Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0697830 | A5JTQ3.1 | 98.837 | 774 | 9 | 0 | 1 | 774 | 1 | 774 | 0.0 | 1585 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0697830 | sp|A5JTQ3|XYL2_MEDSV | 98.837 | 774 | 9 | 0 | 1 | 774 | 1 | 774 | 0.0 | 1585 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0697830 | A0A072UQA9 | 98.062 | 774 | 15 | 0 | 1 | 774 | 1 | 774 | 0.0 | 1573 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0032980 | Msa0697830 | 0.818292 | 2.115549e-52 | -8.615850e-47 |
Msa0050150 | Msa0697830 | 0.804284 | 2.325331e-49 | -8.615850e-47 |
Msa0072520 | Msa0697830 | 0.824228 | 9.041465e-54 | -8.615850e-47 |
Msa0091350 | Msa0697830 | 0.831951 | 1.247524e-55 | -8.615850e-47 |
Msa0607800 | Msa0697830 | 0.826093 | 3.276859e-54 | -8.615850e-47 |
Msa0614550 | Msa0697830 | 0.871336 | 7.385659e-67 | -8.615850e-47 |
Msa0615630 | Msa0697830 | 0.813103 | 3.031951e-51 | -8.615850e-47 |
Msa0620500 | Msa0697830 | 0.807410 | 5.123883e-50 | -8.615850e-47 |
Msa0639190 | Msa0697830 | 0.840203 | 1.001721e-57 | -8.615850e-47 |
Msa0647440 | Msa0697830 | 0.808135 | 3.594376e-50 | -8.615850e-47 |
Msa0648040 | Msa0697830 | 0.825040 | 5.823211e-54 | -8.615850e-47 |
Msa0648760 | Msa0697830 | 0.807312 | 5.375487e-50 | -8.615850e-47 |
Msa0657210 | Msa0697830 | 0.806172 | 9.356809e-50 | -8.615850e-47 |
Msa0687090 | Msa0697830 | 0.801105 | 1.053255e-48 | -8.615850e-47 |
Msa0688380 | Msa0697830 | 0.821312 | 4.317440e-53 | -8.615850e-47 |
Msa0690320 | Msa0697830 | 0.805076 | 1.589616e-49 | -8.615850e-47 |
Msa0690740 | Msa0697830 | 0.823267 | 1.518374e-53 | -8.615850e-47 |
Msa0697830 | Msa0707260 | 0.809774 | 1.602434e-50 | -8.615850e-47 |
Msa0697830 | Msa0714520 | 0.842705 | 2.196043e-58 | -8.615850e-47 |
Msa0697830 | Msa0717900 | 0.802785 | 4.758042e-49 | -8.615850e-47 |
Msa0697830 | Msa0756330 | 0.808249 | 3.397713e-50 | -8.615850e-47 |
Msa0697830 | Msa0764770 | 0.810827 | 9.495299e-51 | -8.615850e-47 |
Msa0697830 | Msa0816080 | 0.826901 | 2.103954e-54 | -8.615850e-47 |
Msa0697830 | Msa0837680 | 0.821060 | 4.935606e-53 | -8.615850e-47 |
Msa0697830 | Msa0861440 | 0.835015 | 2.145097e-56 | -8.615850e-47 |
Msa0697830 | Msa0879920 | 0.800286 | 1.547512e-48 | -8.615850e-47 |
Msa0697830 | Msa1008670 | 0.807735 | 4.371327e-50 | -8.615850e-47 |
Msa0697830 | Msa1188340 | 0.818099 | 2.338754e-52 | -8.615850e-47 |
Msa0697830 | Msa1215980 | 0.808076 | 3.698877e-50 | -8.615850e-47 |
Msa0697830 | Msa1223390 | 0.814000 | 1.925173e-51 | -8.615850e-47 |
Msa0697830 | Msa1240940 | 0.836351 | 9.844096e-57 | -8.615850e-47 |
Msa0697830 | Msa1254540 | 0.808901 | 2.466730e-50 | -8.615850e-47 |
