AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0538140


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0538140 MtrunA17_Chr4g0001381 97.252 473 12 1 1 473 1 472 0.0 958
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0538140 AT1G15980.1 74.588 425 105 3 50 472 37 460 0.0 639

Find 144 sgRNAs with CRISPR-Local

Find 227 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCAATGATTCAGTTGATTA+AGG 0.219521 4_1:-17282676 Msa0538140:CDS
GCTCCTGCGGCATTCACATT+TGG 0.256785 4_1:+17282140 None:intergenic
AGGGAAGAGAGCGAGGGTTC+TGG 0.276282 4_1:-17280335 Msa0538140:three_prime_UTR
CCTTTAGGATTGAAAGTTAG+AGG 0.300598 4_1:-17282759 Msa0538140:CDS
CATGATCTTGAGCACAAAAT+TGG 0.303971 4_1:-17282228 Msa0538140:CDS
TCAAGGGGTAGCAAGCTATC+AGG 0.307519 4_1:+17281601 None:intergenic
CAAGGTTCATTCTTGACTCT+TGG 0.314351 4_1:-17283386 Msa0538140:five_prime_UTR
GAAGTTTCCAGCTGGTTATA+TGG 0.315816 4_1:-17282793 Msa0538140:CDS
CTCCTGCGGCATTCACATTT+GGG 0.327274 4_1:+17282141 None:intergenic
AACGAACCATATTCGATATT+CGG 0.330076 4_1:+17282888 None:intergenic
AACTAATTCATGGTTTCCTT+CGG 0.332353 4_1:-17280246 Msa0538140:three_prime_UTR
AATCCATAGGGATTGTTGTT+TGG 0.334719 4_1:+17282819 None:intergenic
TTTGGATTATCCGGCGGCCT+TGG 0.336805 4_1:+17282837 None:intergenic
ACTAATTCATGGTTTCCTTC+GGG 0.337938 4_1:-17280245 Msa0538140:three_prime_UTR
AGGTGTTGTTGTGTGGTATC+AGG 0.338658 4_1:-17282726 Msa0538140:CDS
GTATATTATCAACTAATTCA+TGG 0.344540 4_1:-17280256 Msa0538140:three_prime_UTR
TCTGAAAGATTTGTACTATC+AGG 0.362004 4_1:+17282089 None:intergenic
TCCTTAATCAACTGAATCAT+TGG 0.362538 4_1:+17282675 None:intergenic
GGAAGATATGTTGTGATTCA+TGG 0.363892 4_1:-17281667 Msa0538140:CDS
ATGCTACACATAATACAAAA+AGG 0.369840 4_1:-17283264 Msa0538140:five_prime_UTR
TATTAAATCTCAAACCTTCA+AGG 0.370263 4_1:-17283404 Msa0538140:five_prime_UTR
TGAAAGTTAGAGGTGATGTT+AGG 0.374797 4_1:-17282749 Msa0538140:CDS
CTACAAAGTTAGACATGTTA+AGG 0.377437 4_1:+17283190 None:intergenic
AGGGGTGGTGATGAAGATTA+TGG 0.379763 4_1:+17281159 None:intergenic
TTTGTAGTGAAATGAGAAAA+TGG 0.386409 4_1:+17283068 None:intergenic
CGCTTAAAATATCACTTTCA+AGG 0.394527 4_1:-17281741 Msa0538140:CDS
AGTTGCAGCCATTGAATTTG+AGG 0.399232 4_1:+17283124 None:intergenic
GGATTGTTGTTTGGATTATC+CGG 0.400677 4_1:+17282828 None:intergenic
GAAGACCCGAATATCGAATA+TGG 0.403352 4_1:-17282894 Msa0538140:CDS
AATAAAAGTCGAGAAAGCTT+TGG 0.409938 4_1:-17280167 Msa0538140:three_prime_UTR
ATGGTTGAGATAGCTCCTTT+AGG 0.414492 4_1:-17282774 Msa0538140:CDS
CTCGCTCTCTTCCCTCTCTT+AGG 0.421657 4_1:+17280343 None:intergenic
AATGACTACCACTATAGTTA+AGG 0.423919 4_1:+17283327 None:intergenic
ATAAAAGTCGAGAAAGCTTT+GGG 0.424627 4_1:-17280166 Msa0538140:three_prime_UTR
ACGAACCATATTCGATATTC+GGG 0.425608 4_1:+17282889 None:intergenic
AGTTGAATAAGAATGTTAGA+TGG 0.432160 4_1:-17282593 Msa0538140:CDS
GTTTCGAAGCGTTCCACGGC+AGG 0.433283 4_1:-17281773 Msa0538140:CDS
TTTGAAAACCTCAAATTCAA+TGG 0.433427 4_1:-17283132 Msa0538140:exon
GTTAAAACTTATAGTAAAGA+TGG 0.433726 4_1:-17280282 Msa0538140:three_prime_UTR
GAGTCAAGAATGAACCTTGA+AGG 0.435503 4_1:+17283390 None:intergenic
AAATTTCAGCCCACACTTCA+AGG 0.435721 4_1:+17281584 None:intergenic
CAAAGGCCACAATGCAGTCT+AGG 0.436420 4_1:-17281630 Msa0538140:CDS
ATCGATCAACTTCCCCGTCT+TGG 0.442656 4_1:+17280429 None:intergenic
AATGTGAATGCCGCAGGAGC+AGG 0.445822 4_1:-17282137 Msa0538140:CDS
TTTCAAAACCTTAACTATAG+TGG 0.456211 4_1:-17283335 Msa0538140:five_prime_UTR
GGGTCTTCTCCATCGTCAAA+AGG 0.459837 4_1:+17282909 None:intergenic
GGTGTTCAGATTGATGTTGT+GGG 0.460104 4_1:-17282642 Msa0538140:CDS
GGCTCAGGAAACTCATCGTC+CGG 0.465768 4_1:+17282555 None:intergenic
TCATTCCACATGAGAAAGAA+AGG 0.469273 4_1:-17281216 Msa0538140:CDS
GAAAATGTTGAGGAAATAGT+TGG 0.470649 4_1:-17281193 Msa0538140:CDS
TGGTGTTCAGATTGATGTTG+TGG 0.478619 4_1:-17282643 Msa0538140:CDS
AAAGGCCACAATGCAGTCTA+GGG 0.479022 4_1:-17281629 Msa0538140:CDS
