Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1262960 | XP_013458171.2 | 95.578 | 588 | 25 | 1 | 1 | 587 | 8 | 595 | 0.0 | 1162 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1262960 | A0A396IHI8 | 95.578 | 588 | 25 | 1 | 1 | 587 | 8 | 595 | 0.0 | 1162 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004540 | Msa1262960 | 0.816383 | 5.689894e-52 | -8.615850e-47 |
| Msa0005000 | Msa1262960 | -0.851027 | 1.159597e-60 | -8.615850e-47 |
| Msa0030280 | Msa1262960 | 0.806251 | 9.005149e-50 | -8.615850e-47 |
| Msa0032320 | Msa1262960 | 0.810903 | 9.146067e-51 | -8.615850e-47 |
| Msa0039250 | Msa1262960 | 0.818390 | 2.009509e-52 | -8.615850e-47 |
| Msa0052870 | Msa1262960 | 0.800937 | 1.139839e-48 | -8.615850e-47 |
| Msa0053050 | Msa1262960 | -0.819019 | 1.446993e-52 | -8.615850e-47 |
| Msa0077880 | Msa1262960 | 0.813016 | 3.168066e-51 | -8.615850e-47 |
| Msa0094010 | Msa1262960 | 0.824410 | 8.192919e-54 | -8.615850e-47 |
| Msa0097950 | Msa1262960 | 0.804837 | 1.783207e-49 | -8.615850e-47 |
| Msa0098390 | Msa1262960 | -0.853426 | 2.408617e-61 | -8.615850e-47 |
| Msa0116790 | Msa1262960 | 0.816332 | 5.839703e-52 | -8.615850e-47 |
| Msa0118000 | Msa1262960 | 0.801528 | 8.629133e-49 | -8.615850e-47 |
| Msa0119320 | Msa1262960 | 0.854800 | 9.668629e-62 | -8.615850e-47 |
| Msa0606810 | Msa1262960 | 0.816366 | 5.739399e-52 | -8.615850e-47 |
| Msa0619180 | Msa1262960 | 0.809030 | 2.314464e-50 | -8.615850e-47 |
| Msa0626680 | Msa1262960 | 0.809754 | 1.618184e-50 | -8.615850e-47 |
| Msa0640500 | Msa1262960 | 0.809477 | 1.855741e-50 | -8.615850e-47 |
| Msa0648240 | Msa1262960 | -0.803652 | 3.147457e-49 | -8.615850e-47 |
| Msa0648520 | Msa1262960 | 0.803267 | 3.783024e-49 | -8.615850e-47 |
| Msa0663120 | Msa1262960 | 0.805297 | 1.428998e-49 | -8.615850e-47 |
| Msa0664760 | Msa1262960 | 0.831995 | 1.216411e-55 | -8.615850e-47 |
| Msa0679100 | Msa1262960 | 0.804171 | 2.455184e-49 | -8.615850e-47 |
| Msa0687230 | Msa1262960 | 0.814619 | 1.404645e-51 | -8.615850e-47 |
| Msa0691050 | Msa1262960 | 0.812430 | 4.255721e-51 | -8.615850e-47 |
| Msa0692880 | Msa1262960 | 0.800221 | 1.595407e-48 | -8.615850e-47 |
| Msa0716410 | Msa1262960 | 0.809369 | 1.958119e-50 | -8.615850e-47 |
| Msa0716860 | Msa1262960 | 0.806250 | 9.010651e-50 | -8.615850e-47 |
| Msa0730640 | Msa1262960 | 0.805100 | 1.570963e-49 | -8.615850e-47 |
| Msa0744090 | Msa1262960 | 0.810121 | 1.349490e-50 | -8.615850e-47 |
| Msa0747720 | Msa1262960 | -0.846649 | 1.902419e-59 | -8.615850e-47 |
| Msa0753770 | Msa1262960 | 0.803609 | 3.213010e-49 | -8.615850e-47 |
| Msa0756930 | Msa1262960 | 0.809429 | 1.900497e-50 | -8.615850e-47 |
| Msa0757800 | Msa1262960 | 0.804576 | 2.021290e-49 | -8.615850e-47 |
| Msa0784620 | Msa1262960 | 0.803046 | 4.201358e-49 | -8.615850e-47 |
| Msa0799000 | Msa1262960 | 0.855044 | 8.212004e-62 | -8.615850e-47 |
| Msa0814630 | Msa1262960 | -0.809711 | 1.652989e-50 | -8.615850e-47 |
| Msa0825280 | Msa1262960 | 0.812639 | 3.830596e-51 | -8.615850e-47 |
| Msa0837410 | Msa1262960 | 0.828078 | 1.097881e-54 | -8.615850e-47 |
| Msa0125770 | Msa1262960 | 0.809505 | 1.830955e-50 | -8.615850e-47 |
| Msa0130240 | Msa1262960 | 0.807374 | 5.214752e-50 | -8.615850e-47 |
| Msa0133720 | Msa1262960 | 0.820081 | 8.282957e-53 | -8.615850e-47 |
| Msa0133820 | Msa1262960 | 0.823511 | 1.331844e-53 | -8.615850e-47 |
| Msa0134000 | Msa1262960 | 0.836285 | 1.023677e-56 | -8.615850e-47 |
| Msa0138970 | Msa1262960 | -0.819667 | 1.029582e-52 | -8.615850e-47 |
| Msa0145070 | Msa1262960 | 0.807721 | 4.400995e-50 | -8.615850e-47 |
| Msa0165300 | Msa1262960 | 0.808078 | 3.696094e-50 | -8.615850e-47 |
| Msa0181000 | Msa1262960 | 0.833782 | 4.375636e-56 | -8.615850e-47 |
| Msa0181230 | Msa1262960 | 0.820784 | 5.711280e-53 | -8.615850e-47 |
| Msa0193540 | Msa1262960 | 0.812812 | 3.511569e-51 | -8.615850e-47 |
| Msa0208810 | Msa1262960 | 0.808739 | 2.671091e-50 | -8.615850e-47 |
| Msa0212750 | Msa1262960 | -0.807447 | 5.033140e-50 | -8.615850e-47 |
| Msa0229940 | Msa1262960 | 0.852920 | 3.363641e-61 | -8.615850e-47 |
| Msa1261070 | Msa1262960 | 0.817777 | 2.765691e-52 | -8.615850e-47 |
| Msa1262960 | Msa1277490 | 0.807221 | 5.619645e-50 | -8.615850e-47 |
| Msa1262960 | Msa1294960 | 0.815659 | 8.253058e-52 | -8.615850e-47 |
| Msa1262960 | Msa1302060 | 0.943258 | 1.662630e-102 | -8.615850e-47 |
| Msa1262960 | Msa1318620 | 0.819477 | 1.137783e-52 | -8.615850e-47 |
| Msa1262960 | Msa1333970 | 0.812236 | 4.691641e-51 | -8.615850e-47 |
| Msa1262960 | Msa1340040 | -0.809502 | 1.833102e-50 | -8.615850e-47 |
| Msa1262960 | Msa1396780 | 0.808024 | 3.795524e-50 | -8.615850e-47 |
| Msa1262960 | Msa1398860 | 0.834069 | 3.708391e-56 | -8.615850e-47 |
| Msa1262960 | Msa1422840 | 0.806542 | 7.819980e-50 | -8.615850e-47 |
| Msa1262960 | Msa1422910 | 0.809497 | 1.837673e-50 | -8.615850e-47 |
| Msa1262960 | Msa1438450 | 0.806539 | 7.830946e-50 | -8.615850e-47 |
| Msa1262960 | Msa1449910 | 0.823269 | 1.517077e-53 | -8.615850e-47 |
| Msa0384670 | Msa1262960 | 0.808880 | 2.491873e-50 | -8.615850e-47 |
| Msa0392200 | Msa1262960 | 0.813406 | 2.600702e-51 | -8.615850e-47 |
| Msa0431770 | Msa1262960 | 0.820272 | 7.487610e-53 | -8.615850e-47 |
| Msa0434570 | Msa1262960 | 0.804865 | 1.759594e-49 | -8.615850e-47 |
| Msa0434770 | Msa1262960 | 0.802255 | 6.118105e-49 | -8.615850e-47 |
| Msa0436200 | Msa1262960 | 0.814208 | 1.732319e-51 | -8.615850e-47 |
| Msa0437510 | Msa1262960 | 0.828611 | 8.165083e-55 | -8.615850e-47 |
| Msa0478580 | Msa1262960 | 0.824457 | 7.987564e-54 | -8.615850e-47 |