Msa0697830 | Msa1263740 | 0.821167 | 4.661474e-53 | -8.615850e-47 |
Msa0697830 | Msa1282300 | 0.851600 | 7.986493e-61 | -8.615850e-47 |
Msa0697830 | Msa1294460 | 0.832160 | 1.107746e-55 | -8.615850e-47 |
Msa0697830 | Msa1294790 | 0.826296 | 2.931715e-54 | -8.615850e-47 |
Msa0697830 | Msa1296860 | 0.804178 | 2.446995e-49 | -8.615850e-47 |
Msa0697830 | Msa1301820 | 0.805029 | 1.625997e-49 | -8.615850e-47 |
Msa0697830 | Msa1305920 | 0.810607 | 1.059732e-50 | -8.615850e-47 |
Msa0697830 | Msa1332950 | 0.812004 | 5.271348e-51 | -8.615850e-47 |
Msa0697830 | Msa1339170 | 0.801893 | 7.263388e-49 | -8.615850e-47 |
Msa0697830 | Msa1389820 | 0.826641 | 2.426998e-54 | -8.615850e-47 |
Msa0697830 | Msa1393560 | 0.816886 | 4.388167e-52 | -8.615850e-47 |
Msa0697830 | Msa1424590 | 0.811412 | 7.091578e-51 | -8.615850e-47 |
Msa0697830 | Msa1426320 | 0.819957 | 8.839203e-53 | -8.615850e-47 |
Msa0127340 | Msa0697830 | 0.816370 | 5.727034e-52 | -8.615850e-47 |
Msa0165830 | Msa0697830 | 0.803874 | 2.830794e-49 | -8.615850e-47 |
Msa0480730 | Msa0697830 | 0.800774 | 1.230879e-48 | -8.615850e-47 |
Msa0281540 | Msa0697830 | 0.816500 | 5.356023e-52 | -8.615850e-47 |
Msa0331110 | Msa0697830 | 0.811053 | 8.487202e-51 | -8.615850e-47 |
Msa0349550 | Msa0697830 | 0.808910 | 2.455083e-50 | -8.615850e-47 |
Msa0514020 | Msa0697830 | 0.804897 | 1.732926e-49 | -8.615850e-47 |
Msa0524320 | Msa0697830 | 0.802353 | 5.840992e-49 | -8.615850e-47 |
Msa0524430 | Msa0697830 | 0.807777 | 4.283501e-50 | -8.615850e-47 |
Msa0553750 | Msa0697830 | 0.848118 | 7.512035e-60 | -8.615850e-47 |
Msa0554300 | Msa0697830 | 0.809251 | 2.075474e-50 | -8.615850e-47 |
Msa0560570 | Msa0697830 | 0.854530 | 1.157384e-61 | -8.615850e-47 |
Msa0561560 | Msa0697830 | 0.803974 | 2.698635e-49 | -8.615850e-47 |
Msa0572830 | Msa0697830 | 0.831745 | 1.402241e-55 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0697830 | MtrunA17_Chr4g0050591 | 98.062 | 774 | 15 | 0 | 1 | 774 | 1 | 774 | 0.0 | 1573 |
Msa0697830 | MtrunA17_Chr2g0278761 | 84.645 | 775 | 118 | 1 | 1 | 774 | 1 | 775 | 0.0 | 1352 |
Msa0697830 | MtrunA17_Chr1g0194841 | 57.332 | 757 | 311 | 5 | 19 | 772 | 8 | 755 | 0.0 | 895 |
Msa0697830 | MtrunA17_Chr7g0269871 | 57.647 | 765 | 302 | 8 | 17 | 772 | 10 | 761 | 0.0 | 892 |
Msa0697830 | MtrunA17_Chr2g0294751 | 57.405 | 763 | 306 | 8 | 14 | 772 | 7 | 754 | 0.0 | 874 |
Msa0697830 | MtrunA17_Chr1g0207281 | 56.404 | 773 | 297 | 12 | 13 | 764 | 22 | 775 | 0.0 | 849 |
Msa0697830 | MtrunA17_Chr5g0411571 | 48.810 | 756 | 361 | 9 | 42 | 774 | 30 | 782 | 0.0 | 747 |
Msa0697830 | MtrunA17_Chr3g0115601 | 47.375 | 781 | 378 | 14 | 14 | 774 | 9 | 776 | 0.0 | 723 |
