.471238 4_4:-65490269 Msa0695800:three_prime_UTR
AGCCACAGTCTGCTCTGCCA+CGG 0.473871 4_4:+65489582 None:intergenic
GGATTGAGGGTTTGTTGATG+GGG 0.474954 4_4:+65495390 None:intergenic
GCAGGATTCTTTGCACTTGG+TGG 0.477236 4_4:+65491627 None:intergenic
CCCTGTGCCCAGCACAGTGG+TGG 0.477450 4_4:+65489668 None:intergenic
AGTACGTCCGACGGGTAAAC+GGG 0.478043 4_4:+65495217 None:intergenic
GTATGTTGCTCCAGAGCTGC+TGG 0.478675 4_4:+65493841 None:intergenic
GCCACAGTGGTAGAATTGCC+TGG 0.478854 4_4:-65491723 Msa0695800:CDS
GGGTAAACGGGCGTTGTTGG+CGG 0.478868 4_4:+65495229 None:intergenic
CAATGACATTGCGGTCGTGC+AGG 0.479424 4_4:-65493558 Msa0695800:CDS
AGGGGTTGAGAGGGAGAGAC+CGG 0.480028 4_4:-65491111 Msa0695800:three_prime_UTR
TAAACGGGCGTTGTTGGCGG+CGG 0.480719 4_4:+65495232 None:intergenic
CCACCACTGTGCTGGGCACA+GGG 0.482069 4_4:-65489668 Msa0695800:three_prime_UTR
ACGGTGCCTACGTTGGCAAC+GGG 0.482091 4_4:+65489643 None:intergenic
AGAGGATGCAAAATCTCAAA+TGG 0.483805 4_4:-65491958 Msa0695800:CDS
ATTTGCACCTGCCAATCTGT+TGG 0.488077 4_4:-65490844 Msa0695800:three_prime_UTR
AGTAATCTTATCTAGTGAGT+TGG 0.488335 4_4:-65491455 Msa0695800:three_prime_UTR
GCCACAGTCTGCTCTGCCAC+GGG 0.492659 4_4:+65489583 None:intergenic
AAAATACCCTCGCCAAAAGC+AGG 0.494149 4_4:+65490354 None:intergenic
GATAATGTCACACTAAGGTC+TGG 0.494415 4_4:-65493461 Msa0695800:CDS
ACTGCTTCAATGAAAACGTT+GGG 0.494465 4_4:-65493290 Msa0695800:CDS
TCTAGTGAGTTGGGAACGGT+TGG 0.494542 4_4:-65491445 Msa0695800:three_prime_UTR
CAAGAGCTGCCTATGCTCAA+TGG 0.496220 4_4:-65493646 Msa0695800:CDS
TCTTCGAACGGTGCAAAGCT+CGG 0.496479 4_4:+65495058 None:intergenic
GGAGAATGCAGTTGCGCCAA+AGG 0.496923 4_4:-65489515 Msa0695800:three_prime_UTR
CGCTGATTGCCATCTCAAGA+TGG 0.497377 4_4:+65490581 None:intergenic
TTCAGTTTAGGTACTCTTGG+AGG 0.498097 4_4:-65493602 Msa0695800:CDS
TTTGCAGGGTGAAAAGATCA+AGG 0.499744 4_4:-65489876 Msa0695800:three_prime_UTR
GTTGCAGGATTCTTTGCACT+TGG 0.499764 4_4:+65491624 None:intergenic
GATGGGGATGAAGAGGTTGC+AGG 0.501851 4_4:+65495406 None:intergenic
CTATTGTAGAAACCACTGAA+TGG 0.501864 4_4:-65490724 Msa0695800:three_prime_UTR
ATGCGGTTCAACGCCGTCTA+CGG 0.502292 4_4:-65489832 Msa0695800:three_prime_UTR
GTTTGATAGTTTGAAACACT+TGG 0.502558 4_4:-65495012 Msa0695800:CDS
CGATTTAACAGTAAATATTG+AGG 0.507073 4_4:-65493531 Msa0695800:CDS
ATCAAGACCACCACTGTGCT+GGG 0.507288 4_4:-65489675 Msa0695800:three_prime_UTR
GATTGGTATCGGTGTGGCGG+AGG 0.508465 4_4:+65489695 None:intergenic
ACCTGCTTTCCCTGATGAGT+GGG 0.510949 4_4:+65491594 None:intergenic
CACCAAAGACAGGTACGATT+AGG 0.511658 4_4:+65489429 None:intergenic
AATAGCTAGAGGGGTTGAGA+GGG 0.511988 4_4:-65491120 Msa0695800:three_prime_UTR
TCTCTTTGTAATACATGGGA+TGG 0.512107 4_4:-65490539 Msa0695800:three_prime_UTR
TATGCGGCATCCATTACTCC+TGG 0.512692 4_4:-65493507 Msa0695800:CDS
GAACAAGGTGGAACTTATCA+TGG 0.516489 4_4:+65489728 None:intergenic
ACCACTGAATGGAAAATCCC+GGG 0.517125 4_4:-65490713 Msa0695800:three_prime_UTR
CTGTTAGCTTATTGCAATAG+GGG 0.520724 4_4:+65490386 None:intergenic
GGAGTATGTAAATAGCTAGA+GGG 0.523654 4_4:-65491130 Msa0695800:three_prime_UTR
ATGCGATCAGCGCCACTGAT+GGG 0.523837 4_4:+65491807 None:intergenic
AGGAGTGCTCCAATGAGCTC+AGG 0.524655 4_4:-65489801 Msa0695800:three_prime_UTR
GAAACTGTCAAGAGCGTGGT+GGG 0.524926 4_4:-65489757 Msa0695800:three_prime_UTR
GCATCGTTTCACGTCTATCA+AGG 0.526470 4_4:+65492018 None:intergenic
CCACAGTGGTAGAATTGCCT+GGG 0.526487 4_4:-65491722 Msa0695800:CDS
CAAACTATCAAACAATTCCC+TGG 0.528874 4_4:+65495022 None:intergenic
TCCCACTCATCAGGGAAAGC+AGG 0.529174 4_4:-65491595 Msa0695800:CDS
TGTGGCTTCGGCGTGGCAGA+AGG 0.530744 4_4:-65489566 Msa0695800:three_prime_UTR
GTTCTGATCTAATGATCTCC+AGG 0.531958 4_4:+65494032 None:intergenic
ACTCAAAATTGCTCTTTCCT+CGG 0.533024 4_4:+65493751 None:intergenic
TTAATATAGTTAACCTGTCA+AGG 0.533274 4_4:-65491527 Msa0695800:three_prime_UTR
TTCTCATTCACACACACCTC+CGG 0.533284 4_4:-65489983 Msa0695800:three_prime_UTR
GTGCTCCAATGAGCTCAGGC+CGG 0.534332 4_4:-65489797 Msa0695800:three_prime_UTR
AACCACTGAATGGAAAATCC+CGG 0.535658 4_4:-65490714 Msa0695800:three_prime_UTR
CTTCCTTCAATAAAGAGTCC+AGG 0.535939 4_4:+65493990 None:intergenic
ACATTCAAGACCCAACAGAT+TGG 0.536203 4_4:+65490833 None:intergenic
CAGTTCTCTTTGTAATACAT+GGG 0.538091 4_4:-65490543 Msa0695800:three_prime_UTR
TCAAGACCCAACAGATTGGC+AGG 0.538176 4_4:+65490837 None:intergenic
TCTTCAACGGTCTTGATGCC+CGG 0.538757 4_4:+65489778 None:intergenic
AAATAGCTAGAGGGGTTGAG+AGG 0.539454 4_4:-65491121 Msa0695800:three_prime_UTR
GACGGTGCCTACGTTGGCAA+CGG 0.539764 4_4:+65489642 None:intergenic
TGGGCATCAGGGCTTCGTAT+AGG 0.539792 4_4:-65493895 Msa0695800:CDS
GTGTGGCGGAGGATCTCATC+GGG 0.543492 4_4:+65489706 None:intergenic
GATTTGGGCTATTAATAGGA+AGG 0.544697 4_4:+65490047 None:intergenic
GTTTGTTGATGGGGATGAAG+AGG 0.545453 4_4:+65495399 None:intergenic
GGATTGGACTGAGTTGGACT+CGG 0.547239 4_4:+65495331 None:intergenic
CTAGTGAGTTGGGAACGGTT+GGG 0.548429 4_4:-65491444 Msa0695800:three_prime_UTR
GAGTATGTAAATAGCTAGAG+GGG 0.549222 4_4:-65491129 Msa0695800:three_prime_UTR
GGAGAGCAAGTCCGTGTGAA+GGG 0.549755 4_4:-65491762 Msa0695800:CDS
GCCAAAGGCCGCGTATTGCA+AGG 0.549811 4_4:-65489500 Msa0695800:three_prime_UTR
GCTCTTGACAGTTTCTTCAA+CGG 0.549867 4_4:+65489765 None:intergenic
AAGGTTTGAAGGAGAAGCGA+GGG 0.550811 4_4:+65495369 None:intergenic
TTGTTGTTGAGGAATGAGTC+TGG 0.550825 4_4:+65495154 None:intergenic
AGAGACCAAAGAAATTGAAT+GGG 0.551146 4_4:+65489926 None:intergenic
TTAGTAAGAATTGGGGCATG+TGG 0.552472 4_4:-65491070 Msa0695800:three_prime_UTR
TTATTGCAATAGGGGAATGA+GGG 0.552632 4_4:+65490394 None:intergenic
GCTTGCTTATTCTTTACAGG+AGG 0.553481 4_4:-65490328 Msa0695800:three_prime_UTR
CGGACTTGCTCTCCAAATTG+TGG 0.554429 4_4:+65491771 None:intergenic
TGGGGATGATGAAACAATCT+TGG 0.554483 4_4:-65491703 Msa0695800:CDS
TTTACTACAACCTTCTGTTG+TGG 0.555632 4_4:+65495473 None:intergenic
GTTCATCTCTAAGTTACCCC+GGG 0.556248 4_4:+65490696 None:intergenic
GTCTGTTGGAGTACGTCCGA+CGG 0.557543 4_4:+65495208 None:intergenic
AGAGACGACTCCAGGAGTAA+TGG 0.558135 4_4:+65493497 None:intergenic
AAGAACACTCGCTGCTTCCA+GGG 0.558472 4_4:-65495039 Msa0695800:CDS
GTCTCCGATGTTCCATCGAG+TGG 0.560814 4_4:-65489536 Msa0695800:three_prime_UTR
AGGTGGAACTTATCATGGAC+AGG 0.561018 4_4:+65489733 None:intergenic
CTCCTTGGCGTATCCGTAGA+CGG 0.561808 4_4:+65489819 None:intergenic
AGGTTGCAGGTGAGTTGCAT+CGG 0.562147 4_4:+65495419 None:intergenic
GATTTAACAGTAAATATTGA+GGG 0.563255 4_4:-65493530 Msa0695800:CDS
TGAATGGGTATATATAAATG+AGG 0.563981 4_4:+65489941 None:intergenic
GCAATAAGCTAACAGCAGCT+TGG 0.564108 4_4:-65490378 Msa0695800:three_prime_UTR
TATAGGTATTTGCTTCCAGA+AGG 0.564358 4_4:-65493878 Msa0695800:CDS
TGCAGATATTGGAGATCACC+AGG 0.564613 4_4:-65493186 Msa0695800:intron
AAATAGTAACAAATACTCTC+CGG 0.565962 4_4:+65491092 None:intergenic
GATTATTGGTGCCGCAGAGA+AGG 0.567110 4_4:-65489461 Msa0695800:three_prime_UTR
CTTATCTAGTGAGTTGGGAA+CGG 0.567985 4_4:-65491449 Msa0695800:three_prime_UTR
TCTGTTGGAGTACGTCCGAC+GGG 0.568179 4_4:+65495209 None:intergenic
TGATAGAGCAAGTGAAGACC+TGG 0.568238 4_4:-65494050 Msa0695800:CDS
CTCTTTGTAATACATGGGAT+GGG 0.569356 4_4:-65490538 Msa0695800:three_prime_UTR
TTACTCCAAGTGCGAGCCCG+TGG 0.570477 4_4:-65489599 Msa0695800:three_prime_UTR