| Msa0985550 | Msa1262960 | 0.813006 | 3.184221e-51 | -8.615850e-47 |
| Msa1004420 | Msa1262960 | 0.811584 | 6.506644e-51 | -8.615850e-47 |
| Msa1028350 | Msa1262960 | 0.808541 | 2.943935e-50 | -8.615850e-47 |
| Msa1071660 | Msa1262960 | 0.800692 | 1.279252e-48 | -8.615850e-47 |
| Msa0261160 | Msa1262960 | 0.802962 | 4.373548e-49 | -8.615850e-47 |
| Msa0274630 | Msa1262960 | 0.803602 | 3.224123e-49 | -8.615850e-47 |
| Msa0277420 | Msa1262960 | 0.830772 | 2.432748e-55 | -8.615850e-47 |
| Msa0295000 | Msa1262960 | -0.813012 | 3.174114e-51 | -8.615850e-47 |
| Msa0317270 | Msa1262960 | 0.812540 | 4.027407e-51 | -8.615850e-47 |
| Msa0346990 | Msa1262960 | 0.825001 | 5.945259e-54 | -8.615850e-47 |
| Msa1113590 | Msa1262960 | 0.806411 | 8.335693e-50 | -8.615850e-47 |
| Msa1158770 | Msa1262960 | 0.804065 | 2.583063e-49 | -8.615850e-47 |
| Msa1169720 | Msa1262960 | 0.829806 | 4.188831e-55 | -8.615850e-47 |
| Msa1173900 | Msa1262960 | 0.804548 | 2.049192e-49 | -8.615850e-47 |
| Msa1198880 | Msa1262960 | 0.819217 | 1.303971e-52 | -8.615850e-47 |
| Msa1213810 | Msa1262960 | 0.806158 | 9.421452e-50 | -8.615850e-47 |
| Msa1214320 | Msa1262960 | 0.830320 | 3.138644e-55 | -8.615850e-47 |
| Msa1223330 | Msa1262960 | 0.824457 | 7.988688e-54 | -8.615850e-47 |
| Msa0524590 | Msa1262960 | 0.805617 | 1.224492e-49 | -8.615850e-47 |
| Msa0529320 | Msa1262960 | 0.803152 | 3.995632e-49 | -8.615850e-47 |
| Msa0556010 | Msa1262960 | 0.811830 | 5.754312e-51 | -8.615850e-47 |
| Msa0576890 | Msa1262960 | 0.804606 | 1.992706e-49 | -8.615850e-47 |
| Msa0578090 | Msa1262960 | 0.853782 | 1.903663e-61 | -8.615850e-47 |
| Msa0581690 | Msa1262960 | 0.817730 | 2.833474e-52 | -8.615850e-47 |
| Msa0584550 | Msa1262960 | 0.812405 | 4.311111e-51 | -8.615850e-47 |
| Msa0586850 | Msa1262960 | 0.824315 | 8.628530e-54 | -8.615850e-47 |
| Msa0851470 | Msa1262960 | 0.811088 | 8.339302e-51 | -8.615850e-47 |
| Msa0855160 | Msa1262960 | -0.802103 | 6.576150e-49 | -8.615850e-47 |
| Msa0858820 | Msa1262960 | 0.809922 | 1.489407e-50 | -8.615850e-47 |
| Msa0947530 | Msa1262960 | -0.825148 | 5.488114e-54 | -8.615850e-47 |
| Msa0976980 | Msa1262960 | 0.817948 | 2.530034e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1262960 | MtrunA17_Chr4g0065711 | 95.578 | 588 | 25 | 1 | 1 | 587 | 8 | 595 | 0.0 | 1162 |
| Msa1262960 | MtrunA17_Chr4g0065701 | 83.849 | 582 | 86 | 5 | 10 | 587 | 5 | 582 | 0.0 | 1009 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1262960 | AT3G06150.1 | 59.228 | 596 | 212 | 5 | 5 | 587 | 17 | 594 | 0.0 | 760 |
| Msa1262960 | AT5G19060.1 | 58.179 | 593 | 200 | 7 | 1 | 587 | 1 | 551 | 0.0 | 735 |
Find 120 sgRNAs with CRISPR-Local
Find 300 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATGAAACACAAAACTATTT+AGG | 0.122544 | 8_2:+65984224 | Msa1262960:CDS |
| GCTGGAGATATACATGAATT+TGG | 0.203974 | 8_2:+65983480 | Msa1262960:CDS |
| TAACAAGATCAATACTTTCT+AGG | 0.204121 | 8_2:-65983290 | None:intergenic |
| TATTTGGAATGTTCATTGTT+TGG | 0.286515 | 8_2:+65983070 | Msa1262960:CDS |
| ATGAAACACAAAACTATTTA+GGG | 0.311969 | 8_2:+65984225 | Msa1262960:CDS |
| AAATTCATGTCAAATCTTCT+TGG | 0.314866 | 8_2:-65984140 | None:intergenic |
| AATTGGGTTACTCACTGTTT+TGG | 0.328249 | 8_2:+65983044 | Msa1262960:CDS |
| TTGAACACCTCCATCTTGTT+AGG | 0.328849 | 8_2:-65984518 | None:intergenic |
| CACCGGTTGCGACTGTATTC+CGG | 0.328927 | 8_2:-65984469 | None:intergenic |
| TCGGGGAAGGCTCGATGTTT+AGG | 0.329214 | 8_2:+65983522 | Msa1262960:CDS |
| TTTCAAGCATTGGATGATTC+GGG | 0.335938 | 8_2:+65983504 | Msa1262960:CDS |
| TCTTTCCACTTCATCTTTGC+CGG | 0.336387 | 8_2:-65984665 | None:intergenic |
| CCTATGCATCAATGGCGAAT+TGG | 0.341195 | 8_2:+65983027 | Msa1262960:CDS |
| CCACGATTCCCCTGAAAGAT+TGG | 0.345913 | 8_2:-65983562 | None:intergenic |
| TGATGGTTCGTTAGGAGCTT+TGG | 0.358146 | 8_2:+65983944 | Msa1262960:CDS |
| ACTGTTGAGATTTCAATTCC+TGG | 0.364252 | 8_2:+65983420 | Msa1262960:CDS |
| TTCATTGTTTGGAGCATTGA+TGG | 0.369520 | 8_2:+65983081 | Msa1262960:CDS |
| CTATGCATCAATGGCGAATT+GGG | 0.376005 | 8_2:+65983028 | Msa1262960:CDS |
| TGTAACGATGGAGTTCATTA+TGG | 0.380953 | 8_2:+65984635 | Msa1262960:CDS |
| AATTCATGTCAAATCTTCTT+GGG | 0.385928 | 8_2:-65984139 | None:intergenic |
| TTATAAACCCCAACAAAATC+AGG | 0.387815 | 8_2:-65983648 | None:intergenic |
| CAAGCATCTTCAATGGTCAT+TGG | 0.387850 | 8_2:+65984201 | Msa1262960:CDS |
| TTGCTTTATAGACACTTTGA+AGG | 0.399974 | 8_2:+65983684 | Msa1262960:CDS |
| AACAGAAACATGGGTATTGT+TGG | 0.411803 | 8_2:-65983235 | None:intergenic |
| CTCGTTCTTGTAGAATCTAA+TGG | 0.420518 | 8_2:-65983760 | None:intergenic |
| TGAGATTTCAATTCCTGGAT+TGG | 0.421189 | 8_2:+65983425 | Msa1262960:CDS |
| CTTCGATTCCTATGCATCAA+TGG | 0.426681 | 8_2:+65983019 | Msa1262960:CDS |
| ACAGTTTGAGACGGATCGGC+TGG | 0.435016 | 8_2:-65984170 | None:intergenic |
| ACAGAAACATGGGTATTGTT+GGG | 0.439503 | 8_2:-65983234 | None:intergenic |
| GACAGTGAAGCAAAGGGGAT+TGG | 0.439789 | 8_2:+65984427 | Msa1262960:CDS |
| AGGAATGACGACTGCATCAT+TGG | 0.441326 | 8_2:+65983864 | Msa1262960:CDS |
| AGCTTTGGAGAGTAATGGTT+GGG | 0.451236 | 8_2:+65983959 | Msa1262960:CDS |
| GAAGTTTATGATGCCAGAAA+AGG | 0.452747 | 8_2:+65982990 | None:intergenic |
| AAGTGGAAAGATGGTCAAAT+TGG | 0.455742 | 8_2:+65984677 | Msa1262960:CDS |
| GCCTTGCAAGTTTGCAACTC+CGG | 0.458232 | 8_2:-65983792 | None:intergenic |
| AAGCAAACGGGCATTGTCTC+CGG | 0.459404 | 8_2:+65984563 | Msa1262960:CDS |
| TGTATTCAGCTGAGCCTGCT+TGG | 0.460294 | 8_2:+65984009 | Msa1262960:CDS |
| TAAGAATAATGTTGCAACTT+GGG | 0.464767 | 8_2:+65983311 | Msa1262960:CDS |