Msa0697830 | MtrunA17_Chr5g0425431 | 46.692 | 786 | 390 | 14 | 10 | 774 | 3 | 780 | 0.0 | 723 |
Msa0697830 | MtrunA17_Chr5g0425471 | 46.252 | 787 | 383 | 13 | 14 | 774 | 10 | 782 | 0.0 | 718 |
Msa0697830 | MtrunA17_Chr5g0425451 | 46.379 | 787 | 382 | 13 | 14 | 774 | 10 | 782 | 0.0 | 709 |
Msa0697830 | MtrunA17_Chr5g0425531 | 45.970 | 794 | 388 | 15 | 9 | 774 | 5 | 785 | 0.0 | 700 |
Msa0697830 | MtrunA17_Chr6g0461231 | 27.454 | 652 | 344 | 28 | 38 | 612 | 13 | 612 | 1.21e-40 | 158 |
Msa0697830 | MtrunA17_Chr6g0461191 | 26.997 | 626 | 349 | 26 | 54 | 612 | 28 | 612 | 1.48e-40 | 158 |
Msa0697830 | MtrunA17_Chr3g0118971 | 27.464 | 619 | 355 | 24 | 54 | 612 | 28 | 612 | 4.51e-38 | 150 |
Msa0697830 | MtrunA17_Chr6g0461221 | 25.844 | 681 | 377 | 28 | 38 | 641 | 14 | 643 | 4.85e-38 | 151 |
Msa0697830 | MtrunA17_Chr6g0461211 | 26.688 | 637 | 337 | 26 | 54 | 612 | 28 | 612 | 8.65e-38 | 150 |
Msa0697830 | MtrunA17_Chr3g0104081 | 25.373 | 603 | 352 | 21 | 54 | 593 | 22 | 589 | 1.86e-35 | 142 |
Msa0697830 | MtrunA17_Chr7g0253561 | 26.140 | 658 | 348 | 29 | 54 | 637 | 4 | 597 | 4.03e-35 | 141 |
Msa0697830 | MtrunA17_Chr2g0292341 | 27.367 | 676 | 348 | 28 | 54 | 648 | 30 | 643 | 1.10e-34 | 140 |
Msa0697830 | MtrunA17_Chr5g0429581 | 26.837 | 626 | 353 | 26 | 54 | 612 | 5 | 592 | 3.19e-34 | 139 |
Msa0697830 | MtrunA17_Chr5g0429541 | 25.884 | 622 | 350 | 24 | 54 | 612 | 5 | 578 | 1.43e-32 | 134 |
Msa0697830 | MtrunA17_Chr7g0253551 | 27.009 | 448 | 224 | 18 | 54 | 437 | 29 | 437 | 4.57e-28 | 118 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0697830 | AT5G64570.1 | 71.611 | 782 | 203 | 4 | 5 | 774 | 10 | 784 | 0.0 | 1190 |
Msa0697830 | AT5G09730.1 | 68.359 | 768 | 231 | 3 | 12 | 774 | 13 | 773 | 0.0 | 1123 |
Msa0697830 | AT5G64570.2 | 73.206 | 627 | 161 | 2 | 154 | 774 | 1 | 626 | 0.0 | 995 |
Msa0697830 | AT5G64570.3 | 74.068 | 590 | 140 | 3 | 5 | 588 | 10 | 592 | 0.0 | 907 |
Msa0697830 | AT3G19620.1 | 56.671 | 757 | 314 | 7 | 18 | 764 | 6 | 758 | 0.0 | 882 |
Msa0697830 | AT5G49360.1 | 57.702 | 766 | 302 | 11 | 19 | 772 | 15 | 770 | 0.0 | 864 |
Msa0697830 | AT1G02640.1 | 54.677 | 759 | 337 | 4 | 15 | 772 | 6 | 758 | 0.0 | 863 |
Msa0697830 | AT5G10560.1 | 47.650 | 766 | 364 | 9 | 39 | 772 | 30 | 790 | 0.0 | 738 |
Msa0697830 | AT1G78060.1 | 47.872 | 752 | 366 | 11 | 40 | 774 | 25 | 767 | 0.0 | 732 |
Msa0697830 | AT5G09700.1 | 66.598 | 482 | 155 | 2 | 299 | 774 | 45 | 526 | 0.0 | 690 |
Msa0697830 | AT3G47050.1 | 26.777 | 605 | 364 | 22 | 51 | 603 | 7 | 584 | 2.48e-39 | 155 |
Msa0697830 | AT3G47000.1 | 26.849 | 622 | 356 | 23 | 54 | 612 | 10 | 595 | 1.62e-38 | 152 |
Msa0697830 | AT3G47010.1 | 26.183 | 634 | 353 | 25 | 50 | 612 | 7 | 596 | 9.66e-37 | 147 |