AGGTTGCAATTCTGTTGAAG+AGG 0.570911 4_4:-65493582 Msa0695800:CDS
GCATCACTTATGTCAAAAGC+CGG 0.571118 4_4:-65493263 Msa0695800:CDS
GGAGGATCTCATCGGGAACA+AGG 0.575130 4_4:+65489713 None:intergenic
ATAGCCTCAAAACTCTCGAA+TGG 0.578502 4_4:-65495307 Msa0695800:CDS
AGGAATGAGTCTGGCAGCGG+AGG 0.579503 4_4:+65495163 None:intergenic
GTGGTGGTCTTGATTGGTAT+CGG 0.581002 4_4:+65489684 None:intergenic
TTCCTCCCAATCCCTTCACA+CGG 0.581458 4_4:+65491751 None:intergenic
TTAGAGATGAACAGCAGCAA+TGG 0.583200 4_4:-65490685 Msa0695800:three_prime_UTR
AAGATTGTTTCATCATCCCC+AGG 0.584283 4_4:+65491705 None:intergenic
AACTGCTTCAATGAAAACGT+TGG 0.585712 4_4:-65493291 Msa0695800:CDS
TGGAGAGCAAGTCCGTGTGA+AGG 0.586036 4_4:-65491763 Msa0695800:CDS
TGAAACGATGCTTATGGCAA+AGG 0.587621 4_4:-65492006 Msa0695800:CDS
TGCCGCAGAGAAGGAACGTA+AGG 0.588757 4_4:-65489452 Msa0695800:three_prime_UTR
TATCAGTATGCACCAAAGAC+AGG 0.589742 4_4:+65489419 None:intergenic
TTTGTTGGATAAAATTCTTG+AGG 0.589996 4_4:-65493684 Msa0695800:CDS
TGTTCATCTCTAAGTTACCC+CGG 0.590270 4_4:+65490695 None:intergenic
GCTATCGGATTGGACTGAGT+TGG 0.590319 4_4:+65495325 None:intergenic
ACTAGTTCTCCCACTCATCA+GGG 0.590763 4_4:-65491603 Msa0695800:CDS
TTGAGGAATGAGTCTGGCAG+CGG 0.591996 4_4:+65495160 None:intergenic
TTTCAGATAATGTCACACTA+AGG 0.593354 4_4:-65493466 Msa0695800:CDS
TACCTGCTTTCCCTGATGAG+TGG 0.594282 4_4:+65491593 None:intergenic
TTCTCCACTCGATGGAACAT+CGG 0.594689 4_4:+65489532 None:intergenic
TAGAATGTGCGTGGGCATCA+GGG 0.594705 4_4:-65493906 Msa0695800:CDS
GGCGGAGGAGCCCATTGAAG+TGG 0.595273 4_4:+65495250 None:intergenic
CCGTCTCTGAAATGGCGGTG+AGG 0.595577 4_4:-65489624 Msa0695800:three_prime_UTR
AATGCGATCAGCGCCACTGA+TGG 0.596091 4_4:+65491806 None:intergenic
TTCAGAGACGGTGCCTACGT+TGG 0.598137 4_4:+65489636 None:intergenic
GCGTCGATCTAGAATGTGCG+TGG 0.598379 4_4:-65493915 Msa0695800:CDS
AAAGAGGAGAACAAACGTAC+CGG 0.599308 4_4:+65489964 None:intergenic
GGCCTTACGTTCCTTCTCTG+CGG 0.599906 4_4:+65489450 None:intergenic
TAGGCTTTCAAACTCTGAAG+CGG 0.601365 4_4:-65493774 Msa0695800:CDS
GCTGTTGGTTCTCCCATCAG+TGG 0.602482 4_4:-65491819 Msa0695800:CDS
GAAGGGTGAAGCTAATGAGT+AGG 0.602642 4_4:+65490065 None:intergenic
ATCTCAGGACCTAATACTGG+AGG 0.603222 4_4:-65493317 Msa0695800:CDS
AAAACCCAATCCACAACAGA+AGG 0.603222 4_4:-65495483 Msa0695800:five_prime_UTR
CAACTGCATTCTCCACTCGA+TGG 0.604282 4_4:+65489524 None:intergenic
GCATACTGATAGGATAGCTA+AGG 0.606425 4_4:-65489407 Msa0695800:three_prime_UTR
GTACTTCTCCTTGCAATACG+CGG 0.606836 4_4:+65489492 None:intergenic
ATTTGGGCTATTAATAGGAA+GGG 0.608624 4_4:+65490048 None:intergenic
CTTGATTGGTATCGGTGTGG+CGG 0.609440 4_4:+65489692 None:intergenic
TGGATATATCCAATAGCGGA+GGG 0.610015 4_4:-65491151 Msa0695800:three_prime_UTR
AGCTGCGATCCATCTTGAGA+TGG 0.610710 4_4:-65490590 Msa0695800:three_prime_UTR
CTGTATCTAATCATTCACAC+AGG 0.610846 4_4:-65494986 Msa0695800:intron
GGGAATAGTCAACAATCTAC+CGG 0.610891 4_4:+65495079 None:intergenic
AGCAATAGATTTGAACAACA+TGG 0.612310 4_4:-65493801 Msa0695800:CDS
GTCCGTGTGAAGGGATTGGG+AGG 0.612668 4_4:-65491753 Msa0695800:CDS
AGCAGACTGTGGCTTCGGCG+TGG 0.612873 4_4:-65489573 Msa0695800:three_prime_UTR
TCGGTTGAGTAGCAGAAGCA+AGG 0.613416 4_4:+65495350 None:intergenic
GTATATATAAATGAGGAAAG+AGG 0.613547 4_4:+65489948 None:intergenic
AAAGCTCATACTCCTGCTGT+TGG 0.614300 4_4:-65491834 Msa0695800:CDS
GGATCTACGAGGTATGCGAC+TGG 0.616506 4_4:-65490617 Msa0695800:three_prime_UTR
AGACGGCGTTGAACCGCATG+AGG 0.616715 4_4:+65489836 None:intergenic
TTGGATATATCCAATAGCGG+AGG 0.618036 4_4:-65491152 Msa0695800:three_prime_UTR
AGGGCTCCCGTTGCCAACGT+AGG 0.619019 4_4:-65489649 Msa0695800:three_prime_UTR
GCTTCTAAAAGCGCGTCACA+AGG 0.619119 4_4:-65493401 Msa0695800:CDS
CGCCGTCTACGGATACGCCA+AGG 0.620888 4_4:-65489821 Msa0695800:three_prime_UTR
AATTAGATCTGGAACTAGAG+TGG 0.621351 4_4:-65493345 Msa0695800:CDS
AACAACGCCCGTTTACCCGT+CGG 0.621448 4_4:-65495224 Msa0695800:CDS
CTGATGGGAGAACCAACAGC+AGG 0.622975 4_4:+65491822 None:intergenic
CCCATTCATCCATTGAGCAT+AGG 0.623957 4_4:+65493637 None:intergenic
GGTGTGGCGGAGGATCTCAT+CGG 0.625467 4_4:+65489705 None:intergenic
CAGTAAATATTGAGGGTATG+CGG 0.626418 4_4:-65493523 Msa0695800:CDS
GATAAGACAGTTAGAGCGGA+AGG 0.627686 4_4:-65491422 Msa0695800:three_prime_UTR
GCCCGTGGCAGAGCAGACTG+TGG 0.630848 4_4:-65489584 Msa0695800:three_prime_UTR
CAAGGTTTGAAGGAGAAGCG+AGG 0.631968 4_4:+65495368 None:intergenic
GGGAGTATGTAAATAGCTAG+AGG 0.632665 4_4:-65491131 Msa0695800:three_prime_UTR
GAAAAGTCGAGTTGTTGTTG+AGG 0.632731 4_4:+65495143 None:intergenic
CCTCACCGCCATTTCAGAGA+CGG 0.633755 4_4:+65489624 None:intergenic
CAATCTACCGGAAACAGCAA+CGG 0.634527 4_4:+65495091 None:intergenic
AGCAGCGAGTGTTCTTCGAA+CGG 0.642225 4_4:+65495046 None:intergenic
GGTGATCTCCAATATCTGCA+AGG 0.644964 4_4:+65493189 None:intergenic
ACAAGTAATACTTCCTCATG+CGG 0.649841 4_4:-65489849 Msa0695800:three_prime_UTR
CGTCGATCTAGAATGTGCGT+GGG 0.653354 4_4:-65493914 Msa0695800:CDS
GGGTAATGGAAATGGAACAA+TGG 0.655085 4_4:-65493423 Msa0695800:CDS
GCAAACATCTAAGAATACTG+TGG 0.660918 4_4:-65490638 Msa0695800:three_prime_UTR
AAACTGTCAAGAGCGTGGTG+GGG 0.666765 4_4:-65489756 Msa0695800:three_prime_UTR
TGAAGAAACTGTCAAGAGCG+TGG 0.667370 4_4:-65489761 Msa0695800:three_prime_UTR
TCTCAGGACCTAATACTGGA+GGG 0.667789 4_4:-65493316 Msa0695800:CDS
TAGATCTGGAACTAGAGTGG+TGG 0.673809 4_4:-65493342 Msa0695800:CDS
TAATATTTATTATGGTCCAG+CGG 0.675272 4_4:-65490662 Msa0695800:three_prime_UTR
GCAGGTGAGTTGCATCGGTG+TGG 0.676745 4_4:+65495424 None:intergenic
AGAAACTGTCAAGAGCGTGG+TGG 0.681914 4_4:-65489758 Msa0695800:three_prime_UTR
CTATGCTCAATGGATGAATG+GGG 0.683732 4_4:-65493636 Msa0695800:CDS
GAGCCCTGTGCCCAGCACAG+TGG 0.686300 4_4:+65489665 None:intergenic
GGTCTTGATTGGTATCGGTG+TGG 0.686331 4_4:+65489689 None:intergenic
TTGGGATAAGACAGTTAGAG+CGG 0.690457 4_4:-65491426 Msa0695800:three_prime_UTR
CACAGTGGTAGAATTGCCTG+GGG 0.691114 4_4:-65491721 Msa0695800:CDS
AGGCACCGTCTCTGAAATGG+CGG 0.693423 4_4:-65489629 Msa0695800:three_prime_UTR
AATACATGGGATGGGCACTG+GGG 0.701367 4_4:-65490530 Msa0695800:three_prime_UTR
GGATCTCATCGGGAACAAGG+TGG 0.702623 4_4:+65489716 None:intergenic
TGAAGAGGACAATGACATTG+CGG 0.707528 4_4:-65493567 Msa0695800:CDS
CCCAGGCAATTCTACCACTG+TGG 0.714085 4_4:+65491722 None:intergenic
GGGAGGAAAATTAGCCACAG+TGG 0.714859 4_4:-65491736 Msa0695800:CDS
GCAAGGATAAGGTCAAACCA+AGG 0.720894 4_4:+65493206 None:intergenic
GAGGAGAACAAACGTACCGG+AGG 0.722026 4_4:+65489967 None:intergenic
AATTACATGATAGAACAATG+AGG 0.731534 4_4:+65491037 None:intergenic
CCACTGAATGGAAAATCCCG+GGG 0.744139 4_4:-65490712 Msa0695800:three_prime_UTR
AAGAATACTGTGGATCTACG+AGG 0.748281 4_4:-65490628 Msa0695800:three_prime_UTR
GGTTCAAAATGAGTGACACG+AGG 0.753470 4_4:+65490469 None:intergenic
TGTCAAGGAAGAAAACAGAG+TGG 0.757033 4_4:-65491512 Msa0695800:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATATATATATATATCATG+TGG - chr4_4:65491662-65491681 Msa0695800:CDS 10.0%
!! TTCATATAAATAAAAGTTAT+TGG - chr4_4:65493455-65493474 Msa0695800:CDS 10.0%
!!! AATTTAGAATTGATATATTT+TGG - chr4_4:65493555-65493574 Msa0695800:CDS 10.0%
!!! TTTTATTTATTTATGAACAA+AGG + chr4_4:65495475-65495494 None:intergenic 10.0%
!! ATAATGATTATCATACTATA+TGG + chr4_4:65492324-65492343 None:intergenic 15.0%