AGCACAAAATTGGCAGGAGT+TGG 0.480238 4_1:-17282218 Msa0538140:CDS
GGCTGCTCTTATTAATGACT+CGG 0.485516 4_1:-17280700 Msa0538140:CDS
ATCACTTTCAAGGAAGTTGA+AGG 0.487703 4_1:-17281731 Msa0538140:CDS
AATACACAAAAGCAGGTGTA+AGG 0.488855 4_1:-17281693 Msa0538140:CDS
CCTCTAACTTTCAATCCTAA+AGG 0.488882 4_1:+17282759 None:intergenic
AAGGAAGTTGAAGGAAGTTG+TGG 0.489133 4_1:-17281722 Msa0538140:CDS
CTGAAATTTCTGATGCTGTA+AGG 0.491782 4_1:-17281570 Msa0538140:intron
TCGAACTAGGTATCATCAAA+TGG 0.492338 4_1:-17281815 Msa0538140:intron
TCAGTATACTCAGCAGGCTC+AGG 0.500874 4_1:+17282540 None:intergenic
AAGTTAGAGGTGATGTTAGG+AGG 0.501313 4_1:-17282746 Msa0538140:CDS
CTTCATCACCACCCCTGGAC+AGG 0.503827 4_1:-17281152 Msa0538140:intron
ATAATCTTCATCACCACCCC+TGG 0.505329 4_1:-17281157 Msa0538140:CDS
GAAGATATGTTGTGATTCAT+GGG 0.506391 4_1:-17281666 Msa0538140:CDS
GGTCTTCTCCATCGTCAAAA+GGG 0.506897 4_1:+17282910 None:intergenic
AATCCAAACAACAATCCCTA+TGG 0.508106 4_1:-17282822 Msa0538140:CDS
ACATTGGTTGGATAAGTTGA+AGG 0.509188 4_1:+17283032 None:intergenic
GGGAAACAAGTTTGTTCCGC+GGG 0.509763 4_1:-17280482 Msa0538140:CDS
GCTTGCTACCCCTTGAAGTG+TGG 0.513132 4_1:-17281594 Msa0538140:CDS
ATCTCAACCATATAACCAGC+TGG 0.513445 4_1:+17282786 None:intergenic
GTTAACAATGAAACATTGGT+TGG 0.517797 4_1:+17283020 None:intergenic
AATTTCAGCCCACACTTCAA+GGG 0.518059 4_1:+17281585 None:intergenic
GTTGAATAAGAATGTTAGAT+GGG 0.518616 4_1:-17282592 Msa0538140:CDS
GGTATCATCAAATGGAAGAC+TGG 0.518755 4_1:-17281807 Msa0538140:CDS
ATCTTGAGCACAAAATTGGC+AGG 0.529810 4_1:-17282224 Msa0538140:CDS
GCAATCTTGTGCATGTGATA+AGG 0.531250 4_1:+17280066 None:intergenic
GGTTGGATAAGTTGAAGGAA+TGG 0.531381 4_1:+17283037 None:intergenic
CTTGCTACCCCTTGAAGTGT+GGG 0.533307 4_1:-17281593 Msa0538140:CDS
TGGAAACTTCAAGAATCCAT+AGG 0.533581 4_1:+17282806 None:intergenic
GGATACTTGAGTACCTGTCC+AGG 0.534087 4_1:+17281139 None:intergenic
TGAAGTTAACAATGAAACAT+TGG 0.536410 4_1:+17283016 None:intergenic
CTAATTCATGGTTTCCTTCG+GGG 0.539236 4_1:-17280244 Msa0538140:three_prime_UTR
GCTCTTATTAATGACTCGGC+TGG 0.543013 4_1:-17280696 Msa0538140:CDS
GGATTCTTGAAGTTTCCAGC+TGG 0.544542 4_1:-17282801 Msa0538140:CDS
CATTTCTTCTCTTCTGCCCG+CGG 0.544853 4_1:+17280466 None:intergenic
TGCCGTGGAACGCTTCGAAA+CGG 0.546185 4_1:+17281775 None:intergenic
GAAGTTGAAGGAAGTTGTGG+AGG 0.547515 4_1:-17281719 Msa0538140:CDS
GGCCGTTTCGAAGCGTTCCA+CGG 0.550376 4_1:-17281777 Msa0538140:CDS
GAGTTGAATTGCAGCTGTAT+TGG 0.552918 4_1:+17280662 None:intergenic
TACCCAAATGTGAATGCCGC+AGG 0.553467 4_1:-17282143 Msa0538140:CDS
ACAACATCAATCTGAACACC+AGG 0.556920 4_1:+17282645 None:intergenic
GAGGAGAAATACACAAAAGC+AGG 0.557750 4_1:-17281700 Msa0538140:CDS
CTAAGAGAGGGAAGAGAGCG+AGG 0.558962 4_1:-17280342 Msa0538140:three_prime_UTR
GTGGAAATGTGTTGGATAAG+TGG 0.559962 4_1:+17283229 None:intergenic
GATGTTGTGGGTTCTGAGAG+AGG 0.559979 4_1:-17282630 Msa0538140:CDS
GTAAACAAGACGAGGATCCA+AGG 0.561447 4_1:-17282854 Msa0538140:CDS
GAGAATGTGTGGAAATGTGT+TGG 0.561695 4_1:+17283221 None:intergenic
AAATGGAAGACTGGCTAGGA+AGG 0.564182 4_1:-17281798 Msa0538140:CDS
CAAATGCGCGCGAGAAACCT+AGG 0.564933 4_1:-17280638 Msa0538140:intron
TGATTCAGTTGATTAAGGAT+AGG 0.569315 4_1:-17282671 Msa0538140:CDS
TGTTAGGAGGTGTTGTTGTG+TGG 0.574160 4_1:-17282733 Msa0538140:CDS
ACAAAATCAGTATACTCAGC+AGG 0.575460 4_1:+17282534 None:intergenic
AGCGGTGGCACAACCTGCCG+TGG 0.576229 4_1:+17281760 None:intergenic
GAAAGAAAGGGAAAATGTTG+AGG 0.576655 4_1:-17281203 Msa0538140:CDS
CATTCCACATGAGAAAGAAA+GGG 0.577019 4_1:-17281215 Msa0538140:CDS
GTTGATCGATATAGATGTTG+AGG 0.578479 4_1:-17280416 Msa0538140:CDS
CATCAAATGGAAGACTGGCT+AGG 0.582960 4_1:-17281802 Msa0538140:CDS
GGAAACTTCAAGAATCCATA+GGG 0.585870 4_1:+17282807 None:intergenic
CATTGTGATATCATCCAAGA+CGG 0.586410 4_1:-17280443 Msa0538140:CDS
TTGATTAAGGATAGGTACCC+TGG 0.587419 4_1:-17282663 Msa0538140:CDS
CAAGGGGTAGCAAGCTATCA+GGG 0.589860 4_1:+17281602 None:intergenic