| TACCGGAATACAGTCGCAAC+CGG | 0.466928 | 8_2:+65984467 | Msa1262960:CDS |
| AAAGGGATGTTTGGTGTGGA+AGG | 0.470735 | 8_2:+65983826 | Msa1262960:CDS |
| TGCAAATCTCCCTGGTGTGA+TGG | 0.472089 | 8_2:+65983927 | Msa1262960:CDS |
| CCCTGGTGTGATGGTTCGTT+AGG | 0.482336 | 8_2:+65983936 | Msa1262960:CDS |
| GAAGGTGGACAAGGCATGGC+AGG | 0.484946 | 8_2:+65983844 | Msa1262960:CDS |
| TTAAGAATAATGTTGCAACT+TGG | 0.489256 | 8_2:+65983310 | Msa1262960:CDS |
| AACACAAAACTATTTAGGGT+TGG | 0.492713 | 8_2:+65984229 | Msa1262960:CDS |
| AAACATGGGTATTGTTGGGT+TGG | 0.502515 | 8_2:-65983230 | None:intergenic |
| CGGATTACAAGCATCTTCAA+TGG | 0.504600 | 8_2:+65984194 | Msa1262960:CDS |
| GAGTTCATGATCACAGTGTC+TGG | 0.509501 | 8_2:-65984314 | None:intergenic |
| GGGATGTTTGGTGTGGAAGG+TGG | 0.512214 | 8_2:+65983829 | Msa1262960:CDS |
| TTCTTCAAGCAATTCCAAGC+AGG | 0.512350 | 8_2:-65984023 | None:intergenic |
| ATTCCTGGATTGGATTTGAA+TGG | 0.513325 | 8_2:+65983435 | Msa1262960:CDS |
| AGTTTGATAGAGTTATCAGC+TGG | 0.516814 | 8_2:+65983462 | Msa1262960:CDS |
| CCGATCCGTCTCAAACTGTT+CGG | 0.518681 | 8_2:+65984174 | Msa1262960:CDS |
| GGCATTTAATCCTAACAAGA+TGG | 0.519571 | 8_2:+65984508 | Msa1262960:CDS |
| CGATCATAAACAAATCTCCA+TGG | 0.520523 | 8_2:-65983720 | None:intergenic |
| CCAATTCGCCATTGATGCAT+AGG | 0.528740 | 8_2:-65983027 | None:intergenic |
| TATGAAGACAGTGAAGCAAA+GGG | 0.529660 | 8_2:+65984421 | Msa1262960:CDS |
| TTTAGCTAGATGGTTAGCTA+AGG | 0.529987 | 8_2:+65983371 | Msa1262960:CDS |
| CTTGGGACAGAATGTACCTC+AGG | 0.530333 | 8_2:-65984122 | None:intergenic |
| GAGATTTGTTTATGATCGAA+TGG | 0.531989 | 8_2:+65983725 | Msa1262960:CDS |
| TTAGGAGCTTTGGAGAGTAA+TGG | 0.533923 | 8_2:+65983954 | Msa1262960:CDS |
| GTATTCCGGTAAAACACTCT+TGG | 0.534539 | 8_2:-65984455 | None:intergenic |
| TTAGCTAGATGGTTAGCTAA+GGG | 0.535190 | 8_2:+65983372 | Msa1262960:CDS |
| TGTGAAAGATTAAAAGTAGG+AGG | 0.536517 | 8_2:-65983171 | None:intergenic |
| GATCATAAACAAATCTCCAT+GGG | 0.537397 | 8_2:-65983719 | None:intergenic |
| AACAAGATGGAGGTGTTCAA+TGG | 0.543709 | 8_2:+65984521 | Msa1262960:CDS |
| TCCTAACGAACCATCACACC+AGG | 0.544571 | 8_2:-65983937 | None:intergenic |
| CAGTTTGAGACGGATCGGCT+GGG | 0.544793 | 8_2:-65984169 | None:intergenic |
| TCACCATTCAAATCCAATCC+AGG | 0.546978 | 8_2:-65983438 | None:intergenic |
| ATGCTCGTACACTACGAAAG+TGG | 0.550418 | 8_2:-65984355 | None:intergenic |
| GGAATTGCTTGAAGAATCGA+TGG | 0.552764 | 8_2:+65984030 | Msa1262960:CDS |
| GCAAAGATGAAGTGGAAAGA+TGG | 0.553104 | 8_2:+65984668 | Msa1262960:CDS |
| AAGGTTTGAAGTTTACCCCA+TGG | 0.558490 | 8_2:+65983703 | Msa1262960:CDS |
| ACGATGGAGTTCATTATGGA+AGG | 0.561120 | 8_2:+65984639 | Msa1262960:CDS |
| CGGTGGATATGCAAGATCAC+TGG | 0.568207 | 8_2:+65984487 | Msa1262960:CDS |
| GAGCTTTGGAGAGTAATGGT+TGG | 0.569229 | 8_2:+65983958 | Msa1262960:CDS |
| TGATGTGAAAGATTAAAAGT+AGG | 0.572976 | 8_2:-65983174 | None:intergenic |
| TTATGAAGACAGTGAAGCAA+AGG | 0.574920 | 8_2:+65984420 | Msa1262960:CDS |
| ACAGTCTTAGAATCTTTACA+AGG | 0.577996 | 8_2:-65983402 | None:intergenic |
| ACCGGAGTTGCAAACTTGCA+AGG | 0.578553 | 8_2:+65983791 | Msa1262960:CDS |
| GACACTGTGATCATGAACTC+TGG | 0.580265 | 8_2:+65984317 | Msa1262960:CDS |
| ATCGTGGAAATCTAGACCGT+TGG | 0.580576 | 8_2:+65983578 | Msa1262960:CDS |
| CGATGGAGTTCATTATGGAA+GGG | 0.582766 | 8_2:+65984640 | Msa1262960:CDS |
| CCAATCTTTCAGGGGAATCG+TGG | 0.584316 | 8_2:+65983562 | Msa1262960:CDS |
| AGCATTGGATGATTCGGGGA+AGG | 0.584401 | 8_2:+65983509 | Msa1262960:CDS |
| GGGCTCCGGCAAAGATGAAG+TGG | 0.588980 | 8_2:+65984660 | Msa1262960:CDS |
| AGTTCATTATGGAAGGGCTC+CGG | 0.589216 | 8_2:+65984646 | Msa1262960:CDS |
| GTAGATACCGATGCCTAGCA+TGG | 0.591261 | 8_2:+65983895 | Msa1262960:CDS |
| CAGTGATCTTGCATATCCAC+CGG | 0.591430 | 8_2:-65984486 | None:intergenic |
| ATGAACTCTGGCTTGCATGA+CGG | 0.591911 | 8_2:+65984329 | Msa1262960:CDS |
| AGTGTACGAGCATTCTCTGC+GGG | 0.593570 | 8_2:+65984365 | Msa1262960:CDS |
| TGCAAGGAAAATCCCATGCT+AGG | 0.595420 | 8_2:-65983908 | None:intergenic |
| AAGTAACATTAACAGAAACA+TGG | 0.596059 | 8_2:-65983245 | None:intergenic |
| TTTGAAAGGGATGTTTGGTG+TGG | 0.597726 | 8_2:+65983822 | Msa1262960:CDS |
| GTTGGATTCACTAAAAGATG+AGG | 0.598512 | 8_2:+65984247 | Msa1262960:CDS |
| GACTGCATCATTGGTAATGA+CGG | 0.600760 | 8_2:+65983873 | Msa1262960:CDS |
| TTGCTAAAATCTTTCACCAA+CGG | 0.600940 | 8_2:-65983594 | None:intergenic |
| GAAAATCCCATGCTAGGCAT+CGG | 0.602023 | 8_2:-65983902 | None:intergenic |
| CCGAACAGTTTGAGACGGAT+CGG | 0.604067 | 8_2:-65984174 | None:intergenic |
| TGTGGAAGGTGGACAAGGCA+TGG | 0.606494 | 8_2:+65983840 | Msa1262960:CDS |
| TTGGATTCACTAAAAGATGA+GGG | 0.607104 | 8_2:+65984248 | Msa1262960:CDS |
| GGGAAGGCTCGATGTTTAGG+TGG | 0.613955 | 8_2:+65983525 | Msa1262960:CDS |
| AGTAACATTAACAGAAACAT+GGG | 0.614298 | 8_2:-65983244 | None:intergenic |
| AATGAACTCCATCGTTACAT+CGG | 0.624481 | 8_2:-65984631 | None:intergenic |
| TTTGATAACCGATGTAACGA+TGG | 0.632430 | 8_2:+65984623 | Msa1262960:CDS |
| GTAATCCGAACAGTTTGAGA+CGG | 0.632768 | 8_2:-65984179 | None:intergenic |
| TTTGGTGTGGAAGGTGGACA+AGG | 0.634168 | 8_2:+65983835 | Msa1262960:CDS |
| CATTAGATTCTACAAGAACG+AGG | 0.635476 | 8_2:+65983761 | Msa1262960:CDS |
| GCTAGATGGTTAGCTAAGGG+AGG | 0.635774 | 8_2:+65983375 | Msa1262960:CDS |
| TAGATACCGATGCCTAGCAT+GGG | 0.637333 | 8_2:+65983896 | Msa1262960:CDS |
| TCACACCAGGGAGATTTGCA+AGG | 0.652518 | 8_2:-65983924 | None:intergenic |
| ATCAAAGTTATCAATCACGC+CGG | 0.659408 | 8_2:-65984582 | None:intergenic |
| ACTTTGATATGACATTTCCG+TGG | 0.660837 | 8_2:+65984597 | Msa1262960:CDS |
| TTCAAGCATTGGATGATTCG+GGG | 0.666148 | 8_2:+65983505 | Msa1262960:CDS |