!!! ATTTCAGATAAACTTTAAAA+GGG + chr4_4:65492350-65492369 None:intergenic 15.0%
!! AATTTCAGATAAACTTTAAA+AGG + chr4_4:65492351-65492370 None:intergenic 15.0%
!!! ATTATCTAAAATATTCTTCA+TGG - chr4_4:65493424-65493443 Msa0695800:CDS 15.0%
!! AAATACCTTTCAATAAAATT+TGG + chr4_4:65493491-65493510 None:intergenic 15.0%
!!! AAGGTATTTTATATTTAATC+TGG - chr4_4:65493502-65493521 Msa0695800:CDS 15.0%
!!! TTACTATTTTAGTAAGAATT+GGG - chr4_4:65493672-65493691 Msa0695800:CDS 15.0%
!!! AATTTTGTCTAAATCAAATT+AGG + chr4_4:65493889-65493908 None:intergenic 15.0%
!! AAAGAATGTTCAAAAAATAA+AGG + chr4_4:65495412-65495431 None:intergenic 15.0%
!! AAATAAAAGGAAACAGTTTA+TGG - chr4_4:65489984-65490003 Msa0695800:three_prime_UTR 20.0%
!! AATAAAAGGAAACAGTTTAT+GGG - chr4_4:65489985-65490004 Msa0695800:three_prime_UTR 20.0%
!!! TTTTACTTTGGATTTGTAAA+AGG + chr4_4:65490539-65490558 None:intergenic 20.0%
!!! ATTTTTGTGAACTTTTACTT+TGG + chr4_4:65490551-65490570 None:intergenic 20.0%
!! CAAAATTGTAATTTCCTAAT+GGG - chr4_4:65490626-65490645 Msa0695800:three_prime_UTR 20.0%
!! ATCAGAGATAAAATATTTGT+TGG - chr4_4:65491051-65491070 Msa0695800:three_prime_UTR 20.0%
!! GATTTAACAGTAAATATTGA+GGG - chr4_4:65491220-65491239 Msa0695800:three_prime_UTR 20.0%
!! ATATTTAAATTAACAGCTCT+TGG + chr4_4:65492501-65492520 None:intergenic 20.0%
!! CTTTAATTATTGAATTGAGT+TGG + chr4_4:65492867-65492886 None:intergenic 20.0%
!! TTGCAAAATAACTTTCTTAA+TGG + chr4_4:65493273-65493292 None:intergenic 20.0%
!!! GAAATCCAAATTTTATTGAA+AGG - chr4_4:65493483-65493502 Msa0695800:CDS 20.0%
!!! CATTTTTTCTTTTGAACTAA+TGG - chr4_4:65493525-65493544 Msa0695800:CDS 20.0%
!!! GTTACTATTTTAGTAAGAAT+TGG - chr4_4:65493671-65493690 Msa0695800:CDS 20.0%
!!! TACTATTTTAGTAAGAATTG+GGG - chr4_4:65493673-65493692 Msa0695800:CDS 20.0%
!! ATTGTTCTATCATGTAATTT+GGG - chr4_4:65493717-65493736 Msa0695800:CDS 20.0%
!!! TTAAGAAGCCAATTTTAAAA+AGG + chr4_4:65493866-65493885 None:intergenic 20.0%
!! AGCAATGGTAATATTTATTA+TGG - chr4_4:65494080-65494099 Msa0695800:CDS 20.0%
!!! AAAAAGTATCAACAAAACAA+AGG + chr4_4:65494590-65494609 None:intergenic 20.0%
!!! TGTTTTGTTGATACTTTTTA+TGG - chr4_4:65494591-65494610 Msa0695800:intron 20.0%
!!! ATTTTTAGAAGAGTAATAGT+GGG + chr4_4:65494734-65494753 None:intergenic 20.0%
!!! TATTTTTAGAAGAGTAATAG+TGG + chr4_4:65494735-65494754 None:intergenic 20.0%
!! TCAATAGTTTAAGACATGTT+TGG - chr4_4:65489814-65489833 Msa0695800:three_prime_UTR 25.0%
! TTTCAGACATTTCTAATTGA+TGG - chr4_4:65490099-65490118 Msa0695800:three_prime_UTR 25.0%
!! ATCAACGTTTTTGATGTTTA+TGG - chr4_4:65490287-65490306 Msa0695800:three_prime_UTR 25.0%
!! TCAACGTTTTTGATGTTTAT+GGG - chr4_4:65490288-65490307 Msa0695800:three_prime_UTR 25.0%
!! GTATTTTTCTTGACAAAGTT+CGG - chr4_4:65490418-65490437 Msa0695800:three_prime_UTR 25.0%
!! TGATGCAATTGTTTTCAATT+AGG - chr4_4:65490579-65490598 Msa0695800:three_prime_UTR 25.0%
!! ATTTTGCAGTATTTCAAGAA+GGG + chr4_4:65490612-65490631 None:intergenic 25.0%
!! AATTTTGCAGTATTTCAAGA+AGG + chr4_4:65490613-65490632 None:intergenic 25.0%
! GCAAAATTGTAATTTCCTAA+TGG - chr4_4:65490625-65490644 Msa0695800:three_prime_UTR 25.0%
!!! AAGTATCGTCTCAAATTTTT+CGG - chr4_4:65490780-65490799 Msa0695800:three_prime_UTR 25.0%
! TTCAAATCTATTGCTTCTTT+CGG + chr4_4:65490944-65490963 None:intergenic 25.0%
! TTTGTTGGATAAAATTCTTG+AGG - chr4_4:65491066-65491085 Msa0695800:three_prime_UTR 25.0%
! CGATTTAACAGTAAATATTG+AGG - chr4_4:65491219-65491238 Msa0695800:three_prime_UTR 25.0%
! AAAAAAGTTCAGATATTACC+TGG + chr4_4:65491585-65491604 None:intergenic 25.0%
!! AAAATCTCTCAACTTTTAGT+GGG - chr4_4:65491740-65491759 Msa0695800:CDS 25.0%
! TTATTATAGTTTCTTCTCCT+TGG - chr4_4:65492297-65492316 Msa0695800:intron 25.0%
! ATTAATAGATATCCAATCCT+CGG - chr4_4:65492469-65492488 Msa0695800:intron 25.0%
!! TAACGGCATTATGAAAATTT+TGG + chr4_4:65492540-65492559 None:intergenic 25.0%
! GAAAAGCAACTAAAAGATTT+GGG - chr4_4:65492835-65492854 Msa0695800:intron 25.0%
! TTAATATAGTTAACCTGTCA+AGG - chr4_4:65493223-65493242 Msa0695800:CDS 25.0%
! ATCCAAAAAACTCTATGTTT+GGG + chr4_4:65493584-65493603 None:intergenic 25.0%
! TATCCAAAAAACTCTATGTT+TGG + chr4_4:65493585-65493604 None:intergenic 25.0%
!! TTTTTGGATATATCCAATAG+CGG - chr4_4:65493595-65493614 Msa0695800:CDS 25.0%
! AAATAGTAACAAATACTCTC+CGG + chr4_4:65493661-65493680 None:intergenic 25.0%
! AATTACATGATAGAACAATG+AGG + chr4_4:65493716-65493735 None:intergenic 25.0%
! CATTGTTCTATCATGTAATT+TGG - chr4_4:65493716-65493735 Msa0695800:CDS 25.0%
! TGGTATTTATTACAGAAAAC+AGG + chr4_4:65493752-65493771 None:intergenic 25.0%
! CAATTTCCAAATATGATGTT+AGG + chr4_4:65493779-65493798 None:intergenic 25.0%
! CTAACATCATATTTGGAAAT+TGG - chr4_4:65493777-65493796 Msa0695800:CDS 25.0%
! TTCAGATCATCCTATAATAT+AGG - chr4_4:65493803-65493822 Msa0695800:CDS 25.0%
! ATTCAATGTGCCTATATTAT+AGG + chr4_4:65493816-65493835 None:intergenic 25.0%
!!! ATCTGTCTCCTTTTTAAAAT+TGG - chr4_4:65493855-65493874 Msa0695800:CDS 25.0%
! TAATATTTATTATGGTCCAG+CGG - chr4_4:65494088-65494107 Msa0695800:CDS 25.0%
! ATTACAAAGAGAACTGAATA+TGG + chr4_4:65494203-65494222 None:intergenic 25.0%
!! ACACTTGTTGGTATAATTAA+AGG - chr4_4:65494493-65494512 Msa0695800:intron 25.0%
! GTATATATAAATGAGGAAAG+AGG + chr4_4:65494805-65494824 None:intergenic 25.0%
! TGAATGGGTATATATAAATG+AGG + chr4_4:65494812-65494831 None:intergenic 25.0%
! ATATACCCATTCAATTTCTT+TGG - chr4_4:65494819-65494838 Msa0695800:intron 25.0%
! GTTTGATAGTTTGAAACACT+TGG - chr4_4:65489738-65489757 Msa0695800:three_prime_UTR 30.0%
ACTTATTTGAGCTAATCTAC+CGG + chr4_4:65490128-65490147 None:intergenic 30.0%
ACTATTACTTAGCGTATGTT+TGG + chr4_4:65490155-65490174 None:intergenic 30.0%
AGAAATTCTCTAAGCAATCA+AGG + chr4_4:65490219-65490238 None:intergenic 30.0%
TTGCTTAGAGAATTTCTGTA+TGG - chr4_4:65490222-65490241 Msa0695800:three_prime_UTR 30.0%
!!! CACTCTTTTAAGACCTTATT+GGG + chr4_4:65490471-65490490 None:intergenic 30.0%
!!! ACACTCTTTTAAGACCTTAT+TGG + chr4_4:65490472-65490491 None:intergenic 30.0%
! TTTTGCAGTATTTCAAGAAG+GGG + chr4_4:65490611-65490630 None:intergenic 30.0%
! TTGCATAGATTGCAATCTTT+TGG - chr4_4:65490670-65490689 Msa0695800:three_prime_UTR 30.0%
TCATTAGATCAGAACGAAAA+AGG - chr4_4:65490726-65490745 Msa0695800:three_prime_UTR 30.0%
AAAAAGGAACATAGAAATCC+TGG - chr4_4:65490742-65490761 Msa0695800:three_prime_UTR 30.0%
! AGTATCGTCTCAAATTTTTC+GGG - chr4_4:65490781-65490800 Msa0695800:three_prime_UTR 30.0%
AGCAATAGATTTGAACAACA+TGG - chr4_4:65490949-65490968 Msa0695800:three_prime_UTR 30.0%
ATTTGAACAACATGGAAGTT+AGG - chr4_4:65490957-65490976 Msa0695800:three_prime_UTR 30.0%
! GTATGTCCAATTTTCAGTTT+AGG - chr4_4:65491136-65491155 Msa0695800:three_prime_UTR 30.0%
! AGAGTACCTAAACTGAAAAT+TGG + chr4_4:65491145-65491164 None:intergenic 30.0%
! ATTTTCAGTTTAGGTACTCT+TGG - chr4_4:65491145-65491164 Msa0695800:three_prime_UTR 30.0%
TTTCAGATAATGTCACACTA+AGG - chr4_4:65491284-65491303 Msa0695800:three_prime_UTR 30.0%
!!! GATCTAATTTTGAAGTCAAC+TGG + chr4_4:65491394-65491413 None:intergenic 30.0%
! GTTGACTTCAAAATTAGATC+TGG - chr4_4:65491394-65491413 Msa0695800:three_prime_UTR 30.0%
! AGTTGAGAGATTTTGTTCAA+GGG + chr4_4:65491734-65491753 None:intergenic 30.0%