TGGAAATGTGTTGGATAAGT+GGG 0.591962 4_1:+17283230 None:intergenic
CAATGATCAATCTTCACTTG+TGG 0.592599 4_1:+17283299 None:intergenic
TGGGATACAATCAGACTCAA+AGG 0.593935 4_1:-17281647 Msa0538140:CDS
TCGTCAAAAGGGTCTAGCCA+TGG 0.597498 4_1:+17282921 None:intergenic
ACAAAAGCAGGTGTAAGGAA+AGG 0.598501 4_1:-17281688 Msa0538140:CDS
GTTGAATTGTAACAATGTGA+TGG 0.600380 4_1:+17282984 None:intergenic
ATGTTGTGGGTTCTGAGAGA+GGG 0.600619 4_1:-17282629 Msa0538140:CDS
ATTTCAGCCCACACTTCAAG+GGG 0.601739 4_1:+17281586 None:intergenic
ATTGTGATATCATCCAAGAC+GGG 0.603268 4_1:-17280442 Msa0538140:CDS
AGGACTAGAACGAGAATGTG+TGG 0.615003 4_1:+17283210 None:intergenic
GATAGTACAAATCTTTCAGA+GGG 0.616298 4_1:-17282086 Msa0538140:CDS
TCATGTGGAATGACGAAAAG+TGG 0.623202 4_1:+17281226 None:intergenic
GTCACCCCTAGACTGCATTG+TGG 0.624733 4_1:+17281624 None:intergenic
AGACGAGGATCCAAGGCCGC+CGG 0.626429 4_1:-17282847 Msa0538140:CDS
TGATAGTACAAATCTTTCAG+AGG 0.630937 4_1:-17282087 Msa0538140:CDS
AATTGTAACAATGTGATGGA+TGG 0.632372 4_1:+17282988 None:intergenic
TAAGAGAGGGAAGAGAGCGA+GGG 0.633267 4_1:-17280341 Msa0538140:three_prime_UTR
ATACTTGAGTACCTGTCCAG+GGG 0.635883 4_1:+17281141 None:intergenic
GATACTTGAGTACCTGTCCA+GGG 0.636884 4_1:+17281140 None:intergenic
AGGGAAACAAGTTTGTTCCG+CGG 0.637504 4_1:-17280483 Msa0538140:CDS
CTTGAGTACCTGTCCAGGGG+TGG 0.638966 4_1:+17281144 None:intergenic
AGTACAAATCTTTCAGAGGG+AGG 0.642667 4_1:-17282083 Msa0538140:CDS
TGTTGTTGTGTGGTATCAGG+TGG 0.644010 4_1:-17282723 Msa0538140:CDS
TTAAGTCGTTGTGCTAACTG+TGG 0.656651 4_1:-17280304 Msa0538140:three_prime_UTR
TTCAGACGGTAAACAAGACG+AGG 0.660676 4_1:-17282862 Msa0538140:CDS
GGTGGTGATGAAGATTATGG+AGG 0.661951 4_1:+17281162 None:intergenic
TTGTTGTTTGGATTATCCGG+CGG 0.666048 4_1:+17282831 None:intergenic
TCATGAATAAATATGCTGCA+TGG 0.676264 4_1:+17282195 None:intergenic
AAGGCCACAATGCAGTCTAG+GGG 0.695170 4_1:-17281628 Msa0538140:CDS
TTGTGATATCATCCAAGACG+GGG 0.707166 4_1:-17280441 Msa0538140:CDS
ATAGCTAACTCTATCTCGCG+CGG 0.710277 4_1:+17282169 None:intergenic
CAACATCAATCTGAACACCA+GGG 0.751591 4_1:+17282646 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATATTAGAAATTCTATAT+AGG - chr4_1:17281270-17281289 Msa0538140:intron 10.0%
!! AATATTGAAAAAGAAAAATA+AGG - chr4_1:17282570-17282589 Msa0538140:CDS 10.0%
!! ATATTGAAAAAGAAAAATAA+GGG - chr4_1:17282571-17282590 Msa0538140:CDS 10.0%
!!! TTTGAAAGTACTAAATTTTT+GGG + chr4_1:17280217-17280236 None:intergenic 15.0%
!!! TTTTGAAAGTACTAAATTTT+TGG + chr4_1:17280218-17280237 None:intergenic 15.0%
!! ATAATACAAAAAGGATTAAA+TGG - chr4_1:17280310-17280329 Msa0538140:three_prime_UTR 15.0%
!! TAATACAAAAAGGATTAAAT+GGG - chr4_1:17280311-17280330 Msa0538140:three_prime_UTR 15.0%
!! TATTGAAAAAGAAAAATAAG+GGG - chr4_1:17282572-17282591 Msa0538140:CDS 15.0%
!! AACATTATAATTTATGTGAA+CGG + chr4_1:17282961-17282980 None:intergenic 15.0%
!!! AGAAAATGGTTTTGAAATTT+TGG + chr4_1:17280486-17280505 None:intergenic 20.0%
!! ATTTAACGATTAAGATTGAT+TGG + chr4_1:17281565-17281584 None:intergenic 20.0%
!!! TTTAAAGTCAAACATATGAT+TGG - chr4_1:17281618-17281637 Msa0538140:CDS 20.0%
!! AACAATTAACATATGAATAC+AGG - chr4_1:17282307-17282326 Msa0538140:intron 20.0%
!! ACAATTAACATATGAATACA+GGG - chr4_1:17282308-17282327 Msa0538140:intron 20.0%
!! GTTAAAACTTATAGTAAAGA+TGG - chr4_1:17283283-17283302 Msa0538140:five_prime_UTR 20.0%
!! GTATATTATCAACTAATTCA+TGG - chr4_1:17283309-17283328 Msa0538140:five_prime_UTR 20.0%
! TATTAAATCTCAAACCTTCA+AGG - chr4_1:17280161-17280180 Msa0538140:three_prime_UTR 25.0%
! TTTCAAAACCTTAACTATAG+TGG - chr4_1:17280230-17280249 Msa0538140:three_prime_UTR 25.0%
! ATGCTACACATAATACAAAA+AGG - chr4_1:17280301-17280320 Msa0538140:three_prime_UTR 25.0%
!!! GAATTTGAGGTTTTCAAATT+TGG + chr4_1:17280431-17280450 None:intergenic 25.0%
! TTTGAAAACCTCAAATTCAA+TGG - chr4_1:17280433-17280452 Msa0538140:CDS 25.0%