| CATCGGTTATCAAAATGCCA+CGG | 0.669856 | 8_2:-65984614 | None:intergenic |
| ATTTAATCCTAACAAGATGG+AGG | 0.674342 | 8_2:+65984511 | Msa1262960:CDS |
| ATCATAAACAAATCTCCATG+GGG | 0.703316 | 8_2:-65983718 | None:intergenic |
| TAGTGTACGAGCATTCTCTG+CGG | 0.712569 | 8_2:+65984364 | Msa1262960:CDS |
| ATGAAGACAGTGAAGCAAAG+GGG | 0.716034 | 8_2:+65984422 | Msa1262960:CDS |
| CCTAACGAACCATCACACCA+GGG | 0.735089 | 8_2:-65983936 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTGATCTTCTAAACTAAT+AGG | - | chr8_2:65983210-65983229 | None:intergenic | 20.0% |
| !! | AATGAAACACAAAACTATTT+AGG | + | chr8_2:65984224-65984243 | Msa1262960:CDS | 20.0% |
| !! | ATGAAACACAAAACTATTTA+GGG | + | chr8_2:65984225-65984244 | Msa1262960:CDS | 20.0% |
| !!! | TTTTGATCTTCTAAACTAAT+AGG | - | chr8_2:65983210-65983229 | None:intergenic | 20.0% |
| !! | AATGAAACACAAAACTATTT+AGG | + | chr8_2:65984224-65984243 | Msa1262960:CDS | 20.0% |
| !! | ATGAAACACAAAACTATTTA+GGG | + | chr8_2:65984225-65984244 | Msa1262960:CDS | 20.0% |
| !! | TATTTGGAATGTTCATTGTT+TGG | + | chr8_2:65983070-65983089 | Msa1262960:CDS | 25.0% |
| !! | ACTGTTAAGAATGTTTTTCA+AGG | + | chr8_2:65983108-65983127 | Msa1262960:CDS | 25.0% |
| !!! | AGAATGTTTTTCAAGGTTTA+AGG | + | chr8_2:65983115-65983134 | Msa1262960:CDS | 25.0% |
| ! | TGATGTGAAAGATTAAAAGT+AGG | - | chr8_2:65983177-65983196 | None:intergenic | 25.0% |
| ! | AGTAACATTAACAGAAACAT+GGG | - | chr8_2:65983247-65983266 | None:intergenic | 25.0% |
| ! | AAGTAACATTAACAGAAACA+TGG | - | chr8_2:65983248-65983267 | None:intergenic | 25.0% |
| ! | TAACAAGATCAATACTTTCT+AGG | - | chr8_2:65983293-65983312 | None:intergenic | 25.0% |
| ! | TTAAGAATAATGTTGCAACT+TGG | + | chr8_2:65983310-65983329 | Msa1262960:CDS | 25.0% |
| ! | TAAGAATAATGTTGCAACTT+GGG | + | chr8_2:65983311-65983330 | Msa1262960:CDS | 25.0% |
| !!! | TTTTATTTTAGATTTGCCTG+AGG | + | chr8_2:65984106-65984125 | Msa1262960:CDS | 25.0% |
| ! | AATTCATGTCAAATCTTCTT+GGG | - | chr8_2:65984142-65984161 | None:intergenic | 25.0% |
| ! | AAATTCATGTCAAATCTTCT+TGG | - | chr8_2:65984143-65984162 | None:intergenic | 25.0% |
| ! | CTTAGAAAAACTAAAGCAAA+CGG | + | chr8_2:65984550-65984569 | Msa1262960:CDS | 25.0% |
| ! | TTAGAAAAACTAAAGCAAAC+GGG | + | chr8_2:65984551-65984570 | Msa1262960:CDS | 25.0% |
| !! | AATTGGTCATGAATATTTTG+TGG | + | chr8_2:65984694-65984713 | Msa1262960:CDS | 25.0% |
| !! | TATTTGGAATGTTCATTGTT+TGG | + | chr8_2:65983070-65983089 | Msa1262960:CDS | 25.0% |
| !! | ACTGTTAAGAATGTTTTTCA+AGG | + | chr8_2:65983108-65983127 | Msa1262960:CDS | 25.0% |
| !!! | AGAATGTTTTTCAAGGTTTA+AGG | + | chr8_2:65983115-65983134 | Msa1262960:CDS | 25.0% |
| ! | TGATGTGAAAGATTAAAAGT+AGG | - | chr8_2:65983177-65983196 | None:intergenic | 25.0% |
| ! | AGTAACATTAACAGAAACAT+GGG | - | chr8_2:65983247-65983266 | None:intergenic | 25.0% |
| ! | AAGTAACATTAACAGAAACA+TGG | - | chr8_2:65983248-65983267 | None:intergenic | 25.0% |
| ! | TAACAAGATCAATACTTTCT+AGG | - | chr8_2:65983293-65983312 | None:intergenic | 25.0% |
| ! | TTAAGAATAATGTTGCAACT+TGG | + | chr8_2:65983310-65983329 | Msa1262960:CDS | 25.0% |
| ! | TAAGAATAATGTTGCAACTT+GGG | + | chr8_2:65983311-65983330 | Msa1262960:CDS | 25.0% |
| !!! | TTTTATTTTAGATTTGCCTG+AGG | + | chr8_2:65984106-65984125 | Msa1262960:CDS | 25.0% |
| ! | AATTCATGTCAAATCTTCTT+GGG | - | chr8_2:65984142-65984161 | None:intergenic | 25.0% |
| ! | AAATTCATGTCAAATCTTCT+TGG | - | chr8_2:65984143-65984162 | None:intergenic | 25.0% |
| ! | CTTAGAAAAACTAAAGCAAA+CGG | + | chr8_2:65984550-65984569 | Msa1262960:CDS | 25.0% |
| ! | TTAGAAAAACTAAAGCAAAC+GGG | + | chr8_2:65984551-65984570 | Msa1262960:CDS | 25.0% |
| !! | AATTGGTCATGAATATTTTG+TGG | + | chr8_2:65984694-65984713 | Msa1262960:CDS | 25.0% |
| TGTGAAAGATTAAAAGTAGG+AGG | - | chr8_2:65983174-65983193 | None:intergenic | 30.0% | |
| !! | CTTCAAATCTTTTAGCTAGA+TGG | + | chr8_2:65983361-65983380 | Msa1262960:CDS | 30.0% |
| ACAGTCTTAGAATCTTTACA+AGG | - | chr8_2:65983405-65983424 | None:intergenic | 30.0% | |
| !!! | TGAATTTGGTTTTCAAGCAT+TGG | + | chr8_2:65983494-65983513 | Msa1262960:CDS | 30.0% |
| !!! | TTTTCAAGCATTGGATGATT+CGG | + | chr8_2:65983503-65983522 | Msa1262960:CDS | 30.0% |
| !!! | TATTTTGAGACCAATCTTTC+AGG | + | chr8_2:65983552-65983571 | Msa1262960:CDS | 30.0% |
| !!! | ATTTTGAGACCAATCTTTCA+GGG | + | chr8_2:65983553-65983572 | Msa1262960:CDS | 30.0% |
| TTGCTAAAATCTTTCACCAA+CGG | - | chr8_2:65983597-65983616 | None:intergenic | 30.0% | |
| !! | TTGGTGAAAGATTTTAGCAA+TGG | + | chr8_2:65983597-65983616 | Msa1262960:CDS | 30.0% |
| ! | AAGTTCATCCTGATTTTGTT+GGG | + | chr8_2:65983640-65983659 | Msa1262960:CDS | 30.0% |
| TTATAAACCCCAACAAAATC+AGG | - | chr8_2:65983651-65983670 | None:intergenic | 30.0% | |
| TTGCTTTATAGACACTTTGA+AGG | + | chr8_2:65983684-65983703 | Msa1262960:CDS | 30.0% | |
| ATCATAAACAAATCTCCATG+GGG | - | chr8_2:65983721-65983740 | None:intergenic | 30.0% | |
| GATCATAAACAAATCTCCAT+GGG | - | chr8_2:65983722-65983741 | None:intergenic | 30.0% | |
| ! | GAGATTTGTTTATGATCGAA+TGG | + | chr8_2:65983725-65983744 | Msa1262960:CDS | 30.0% |
| ! | AACACAAAACTATTTAGGGT+TGG | + | chr8_2:65984229-65984248 | Msa1262960:CDS | 30.0% |
| TTGGATTCACTAAAAGATGA+GGG | + | chr8_2:65984248-65984267 | Msa1262960:CDS | 30.0% | |
| ATTTAATCCTAACAAGATGG+AGG | + | chr8_2:65984511-65984530 | Msa1262960:CDS | 30.0% | |
| TGTGAAAGATTAAAAGTAGG+AGG | - | chr8_2:65983174-65983193 | None:intergenic | 30.0% | |
| !! | CTTCAAATCTTTTAGCTAGA+TGG | + | chr8_2:65983361-65983380 | Msa1262960:CDS | 30.0% |