! AAGTTGAGAGATTTTGTTCA+AGG + chr4_4:65491735-65491754 None:intergenic 30.0%
! CAAAATCTCTCAACTTTTAG+TGG - chr4_4:65491739-65491758 Msa0695800:CDS 30.0%
CTTGTTCTCATTGATGAAAT+TGG - chr4_4:65491811-65491830 Msa0695800:CDS 30.0%
! ATCTAAGTACTTTGAAGGAA+AGG - chr4_4:65491935-65491954 Msa0695800:CDS 30.0%
! TCTAAGTACTTTGAAGGAAA+GGG - chr4_4:65491936-65491955 Msa0695800:CDS 30.0%
TTAAGCATAGTGCAATCTAT+TGG - chr4_4:65492054-65492073 Msa0695800:intron 30.0%
CATTACAGGAGGAAAAAAAT+CGG - chr4_4:65492169-65492188 Msa0695800:intron 30.0%
GTTCATAATTTCTGCATGAA+TGG + chr4_4:65492223-65492242 None:intergenic 30.0%
TTATCATACTATATGGACCA+AGG + chr4_4:65492317-65492336 None:intergenic 30.0%
GGATTGGATATCTATTAATG+AGG + chr4_4:65492468-65492487 None:intergenic 30.0%
TTAATAGATATCCAATCCTC+GGG - chr4_4:65492470-65492489 Msa0695800:intron 30.0%
! ATGAAAATTTTGGATGGAAG+AGG + chr4_4:65492530-65492549 None:intergenic 30.0%
! GGCATTATGAAAATTTTGGA+TGG + chr4_4:65492536-65492555 None:intergenic 30.0%
! TTTCATAATGCCGTTATTTC+TGG - chr4_4:65492544-65492563 Msa0695800:intron 30.0%
!! TTCATAATGCCGTTATTTCT+GGG - chr4_4:65492545-65492564 Msa0695800:intron 30.0%
GATCTTTGCAAAAGAAGAAA+AGG + chr4_4:65492695-65492714 None:intergenic 30.0%
! TTCTTTTGCAAAGATCCAAA+GGG - chr4_4:65492699-65492718 Msa0695800:intron 30.0%
CGAAAAGCAACTAAAAGATT+TGG - chr4_4:65492834-65492853 Msa0695800:intron 30.0%
ACATCATATACTCCACAATT+TGG - chr4_4:65492967-65492986 Msa0695800:intron 30.0%
AGTAATCTTATCTAGTGAGT+TGG - chr4_4:65493295-65493314 Msa0695800:CDS 30.0%
GTAATCTTATCTAGTGAGTT+GGG - chr4_4:65493296-65493315 Msa0695800:CDS 30.0%
TCCAAAAAACTCTATGTTTG+GGG + chr4_4:65493583-65493602 None:intergenic 30.0%
TCAGTTCTCTTTGTAATACA+TGG - chr4_4:65494206-65494225 Msa0695800:intron 30.0%
CAGTTCTCTTTGTAATACAT+GGG - chr4_4:65494207-65494226 Msa0695800:intron 30.0%
ACAGTACATCCATAATTCAT+TGG + chr4_4:65494314-65494333 None:intergenic 30.0%
! ATCAATCGAGTGACTAATTT+TGG - chr4_4:65494445-65494464 Msa0695800:intron 30.0%
!!! ATTTGCCAAACTTTTAGCTT+AGG - chr4_4:65494628-65494647 Msa0695800:intron 30.0%
!!! TTTGCCAAACTTTTAGCTTA+GGG - chr4_4:65494629-65494648 Msa0695800:intron 30.0%
TAATGAGTAGGCAAAAACAA+CGG + chr4_4:65494676-65494695 None:intergenic 30.0%
ATTTGGGCTATTAATAGGAA+GGG + chr4_4:65494705-65494724 None:intergenic 30.0%
!! ATCTGATTTGGGCTATTAAT+AGG + chr4_4:65494710-65494729 None:intergenic 30.0%
! TAATAGTGGGAATCTGATTT+GGG + chr4_4:65494721-65494740 None:intergenic 30.0%
AGAGACCAAAGAAATTGAAT+GGG + chr4_4:65494827-65494846 None:intergenic 30.0%
TAGAGACCAAAGAAATTGAA+TGG + chr4_4:65494828-65494847 None:intergenic 30.0%
!! ACTTTTCTTCTCATTTTTGC+AGG - chr4_4:65494859-65494878 Msa0695800:intron 30.0%
!! CTTTTCTTCTCATTTTTGCA+GGG - chr4_4:65494860-65494879 Msa0695800:intron 30.0%
!! AAGTACAATGCATCGATTAT+TGG - chr4_4:65495275-65495294 Msa0695800:CDS 30.0%
CTTTGCTAGTAATTAGTTAC+TGG - chr4_4:65495428-65495447 Msa0695800:exon 30.0%
TTTACTACAACCTTCTGTTG+TGG + chr4_4:65489280-65489299 None:intergenic 35.0%
CAAACTATCAAACAATTCCC+TGG + chr4_4:65489731-65489750 None:intergenic 35.0%
CTGTATCTAATCATTCACAC+AGG - chr4_4:65489764-65489783 Msa0695800:three_prime_UTR 35.0%
TTTATTTCCATCATCTCTCG+AGG + chr4_4:65489971-65489990 None:intergenic 35.0%
!! CGAGAGATGATGGAAATAAA+AGG - chr4_4:65489971-65489990 Msa0695800:three_prime_UTR 35.0%
! GAAAGTGATGGAAACTGATT+GGG + chr4_4:65490046-65490065 None:intergenic 35.0%
! TGAAAGTGATGGAAACTGAT+TGG + chr4_4:65490047-65490066 None:intergenic 35.0%
!! ATAGCTCTATTGCTATTTCG+CGG + chr4_4:65490080-65490099 None:intergenic 35.0%
! CATTTCTAATTGATGGCTAC+CGG - chr4_4:65490106-65490125 Msa0695800:three_prime_UTR 35.0%
! AGCAGCTTCTTTTATGCATT+TGG - chr4_4:65490385-65490404 Msa0695800:three_prime_UTR 35.0%
! GCAGCTTCTTTTATGCATTT+GGG - chr4_4:65490386-65490405 Msa0695800:three_prime_UTR 35.0%
! TTCTTTTATGCATTTGGGCT+AGG - chr4_4:65490391-65490410 Msa0695800:three_prime_UTR 35.0%
CATAATGTCATGTCCCAATA+AGG - chr4_4:65490455-65490474 Msa0695800:three_prime_UTR 35.0%
! TCTAATTGCACTTGTGCTTT+TGG - chr4_4:65490501-65490520 Msa0695800:three_prime_UTR 35.0%
! CTAATTGCACTTGTGCTTTT+GGG - chr4_4:65490502-65490521 Msa0695800:three_prime_UTR 35.0%
!! TTGTAATTTCCTAATGGGCT+TGG - chr4_4:65490631-65490650 Msa0695800:three_prime_UTR 35.0%
AATCCTGGACTCTTTATTGA+AGG - chr4_4:65490757-65490776 Msa0695800:three_prime_UTR 35.0%
GATCGACGCTTAGTAATAAA+TGG + chr4_4:65490824-65490843 None:intergenic 35.0%
TATAGGTATTTGCTTCCAGA+AGG - chr4_4:65490872-65490891 Msa0695800:three_prime_UTR 35.0%
ACTCAAAATTGCTCTTTCCT+CGG + chr4_4:65491002-65491021 None:intergenic 35.0%
! CAGTAAATATTGAGGGTATG+CGG - chr4_4:65491227-65491246 Msa0695800:three_prime_UTR 35.0%
TCTGGAAATTCTTCTGAGTT+GGG - chr4_4:65491307-65491326 Msa0695800:three_prime_UTR 35.0%
! AATTCTTCTGAGTTGGGTAA+TGG - chr4_4:65491313-65491332 Msa0695800:three_prime_UTR 35.0%
! AATTAGATCTGGAACTAGAG+TGG - chr4_4:65491405-65491424 Msa0695800:three_prime_UTR 35.0%
AACTGCTTCAATGAAAACGT+TGG - chr4_4:65491459-65491478 Msa0695800:three_prime_UTR 35.0%
ACTGCTTCAATGAAAACGTT+GGG - chr4_4:65491460-65491479 Msa0695800:three_prime_UTR 35.0%
!!! AGGAAGTTTTGGACTTTTCT+TGG + chr4_4:65491527-65491546 None:intergenic 35.0%
AGAAAAGTCCAAAACTTCCT+TGG - chr4_4:65491527-65491546 Msa0695800:three_prime_UTR 35.0%
!! TATCCGTAAGTTTTTGGAAG+TGG - chr4_4:65491774-65491793 Msa0695800:CDS 35.0%
!! GAGAACAAGTGATTGTTTTG+AGG + chr4_4:65491800-65491819 None:intergenic 35.0%
CTCATTGATGAAATTGGTAG+TGG - chr4_4:65491817-65491836 Msa0695800:CDS 35.0%
CCAGTATCTTACAATATCTG+CGG - chr4_4:65491872-65491891 Msa0695800:CDS 35.0%
CAGTATCTTACAATATCTGC+GGG - chr4_4:65491873-65491892 Msa0695800:CDS 35.0%
ACTTAGATCAGCATAATGAG+TGG + chr4_4:65491923-65491942 None:intergenic 35.0%
TGCTGATCTAAGTACTTTGA+AGG - chr4_4:65491930-65491949 Msa0695800:CDS 35.0%
!!! ATGTTTTGAAAATGCCGCAA+TGG - chr4_4:65491963-65491982 Msa0695800:CDS 35.0%
TTCCAGTGAAAATTCCATTG+CGG + chr4_4:65491980-65491999 None:intergenic 35.0%
AAACCTTGCAACCAACTTAT+AGG - chr4_4:65491998-65492017 Msa0695800:CDS 35.0%
AACCTTGCAACCAACTTATA+GGG - chr4_4:65491999-65492018 Msa0695800:CDS 35.0%
TAATTGACCATGCACAAAAG+TGG - chr4_4:65492091-65492110 Msa0695800:intron 35.0%
AATTGACCATGCACAAAAGT+GGG - chr4_4:65492092-65492111 Msa0695800:intron 35.0%
AATGCTCTATCAGTCATTAC+AGG - chr4_4:65492155-65492174 Msa0695800:intron 35.0%
GGAGGAAAAAAATCGGTTAA+AGG - chr4_4:65492176-65492195 Msa0695800:intron 35.0%
AATTATGAACGTGTACTCTG+AGG - chr4_4:65492233-65492252 Msa0695800:intron 35.0%
ACCAGAAAATCAAAGTGTGA+TGG - chr4_4:65492404-65492423 Msa0695800:intron 35.0%
!! TCCATCACACTTTGATTTTC+TGG + chr4_4:65492408-65492427 None:intergenic 35.0%
GGATATCTATTAATGAGGCA+CGG + chr4_4:65492463-65492482 None:intergenic 35.0%
TAATAGATATCCAATCCTCG+GGG - chr4_4:65492471-65492490 Msa0695800:intron 35.0%
!! TCATAATGCCGTTATTTCTG+GGG - chr4_4:65492546-65492565 Msa0695800:intron 35.0%
! ACCATTTTCCCCAGAAATAA+CGG + chr4_4:65492557-65492576 None:intergenic 35.0%
GAAGAAAAGGAAAAGAGTGA+GGG + chr4_4:65492682-65492701 None:intergenic 35.0%
AGAAGAAAAGGAAAAGAGTG+AGG + chr4_4:65492683-65492702 None:intergenic 35.0%
! CTTCTTTTGCAAAGATCCAA+AGG - chr4_4:65492698-65492717 Msa0695800:intron 35.0%