! TTTGTAGTGAAATGAGAAAA+TGG + chr4_1:17280500-17280519 None:intergenic 25.0%
! TGAAGTTAACAATGAAACAT+TGG + chr4_1:17280552-17280571 None:intergenic 25.0%
! AGTTGAATAAGAATGTTAGA+TGG - chr4_1:17280972-17280991 Msa0538140:intron 25.0%
! GTTGAATAAGAATGTTAGAT+GGG - chr4_1:17280973-17280992 Msa0538140:intron 25.0%
!! TTTGTGAATGTTTGAAATCA+CGG - chr4_1:17281519-17281538 Msa0538140:intron 25.0%
!! ACGAAATTTTTCTTTAACTG+AGG - chr4_1:17281708-17281727 Msa0538140:CDS 25.0%
!!! CTTGAAAGTGATATTTTAAG+CGG + chr4_1:17281826-17281845 None:intergenic 25.0%
! ACAATGACAGAATGAATATA+AGG + chr4_1:17282258-17282277 None:intergenic 25.0%
! AATTAGATCCAAACAGAATT+CGG + chr4_1:17282767-17282786 None:intergenic 25.0%
!!! AAATTGAGCAACAGTTTTAT+GGG + chr4_1:17283030-17283049 None:intergenic 25.0%
!! TAAATTGAGCAACAGTTTTA+TGG + chr4_1:17283031-17283050 None:intergenic 25.0%
! ATCTTGTGACAAAAAAAGAA+AGG - chr4_1:17283436-17283455 Msa0538140:five_prime_UTR 25.0%
AATGACTACCACTATAGTTA+AGG + chr4_1:17280241-17280260 None:intergenic 30.0%
CTACAAAGTTAGACATGTTA+AGG + chr4_1:17280378-17280397 None:intergenic 30.0%
GTTAACAATGAAACATTGGT+TGG + chr4_1:17280548-17280567 None:intergenic 30.0%
! AATTGTAACAATGTGATGGA+TGG + chr4_1:17280580-17280599 None:intergenic 30.0%
GTTGAATTGTAACAATGTGA+TGG + chr4_1:17280584-17280603 None:intergenic 30.0%
AACGAACCATATTCGATATT+CGG + chr4_1:17280680-17280699 None:intergenic 30.0%
TCCAATGATTCAGTTGATTA+AGG - chr4_1:17280889-17280908 Msa0538140:intron 30.0%
TCCTTAATCAACTGAATCAT+TGG + chr4_1:17280893-17280912 None:intergenic 30.0%
TGATTCAGTTGATTAAGGAT+AGG - chr4_1:17280894-17280913 Msa0538140:intron 30.0%
!! GTATAATCGATTTTCAGTCT+CGG + chr4_1:17281133-17281152 None:intergenic 30.0%
!!! ATTTTTCCTGCTACTTTCTA+AGG - chr4_1:17281244-17281263 Msa0538140:intron 30.0%
TTATGTTATGCTTACAGAGT+AGG - chr4_1:17281306-17281325 Msa0538140:intron 30.0%
TCATGAATAAATATGCTGCA+TGG + chr4_1:17281373-17281392 None:intergenic 30.0%
TCTGAAAGATTTGTACTATC+AGG + chr4_1:17281479-17281498 None:intergenic 30.0%
TGATAGTACAAATCTTTCAG+AGG - chr4_1:17281478-17281497 Msa0538140:intron 30.0%
GATAGTACAAATCTTTCAGA+GGG - chr4_1:17281479-17281498 Msa0538140:intron 30.0%
CGCTTAAAATATCACTTTCA+AGG - chr4_1:17281824-17281843 Msa0538140:intron 30.0%
GAAGATATGTTGTGATTCAT+GGG - chr4_1:17281899-17281918 Msa0538140:intron 30.0%
AAGAGAGACTCTATATTAGA+GGG + chr4_1:17282033-17282052 None:intergenic 30.0%
TAAGAGAGACTCTATATTAG+AGG + chr4_1:17282034-17282053 None:intergenic 30.0%
!! GCTGTTTTCATAAGCTATTA+TGG + chr4_1:17282076-17282095 None:intergenic 30.0%
AAATAGAGCGCAAGTAAAAA+AGG - chr4_1:17282183-17282202 Msa0538140:CDS 30.0%
ATATTCATTCTGTCATTGTC+TGG - chr4_1:17282259-17282278 Msa0538140:intron 30.0%
! ATTGTCTGGTATGTATGTTT+TGG - chr4_1:17282273-17282292 Msa0538140:intron 30.0%
GAAAATGTTGAGGAAATAGT+TGG - chr4_1:17282372-17282391 Msa0538140:intron 30.0%
GTTGCATGCATAATAACTAT+GGG + chr4_1:17282450-17282469 None:intergenic 30.0%
TGTTGCATGCATAATAACTA+TGG + chr4_1:17282451-17282470 None:intergenic 30.0%
TATTATGCATGCAACAAACT+TGG - chr4_1:17282455-17282474 Msa0538140:intron 30.0%
!! GCTTAATAATGTGCTGTTTA+GGG + chr4_1:17282985-17283004 None:intergenic 30.0%
!! AGCTTAATAATGTGCTGTTT+AGG + chr4_1:17282986-17283005 None:intergenic 30.0%
!!! ACTATTTTGCTCTAAAGAGA+AGG - chr4_1:17283062-17283081 Msa0538140:CDS 30.0%
!!! CTATTTTGCTCTAAAGAGAA+GGG - chr4_1:17283063-17283082 Msa0538140:CDS 30.0%
AACTAATTCATGGTTTCCTT+CGG - chr4_1:17283319-17283338 Msa0538140:five_prime_UTR 30.0%
GGGATACTGATAAAAAAAGA+AGG - chr4_1:17283341-17283360 Msa0538140:five_prime_UTR 30.0%
AATAAAAGTCGAGAAAGCTT+TGG - chr4_1:17283398-17283417 Msa0538140:five_prime_UTR 30.0%
ATAAAAGTCGAGAAAGCTTT+GGG - chr4_1:17283399-17283418 Msa0538140:five_prime_UTR 30.0%
!!! TGTTTGTTGTTTTGCTGAAA+AGG + chr4_1:17283467-17283486 None:intergenic 30.0%
CAATGATCAATCTTCACTTG+TGG + chr4_1:17280269-17280288 None:intergenic 35.0%