| ACAGTCTTAGAATCTTTACA+AGG | - | chr8_2:65983405-65983424 | None:intergenic | 30.0% | |
| !!! | TGAATTTGGTTTTCAAGCAT+TGG | + | chr8_2:65983494-65983513 | Msa1262960:CDS | 30.0% |
| !!! | TTTTCAAGCATTGGATGATT+CGG | + | chr8_2:65983503-65983522 | Msa1262960:CDS | 30.0% |
| !!! | TATTTTGAGACCAATCTTTC+AGG | + | chr8_2:65983552-65983571 | Msa1262960:CDS | 30.0% |
| !!! | ATTTTGAGACCAATCTTTCA+GGG | + | chr8_2:65983553-65983572 | Msa1262960:CDS | 30.0% |
| TTGCTAAAATCTTTCACCAA+CGG | - | chr8_2:65983597-65983616 | None:intergenic | 30.0% | |
| !! | TTGGTGAAAGATTTTAGCAA+TGG | + | chr8_2:65983597-65983616 | Msa1262960:CDS | 30.0% |
| ! | AAGTTCATCCTGATTTTGTT+GGG | + | chr8_2:65983640-65983659 | Msa1262960:CDS | 30.0% |
| TTATAAACCCCAACAAAATC+AGG | - | chr8_2:65983651-65983670 | None:intergenic | 30.0% | |
| TTGCTTTATAGACACTTTGA+AGG | + | chr8_2:65983684-65983703 | Msa1262960:CDS | 30.0% | |
| ATCATAAACAAATCTCCATG+GGG | - | chr8_2:65983721-65983740 | None:intergenic | 30.0% | |
| GATCATAAACAAATCTCCAT+GGG | - | chr8_2:65983722-65983741 | None:intergenic | 30.0% | |
| ! | GAGATTTGTTTATGATCGAA+TGG | + | chr8_2:65983725-65983744 | Msa1262960:CDS | 30.0% |
| ! | AACACAAAACTATTTAGGGT+TGG | + | chr8_2:65984229-65984248 | Msa1262960:CDS | 30.0% |
| TTGGATTCACTAAAAGATGA+GGG | + | chr8_2:65984248-65984267 | Msa1262960:CDS | 30.0% | |
| ATTTAATCCTAACAAGATGG+AGG | + | chr8_2:65984511-65984530 | Msa1262960:CDS | 30.0% | |
| ! | ATCGAAGTAACAACCTTTTC+TGG | - | chr8_2:65983006-65983025 | None:intergenic | 35.0% |
| ! | AATTGGGTTACTCACTGTTT+TGG | + | chr8_2:65983044-65983063 | Msa1262960:CDS | 35.0% |
| !!! | CTCACTGTTTTGGTTCTATT+TGG | + | chr8_2:65983054-65983073 | Msa1262960:CDS | 35.0% |
| !! | TTCATTGTTTGGAGCATTGA+TGG | + | chr8_2:65983081-65983100 | Msa1262960:CDS | 35.0% |
| ! | ACAGAAACATGGGTATTGTT+GGG | - | chr8_2:65983237-65983256 | None:intergenic | 35.0% |
| ! | AACAGAAACATGGGTATTGT+TGG | - | chr8_2:65983238-65983257 | None:intergenic | 35.0% |
| ! | TTTAGCTAGATGGTTAGCTA+AGG | + | chr8_2:65983371-65983390 | Msa1262960:CDS | 35.0% |
| ! | TTAGCTAGATGGTTAGCTAA+GGG | + | chr8_2:65983372-65983391 | Msa1262960:CDS | 35.0% |
| ACTGTTGAGATTTCAATTCC+TGG | + | chr8_2:65983420-65983439 | Msa1262960:CDS | 35.0% | |
| TGAGATTTCAATTCCTGGAT+TGG | + | chr8_2:65983425-65983444 | Msa1262960:CDS | 35.0% | |
| ! | ATTCCTGGATTGGATTTGAA+TGG | + | chr8_2:65983435-65983454 | Msa1262960:CDS | 35.0% |
| AGTTTGATAGAGTTATCAGC+TGG | + | chr8_2:65983462-65983481 | Msa1262960:CDS | 35.0% | |
| GCTGGAGATATACATGAATT+TGG | + | chr8_2:65983480-65983499 | Msa1262960:CDS | 35.0% | |
| !! | TTTCAAGCATTGGATGATTC+GGG | + | chr8_2:65983504-65983523 | Msa1262960:CDS | 35.0% |
| !!! | TTTTGAGACCAATCTTTCAG+GGG | + | chr8_2:65983554-65983573 | Msa1262960:CDS | 35.0% |
| ! | CAAGTTCATCCTGATTTTGT+TGG | + | chr8_2:65983639-65983658 | Msa1262960:CDS | 35.0% |
| ! | AGTTCATCCTGATTTTGTTG+GGG | + | chr8_2:65983641-65983660 | Msa1262960:CDS | 35.0% |
| CGATCATAAACAAATCTCCA+TGG | - | chr8_2:65983723-65983742 | None:intergenic | 35.0% | |
| CTCGTTCTTGTAGAATCTAA+TGG | - | chr8_2:65983763-65983782 | None:intergenic | 35.0% | |
| CATTAGATTCTACAAGAACG+AGG | + | chr8_2:65983761-65983780 | Msa1262960:CDS | 35.0% | |
| !! | CTGATTTTGAAAGGGATGTT+TGG | + | chr8_2:65983817-65983836 | Msa1262960:CDS | 35.0% |
| !! | AGAATCGATGGATTTTCTTC+TGG | + | chr8_2:65984042-65984061 | Msa1262960:CDS | 35.0% |
| !! | GAATCGATGGATTTTCTTCT+GGG | + | chr8_2:65984043-65984062 | Msa1262960:CDS | 35.0% |
| !! | AATCGATGGATTTTCTTCTG+GGG | + | chr8_2:65984044-65984063 | Msa1262960:CDS | 35.0% |
| GTTGGATTCACTAAAAGATG+AGG | + | chr8_2:65984247-65984266 | Msa1262960:CDS | 35.0% | |
| ! | AGACTATGCAGCATCTTTTT+GGG | + | chr8_2:65984391-65984410 | Msa1262960:CDS | 35.0% |
| TTATGAAGACAGTGAAGCAA+AGG | + | chr8_2:65984420-65984439 | Msa1262960:CDS | 35.0% | |
| TATGAAGACAGTGAAGCAAA+GGG | + | chr8_2:65984421-65984440 | Msa1262960:CDS | 35.0% | |
| GGCATTTAATCCTAACAAGA+TGG | + | chr8_2:65984508-65984527 | Msa1262960:CDS | 35.0% | |
| ATCAAAGTTATCAATCACGC+CGG | - | chr8_2:65984585-65984604 | None:intergenic | 35.0% | |
| ACTTTGATATGACATTTCCG+TGG | + | chr8_2:65984597-65984616 | Msa1262960:CDS | 35.0% | |
| ! | TTTGATAACCGATGTAACGA+TGG | + | chr8_2:65984623-65984642 | Msa1262960:CDS | 35.0% |
| AATGAACTCCATCGTTACAT+CGG | - | chr8_2:65984634-65984653 | None:intergenic | 35.0% | |
| TGTAACGATGGAGTTCATTA+TGG | + | chr8_2:65984635-65984654 | Msa1262960:CDS | 35.0% | |
| AAGTGGAAAGATGGTCAAAT+TGG | + | chr8_2:65984677-65984696 | Msa1262960:CDS | 35.0% | |
| ! | ATCGAAGTAACAACCTTTTC+TGG | - | chr8_2:65983006-65983025 | None:intergenic | 35.0% |
| ! | AATTGGGTTACTCACTGTTT+TGG | + | chr8_2:65983044-65983063 | Msa1262960:CDS | 35.0% |
| !!! | CTCACTGTTTTGGTTCTATT+TGG | + | chr8_2:65983054-65983073 | Msa1262960:CDS | 35.0% |
| !! | TTCATTGTTTGGAGCATTGA+TGG | + | chr8_2:65983081-65983100 | Msa1262960:CDS | 35.0% |
| ! | ACAGAAACATGGGTATTGTT+GGG | - | chr8_2:65983237-65983256 | None:intergenic | 35.0% |
| ! | AACAGAAACATGGGTATTGT+TGG | - | chr8_2:65983238-65983257 | None:intergenic | 35.0% |
| ! | TTTAGCTAGATGGTTAGCTA+AGG | + | chr8_2:65983371-65983390 | Msa1262960:CDS | 35.0% |
| ! | TTAGCTAGATGGTTAGCTAA+GGG | + | chr8_2:65983372-65983391 | Msa1262960:CDS | 35.0% |
| ACTGTTGAGATTTCAATTCC+TGG | + | chr8_2:65983420-65983439 | Msa1262960:CDS | 35.0% | |
| TGAGATTTCAATTCCTGGAT+TGG | + | chr8_2:65983425-65983444 | Msa1262960:CDS | 35.0% | |
| ! | ATTCCTGGATTGGATTTGAA+TGG | + | chr8_2:65983435-65983454 | Msa1262960:CDS | 35.0% |