AGAGGATGCAAAATCTCAAA+TGG - chr4_4:65492792-65492811 Msa0695800:intron 35.0%
! AGTATGAGCTTTTACAATGG+AGG + chr4_4:65492908-65492927 None:intergenic 35.0%
!! AGGAGTATGAGCTTTTACAA+TGG + chr4_4:65492911-65492930 None:intergenic 35.0%
GAAACAATCTTGGTACAGTA+TGG - chr4_4:65493057-65493076 Msa0695800:intron 35.0%
GGAGTATGTAAATAGCTAGA+GGG - chr4_4:65493620-65493639 Msa0695800:CDS 35.0%
GAGTATGTAAATAGCTAGAG+GGG - chr4_4:65493621-65493640 Msa0695800:CDS 35.0%
CAAATATGATGTTAGGAAGC+TGG + chr4_4:65493772-65493791 None:intergenic 35.0%
CAGCTTCCTAACATCATATT+TGG - chr4_4:65493770-65493789 Msa0695800:CDS 35.0%
CTATTGTAGAAACCACTGAA+TGG - chr4_4:65494026-65494045 Msa0695800:CDS 35.0%
GCAAACATCTAAGAATACTG+TGG - chr4_4:65494112-65494131 Msa0695800:CDS 35.0%
TCTCTTTGTAATACATGGGA+TGG - chr4_4:65494211-65494230 Msa0695800:intron 35.0%
CTCTTTGTAATACATGGGAT+GGG - chr4_4:65494212-65494231 Msa0695800:intron 35.0%
CCATAATTCATTGGACTTTC+TGG + chr4_4:65494305-65494324 None:intergenic 35.0%
CCAGAAAGTCCAATGAATTA+TGG - chr4_4:65494302-65494321 Msa0695800:intron 35.0%
TTATTGCAATAGGGGAATGA+GGG + chr4_4:65494359-65494378 None:intergenic 35.0%
! CTGTTAGCTTATTGCAATAG+GGG + chr4_4:65494367-65494386 None:intergenic 35.0%
! GCTGTTAGCTTATTGCAATA+GGG + chr4_4:65494368-65494387 None:intergenic 35.0%
! TGCTGTTAGCTTATTGCAAT+AGG + chr4_4:65494369-65494388 None:intergenic 35.0%
TCTGCTTGCTTATTCTTTAC+AGG - chr4_4:65494419-65494438 Msa0695800:intron 35.0%
ACATACGTAAACACACTTGT+TGG - chr4_4:65494481-65494500 Msa0695800:intron 35.0%
ATCTCCCTAAGCTAAAAGTT+TGG + chr4_4:65494636-65494655 None:intergenic 35.0%
GGAGATCATAACAGAGAATA+GGG - chr4_4:65494650-65494669 Msa0695800:intron 35.0%
GATTTGGGCTATTAATAGGA+AGG + chr4_4:65494706-65494725 None:intergenic 35.0%
! GTAATAGTGGGAATCTGATT+TGG + chr4_4:65494722-65494741 None:intergenic 35.0%
ACAAGTAATACTTCCTCATG+CGG - chr4_4:65494901-65494920 Msa0695800:intron 35.0%
AAAACCCAATCCACAACAGA+AGG - chr4_4:65489267-65489286 Msa0695800:three_prime_UTR 40.0%
ACAACCTTCTGTTGTGGATT+GGG + chr4_4:65489274-65489293 None:intergenic 40.0%
TACAACCTTCTGTTGTGGAT+TGG + chr4_4:65489275-65489294 None:intergenic 40.0%
!!! TTCGAGAGTTTTGAGGCTAT+CGG + chr4_4:65489443-65489462 None:intergenic 40.0%
ATAGCCTCAAAACTCTCGAA+TGG - chr4_4:65489443-65489462 Msa0695800:three_prime_UTR 40.0%
! AGTTCCATTCGAGAGTTTTG+AGG + chr4_4:65489450-65489469 None:intergenic 40.0%
AGCATTCACTTCCACTTCAA+TGG - chr4_4:65489489-65489508 Msa0695800:three_prime_UTR 40.0%
GCATTCACTTCCACTTCAAT+GGG - chr4_4:65489490-65489509 Msa0695800:three_prime_UTR 40.0%
! AGGTTTGATCGAGAAGCTTT+TGG + chr4_4:65489570-65489589 None:intergenic 40.0%
! TTGTTGTTGAGGAATGAGTC+TGG + chr4_4:65489599-65489618 None:intergenic 40.0%
! GAAAAGTCGAGTTGTTGTTG+AGG + chr4_4:65489610-65489629 None:intergenic 40.0%
! CAACAACAACTCGACTTTTC+TGG - chr4_4:65489610-65489629 Msa0695800:three_prime_UTR 40.0%
GGGAATAGTCAACAATCTAC+CGG + chr4_4:65489674-65489693 None:intergenic 40.0%
CATTCACACAGGTTTGAACT+TGG - chr4_4:65489775-65489794 Msa0695800:three_prime_UTR 40.0%
GGGCAATCTAATGAAAGTGA+TGG + chr4_4:65490058-65490077 None:intergenic 40.0%
!! TAGCTCTATTGCTATTTCGC+GGG + chr4_4:65490079-65490098 None:intergenic 40.0%
GCAATCAAGGAATCATGCAT+TGG + chr4_4:65490206-65490225 None:intergenic 40.0%
! GTTGATGTCGTTTAGAACCT+TGG + chr4_4:65490273-65490292 None:intergenic 40.0%
GTTCTGATCTAATGATCTCC+AGG + chr4_4:65490721-65490740 None:intergenic 40.0%
CTTCCTTCAATAAAGAGTCC+AGG + chr4_4:65490763-65490782 None:intergenic 40.0%
GCATTCAGAACTATACCTTC+TGG + chr4_4:65490890-65490909 None:intergenic 40.0%
!! CTCTGGAGCAACATACTTTA+TGG - chr4_4:65490916-65490935 Msa0695800:three_prime_UTR 40.0%
! TAGGCTTTCAAACTCTGAAG+CGG - chr4_4:65490976-65490995 Msa0695800:three_prime_UTR 40.0%
CCTATGCTCAATGGATGAAT+GGG - chr4_4:65491113-65491132 Msa0695800:three_prime_UTR 40.0%
CTATGCTCAATGGATGAATG+GGG - chr4_4:65491114-65491133 Msa0695800:three_prime_UTR 40.0%
TTCAGTTTAGGTACTCTTGG+AGG - chr4_4:65491148-65491167 Msa0695800:three_prime_UTR 40.0%
AGGTTGCAATTCTGTTGAAG+AGG - chr4_4:65491168-65491187 Msa0695800:three_prime_UTR 40.0%
TGAAGAGGACAATGACATTG+CGG - chr4_4:65491183-65491202 Msa0695800:three_prime_UTR 40.0%
GATAATGTCACACTAAGGTC+TGG - chr4_4:65491289-65491308 Msa0695800:three_prime_UTR 40.0%
GTCTGGAAATTCTTCTGAGT+TGG - chr4_4:65491306-65491325 Msa0695800:three_prime_UTR 40.0%
!! TCTGAGTTGGGTAATGGAAA+TGG - chr4_4:65491319-65491338 Msa0695800:three_prime_UTR 40.0%
!! GGGTAATGGAAATGGAACAA+TGG - chr4_4:65491327-65491346 Msa0695800:three_prime_UTR 40.0%
!!! TTTTGAAGTCAACTGGCACA+GGG + chr4_4:65491387-65491406 None:intergenic 40.0%
!!! ATTTTGAAGTCAACTGGCAC+AGG + chr4_4:65491388-65491407 None:intergenic 40.0%
! CTTTTGACATAAGTGATGCC+AGG + chr4_4:65491486-65491505 None:intergenic 40.0%
GCATCACTTATGTCAAAAGC+CGG - chr4_4:65491487-65491506 Msa0695800:three_prime_UTR 40.0%
!!! AGTTTTGGACTTTTCTTGGC+AGG + chr4_4:65491523-65491542 None:intergenic 40.0%
! AGGTCAAACCAAGGAAGTTT+TGG + chr4_4:65491538-65491557 None:intergenic 40.0%
GACCTTATCCTTGCAGATAT+TGG - chr4_4:65491553-65491572 Msa0695800:exon 40.0%
CTCCAATATCTGCAAGGATA+AGG + chr4_4:65491558-65491577 None:intergenic 40.0%
!! AAGGGACTGCAATTTTGAAG+GGG + chr4_4:65491716-65491735 None:intergenic 40.0%
! CAAGGGACTGCAATTTTGAA+GGG + chr4_4:65491717-65491736 None:intergenic 40.0%
! TCAAGGGACTGCAATTTTGA+AGG + chr4_4:65491718-65491737 None:intergenic 40.0%
! CTCACGTATCCGTAAGTTTT+TGG - chr4_4:65491768-65491787 Msa0695800:CDS 40.0%
AGGCCACTTCCAAAAACTTA+CGG + chr4_4:65491780-65491799 None:intergenic 40.0%
CCGCAGATATTGTAAGATAC+TGG + chr4_4:65491875-65491894 None:intergenic 40.0%
!! AACCCTATAAGTTGGTTGCA+AGG + chr4_4:65492004-65492023 None:intergenic 40.0%
AACCAACTTATAGGGTTCTC+TGG - chr4_4:65492007-65492026 Msa0695800:CDS 40.0%
ACCAACTTATAGGGTTCTCT+GGG - chr4_4:65492008-65492027 Msa0695800:CDS 40.0%
GTTAAAGGCTCAAGCTGAAA+AGG - chr4_4:65492191-65492210 Msa0695800:intron 40.0%
!! AAGTGTGATGGATGTTGTGA+AGG - chr4_4:65492416-65492435 Msa0695800:intron 40.0%
GACATTCAATTACAGACTGC+AGG + chr4_4:65492606-65492625 None:intergenic 40.0%
CTCATTGCTTTGCACTTTCT+TGG - chr4_4:65492642-65492661 Msa0695800:intron 40.0%
! TTTTGCAAAGATCCAAAGGG+AGG - chr4_4:65492702-65492721 Msa0695800:intron 40.0%
TAGACGTGAAACGATGCTTA+TGG - chr4_4:65492738-65492757 Msa0695800:intron 40.0%
TGAAACGATGCTTATGGCAA+AGG - chr4_4:65492744-65492763 Msa0695800:intron 40.0%
TTGCATCCTCTAACTCTTGT+TGG + chr4_4:65492783-65492802 None:intergenic 40.0%
AAGATTGTTTCATCATCCCC+AGG + chr4_4:65493048-65493067 None:intergenic 40.0%
TGGGGATGATGAAACAATCT+TGG - chr4_4:65493047-65493066 Msa0695800:intron 40.0%
! ACTCTGTTTTCTTCCTTGAC+AGG + chr4_4:65493239-65493258 None:intergenic 40.0%
TGTCAAGGAAGAAAACAGAG+TGG - chr4_4:65493238-65493257 Msa0695800:CDS 40.0%
! CTTATCTAGTGAGTTGGGAA+CGG - chr4_4:65493301-65493320 Msa0695800:CDS 40.0%
TTGGGATAAGACAGTTAGAG+CGG - chr4_4:65493324-65493343 Msa0695800:CDS 40.0%
!!! GCCCCAAACATAGAGTTTTT+TGG - chr4_4:65493579-65493598 Msa0695800:CDS 40.0%
TTGGATATATCCAATAGCGG+AGG - chr4_4:65493598-65493617 Msa0695800:CDS 40.0%
! TGGATATATCCAATAGCGGA+GGG - chr4_4:65493599-65493618 Msa0695800:CDS 40.0%