TGGAAATGTGTTGGATAAGT+GGG + chr4_1:17280338-17280357 None:intergenic 35.0%
! ACATTGGTTGGATAAGTTGA+AGG + chr4_1:17280536-17280555 None:intergenic 35.0%
ATGCCAAAAAGAACAATCCA+TGG - chr4_1:17280627-17280646 Msa0538140:intron 35.0%
!! TAGCCATGGATTGTTCTTTT+TGG + chr4_1:17280633-17280652 None:intergenic 35.0%
ACGAACCATATTCGATATTC+GGG + chr4_1:17280679-17280698 None:intergenic 35.0%
!! TATGGTTCGTTGTTTTCAGA+CGG - chr4_1:17280689-17280708 Msa0538140:CDS 35.0%
!! GGATTGTTGTTTGGATTATC+CGG + chr4_1:17280740-17280759 None:intergenic 35.0%
AATCCAAACAACAATCCCTA+TGG - chr4_1:17280743-17280762 Msa0538140:intron 35.0%
! AATCCATAGGGATTGTTGTT+TGG + chr4_1:17280749-17280768 None:intergenic 35.0%
GGAAACTTCAAGAATCCATA+GGG + chr4_1:17280761-17280780 None:intergenic 35.0%
TGGAAACTTCAAGAATCCAT+AGG + chr4_1:17280762-17280781 None:intergenic 35.0%
CCTCTAACTTTCAATCCTAA+AGG + chr4_1:17280809-17280828 None:intergenic 35.0%
!! CCTTTAGGATTGAAAGTTAG+AGG - chr4_1:17280806-17280825 Msa0538140:intron 35.0%
TGAAAGTTAGAGGTGATGTT+AGG - chr4_1:17280816-17280835 Msa0538140:intron 35.0%
!! ATGGGCTAATGTTTTTGATC+CGG - chr4_1:17280991-17281010 Msa0538140:intron 35.0%
ACAAAATCAGTATACTCAGC+AGG + chr4_1:17281034-17281053 None:intergenic 35.0%
!!! GCTGAGTATACTGATTTTGT+TGG - chr4_1:17281034-17281053 Msa0538140:intron 35.0%
! TGATTTTGTTGGTCAGCTAA+AGG - chr4_1:17281045-17281064 Msa0538140:intron 35.0%
TATGTACCTTAGAAAGTAGC+AGG + chr4_1:17281253-17281272 None:intergenic 35.0%
CATGATCTTGAGCACAAAAT+TGG - chr4_1:17281337-17281356 Msa0538140:intron 35.0%
TCGAACTAGGTATCATCAAA+TGG - chr4_1:17281750-17281769 Msa0538140:CDS 35.0%
!! GAAAGTGATATTTTAAGCGG+TGG + chr4_1:17281823-17281842 None:intergenic 35.0%
ATCACTTTCAAGGAAGTTGA+AGG - chr4_1:17281834-17281853 Msa0538140:intron 35.0%
AATACACAAAAGCAGGTGTA+AGG - chr4_1:17281872-17281891 Msa0538140:intron 35.0%
GGAAGATATGTTGTGATTCA+TGG - chr4_1:17281898-17281917 Msa0538140:intron 35.0%
CTGAAATTTCTGATGCTGTA+AGG - chr4_1:17281995-17282014 Msa0538140:intron 35.0%
TTTGATGAACACAACGATGT+AGG + chr4_1:17282212-17282231 None:intergenic 35.0%
TCATTCCACATGAGAAAGAA+AGG - chr4_1:17282349-17282368 Msa0538140:intron 35.0%
CATTCCACATGAGAAAGAAA+GGG - chr4_1:17282350-17282369 Msa0538140:intron 35.0%
! TTTTCCCTTTCTTTCTCATG+TGG + chr4_1:17282357-17282376 None:intergenic 35.0%
GAAAGAAAGGGAAAATGTTG+AGG - chr4_1:17282362-17282381 Msa0538140:intron 35.0%
TAAGGGGAAAGACAACAATA+AGG - chr4_1:17282588-17282607 Msa0538140:CDS 35.0%
AAGGGGAAAGACAACAATAA+GGG - chr4_1:17282589-17282608 Msa0538140:CDS 35.0%
AAGACAACAATAAGGGACAT+AGG - chr4_1:17282596-17282615 Msa0538140:CDS 35.0%
! TGTTTCTCATTTTGCAAGCA+TGG - chr4_1:17282646-17282665 Msa0538140:CDS 35.0%
! GTTTCTCATTTTGCAAGCAT+GGG - chr4_1:17282647-17282666 Msa0538140:CDS 35.0%
TTTCTTTGATCGACCGAAAA+TGG - chr4_1:17282711-17282730 Msa0538140:CDS 35.0%
!!! CAGTTTTAATTCCCTAACTG+TGG - chr4_1:17282827-17282846 Msa0538140:CDS 35.0%
AAACCATACAACCACAGTTA+GGG + chr4_1:17282841-17282860 None:intergenic 35.0%
TAAACCATACAACCACAGTT+AGG + chr4_1:17282842-17282861 None:intergenic 35.0%
CATTGTGATATCATCCAAGA+CGG - chr4_1:17283122-17283141 Msa0538140:exon 35.0%
ATTGTGATATCATCCAAGAC+GGG - chr4_1:17283123-17283142 Msa0538140:exon 35.0%
GTTGATCGATATAGATGTTG+AGG - chr4_1:17283149-17283168 Msa0538140:five_prime_UTR 35.0%
ACTAATTCATGGTTTCCTTC+GGG - chr4_1:17283320-17283339 Msa0538140:five_prime_UTR 35.0%
!!! TTTTTTATCAGTATCCCCGA+AGG + chr4_1:17283338-17283357 None:intergenic 35.0%
GAGTCAAGAATGAACCTTGA+AGG + chr4_1:17280178-17280197 None:intergenic 40.0%
CAAGGTTCATTCTTGACTCT+TGG - chr4_1:17280179-17280198 Msa0538140:three_prime_UTR 40.0%
GTGGAAATGTGTTGGATAAG+TGG + chr4_1:17280339-17280358 None:intergenic 40.0%
GAGAATGTGTGGAAATGTGT+TGG + chr4_1:17280347-17280366 None:intergenic 40.0%
AGTTGCAGCCATTGAATTTG+AGG + chr4_1:17280444-17280463 None:intergenic 40.0%
! GGTTGGATAAGTTGAAGGAA+TGG + chr4_1:17280531-17280550 None:intergenic 40.0%