| AGTTTGATAGAGTTATCAGC+TGG | + | chr8_2:65983462-65983481 | Msa1262960:CDS | 35.0% | |
| GCTGGAGATATACATGAATT+TGG | + | chr8_2:65983480-65983499 | Msa1262960:CDS | 35.0% | |
| !! | TTTCAAGCATTGGATGATTC+GGG | + | chr8_2:65983504-65983523 | Msa1262960:CDS | 35.0% |
| !!! | TTTTGAGACCAATCTTTCAG+GGG | + | chr8_2:65983554-65983573 | Msa1262960:CDS | 35.0% |
| ! | CAAGTTCATCCTGATTTTGT+TGG | + | chr8_2:65983639-65983658 | Msa1262960:CDS | 35.0% |
| ! | AGTTCATCCTGATTTTGTTG+GGG | + | chr8_2:65983641-65983660 | Msa1262960:CDS | 35.0% |
| CGATCATAAACAAATCTCCA+TGG | - | chr8_2:65983723-65983742 | None:intergenic | 35.0% | |
| CTCGTTCTTGTAGAATCTAA+TGG | - | chr8_2:65983763-65983782 | None:intergenic | 35.0% | |
| CATTAGATTCTACAAGAACG+AGG | + | chr8_2:65983761-65983780 | Msa1262960:CDS | 35.0% | |
| !! | CTGATTTTGAAAGGGATGTT+TGG | + | chr8_2:65983817-65983836 | Msa1262960:CDS | 35.0% |
| !! | AGAATCGATGGATTTTCTTC+TGG | + | chr8_2:65984042-65984061 | Msa1262960:CDS | 35.0% |
| !! | GAATCGATGGATTTTCTTCT+GGG | + | chr8_2:65984043-65984062 | Msa1262960:CDS | 35.0% |
| !! | AATCGATGGATTTTCTTCTG+GGG | + | chr8_2:65984044-65984063 | Msa1262960:CDS | 35.0% |
| GTTGGATTCACTAAAAGATG+AGG | + | chr8_2:65984247-65984266 | Msa1262960:CDS | 35.0% | |
| ! | AGACTATGCAGCATCTTTTT+GGG | + | chr8_2:65984391-65984410 | Msa1262960:CDS | 35.0% |
| TTATGAAGACAGTGAAGCAA+AGG | + | chr8_2:65984420-65984439 | Msa1262960:CDS | 35.0% | |
| TATGAAGACAGTGAAGCAAA+GGG | + | chr8_2:65984421-65984440 | Msa1262960:CDS | 35.0% | |
| GGCATTTAATCCTAACAAGA+TGG | + | chr8_2:65984508-65984527 | Msa1262960:CDS | 35.0% | |
| ATCAAAGTTATCAATCACGC+CGG | - | chr8_2:65984585-65984604 | None:intergenic | 35.0% | |
| ACTTTGATATGACATTTCCG+TGG | + | chr8_2:65984597-65984616 | Msa1262960:CDS | 35.0% | |
| ! | TTTGATAACCGATGTAACGA+TGG | + | chr8_2:65984623-65984642 | Msa1262960:CDS | 35.0% |
| AATGAACTCCATCGTTACAT+CGG | - | chr8_2:65984634-65984653 | None:intergenic | 35.0% | |
| TGTAACGATGGAGTTCATTA+TGG | + | chr8_2:65984635-65984654 | Msa1262960:CDS | 35.0% | |
| AAGTGGAAAGATGGTCAAAT+TGG | + | chr8_2:65984677-65984696 | Msa1262960:CDS | 35.0% | |
| CTTCGATTCCTATGCATCAA+TGG | + | chr8_2:65983019-65983038 | Msa1262960:CDS | 40.0% | |
| CTATGCATCAATGGCGAATT+GGG | + | chr8_2:65983028-65983047 | Msa1262960:CDS | 40.0% | |
| ! | AAACATGGGTATTGTTGGGT+TGG | - | chr8_2:65983233-65983252 | None:intergenic | 40.0% |
| TCACCATTCAAATCCAATCC+AGG | - | chr8_2:65983441-65983460 | None:intergenic | 40.0% | |
| !! | TTCAAGCATTGGATGATTCG+GGG | + | chr8_2:65983505-65983524 | Msa1262960:CDS | 40.0% |
| ! | AAGGTTTGAAGTTTACCCCA+TGG | + | chr8_2:65983703-65983722 | Msa1262960:CDS | 40.0% |
| ! | CAAGAACGAGGTTTTCATAC+CGG | + | chr8_2:65983773-65983792 | Msa1262960:CDS | 40.0% |
| !!! | CAAGGCTGCTGATTTTGAAA+GGG | + | chr8_2:65983809-65983828 | Msa1262960:CDS | 40.0% |
| ! | TTTGAAAGGGATGTTTGGTG+TGG | + | chr8_2:65983822-65983841 | Msa1262960:CDS | 40.0% |
| !! | GACTGCATCATTGGTAATGA+CGG | + | chr8_2:65983873-65983892 | Msa1262960:CDS | 40.0% |
| ! | ATTTTCCTTGCAAATCTCCC+TGG | + | chr8_2:65983919-65983938 | Msa1262960:CDS | 40.0% |
| !! | TTAGGAGCTTTGGAGAGTAA+TGG | + | chr8_2:65983954-65983973 | Msa1262960:CDS | 40.0% |
| !! | AGCTTTGGAGAGTAATGGTT+GGG | + | chr8_2:65983959-65983978 | Msa1262960:CDS | 40.0% |
| TTCTTCAAGCAATTCCAAGC+AGG | - | chr8_2:65984026-65984045 | None:intergenic | 40.0% | |
| GGAATTGCTTGAAGAATCGA+TGG | + | chr8_2:65984030-65984049 | Msa1262960:CDS | 40.0% | |
| GTAATCCGAACAGTTTGAGA+CGG | - | chr8_2:65984182-65984201 | None:intergenic | 40.0% | |
| CGGATTACAAGCATCTTCAA+TGG | + | chr8_2:65984194-65984213 | Msa1262960:CDS | 40.0% | |
| CAAGCATCTTCAATGGTCAT+TGG | + | chr8_2:65984201-65984220 | Msa1262960:CDS | 40.0% | |
| ! | CAGACTATGCAGCATCTTTT+TGG | + | chr8_2:65984390-65984409 | Msa1262960:CDS | 40.0% |
| ATGAAGACAGTGAAGCAAAG+GGG | + | chr8_2:65984422-65984441 | Msa1262960:CDS | 40.0% | |
| GTATTCCGGTAAAACACTCT+TGG | - | chr8_2:65984458-65984477 | None:intergenic | 40.0% | |
| TTGAACACCTCCATCTTGTT+AGG | - | chr8_2:65984521-65984540 | None:intergenic | 40.0% | |
| !! | AACAAGATGGAGGTGTTCAA+TGG | + | chr8_2:65984521-65984540 | Msa1262960:CDS | 40.0% |
| ! | CATCGGTTATCAAAATGCCA+CGG | - | chr8_2:65984617-65984636 | None:intergenic | 40.0% |
| ACGATGGAGTTCATTATGGA+AGG | + | chr8_2:65984639-65984658 | Msa1262960:CDS | 40.0% | |
| CGATGGAGTTCATTATGGAA+GGG | + | chr8_2:65984640-65984659 | Msa1262960:CDS | 40.0% | |
| TCTTTCCACTTCATCTTTGC+CGG | - | chr8_2:65984668-65984687 | None:intergenic | 40.0% | |
| GCAAAGATGAAGTGGAAAGA+TGG | + | chr8_2:65984668-65984687 | Msa1262960:CDS | 40.0% | |
| CTTCGATTCCTATGCATCAA+TGG | + | chr8_2:65983019-65983038 | Msa1262960:CDS | 40.0% | |
| CTATGCATCAATGGCGAATT+GGG | + | chr8_2:65983028-65983047 | Msa1262960:CDS | 40.0% | |
| ! | AAACATGGGTATTGTTGGGT+TGG | - | chr8_2:65983233-65983252 | None:intergenic | 40.0% |
| TCACCATTCAAATCCAATCC+AGG | - | chr8_2:65983441-65983460 | None:intergenic | 40.0% | |
| !! | TTCAAGCATTGGATGATTCG+GGG | + | chr8_2:65983505-65983524 | Msa1262960:CDS | 40.0% |
| ! | AAGGTTTGAAGTTTACCCCA+TGG | + | chr8_2:65983703-65983722 | Msa1262960:CDS | 40.0% |
| ! | CAAGAACGAGGTTTTCATAC+CGG | + | chr8_2:65983773-65983792 | Msa1262960:CDS | 40.0% |
| !!! | CAAGGCTGCTGATTTTGAAA+GGG | + | chr8_2:65983809-65983828 | Msa1262960:CDS | 40.0% |
| ! | TTTGAAAGGGATGTTTGGTG+TGG | + | chr8_2:65983822-65983841 | Msa1262960:CDS | 40.0% |
| !! | GACTGCATCATTGGTAATGA+CGG | + | chr8_2:65983873-65983892 | Msa1262960:CDS | 40.0% |
| ! | ATTTTCCTTGCAAATCTCCC+TGG | + | chr8_2:65983919-65983938 | Msa1262960:CDS | 40.0% |