! GGGAGTATGTAAATAGCTAG+AGG - chr4_4:65493619-65493638 Msa0695800:CDS 40.0%
TTAGTAAGAATTGGGGCATG+TGG - chr4_4:65493680-65493699 Msa0695800:CDS 40.0%
ACATTCAAGACCCAACAGAT+TGG + chr4_4:65493920-65493939 None:intergenic 40.0%
TCTGTACACTAACGCTTTGA+AGG - chr4_4:65493951-65493970 Msa0695800:CDS 40.0%
AACCACTGAATGGAAAATCC+CGG - chr4_4:65494036-65494055 Msa0695800:CDS 40.0%
TGTTCATCTCTAAGTTACCC+CGG + chr4_4:65494058-65494077 None:intergenic 40.0%
TTAGAGATGAACAGCAGCAA+TGG - chr4_4:65494065-65494084 Msa0695800:CDS 40.0%
AAGAATACTGTGGATCTACG+AGG - chr4_4:65494122-65494141 Msa0695800:CDS 40.0%
CTTATTGCAATAGGGGAATG+AGG + chr4_4:65494360-65494379 None:intergenic 40.0%
GCTTGCTTATTCTTTACAGG+AGG - chr4_4:65494422-65494441 Msa0695800:intron 40.0%
GGGAGATCATAACAGAGAAT+AGG - chr4_4:65494649-65494668 Msa0695800:intron 40.0%
AAAGAGGAGAACAAACGTAC+CGG + chr4_4:65494789-65494808 None:intergenic 40.0%
TTTGCAGGGTGAAAAGATCA+AGG - chr4_4:65494874-65494893 Msa0695800:intron 40.0%
GCTCTTGACAGTTTCTTCAA+CGG + chr4_4:65494988-65495007 None:intergenic 40.0%
GAACAAGGTGGAACTTATCA+TGG + chr4_4:65495025-65495044 None:intergenic 40.0%
TATCAGTATGCACCAAAGAC+AGG + chr4_4:65495334-65495353 None:intergenic 40.0%
! TGTCTTTGGTGCATACTGAT+AGG - chr4_4:65495333-65495352 Msa0695800:CDS 40.0%
GCATACTGATAGGATAGCTA+AGG - chr4_4:65495343-65495362 Msa0695800:CDS 40.0%
! GTTTGTTGATGGGGATGAAG+AGG + chr4_4:65489354-65489373 None:intergenic 45.0%
!! GGATTGAGGGTTTGTTGATG+GGG + chr4_4:65489363-65489382 None:intergenic 45.0%
!! GGGATTGAGGGTTTGTTGAT+GGG + chr4_4:65489364-65489383 None:intergenic 45.0%
!! AGGGATTGAGGGTTTGTTGA+TGG + chr4_4:65489365-65489384 None:intergenic 45.0%
AAGGTTTGAAGGAGAAGCGA+GGG + chr4_4:65489384-65489403 None:intergenic 45.0%
GTAGCAGAAGCAAGGTTTGA+AGG + chr4_4:65489395-65489414 None:intergenic 45.0%
!!! GAGTTTTGAGGCTATCGGAT+TGG + chr4_4:65489438-65489457 None:intergenic 45.0%
TGCTGAGAGTTGCTTGCATA+TGG + chr4_4:65489473-65489492 None:intergenic 45.0%
!! AGAAGCTTTTGGCTGTCTGT+TGG + chr4_4:65489559-65489578 None:intergenic 45.0%
!! ATTCTCTCCGTTGCTGTTTC+CGG - chr4_4:65489652-65489671 Msa0695800:three_prime_UTR 45.0%
CAATCTACCGGAAACAGCAA+CGG + chr4_4:65489662-65489681 None:intergenic 45.0%
AAGCTATCCTCGAGAGATGA+TGG - chr4_4:65489961-65489980 Msa0695800:three_prime_UTR 45.0%
TGATGGAAACTGATTGGGAG+AGG + chr4_4:65490041-65490060 None:intergenic 45.0%
!! AGCTCTATTGCTATTTCGCG+GGG + chr4_4:65490078-65490097 None:intergenic 45.0%
TGATAGAGCAAGTGAAGACC+TGG - chr4_4:65490700-65490719 Msa0695800:three_prime_UTR 45.0%
!!! TCGTCTCAAATTTTTCGGGC+TGG - chr4_4:65490785-65490804 Msa0695800:three_prime_UTR 45.0%
!!! CGTCTCAAATTTTTCGGGCT+GGG - chr4_4:65490786-65490805 Msa0695800:three_prime_UTR 45.0%
!!! GTCTCAAATTTTTCGGGCTG+GGG - chr4_4:65490787-65490806 Msa0695800:three_prime_UTR 45.0%
!!! TCTCAAATTTTTCGGGCTGG+GGG - chr4_4:65490788-65490807 Msa0695800:three_prime_UTR 45.0%
GCCTATGCTCAATGGATGAA+TGG - chr4_4:65491112-65491131 Msa0695800:three_prime_UTR 45.0%
CCCATTCATCCATTGAGCAT+AGG + chr4_4:65491116-65491135 None:intergenic 45.0%
!! TGTTTTCTAGAGACGACTCC+AGG + chr4_4:65491264-65491283 None:intergenic 45.0%
! TAGATCTGGAACTAGAGTGG+TGG - chr4_4:65491408-65491427 Msa0695800:three_prime_UTR 45.0%
GTCATCTCAGGACCTAATAC+TGG - chr4_4:65491430-65491449 Msa0695800:three_prime_UTR 45.0%
ATCTCAGGACCTAATACTGG+AGG - chr4_4:65491433-65491452 Msa0695800:three_prime_UTR 45.0%
TCTCAGGACCTAATACTGGA+GGG - chr4_4:65491434-65491453 Msa0695800:three_prime_UTR 45.0%
! GCAGTTTTCCCTCCAGTATT+AGG + chr4_4:65491445-65491464 None:intergenic 45.0%
TTCAATGAAAACGTTGGGCC+TGG - chr4_4:65491465-65491484 Msa0695800:three_prime_UTR 45.0%
GCAAGGATAAGGTCAAACCA+AGG + chr4_4:65491547-65491566 None:intergenic 45.0%
GGTGATCTCCAATATCTGCA+AGG + chr4_4:65491564-65491583 None:intergenic 45.0%
TGCAGATATTGGAGATCACC+AGG - chr4_4:65491564-65491583 Msa0695800:CDS 45.0%
AGTGGAACTGATCCTTCAGA+AGG - chr4_4:65491835-65491854 Msa0695800:CDS 45.0%
AACTGATCCTTCAGAAGGTG+TGG - chr4_4:65491840-65491859 Msa0695800:CDS 45.0%
TCTGCGGGAACATGTTAACT+TGG - chr4_4:65491888-65491907 Msa0695800:CDS 45.0%
! TGCCGCAATGGAATTTTCAC+TGG - chr4_4:65491975-65491994 Msa0695800:CDS 45.0%
CCAACTTATAGGGTTCTCTG+GGG - chr4_4:65492009-65492028 Msa0695800:CDS 45.0%
GCTCTATCAGTCATTACAGG+AGG - chr4_4:65492158-65492177 Msa0695800:intron 45.0%
!! GCCGTTATTTCTGGGGAAAA+TGG - chr4_4:65492553-65492572 Msa0695800:intron 45.0%
AAGGAAAAGAGTGAGGGAGA+CGG + chr4_4:65492676-65492695 None:intergenic 45.0%
GCATCGTTTCACGTCTATCA+AGG + chr4_4:65492735-65492754 None:intergenic 45.0%
TATGGCAAAGGAAGCTCAAC+AGG - chr4_4:65492756-65492775 Msa0695800:intron 45.0%
ACAGGTCCAACAAGAGTTAG+AGG - chr4_4:65492774-65492793 Msa0695800:intron 45.0%
AAAGCTCATACTCCTGCTGT+TGG - chr4_4:65492916-65492935 Msa0695800:intron 45.0%
GTTGCAGGATTCTTTGCACT+TGG + chr4_4:65493129-65493148 None:intergenic 45.0%
! AACTAGTTCTCCCACTCATC+AGG - chr4_4:65493146-65493165 Msa0695800:intron 45.0%
! ACTAGTTCTCCCACTCATCA+GGG - chr4_4:65493147-65493166 Msa0695800:intron 45.0%
GATAAGACAGTTAGAGCGGA+AGG - chr4_4:65493328-65493347 Msa0695800:CDS 45.0%
TTACATACTCCCTCCGCTAT+TGG + chr4_4:65493611-65493630 None:intergenic 45.0%
AAATAGCTAGAGGGGTTGAG+AGG - chr4_4:65493629-65493648 Msa0695800:CDS 45.0%
AATAGCTAGAGGGGTTGAGA+GGG - chr4_4:65493630-65493649 Msa0695800:CDS 45.0%
ATTTGCACCTGCCAATCTGT+TGG - chr4_4:65493906-65493925 Msa0695800:CDS 45.0%
TTTGCACCTGCCAATCTGTT+GGG - chr4_4:65493907-65493926 Msa0695800:CDS 45.0%
ACCACTGAATGGAAAATCCC+GGG - chr4_4:65494037-65494056 Msa0695800:CDS 45.0%
GTTCATCTCTAAGTTACCCC+GGG + chr4_4:65494057-65494076 None:intergenic 45.0%
TTCTTAGATGTTTGCACCGC+TGG + chr4_4:65494107-65494126 None:intergenic 45.0%
TAATACATGGGATGGGCACT+GGG - chr4_4:65494219-65494238 Msa0695800:intron 45.0%
GGTTCAAAATGAGTGACACG+AGG + chr4_4:65494284-65494303 None:intergenic 45.0%
GCAATAAGCTAACAGCAGCT+TGG - chr4_4:65494372-65494391 Msa0695800:intron 45.0%
AAAATACCCTCGCCAAAAGC+AGG + chr4_4:65494399-65494418 None:intergenic 45.0%
GAAGGGTGAAGCTAATGAGT+AGG + chr4_4:65494688-65494707 None:intergenic 45.0%
TTCTCATTCACACACACCTC+CGG - chr4_4:65494767-65494786 Msa0695800:intron 45.0%
TGAAGAAACTGTCAAGAGCG+TGG - chr4_4:65494989-65495008 Msa0695800:CDS 45.0%
AGGTGGAACTTATCATGGAC+AGG + chr4_4:65495020-65495039 None:intergenic 45.0%
! GTGGTGGTCTTGATTGGTAT+CGG + chr4_4:65495069-65495088 None:intergenic 45.0%
TTCTCCACTCGATGGAACAT+CGG + chr4_4:65495221-65495240 None:intergenic 45.0%
GTACTTCTCCTTGCAATACG+CGG + chr4_4:65495261-65495280 None:intergenic 45.0%
CACCAAAGACAGGTACGATT+AGG + chr4_4:65495324-65495343 None:intergenic 45.0%
AGGTTGCAGGTGAGTTGCAT+CGG + chr4_4:65489334-65489353 None:intergenic 50.0%
AAGGAGAAGCGAGGGATTGA+GGG + chr4_4:65489376-65489395 None:intergenic 50.0%
CAAGGTTTGAAGGAGAAGCG+AGG + chr4_4:65489385-65489404 None:intergenic 50.0%
TCGGTTGAGTAGCAGAAGCA+AGG + chr4_4:65489403-65489422 None:intergenic 50.0%
! GGATTGGACTGAGTTGGACT+CGG + chr4_4:65489422-65489441 None:intergenic 50.0%
! GCTATCGGATTGGACTGAGT+TGG + chr4_4:65489428-65489447 None:intergenic 50.0%
TTGAGGAATGAGTCTGGCAG+CGG + chr4_4:65489593-65489612 None:intergenic 50.0%
TCTTCGAACGGTGCAAAGCT+CGG + chr4_4:65489695-65489714 None:intergenic 50.0%