GAAGACCCGAATATCGAATA+TGG - chr4_1:17280671-17280690 Msa0538140:CDS 40.0%
!! TTGTTGTTTGGATTATCCGG+CGG + chr4_1:17280737-17280756 None:intergenic 40.0%
GAAGTTTCCAGCTGGTTATA+TGG - chr4_1:17280772-17280791 Msa0538140:intron 40.0%
ATCTCAACCATATAACCAGC+TGG + chr4_1:17280782-17280801 None:intergenic 40.0%
ATGGTTGAGATAGCTCCTTT+AGG - chr4_1:17280791-17280810 Msa0538140:intron 40.0%
AAGTTAGAGGTGATGTTAGG+AGG - chr4_1:17280819-17280838 Msa0538140:intron 40.0%
TTGATTAAGGATAGGTACCC+TGG - chr4_1:17280902-17280921 Msa0538140:intron 40.0%
CAACATCAATCTGAACACCA+GGG + chr4_1:17280922-17280941 None:intergenic 40.0%
ACAACATCAATCTGAACACC+AGG + chr4_1:17280923-17280942 None:intergenic 40.0%
TGGTGTTCAGATTGATGTTG+TGG - chr4_1:17280922-17280941 Msa0538140:intron 40.0%
GGTGTTCAGATTGATGTTGT+GGG - chr4_1:17280923-17280942 Msa0538140:intron 40.0%
TTTGTTGGTCAGCTAAAGGT+TGG - chr4_1:17281049-17281068 Msa0538140:intron 40.0%
ATCTTGAGCACAAAATTGGC+AGG - chr4_1:17281341-17281360 Msa0538140:intron 40.0%
TAAAAACAATCCTGCTCCTG+CGG + chr4_1:17281441-17281460 None:intergenic 40.0%
AGTACAAATCTTTCAGAGGG+AGG - chr4_1:17281482-17281501 Msa0538140:intron 40.0%
TTCGACAAACTCATCGGAAA+TGG + chr4_1:17281735-17281754 None:intergenic 40.0%
ACCTAGTTCGACAAACTCAT+CGG + chr4_1:17281741-17281760 None:intergenic 40.0%
GGTATCATCAAATGGAAGAC+TGG - chr4_1:17281758-17281777 Msa0538140:CDS 40.0%
AAGGAAGTTGAAGGAAGTTG+TGG - chr4_1:17281843-17281862 Msa0538140:intron 40.0%
GAGGAGAAATACACAAAAGC+AGG - chr4_1:17281865-17281884 Msa0538140:intron 40.0%
ACAAAAGCAGGTGTAAGGAA+AGG - chr4_1:17281877-17281896 Msa0538140:intron 40.0%
TGGGATACAATCAGACTCAA+AGG - chr4_1:17281918-17281937 Msa0538140:intron 40.0%
AATTTCAGCCCACACTTCAA+GGG + chr4_1:17281983-17282002 None:intergenic 40.0%
AAATTTCAGCCCACACTTCA+AGG + chr4_1:17281984-17282003 None:intergenic 40.0%
TCATGTGGAATGACGAAAAG+TGG + chr4_1:17282342-17282361 None:intergenic 40.0%
ACAATAAGGGACATAGGAGT+AGG - chr4_1:17282602-17282621 Msa0538140:CDS 40.0%
! CCACTGTGGTTTTCCATTTT+CGG + chr4_1:17282727-17282746 None:intergenic 40.0%
CATGCAATCCGAATTCTGTT+TGG - chr4_1:17282756-17282775 Msa0538140:CDS 40.0%
ATTCCCTAACTGTGGTTGTA+TGG - chr4_1:17282835-17282854 Msa0538140:CDS 40.0%
CTGTGGTTGTATGGTTTAGT+TGG - chr4_1:17282844-17282863 Msa0538140:CDS 40.0%
GGCTGCTCTTATTAATGACT+CGG - chr4_1:17282865-17282884 Msa0538140:CDS 40.0%
GAGTTGAATTGCAGCTGTAT+TGG + chr4_1:17282906-17282925 None:intergenic 40.0%
!! TGTGAACGGTAAAAGTACCT+AGG + chr4_1:17282947-17282966 None:intergenic 40.0%
TTGTGATATCATCCAAGACG+GGG - chr4_1:17283124-17283143 Msa0538140:exon 40.0%
! CTTTTGCATAGCCTAAGAGA+GGG - chr4_1:17283211-17283230 Msa0538140:five_prime_UTR 40.0%
TTAAGTCGTTGTGCTAACTG+TGG - chr4_1:17283261-17283280 Msa0538140:five_prime_UTR 40.0%
CTAATTCATGGTTTCCTTCG+GGG - chr4_1:17283321-17283340 Msa0538140:five_prime_UTR 40.0%
AGGACTAGAACGAGAATGTG+TGG + chr4_1:17280358-17280377 None:intergenic 45.0%
GGTCTTCTCCATCGTCAAAA+GGG + chr4_1:17280658-17280677 None:intergenic 45.0%
TTCAGACGGTAAACAAGACG+AGG - chr4_1:17280703-17280722 Msa0538140:CDS 45.0%
GTAAACAAGACGAGGATCCA+AGG - chr4_1:17280711-17280730 Msa0538140:intron 45.0%
GGATTCTTGAAGTTTCCAGC+TGG - chr4_1:17280764-17280783 Msa0538140:intron 45.0%
!! TGTTAGGAGGTGTTGTTGTG+TGG - chr4_1:17280832-17280851 Msa0538140:intron 45.0%
!! AGGTGTTGTTGTGTGGTATC+AGG - chr4_1:17280839-17280858 Msa0538140:intron 45.0%
TGTTGTTGTGTGGTATCAGG+TGG - chr4_1:17280842-17280861 Msa0538140:intron 45.0%
!! ATGTTGTGGGTTCTGAGAGA+GGG - chr4_1:17280936-17280955 Msa0538140:intron 45.0%
! TTGGTCAGCTAAAGGTTGGT+TGG - chr4_1:17281053-17281072 Msa0538140:intron 45.0%
GTCGGTATCAGTGCATTACA+AGG + chr4_1:17281155-17281174 None:intergenic 45.0%
AGCACAAAATTGGCAGGAGT+TGG - chr4_1:17281347-17281366 Msa0538140:intron 45.0%
ATAGCTAACTCTATCTCGCG+CGG + chr4_1:17281399-17281418 None:intergenic 45.0%