| !! | TTAGGAGCTTTGGAGAGTAA+TGG | + | chr8_2:65983954-65983973 | Msa1262960:CDS | 40.0% |
| !! | AGCTTTGGAGAGTAATGGTT+GGG | + | chr8_2:65983959-65983978 | Msa1262960:CDS | 40.0% |
| TTCTTCAAGCAATTCCAAGC+AGG | - | chr8_2:65984026-65984045 | None:intergenic | 40.0% | |
| GGAATTGCTTGAAGAATCGA+TGG | + | chr8_2:65984030-65984049 | Msa1262960:CDS | 40.0% | |
| GTAATCCGAACAGTTTGAGA+CGG | - | chr8_2:65984182-65984201 | None:intergenic | 40.0% | |
| CGGATTACAAGCATCTTCAA+TGG | + | chr8_2:65984194-65984213 | Msa1262960:CDS | 40.0% | |
| CAAGCATCTTCAATGGTCAT+TGG | + | chr8_2:65984201-65984220 | Msa1262960:CDS | 40.0% | |
| ! | CAGACTATGCAGCATCTTTT+TGG | + | chr8_2:65984390-65984409 | Msa1262960:CDS | 40.0% |
| ATGAAGACAGTGAAGCAAAG+GGG | + | chr8_2:65984422-65984441 | Msa1262960:CDS | 40.0% | |
| GTATTCCGGTAAAACACTCT+TGG | - | chr8_2:65984458-65984477 | None:intergenic | 40.0% | |
| TTGAACACCTCCATCTTGTT+AGG | - | chr8_2:65984521-65984540 | None:intergenic | 40.0% | |
| !! | AACAAGATGGAGGTGTTCAA+TGG | + | chr8_2:65984521-65984540 | Msa1262960:CDS | 40.0% |
| ! | CATCGGTTATCAAAATGCCA+CGG | - | chr8_2:65984617-65984636 | None:intergenic | 40.0% |
| ACGATGGAGTTCATTATGGA+AGG | + | chr8_2:65984639-65984658 | Msa1262960:CDS | 40.0% | |
| CGATGGAGTTCATTATGGAA+GGG | + | chr8_2:65984640-65984659 | Msa1262960:CDS | 40.0% | |
| TCTTTCCACTTCATCTTTGC+CGG | - | chr8_2:65984668-65984687 | None:intergenic | 40.0% | |
| GCAAAGATGAAGTGGAAAGA+TGG | + | chr8_2:65984668-65984687 | Msa1262960:CDS | 40.0% | |
| CCAATTCGCCATTGATGCAT+AGG | - | chr8_2:65983030-65983049 | None:intergenic | 45.0% | |
| CCTATGCATCAATGGCGAAT+TGG | + | chr8_2:65983027-65983046 | Msa1262960:CDS | 45.0% | |
| ATCGTGGAAATCTAGACCGT+TGG | + | chr8_2:65983578-65983597 | Msa1262960:CDS | 45.0% | |
| !!! | GCAAGGCTGCTGATTTTGAA+AGG | + | chr8_2:65983808-65983827 | Msa1262960:CDS | 45.0% |
| !! | AAAGGGATGTTTGGTGTGGA+AGG | + | chr8_2:65983826-65983845 | Msa1262960:CDS | 45.0% |
| AGGAATGACGACTGCATCAT+TGG | + | chr8_2:65983864-65983883 | Msa1262960:CDS | 45.0% | |
| TAGATACCGATGCCTAGCAT+GGG | + | chr8_2:65983896-65983915 | Msa1262960:CDS | 45.0% | |
| GAAAATCCCATGCTAGGCAT+CGG | - | chr8_2:65983905-65983924 | None:intergenic | 45.0% | |
| TGCAAGGAAAATCCCATGCT+AGG | - | chr8_2:65983911-65983930 | None:intergenic | 45.0% | |
| TGATGGTTCGTTAGGAGCTT+TGG | + | chr8_2:65983944-65983963 | Msa1262960:CDS | 45.0% | |
| !! | GAGCTTTGGAGAGTAATGGT+TGG | + | chr8_2:65983958-65983977 | Msa1262960:CDS | 45.0% |
| GAGTTCATGATCACAGTGTC+TGG | - | chr8_2:65984317-65984336 | None:intergenic | 45.0% | |
| GACACTGTGATCATGAACTC+TGG | + | chr8_2:65984317-65984336 | Msa1262960:CDS | 45.0% | |
| ! | ATGAACTCTGGCTTGCATGA+CGG | + | chr8_2:65984329-65984348 | Msa1262960:CDS | 45.0% |
| ATGCTCGTACACTACGAAAG+TGG | - | chr8_2:65984358-65984377 | None:intergenic | 45.0% | |
| TAGTGTACGAGCATTCTCTG+CGG | + | chr8_2:65984364-65984383 | Msa1262960:CDS | 45.0% | |
| !!! | CACTGCCAAGAGTGTTTTAC+CGG | + | chr8_2:65984450-65984469 | Msa1262960:CDS | 45.0% |
| CAGTGATCTTGCATATCCAC+CGG | - | chr8_2:65984489-65984508 | None:intergenic | 45.0% | |
| AGTTCATTATGGAAGGGCTC+CGG | + | chr8_2:65984646-65984665 | Msa1262960:CDS | 45.0% | |
| CCAATTCGCCATTGATGCAT+AGG | - | chr8_2:65983030-65983049 | None:intergenic | 45.0% | |
| CCTATGCATCAATGGCGAAT+TGG | + | chr8_2:65983027-65983046 | Msa1262960:CDS | 45.0% | |
| ATCGTGGAAATCTAGACCGT+TGG | + | chr8_2:65983578-65983597 | Msa1262960:CDS | 45.0% | |
| !!! | GCAAGGCTGCTGATTTTGAA+AGG | + | chr8_2:65983808-65983827 | Msa1262960:CDS | 45.0% |
| !! | AAAGGGATGTTTGGTGTGGA+AGG | + | chr8_2:65983826-65983845 | Msa1262960:CDS | 45.0% |
| AGGAATGACGACTGCATCAT+TGG | + | chr8_2:65983864-65983883 | Msa1262960:CDS | 45.0% | |
| TAGATACCGATGCCTAGCAT+GGG | + | chr8_2:65983896-65983915 | Msa1262960:CDS | 45.0% | |
| GAAAATCCCATGCTAGGCAT+CGG | - | chr8_2:65983905-65983924 | None:intergenic | 45.0% | |
| TGCAAGGAAAATCCCATGCT+AGG | - | chr8_2:65983911-65983930 | None:intergenic | 45.0% | |
| TGATGGTTCGTTAGGAGCTT+TGG | + | chr8_2:65983944-65983963 | Msa1262960:CDS | 45.0% | |
| !! | GAGCTTTGGAGAGTAATGGT+TGG | + | chr8_2:65983958-65983977 | Msa1262960:CDS | 45.0% |
| GAGTTCATGATCACAGTGTC+TGG | - | chr8_2:65984317-65984336 | None:intergenic | 45.0% | |
| GACACTGTGATCATGAACTC+TGG | + | chr8_2:65984317-65984336 | Msa1262960:CDS | 45.0% | |
| ! | ATGAACTCTGGCTTGCATGA+CGG | + | chr8_2:65984329-65984348 | Msa1262960:CDS | 45.0% |
| ATGCTCGTACACTACGAAAG+TGG | - | chr8_2:65984358-65984377 | None:intergenic | 45.0% | |
| TAGTGTACGAGCATTCTCTG+CGG | + | chr8_2:65984364-65984383 | Msa1262960:CDS | 45.0% | |
| !!! | CACTGCCAAGAGTGTTTTAC+CGG | + | chr8_2:65984450-65984469 | Msa1262960:CDS | 45.0% |
| CAGTGATCTTGCATATCCAC+CGG | - | chr8_2:65984489-65984508 | None:intergenic | 45.0% | |
| AGTTCATTATGGAAGGGCTC+CGG | + | chr8_2:65984646-65984665 | Msa1262960:CDS | 45.0% | |
| ! | GCTAGATGGTTAGCTAAGGG+AGG | + | chr8_2:65983375-65983394 | Msa1262960:CDS | 50.0% |
| ! | AGCATTGGATGATTCGGGGA+AGG | + | chr8_2:65983509-65983528 | Msa1262960:CDS | 50.0% |
| CCACGATTCCCCTGAAAGAT+TGG | - | chr8_2:65983565-65983584 | None:intergenic | 50.0% | |
| CCAATCTTTCAGGGGAATCG+TGG | + | chr8_2:65983562-65983581 | Msa1262960:CDS | 50.0% | |
| ACCGGAGTTGCAAACTTGCA+AGG | + | chr8_2:65983791-65983810 | Msa1262960:CDS | 50.0% | |
| GCCTTGCAAGTTTGCAACTC+CGG | - | chr8_2:65983795-65983814 | None:intergenic | 50.0% | |
| ! | TTTGGTGTGGAAGGTGGACA+AGG | + | chr8_2:65983835-65983854 | Msa1262960:CDS | 50.0% |