AGCAGCGAGTGTTCTTCGAA+CGG + chr4_4:65489707-65489726 None:intergenic 50.0%
AAGAACACTCGCTGCTTCCA+GGG - chr4_4:65489711-65489730 Msa0695800:three_prime_UTR 50.0%
TTCGATAAGCTGTGCGACCA+AGG - chr4_4:65490253-65490272 Msa0695800:three_prime_UTR 50.0%
! CGTCGATCTAGAATGTGCGT+GGG - chr4_4:65490836-65490855 Msa0695800:three_prime_UTR 50.0%
TAGAATGTGCGTGGGCATCA+GGG - chr4_4:65490844-65490863 Msa0695800:three_prime_UTR 50.0%
CAAGAGCTGCCTATGCTCAA+TGG - chr4_4:65491104-65491123 Msa0695800:three_prime_UTR 50.0%
TATGCGGCATCCATTACTCC+TGG - chr4_4:65491243-65491262 Msa0695800:three_prime_UTR 50.0%
AGAGACGACTCCAGGAGTAA+TGG + chr4_4:65491256-65491275 None:intergenic 50.0%
! GCTTCTAAAAGCGCGTCACA+AGG - chr4_4:65491349-65491368 Msa0695800:three_prime_UTR 50.0%
ACTAGAGTGGTGGTCATCTC+AGG - chr4_4:65491418-65491437 Msa0695800:three_prime_UTR 50.0%
GAAAGAGCCACACCTTCTGA+AGG + chr4_4:65491850-65491869 None:intergenic 50.0%
CCCCAGAGAACCCTATAAGT+TGG + chr4_4:65492012-65492031 None:intergenic 50.0%
! AGGGTTCTCTGGGGATGTAT+CGG - chr4_4:65492018-65492037 Msa0695800:CDS 50.0%
TGACCATGCACAAAAGTGGG+TGG - chr4_4:65492095-65492114 Msa0695800:intron 50.0%
!! TCTCCACCCACTTTTGTGCA+TGG + chr4_4:65492101-65492120 None:intergenic 50.0%
AACCAGAACAGCAGCAAGAG+CGG - chr4_4:65492127-65492146 Msa0695800:intron 50.0%
! CGGACTTGCTCTCCAAATTG+TGG + chr4_4:65492982-65493001 None:intergenic 50.0%
CAAGTCCGTGTGAAGGGATT+GGG - chr4_4:65492994-65493013 Msa0695800:intron 50.0%
TTCCTCCCAATCCCTTCACA+CGG + chr4_4:65493002-65493021 None:intergenic 50.0%
GGGAGGAAAATTAGCCACAG+TGG - chr4_4:65493014-65493033 Msa0695800:intron 50.0%
CCACAGTGGTAGAATTGCCT+GGG - chr4_4:65493028-65493047 Msa0695800:intron 50.0%
CACAGTGGTAGAATTGCCTG+GGG - chr4_4:65493029-65493048 Msa0695800:intron 50.0%
GCAGGATTCTTTGCACTTGG+TGG + chr4_4:65493126-65493145 None:intergenic 50.0%
TGAGTGGGAGAACTAGTTGC+AGG + chr4_4:65493144-65493163 None:intergenic 50.0%
ACCTGCTTTCCCTGATGAGT+GGG + chr4_4:65493159-65493178 None:intergenic 50.0%
TACCTGCTTTCCCTGATGAG+TGG + chr4_4:65493160-65493179 None:intergenic 50.0%
! TCTAGTGAGTTGGGAACGGT+TGG - chr4_4:65493305-65493324 Msa0695800:CDS 50.0%
! CTAGTGAGTTGGGAACGGTT+GGG - chr4_4:65493306-65493325 Msa0695800:CDS 50.0%
TCAAGACCCAACAGATTGGC+AGG + chr4_4:65493916-65493935 None:intergenic 50.0%
CCACTGAATGGAAAATCCCG+GGG - chr4_4:65494038-65494057 Msa0695800:CDS 50.0%
AGCTGCGATCCATCTTGAGA+TGG - chr4_4:65494160-65494179 Msa0695800:intron 50.0%
! CGCTGATTGCCATCTCAAGA+TGG + chr4_4:65494172-65494191 None:intergenic 50.0%
GTAATACATGGGATGGGCAC+TGG - chr4_4:65494218-65494237 Msa0695800:intron 50.0%
! AATACATGGGATGGGCACTG+GGG - chr4_4:65494220-65494239 Msa0695800:intron 50.0%
TCTTCAACGGTCTTGATGCC+CGG + chr4_4:65494975-65494994 None:intergenic 50.0%
! AGAAACTGTCAAGAGCGTGG+TGG - chr4_4:65494992-65495011 Msa0695800:CDS 50.0%
! GAAACTGTCAAGAGCGTGGT+GGG - chr4_4:65494993-65495012 Msa0695800:CDS 50.0%
! AAACTGTCAAGAGCGTGGTG+GGG - chr4_4:65494994-65495013 Msa0695800:CDS 50.0%
!! CTTGATTGGTATCGGTGTGG+CGG + chr4_4:65495061-65495080 None:intergenic 50.0%
!! GGTCTTGATTGGTATCGGTG+TGG + chr4_4:65495064-65495083 None:intergenic 50.0%
! AGCACAGTGGTGGTCTTGAT+TGG + chr4_4:65495075-65495094 None:intergenic 50.0%
AATCAAGACCACCACTGTGC+TGG - chr4_4:65495074-65495093 Msa0695800:CDS 50.0%
ATCAAGACCACCACTGTGCT+GGG - chr4_4:65495075-65495094 Msa0695800:CDS 50.0%
CAACTGCATTCTCCACTCGA+TGG + chr4_4:65495229-65495248 None:intergenic 50.0%
!! GATTATTGGTGCCGCAGAGA+AGG - chr4_4:65495289-65495308 Msa0695800:CDS 50.0%
GGCCTAATCGTACCTGTCTT+TGG - chr4_4:65495319-65495338 Msa0695800:CDS 50.0%
GATGGGGATGAAGAGGTTGC+AGG + chr4_4:65489347-65489366 None:intergenic 55.0%
GAAGGAGAAGCGAGGGATTG+AGG + chr4_4:65489377-65489396 None:intergenic 55.0%
AACAACGCCCGTTTACCCGT+CGG - chr4_4:65489526-65489545 Msa0695800:three_prime_UTR 55.0%
AGTACGTCCGACGGGTAAAC+GGG + chr4_4:65489536-65489555 None:intergenic 55.0%
GAGTACGTCCGACGGGTAAA+CGG + chr4_4:65489537-65489556 None:intergenic 55.0%
TCTGTTGGAGTACGTCCGAC+GGG + chr4_4:65489544-65489563 None:intergenic 55.0%
GTCTGTTGGAGTACGTCCGA+CGG + chr4_4:65489545-65489564 None:intergenic 55.0%
CTTCGAACGGTGCAAAGCTC+GGG + chr4_4:65489694-65489713 None:intergenic 55.0%
GAAGAACACTCGCTGCTTCC+AGG - chr4_4:65489710-65489729 Msa0695800:three_prime_UTR 55.0%
! GCGTCGATCTAGAATGTGCG+TGG - chr4_4:65490835-65490854 Msa0695800:three_prime_UTR 55.0%
CTAGAATGTGCGTGGGCATC+AGG - chr4_4:65490843-65490862 Msa0695800:three_prime_UTR 55.0%
TGGGCATCAGGGCTTCGTAT+AGG - chr4_4:65490855-65490874 Msa0695800:three_prime_UTR 55.0%
! GTTCTGAATGCCAGCAGCTC+TGG - chr4_4:65490899-65490918 Msa0695800:three_prime_UTR 55.0%
GTATGTTGCTCCAGAGCTGC+TGG + chr4_4:65490912-65490931 None:intergenic 55.0%
!! TTCAAACTCTGAAGCGGCCG+AGG - chr4_4:65490982-65491001 Msa0695800:three_prime_UTR 55.0%
CAATGACATTGCGGTCGTGC+AGG - chr4_4:65491192-65491211 Msa0695800:three_prime_UTR 55.0%
CTTGGCAGGCAGATGCATTC+CGG + chr4_4:65491509-65491528 None:intergenic 55.0%
TGAGGCACGGCATGATGTGT+TGG + chr4_4:65492450-65492469 None:intergenic 55.0%
TCTTGGCTATCCCCGAGGAT+TGG + chr4_4:65492484-65492503 None:intergenic 55.0%
GAGTGAGGGAGACGGATAGA+CGG + chr4_4:65492668-65492687 None:intergenic 55.0%
CAAGGTCTTCTGCCTCCCTT+TGG + chr4_4:65492717-65492736 None:intergenic 55.0%
CTGATGGGAGAACCAACAGC+AGG + chr4_4:65492931-65492950 None:intergenic 55.0%
!! GCTGTTGGTTCTCCCATCAG+TGG - chr4_4:65492931-65492950 Msa0695800:intron 55.0%
ATGCGATCAGCGCCACTGAT+GGG + chr4_4:65492946-65492965 None:intergenic 55.0%
AATGCGATCAGCGCCACTGA+TGG + chr4_4:65492947-65492966 None:intergenic 55.0%
TGGAGAGCAAGTCCGTGTGA+AGG - chr4_4:65492987-65493006 Msa0695800:intron 55.0%
GGAGAGCAAGTCCGTGTGAA+GGG - chr4_4:65492988-65493007 Msa0695800:intron 55.0%
GCAAGTCCGTGTGAAGGGAT+TGG - chr4_4:65492993-65493012 Msa0695800:intron 55.0%
GCCACAGTGGTAGAATTGCC+TGG - chr4_4:65493027-65493046 Msa0695800:intron 55.0%
CCCAGGCAATTCTACCACTG+TGG + chr4_4:65493031-65493050 None:intergenic 55.0%
TCCCACTCATCAGGGAAAGC+AGG - chr4_4:65493155-65493174 Msa0695800:intron 55.0%
! CCCCGGGATTTTCCATTCAG+TGG + chr4_4:65494041-65494060 None:intergenic 55.0%
GGATCTACGAGGTATGCGAC+TGG - chr4_4:65494133-65494152 Msa0695800:CDS 55.0%
! CAGCAGCTTGGACCTGCTTT+TGG - chr4_4:65494384-65494403 Msa0695800:intron 55.0%
!! CTTGGACCTGCTTTTGGCGA+GGG - chr4_4:65494390-65494409 Msa0695800:intron 55.0%
GAGGAGAACAAACGTACCGG+AGG + chr4_4:65494786-65494805 None:intergenic 55.0%
ATGCGGTTCAACGCCGTCTA+CGG - chr4_4:65494918-65494937 Msa0695800:intron 55.0%
CTCCTTGGCGTATCCGTAGA+CGG + chr4_4:65494934-65494953 None:intergenic 55.0%
! GAGCTCATTGGAGCACTCCT+TGG + chr4_4:65494949-65494968 None:intergenic 55.0%
!! AGGAGTGCTCCAATGAGCTC+AGG - chr4_4:65494949-65494968 Msa0695800:intron 55.0%
GGATCTCATCGGGAACAAGG+TGG + chr4_4:65495037-65495056 None:intergenic 55.0%
GGAGGATCTCATCGGGAACA+AGG + chr4_4:65495040-65495059 None:intergenic 55.0%
TTCAGAGACGGTGCCTACGT+TGG + chr4_4:65495117-65495136 None:intergenic 55.0%
! CGTAGGCACCGTCTCTGAAA+TGG - chr4_4:65495118-65495137 Msa0695800:CDS 55.0%
!! AGGCACCGTCTCTGAAATGG+CGG - chr4_4:65495121-65495140 Msa0695800:CDS 55.0%
CCTCACCGCCATTTCAGAGA+CGG + chr4_4:65495129-65495148 None:intergenic 55.0%