Msa0697830 | AT3G47040.4 | 25.038 | 655 | 372 | 24 | 54 | 643 | 10 | 610 | 1.09e-36 | 147 |
Msa0697830 | AT3G47010.2 | 25.884 | 622 | 369 | 23 | 50 | 612 | 7 | 595 | 4.08e-36 | 145 |
Msa0697830 | AT5G04885.3 | 27.116 | 638 | 340 | 29 | 54 | 616 | 30 | 617 | 1.35e-35 | 144 |
Msa0697830 | AT5G04885.1 | 27.116 | 638 | 340 | 29 | 54 | 616 | 30 | 617 | 1.35e-35 | 144 |
Msa0697830 | AT5G04885.2 | 27.116 | 638 | 340 | 29 | 54 | 616 | 47 | 634 | 1.40e-35 | 144 |
Msa0697830 | AT3G62710.1 | 25.877 | 684 | 365 | 27 | 17 | 612 | 11 | 640 | 6.58e-35 | 142 |
Msa0697830 | AT3G47040.1 | 24.478 | 670 | 382 | 25 | 54 | 643 | 10 | 635 | 5.76e-34 | 139 |
Msa0697830 | AT5G20940.1 | 26.887 | 636 | 361 | 27 | 41 | 612 | 18 | 613 | 3.48e-33 | 136 |
Msa0697830 | AT3G47000.3 | 29.372 | 446 | 223 | 18 | 54 | 437 | 10 | 425 | 7.43e-32 | 130 |
Msa0697830 | AT5G20950.3 | 26.340 | 653 | 375 | 30 | 38 | 625 | 90 | 701 | 1.31e-31 | 132 |
Msa0697830 | AT5G20950.2 | 26.374 | 637 | 365 | 29 | 54 | 625 | 26 | 623 | 2.14e-31 | 130 |
Msa0697830 | AT5G20950.1 | 26.374 | 637 | 365 | 29 | 54 | 625 | 26 | 623 | 2.14e-31 | 130 |
Msa0697830 | AT3G47040.3 | 27.009 | 448 | 231 | 18 | 54 | 437 | 10 | 425 | 3.76e-30 | 125 |
Msa0697830 | AT3G47010.4 | 26.696 | 457 | 253 | 17 | 50 | 449 | 7 | 438 | 6.64e-28 | 118 |
Msa0697830 | AT3G47040.2 | 23.348 | 681 | 384 | 26 | 54 | 643 | 10 | 643 | 3.58e-25 | 111 |
Msa0697830 | AT3G47050.2 | 28.383 | 303 | 162 | 10 | 51 | 310 | 7 | 297 | 3.13e-23 | 103 |
Msa0697830 | AT3G47010.3 | 26.150 | 413 | 266 | 15 | 215 | 612 | 29 | 417 | 4.46e-23 | 103 |
Find 202 sgRNAs with CRISPR-Local
Find 293 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTTTAAATCATCACGCTTAA+AGG | 0.103984 | 4_4:-67840598 | None:intergenic |
TCAGACCACCATTCATATTT+TGG | 0.140699 | 4_4:-67837189 | None:intergenic |
CACCAAACATTAACATATTT+AGG | 0.157012 | 4_4:+67837481 | Msa0697830:CDS |
CGTGGCAAATGGAAACTAAA+TGG | 0.204423 | 4_4:+67837938 | Msa0697830:CDS |
TCACTTCTAAAACTTATTTC+TGG | 0.205705 | 4_4:-67840707 | None:intergenic |
CTCAACTTTCGAGCATAAAT+TGG | 0.211723 | 4_4:+67840207 | Msa0697830:CDS |
ATTAAATCATTGGCAGTTAT+TGG | 0.219557 | 4_4:+67838975 | Msa0697830:CDS |
GCTGACCCTGATCTTCTTAA+AGG | 0.226486 | 4_4:+67837908 | Msa0697830:CDS |
CTATTATATGTAGTTGCTTT+TGG | 0.238316 | 4_4:-67836726 | None:intergenic |
TGTTCCTACAATCAAGTAAA+TGG | 0.245995 | 4_4:+67837872 | Msa0697830:CDS |
GCTGAAGTGCAGACATCTTT+TGG | 0.254948 | 4_4:-67838864 | None:intergenic |
TCTTGACCTCTTCCCCATCT+TGG | 0.278328 | 4_4:-67837507 | None:intergenic |
TGCAGCTTCCTCAGGGGTCT+TGG | 0.289885 | 4_4:-67838481 | None:intergenic |
GCCATAGCTGATGTCATCTT+TGG | 0.300033 | 4_4:+67839532 | Msa0697830:CDS |