TCCGATGAGTTTGTCGAACT+AGG - chr4_1:17281737-17281756 Msa0538140:CDS 45.0%
! CATCAAATGGAAGACTGGCT+AGG - chr4_1:17281763-17281782 Msa0538140:CDS 45.0%
! AAATGGAAGACTGGCTAGGA+AGG - chr4_1:17281767-17281786 Msa0538140:CDS 45.0%
GAAGTTGAAGGAAGTTGTGG+AGG - chr4_1:17281846-17281865 Msa0538140:intron 45.0%
AAAGGCCACAATGCAGTCTA+GGG - chr4_1:17281936-17281955 Msa0538140:intron 45.0%
ATTTCAGCCCACACTTCAAG+GGG + chr4_1:17281982-17282001 None:intergenic 45.0%
! GGTGGTGATGAAGATTATGG+AGG + chr4_1:17282406-17282425 None:intergenic 45.0%
! AGGGGTGGTGATGAAGATTA+TGG + chr4_1:17282409-17282428 None:intergenic 45.0%
ATAATCTTCATCACCACCCC+TGG - chr4_1:17282408-17282427 Msa0538140:intron 45.0%
ATACTTGAGTACCTGTCCAG+GGG + chr4_1:17282427-17282446 None:intergenic 45.0%
GATACTTGAGTACCTGTCCA+GGG + chr4_1:17282428-17282447 None:intergenic 45.0%
CCGAAAATGGAAAACCACAG+TGG - chr4_1:17282724-17282743 Msa0538140:CDS 45.0%
! GCTCTTATTAATGACTCGGC+TGG - chr4_1:17282869-17282888 Msa0538140:CDS 45.0%
! AGGGAAACAAGTTTGTTCCG+CGG - chr4_1:17283082-17283101 Msa0538140:CDS 45.0%
! GCTTTTGCATAGCCTAAGAG+AGG - chr4_1:17283210-17283229 Msa0538140:five_prime_UTR 45.0%
TCGTCAAAAGGGTCTAGCCA+TGG + chr4_1:17280647-17280666 None:intergenic 50.0%
! TGGCTAGACCCTTTTGACGA+TGG - chr4_1:17280647-17280666 Msa0538140:CDS 50.0%
GGGTCTTCTCCATCGTCAAA+AGG + chr4_1:17280659-17280678 None:intergenic 50.0%
!! GATGTTGTGGGTTCTGAGAG+AGG - chr4_1:17280935-17280954 Msa0538140:intron 50.0%
TCAGTATACTCAGCAGGCTC+AGG + chr4_1:17281028-17281047 None:intergenic 50.0%
GATTAGGCGTGTCCTGAAGT+CGG + chr4_1:17281184-17281203 None:intergenic 50.0%
TTCAGGACACGCCTAATCTG+AGG - chr4_1:17281186-17281205 Msa0538140:CDS 50.0%
GCACAGACACTCCTCAGATT+AGG + chr4_1:17281200-17281219 None:intergenic 50.0%
TACCCAAATGTGAATGCCGC+AGG - chr4_1:17281422-17281441 Msa0538140:intron 50.0%
CTCCTGCGGCATTCACATTT+GGG + chr4_1:17281427-17281446 None:intergenic 50.0%
CAAAGGCCACAATGCAGTCT+AGG - chr4_1:17281935-17281954 Msa0538140:intron 50.0%
AAGGCCACAATGCAGTCTAG+GGG - chr4_1:17281937-17281956 Msa0538140:intron 50.0%
CAAGGGGTAGCAAGCTATCA+GGG + chr4_1:17281966-17281985 None:intergenic 50.0%
TCAAGGGGTAGCAAGCTATC+AGG + chr4_1:17281967-17281986 None:intergenic 50.0%
CTTGCTACCCCTTGAAGTGT+GGG - chr4_1:17281972-17281991 Msa0538140:intron 50.0%
GGATACTTGAGTACCTGTCC+AGG + chr4_1:17282429-17282448 None:intergenic 50.0%
GCATGAAGACTATGCCACTG+TGG + chr4_1:17282741-17282760 None:intergenic 50.0%
! GGGAAACAAGTTTGTTCCGC+GGG - chr4_1:17283083-17283102 Msa0538140:CDS 50.0%
CATTTCTTCTCTTCTGCCCG+CGG + chr4_1:17283102-17283121 None:intergenic 50.0%
ATCGATCAACTTCCCCGTCT+TGG + chr4_1:17283139-17283158 None:intergenic 50.0%
TAAGAGAGGGAAGAGAGCGA+GGG - chr4_1:17283224-17283243 Msa0538140:five_prime_UTR 50.0%
TTTGGATTATCCGGCGGCCT+TGG + chr4_1:17280731-17280750 None:intergenic 55.0%
GGCTCAGGAAACTCATCGTC+CGG + chr4_1:17281013-17281032 None:intergenic 55.0%
TCCTGAAGTCGGACACACGT+CGG + chr4_1:17281173-17281192 None:intergenic 55.0%
GCTCCTGCGGCATTCACATT+TGG + chr4_1:17281428-17281447 None:intergenic 55.0%
AATGTGAATGCCGCAGGAGC+AGG - chr4_1:17281428-17281447 Msa0538140:intron 55.0%
TGCCGTGGAACGCTTCGAAA+CGG + chr4_1:17281793-17281812 None:intergenic 55.0%
GTCACCCCTAGACTGCATTG+TGG + chr4_1:17281944-17281963 None:intergenic 55.0%
! GCTTGCTACCCCTTGAAGTG+TGG - chr4_1:17281971-17281990 Msa0538140:intron 55.0%
CAAATGCGCGCGAGAAACCT+AGG - chr4_1:17282927-17282946 Msa0538140:CDS 55.0%
CTCGCTCTCTTCCCTCTCTT+AGG + chr4_1:17283225-17283244 None:intergenic 55.0%
CTAAGAGAGGGAAGAGAGCG+AGG - chr4_1:17283223-17283242 Msa0538140:five_prime_UTR 55.0%
ACCGACGTGTGTCCGACTTC+AGG - chr4_1:17281169-17281188 Msa0538140:CDS 60.0%
! GGCCGTTTCGAAGCGTTCCA+CGG - chr4_1:17281788-17281807 Msa0538140:CDS 60.0%
! GTTTCGAAGCGTTCCACGGC+AGG - chr4_1:17281792-17281811 Msa0538140:CDS 60.0%
CTTCATCACCACCCCTGGAC+AGG - chr4_1:17282413-17282432 Msa0538140:intron 60.0%