GTCTCCGATGTTCCATCGAG+TGG - chr4_4:65495214-65495233 Msa0695800:CDS 55.0%
GGAGAATGCAGTTGCGCCAA+AGG - chr4_4:65495235-65495254 Msa0695800:CDS 55.0%
TCCTTGCAATACGCGGCCTT+TGG + chr4_4:65495254-65495273 None:intergenic 55.0%
TGCCGCAGAGAAGGAACGTA+AGG - chr4_4:65495298-65495317 Msa0695800:CDS 55.0%
GGCCTTACGTTCCTTCTCTG+CGG + chr4_4:65495303-65495322 None:intergenic 55.0%
! GCAGGTGAGTTGCATCGGTG+TGG + chr4_4:65489329-65489348 None:intergenic 60.0%
! TAAACGGGCGTTGTTGGCGG+CGG + chr4_4:65489521-65489540 None:intergenic 60.0%
! GGGTAAACGGGCGTTGTTGG+CGG + chr4_4:65489524-65489543 None:intergenic 60.0%
! GACGGGTAAACGGGCGTTGT+TGG + chr4_4:65489527-65489546 None:intergenic 60.0%
AGGAATGAGTCTGGCAGCGG+AGG + chr4_4:65489590-65489609 None:intergenic 60.0%
!! TCCTAATGGGCTTGGAGCGC+AGG - chr4_4:65490639-65490658 Msa0695800:three_prime_UTR 60.0%
TCCTGCGCTCCAAGCCCATT+AGG + chr4_4:65490643-65490662 None:intergenic 60.0%
CTCCGCTCTTGCTGCTGTTC+TGG + chr4_4:65492132-65492151 None:intergenic 60.0%
GAACAGCAGCAAGAGCGGAG+AGG - chr4_4:65492132-65492151 Msa0695800:intron 60.0%
ACAGCTCTTGGCTATCCCCG+AGG + chr4_4:65492489-65492508 None:intergenic 60.0%
GTCCGTGTGAAGGGATTGGG+AGG - chr4_4:65492997-65493016 Msa0695800:intron 60.0%
AGGGGTTGAGAGGGAGAGAC+CGG - chr4_4:65493639-65493658 Msa0695800:CDS 60.0%
!! GCTTGGACCTGCTTTTGGCG+AGG - chr4_4:65494389-65494408 Msa0695800:intron 60.0%
! AGACGGCGTTGAACCGCATG+AGG + chr4_4:65494917-65494936 None:intergenic 60.0%
GTGCTCCAATGAGCTCAGGC+CGG - chr4_4:65494953-65494972 Msa0695800:intron 60.0%
TGCTCCAATGAGCTCAGGCC+GGG - chr4_4:65494954-65494973 Msa0695800:intron 60.0%
! GTGTGGCGGAGGATCTCATC+GGG + chr4_4:65495047-65495066 None:intergenic 60.0%
! GGTGTGGCGGAGGATCTCAT+CGG + chr4_4:65495048-65495067 None:intergenic 60.0%
!! GATTGGTATCGGTGTGGCGG+AGG + chr4_4:65495058-65495077 None:intergenic 60.0%
ACGGTGCCTACGTTGGCAAC+GGG + chr4_4:65495110-65495129 None:intergenic 60.0%
GACGGTGCCTACGTTGGCAA+CGG + chr4_4:65495111-65495130 None:intergenic 60.0%
!! CCGTCTCTGAAATGGCGGTG+AGG - chr4_4:65495126-65495145 Msa0695800:CDS 60.0%
TTACTCCAAGTGCGAGCCCG+TGG - chr4_4:65495151-65495170 Msa0695800:CDS 60.0%
AGCCACAGTCTGCTCTGCCA+CGG + chr4_4:65495171-65495190 None:intergenic 60.0%
GGCAGAGCAGACTGTGGCTT+CGG - chr4_4:65495172-65495191 Msa0695800:CDS 60.0%
GCCAAAGGCCGCGTATTGCA+AGG - chr4_4:65495250-65495269 Msa0695800:CDS 60.0%
GGCGGAGGAGCCCATTGAAG+TGG + chr4_4:65489503-65489522 None:intergenic 65.0%
CGCCGTCTACGGATACGCCA+AGG - chr4_4:65494929-65494948 Msa0695800:intron 65.0%
GATGCCCGGCCTGAGCTCAT+TGG + chr4_4:65494961-65494980 None:intergenic 65.0%
ACCACCACTGTGCTGGGCAC+AGG - chr4_4:65495081-65495100 Msa0695800:CDS 65.0%
CCACCACTGTGCTGGGCACA+GGG - chr4_4:65495082-65495101 Msa0695800:CDS 65.0%
AGGGCTCCCGTTGCCAACGT+AGG - chr4_4:65495101-65495120 Msa0695800:CDS 65.0%
GCCACAGTCTGCTCTGCCAC+GGG + chr4_4:65495170-65495189 None:intergenic 65.0%
AGCAGACTGTGGCTTCGGCG+TGG - chr4_4:65495177-65495196 Msa0695800:CDS 65.0%
TGTGGCTTCGGCGTGGCAGA+AGG - chr4_4:65495184-65495203 Msa0695800:CDS 65.0%
CCCTGTGCCCAGCACAGTGG+TGG + chr4_4:65495085-65495104 None:intergenic 70.0%
GAGCCCTGTGCCCAGCACAG+TGG + chr4_4:65495088-65495107 None:intergenic 70.0%
CTCTGCCACGGGCTCGCACT+TGG + chr4_4:65495159-65495178 None:intergenic 70.0%
GCCCGTGGCAGAGCAGACTG+TGG - chr4_4:65495166-65495185 Msa0695800:CDS 70.0%
! ACGGGCGTTGTTGGCGGCGG+AGG + chr4_4:65489518-65489537 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 65489265 65495507 65489265 ID=Msa0695800;Name=Msa0695800
chr4_4 mRNA 65489265 65495507 65489265 ID=Msa0695800-mRNA-1;Parent=Msa0695800;Name=Msa0695800-mRNA-1;_AED=0.07;_eAED=0.07;_QI=69|0.5|1|1|0.5|0.33|3|2295|645
chr4_4 exon 65489265 65492060 65489265 ID=Msa0695800-mRNA-1:exon:18933;Parent=Msa0695800-mRNA-1
chr4_4 exon 65493187 65494171 65493187 ID=Msa0695800-mRNA-1:exon:18932;Parent=Msa0695800-mRNA-1
chr4_4 exon 65494987 65495507 65494987 ID=Msa0695800-mRNA-1:exon:18931;Parent=Msa0695800-mRNA-1
chr4_4 five_prime_UTR 65495439 65495507 65495439 ID=Msa0695800-mRNA-1:five_prime_utr;Parent=Msa0695800-mRNA-1
chr4_4 CDS 65494987 65495438 65494987 ID=Msa0695800-mRNA-1:cds;Parent=Msa0695800-mRNA-1
chr4_4 CDS 65493187 65494171 65493187 ID=Msa0695800-mRNA-1:cds;Parent=Msa0695800-mRNA-1
chr4_4 CDS 65491560 65492060 65491560 ID=Msa0695800-mRNA-1:cds;Parent=Msa0695800-mRNA-1
chr4_4 three_prime_UTR 65489265 65491559 65489265 ID=Msa0695800-mRNA-1:three_prime_utr;Parent=Msa0695800-mRNA-1
Gene Sequence

>Msa0695800

ATGCAACTCACCTGCAACCTCTTCATCCCCATCAACAAACCCTCAATCCCTCGCTTCTCCTTCAAACCTTGCTTCTGCTACTCAACCGAGTCCAACTCAGTCCAATCCGATAGCCTCAAAACTCTCGAATGGAACTCCATATGCAAGCAACTCTCAGCATTCACTTCCACTTCAATGGGCTCCTCCGCCGCCAACAACGCCCGTTTACCCGTCGGACGTACTCCAACAGACAGCCAAAAGCTTCTCGATCAAACCTCCGCTGCCAGACTCATTCCTCAACAACAACTCGACTTTTCTGGAATACATGACTTGACTGACATTCTCTCCGTTGCTGTTTCCGGTAGATTGTTGACTATTCCCGAGCTTTGCACCGTTCGAAGAACACTCGCTGCTTCCAGGGAATTGTTTGATAGTTTGAAACACTTGGCTTCTGTATCTAATCATTCACACAGGTACTCACCCCTTCTTGAAATACTGCAAAATTGTAATTTCCTAATGGGCTTGGAGCGCAGGATAGAATTTTGCATAGATTGCAATCTTTTGGTAATTCTTGATAGAGCAAGTGAAGACCTGGAGATCATTAGATCAGAACGAAAAAGGAACATAGAAATCCTGGACTCTTTATTGAAGGAAGTATCGTCTCAAATTTTTCGGGCTGGGGGTATTGACAGACCATTTATTACTAAGCGTCGATCTAGAATGTGCGTGGGCATCAGGGCTTCGTATAGGTATTTGCTTCCAGAAGGTATAGTTCTGAATGCCAGCAGCTCTGGAGCAACATACTTTATGGAACCGAAAGAAGCAATAGATTTGAACAACATGGAAGTTAGGCTTTCAAACTCTGAAGCGGCCGAGGAAAGAGCAATTTTGAGTATGCTTGCATCTGAAATAGCAAATTCAGAATCAGAGATAAAATATTTGTTGGATAAAATTCTTGAGGTTGATCTTGCTTTTGCAAGAGCTGCCTATGCTCAATGGATGAATGGGGTATGTCCAATTTTCAGTTTAGGTACTCTTGGAGGTTGCAATTCTGTTGAAGAGGACAATGACATTGCGGTCGTGCAGGATGACGATTTAACAGTAAATATTGAGGGTATGCGGCATCCATTACTCCTGGAGTCGTCTCTAGAAAACATTTCAGATAATGTCACACTAAGGTCTGGAAATTCTTCTGAGTTGGGTAATGGAAATGGAACAATGGCTTCTAAAAGCGCGTCACAAGGCATAACAGACTTCCCTGTGCCAGTTGACTTCAAAATTAGATCTGGAACTAGAGTGGTGGTCATCTCAGGACCTAATACTGGAGGGAAAACTGCTTCAATGAAAACGTTGGGCCTGGCATCACTTATGTCAAAAGCCGGAATGCATCTGCCTGCCAAGAAAAGTCCAAAACTTCCTTGGTTTGACCTTATCCTTGCAGATATTGGAGATCACCAGATCCAAAGGGAGGCAGAAGACCTTGATAGACGTGAAACGATGCTTATGGCAAAGGAAGCTCAACAGGTCCAACAAGAGTTAGAGGATGCAAAATCTCAAATGGAAATTGTAATACAGAAATTCGAAAAGCAACTAAAAGATTTGGGACGCAACCAACTCAATTCAATAATTAAAGAATCTGAAACTGCAATTGCCTCCATTGTAAAAGCTCATACTCCTGCTGTTGGTTCTCCCATCAGTGGCGCTGATCGCATTACATCATATACTCCACAATTTGGAGAGCAAGTCCGTGTGAAGGGATTGGGAGGAAAATTAGCCACAGTGGTAGAATTGCCTGGGGATGATGAAACAATCTTGGTACAGTATGGTAAAGTGAAAGTACGTGTGAAGAAAAATCGCATCAGAGCTATTCCACCAAGTGCAAAGAATCCTGCAACTAGTTCTCCCACTCATCAGGGAAAGCAGGTATGTACAAAGAAATCTTTGCTGTCATATAAATAA
Protein sequence

>Msa0695800

MQLTCNLFIPINKPSIPRFSFKPCFCYSTESNSVQSDSLKTLEWNSICKQLSAFTSTSMGSSAANNARLPVGRTPTDSQKLLDQTSAARLIPQQQLDFSGIHDLTDILSVAVSGRLLTIPELCTVRRTLAASRELFDSLKHLASVSNHSHRYSPLLEILQNCNFLMGLERRIEFCIDCNLLVILDRASEDLEIIRSERKRNIEILDSLLKEVSSQIFRAGGIDRPFITKRRSRMCVGIRASYRYLLPEGIVLNASSSGATYFMEPKEAIDLNNMEVRLSNSEAAEERAILSMLASEIANSESEIKYLLDKILEVDLAFARAAYAQWMNGVCPIFSLGTLGGCNSVEEDNDIAVVQDDDLTVNIEGMRHPLLLESSLENISDNVTLRSGNSSELGNGNGTMASKSASQGITDFPVPVDFKIRSGTRVVVISGPNTGGKTASMKTLGLASLMSKAGMHLPAKKSPKLPWFDLILADIGDHQIQREAEDLDRRETMLMAKEAQQVQQELEDAKSQMEIVIQKFEKQLKDLGRNQLNSIIKESETAIASIVKAHTPAVGSPISGADRITSYTPQFGEQVRVKGLGGKLATVVELPGDDETILVQYGKVKVRVKKNRIRAIPPSAKNPATSSPTHQGKQVCTKKSLLSYK*