| GTAGATACCGATGCCTAGCA+TGG | + | chr8_2:65983895-65983914 | Msa1262960:CDS | 50.0% | |
| TCACACCAGGGAGATTTGCA+AGG | - | chr8_2:65983927-65983946 | None:intergenic | 50.0% | |
| TGCAAATCTCCCTGGTGTGA+TGG | + | chr8_2:65983927-65983946 | Msa1262960:CDS | 50.0% | |
| CCTAACGAACCATCACACCA+GGG | - | chr8_2:65983939-65983958 | None:intergenic | 50.0% | |
| TCCTAACGAACCATCACACC+AGG | - | chr8_2:65983940-65983959 | None:intergenic | 50.0% | |
| TGTATTCAGCTGAGCCTGCT+TGG | + | chr8_2:65984009-65984028 | Msa1262960:CDS | 50.0% | |
| CTTGGGACAGAATGTACCTC+AGG | - | chr8_2:65984125-65984144 | None:intergenic | 50.0% | |
| ! | CCGAACAGTTTGAGACGGAT+CGG | - | chr8_2:65984177-65984196 | None:intergenic | 50.0% |
| CCGATCCGTCTCAAACTGTT+CGG | + | chr8_2:65984174-65984193 | Msa1262960:CDS | 50.0% | |
| AGTGTACGAGCATTCTCTGC+GGG | + | chr8_2:65984365-65984384 | Msa1262960:CDS | 50.0% | |
| GACAGTGAAGCAAAGGGGAT+TGG | + | chr8_2:65984427-65984446 | Msa1262960:CDS | 50.0% | |
| TACCGGAATACAGTCGCAAC+CGG | + | chr8_2:65984467-65984486 | Msa1262960:CDS | 50.0% | |
| CGGTGGATATGCAAGATCAC+TGG | + | chr8_2:65984487-65984506 | Msa1262960:CDS | 50.0% | |
| ! | AAGCAAACGGGCATTGTCTC+CGG | + | chr8_2:65984563-65984582 | Msa1262960:CDS | 50.0% |
| ! | GCTAGATGGTTAGCTAAGGG+AGG | + | chr8_2:65983375-65983394 | Msa1262960:CDS | 50.0% |
| ! | AGCATTGGATGATTCGGGGA+AGG | + | chr8_2:65983509-65983528 | Msa1262960:CDS | 50.0% |
| CCACGATTCCCCTGAAAGAT+TGG | - | chr8_2:65983565-65983584 | None:intergenic | 50.0% | |
| CCAATCTTTCAGGGGAATCG+TGG | + | chr8_2:65983562-65983581 | Msa1262960:CDS | 50.0% | |
| ACCGGAGTTGCAAACTTGCA+AGG | + | chr8_2:65983791-65983810 | Msa1262960:CDS | 50.0% | |
| GCCTTGCAAGTTTGCAACTC+CGG | - | chr8_2:65983795-65983814 | None:intergenic | 50.0% | |
| ! | TTTGGTGTGGAAGGTGGACA+AGG | + | chr8_2:65983835-65983854 | Msa1262960:CDS | 50.0% |
| GTAGATACCGATGCCTAGCA+TGG | + | chr8_2:65983895-65983914 | Msa1262960:CDS | 50.0% | |
| TCACACCAGGGAGATTTGCA+AGG | - | chr8_2:65983927-65983946 | None:intergenic | 50.0% | |
| TGCAAATCTCCCTGGTGTGA+TGG | + | chr8_2:65983927-65983946 | Msa1262960:CDS | 50.0% | |
| CCTAACGAACCATCACACCA+GGG | - | chr8_2:65983939-65983958 | None:intergenic | 50.0% | |
| TCCTAACGAACCATCACACC+AGG | - | chr8_2:65983940-65983959 | None:intergenic | 50.0% | |
| TGTATTCAGCTGAGCCTGCT+TGG | + | chr8_2:65984009-65984028 | Msa1262960:CDS | 50.0% | |
| CTTGGGACAGAATGTACCTC+AGG | - | chr8_2:65984125-65984144 | None:intergenic | 50.0% | |
| ! | CCGAACAGTTTGAGACGGAT+CGG | - | chr8_2:65984177-65984196 | None:intergenic | 50.0% |
| CCGATCCGTCTCAAACTGTT+CGG | + | chr8_2:65984174-65984193 | Msa1262960:CDS | 50.0% | |
| AGTGTACGAGCATTCTCTGC+GGG | + | chr8_2:65984365-65984384 | Msa1262960:CDS | 50.0% | |
| GACAGTGAAGCAAAGGGGAT+TGG | + | chr8_2:65984427-65984446 | Msa1262960:CDS | 50.0% | |
| TACCGGAATACAGTCGCAAC+CGG | + | chr8_2:65984467-65984486 | Msa1262960:CDS | 50.0% | |
| CGGTGGATATGCAAGATCAC+TGG | + | chr8_2:65984487-65984506 | Msa1262960:CDS | 50.0% | |
| ! | AAGCAAACGGGCATTGTCTC+CGG | + | chr8_2:65984563-65984582 | Msa1262960:CDS | 50.0% |
| TCGGGGAAGGCTCGATGTTT+AGG | + | chr8_2:65983522-65983541 | Msa1262960:CDS | 55.0% | |
| GGGAAGGCTCGATGTTTAGG+TGG | + | chr8_2:65983525-65983544 | Msa1262960:CDS | 55.0% | |
| !! | GGGATGTTTGGTGTGGAAGG+TGG | + | chr8_2:65983829-65983848 | Msa1262960:CDS | 55.0% |
| TGTGGAAGGTGGACAAGGCA+TGG | + | chr8_2:65983840-65983859 | Msa1262960:CDS | 55.0% | |
| CCCTGGTGTGATGGTTCGTT+AGG | + | chr8_2:65983936-65983955 | Msa1262960:CDS | 55.0% | |
| ! | CAGTTTGAGACGGATCGGCT+GGG | - | chr8_2:65984172-65984191 | None:intergenic | 55.0% |
| ! | ACAGTTTGAGACGGATCGGC+TGG | - | chr8_2:65984173-65984192 | None:intergenic | 55.0% |
| ! | CACCGGTTGCGACTGTATTC+CGG | - | chr8_2:65984472-65984491 | None:intergenic | 55.0% |
| TCGGGGAAGGCTCGATGTTT+AGG | + | chr8_2:65983522-65983541 | Msa1262960:CDS | 55.0% | |
| GGGAAGGCTCGATGTTTAGG+TGG | + | chr8_2:65983525-65983544 | Msa1262960:CDS | 55.0% | |
| !! | GGGATGTTTGGTGTGGAAGG+TGG | + | chr8_2:65983829-65983848 | Msa1262960:CDS | 55.0% |
| TGTGGAAGGTGGACAAGGCA+TGG | + | chr8_2:65983840-65983859 | Msa1262960:CDS | 55.0% | |
| CCCTGGTGTGATGGTTCGTT+AGG | + | chr8_2:65983936-65983955 | Msa1262960:CDS | 55.0% | |
| ! | CAGTTTGAGACGGATCGGCT+GGG | - | chr8_2:65984172-65984191 | None:intergenic | 55.0% |
| ! | ACAGTTTGAGACGGATCGGC+TGG | - | chr8_2:65984173-65984192 | None:intergenic | 55.0% |
| ! | CACCGGTTGCGACTGTATTC+CGG | - | chr8_2:65984472-65984491 | None:intergenic | 55.0% |
| GAAGGTGGACAAGGCATGGC+AGG | + | chr8_2:65983844-65983863 | Msa1262960:CDS | 60.0% | |
| CGGAATACAGTCGCAACCGG+TGG | + | chr8_2:65984470-65984489 | Msa1262960:CDS | 60.0% | |
| GGGCTCCGGCAAAGATGAAG+TGG | + | chr8_2:65984660-65984679 | Msa1262960:CDS | 60.0% | |
| GAAGGTGGACAAGGCATGGC+AGG | + | chr8_2:65983844-65983863 | Msa1262960:CDS | 60.0% | |
| CGGAATACAGTCGCAACCGG+TGG | + | chr8_2:65984470-65984489 | Msa1262960:CDS | 60.0% | |
| GGGCTCCGGCAAAGATGAAG+TGG | + | chr8_2:65984660-65984679 | Msa1262960:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 65983000 | 65984763 | 65983000 | ID=Msa1262960;Name=Msa1262960 |
| chr8_2 | mRNA | 65983000 | 65984763 | 65983000 | ID=Msa1262960-mRNA-1;Parent=Msa1262960;Name=Msa1262960-mRNA-1;_AED=0.25;_eAED=0.25;_QI=0|-1|0|1|-1|1|1|0|587 |
| chr8_2 | exon | 65983000 | 65984763 | 65983000 | ID=Msa1262960-mRNA-1:exon:21526;Parent=Msa1262960-mRNA-1 |
| chr8_2 | CDS | 65983000 | 65984763 | 65983000 | ID=Msa1262960-mRNA-1:cds;Parent=Msa1262960-mRNA-1 |
| Gene Sequence |
| Protein sequence |