CTTGAGTACCTGTCCAGGGG+TGG + chr4_1:17282424-17282443 None:intergenic 60.0%
AGGGAAGAGAGCGAGGGTTC+TGG - chr4_1:17283230-17283249 Msa0538140:five_prime_UTR 60.0%
AGACGAGGATCCAAGGCCGC+CGG - chr4_1:17280718-17280737 Msa0538140:intron 65.0%
AGCGGTGGCACAACCTGCCG+TGG + chr4_1:17281808-17281827 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 17280080 17283507 17280080 ID=Msa0538140;Name=Msa0538140
chr4_1 mRNA 17280080 17283507 17280080 ID=Msa0538140-mRNA-1;Parent=Msa0538140;Name=Msa0538140-mRNA-1;_AED=0.01;_eAED=0.01;_QI=372|1|1|1|0.8|0.66|6|286|473
chr4_1 exon 17280080 17280531 17280080 ID=Msa0538140-mRNA-1:exon:5149;Parent=Msa0538140-mRNA-1
chr4_1 exon 17280639 17280724 17280639 ID=Msa0538140-mRNA-1:exon:5148;Parent=Msa0538140-mRNA-1
chr4_1 exon 17281153 17281258 17281153 ID=Msa0538140-mRNA-1:exon:5147;Parent=Msa0538140-mRNA-1
chr4_1 exon 17281571 17281828 17281571 ID=Msa0538140-mRNA-1:exon:5146;Parent=Msa0538140-mRNA-1
chr4_1 exon 17282074 17282264 17282074 ID=Msa0538140-mRNA-1:exon:5145;Parent=Msa0538140-mRNA-1
chr4_1 exon 17282521 17283507 17282521 ID=Msa0538140-mRNA-1:exon:5144;Parent=Msa0538140-mRNA-1
chr4_1 five_prime_UTR 17283136 17283507 17283136 ID=Msa0538140-mRNA-1:five_prime_utr;Parent=Msa0538140-mRNA-1
chr4_1 CDS 17282521 17283135 17282521 ID=Msa0538140-mRNA-1:cds;Parent=Msa0538140-mRNA-1
chr4_1 CDS 17282074 17282264 17282074 ID=Msa0538140-mRNA-1:cds;Parent=Msa0538140-mRNA-1
chr4_1 CDS 17281571 17281828 17281571 ID=Msa0538140-mRNA-1:cds;Parent=Msa0538140-mRNA-1
chr4_1 CDS 17281153 17281258 17281153 ID=Msa0538140-mRNA-1:cds;Parent=Msa0538140-mRNA-1
chr4_1 CDS 17280639 17280724 17280639 ID=Msa0538140-mRNA-1:cds;Parent=Msa0538140-mRNA-1
chr4_1 CDS 17280366 17280531 17280366 ID=Msa0538140-mRNA-1:cds;Parent=Msa0538140-mRNA-1
chr4_1 three_prime_UTR 17280080 17280365 17280080 ID=Msa0538140-mRNA-1:three_prime_utr;Parent=Msa0538140-mRNA-1
Gene Sequence

>Msa0538140

ATGGCTGCAACTGCAACATATTATTTGCATACCAAAATTTCAAAACCATTTTCTCATTTCACTACAAACACATTTTCCATTCCTTCAACTTATCCAACCAATGTTTCATTGTTAACTTCATTAGACCATCCATCACATTGTTACAATTCAACTCGAAGACTAAATCTTCGCGTAAATGCCAAAAAGAACAATCCATGGCTAGACCCTTTTGACGATGGAGAAGACCCGAATATCGAATATGGTTCGTTGTTTTCAGACGGTAAACAAGACGAGGATCCAAGGCCGCCGGATAATCCAAACAACAATCCCTATGGATTCTTGAAGTTTCCAGCTGGTTATATGGTTGAGATAGCTCCTTTAGGATTGAAAGTTAGAGGTGATGTTAGGAGGTGTTGTTGTGTGGTATCAGGTGGTGTTTATGAGAATCTGCTGTTTTTTCCAATGATTCAGTTGATTAAGGATAGGTACCCTGGTGTTCAGATTGATGTTGTGGGTTCTGAGAGAGGGAAACAATGTTATGAGTTGAATAAGAATGTTAGATGGGCTAATGTTTTTGATCCGGACGATGAGTTTCCTGAGCCTGCTGAGTATACTGATTTTGTTGGTCAGCTAAAGAGTAGGTACTATGACATGATCTTGAGCACAAAATTGGCAGGAGTTGGCCATGCAGCATATTTATTCATGACAACCGCGCGAGATAGAGTTAGCTATGTCTACCCAAATGTGAATGCCGCAGGAGCAGGATTGTTTTTATCTGAAACATTCACACCTGATAGTACAAATCTTTCAGAGGGAGGATATCATATGTATCATCAAATGGAAGACTGGCTAGGAAGGCCGTTTCGAAGCGTTCCACGGCAGGTTGTGCCACCGCTTAAAATATCACTTTCAAGGAAGTTGAAGGAAGTTGTGGAGGAGAAATACACAAAAGCAGGTGTAAGGAAAGGAAGATATGTTGTGATTCATGGGATACAATCAGACTCAAAGGCCACAATGCAGTCTAGGGGTGACCCTGATAGCTTGCTACCCCTTGAAGTGTGGGCTGAAATTTCTGATGCTGTAAGGGAATTTACACCACTTTTCGTCATTCCACATGAGAAAGAAAGGGAAAATGTTGAGGAAATAGTTGGAGAAGATTCCTCCATAATCTTCATCACCACCCCTGGACAGTTGGCTGCTCTTATTAATGACTCGGCTGGAGTTATAGCTACCAATACAGCTGCAATTCAACTCGCAAATGCGCGCGAGAAACCTAGTGTTGCACTATTTTGCTCTAAAGAGAAGGGAAACAAGTTTGTTCCGCGGGCAGAAGAGAAGAAATGCATTGTGATATCATCCAAGACGGGGAAGTTGATCGATATAGATGTTGAGGCTGTAAAAAATGCAATTCAAACTTTCAATGTTTCTCTAGCTTTTGCATAG

Protein sequence

>Msa0538140

MAATATYYLHTKISKPFSHFTTNTFSIPSTYPTNVSLLTSLDHPSHCYNSTRRLNLRVNAKKNNPWLDPFDDGEDPNIEYGSLFSDGKQDEDPRPPDNPNNNPYGFLKFPAGYMVEIAPLGLKVRGDVRRCCCVVSGGVYENLLFFPMIQLIKDRYPGVQIDVVGSERGKQCYELNKNVRWANVFDPDDEFPEPAEYTDFVGQLKSRYYDMILSTKLAGVGHAAYLFMTTARDRVSYVYPNVNAAGAGLFLSETFTPDSTNLSEGGYHMYHQMEDWLGRPFRSVPRQVVPPLKISLSRKLKEVVEEKYTKAGVRKGRYVVIHGIQSDSKATMQSRGDPDSLLPLEVWAEISDAVREFTPLFVIPHEKERENVEEIVGEDSSIIFITTPGQLAALINDSAGVIATNTAAIQLANAREKPSVALFCSKEKGNKFVPRAEEKKCIVISSKTGKLIDIDVEAVKNAIQTFNVSLAFA*