TGCCAATGATTTAATAGCTT+TGG | 0.304831 | 4_4:-67838967 | None:intergenic |
CATGCCTCCTCCAGACATTA+TGG | 0.305665 | 4_4:-67839431 | None:intergenic |
GACTTGGCTGCAGCTTCCTC+AGG | 0.311461 | 4_4:-67838489 | None:intergenic |
ATTCGCCAATGCTGGATTCT+TGG | 0.315695 | 4_4:-67837040 | None:intergenic |
GGGGAAACTGTCTTCTCATT+TGG | 0.319056 | 4_4:+67840169 | Msa0697830:CDS |
TCAATCACACAGCTCTTAAA+AGG | 0.325703 | 4_4:-67837827 | None:intergenic |
ATTGTAGACGGCATTGTTAA+TGG | 0.328849 | 4_4:-67838769 | None:intergenic |
CAGGGTTAACATTCTTCTTC+CGG | 0.333067 | 4_4:+67839348 | Msa0697830:CDS |
ACCAAACATTAACATATTTA+GGG | 0.344637 | 4_4:+67837482 | Msa0697830:CDS |
TGCCAAAGCTATTAAATCAT+TGG | 0.355308 | 4_4:+67838965 | Msa0697830:CDS |
AATCCAGCATTGGCGAATTA+CGG | 0.359386 | 4_4:+67837045 | Msa0697830:CDS |
TCAAATTCTCAAGGTCATAA+TGG | 0.369386 | 4_4:+67836891 | Msa0697830:exon |
ATCCAGCATTGGCGAATTAC+GGG | 0.371963 | 4_4:+67837046 | Msa0697830:CDS |
TTTAAGAGCTGTGTGATTGA+TGG | 0.379593 | 4_4:+67837830 | Msa0697830:CDS |
GAGAATAGGCATAGGAAAAC+TGG | 0.380578 | 4_4:-67837277 | None:intergenic |
AGTAGCCCGTGATGGGTGTT+AGG | 0.382481 | 4_4:-67836767 | None:intergenic |
GCTGTCAAGCAAGGGCTTAT+AGG | 0.388682 | 4_4:+67838738 | Msa0697830:CDS |
TTAATAGCTTTGGCATTAAG+AGG | 0.389345 | 4_4:-67838957 | None:intergenic |
ATGCGTCTAGGTTTCTTTGA+TGG | 0.391137 | 4_4:+67838807 | Msa0697830:CDS |
GTCCCAATGCCAATGCTACT+AGG | 0.392586 | 4_4:+67838997 | Msa0697830:CDS |
GATCCTAGCAAGCAACCTTA+TGG | 0.393133 | 4_4:+67838831 | Msa0697830:CDS |
CCATAGCTGATGTCATCTTT+GGG | 0.402935 | 4_4:+67839533 | Msa0697830:CDS |
TTTCCATAAGGTTGCTTGCT+AGG | 0.410934 | 4_4:-67838834 | None:intergenic |
AGCAGCAACCTTAAGCTTGT+TGG | 0.411669 | 4_4:-67837613 | None:intergenic |
CAGGGGTCTTGGTGTAATGT+TGG | 0.414800 | 4_4:-67838470 | None:intergenic |
AATTATATATGTCATATTAG+AGG | 0.426795 | 4_4:-67836820 | None:intergenic |
GGCATCATCTAGTGCAGCAT+TGG | 0.428477 | 4_4:-67839248 | None:intergenic |
AGGGTTAACATTCTTCTTCC+GGG | 0.431011 | 4_4:+67839349 | Msa0697830:CDS |
TGACAGCACCTTCTGTATAT+CGG | 0.431143 | 4_4:-67838722 | None:intergenic |
ATAACACCTTTAAGAAGATC+AGG | 0.432414 | 4_4:-67837914 | None:intergenic |
GTGATTCTTGCCATAATGTC+TGG | 0.433130 | 4_4:+67839421 | Msa0697830:CDS |
ACCTTCGTAGTTTCCAATCA+TGG | 0.434772 | 4_4:-67839021 | None:intergenic |
CTTGTTAGCAAATATGCAGC+AGG | 0.437373 | 4_4:+67837552 | Msa0697830:CDS |
CTCATGTTCATATTGGTCAT+TGG | 0.438430 | 4_4:-67840097 | None:intergenic |
GACATTATGGCAAGAATCAC+AGG | 0.439622 | 4_4:-67839418 | None:intergenic |
ATTGGTTAAAGCACCACAAT+TGG | 0.441371 | 4_4:+67840225 | Msa0697830:CDS |
ATACATTACCACAGCATTGA+AGG | 0.443167 | 4_4:-67837694 | None:intergenic |
TGCACCTCAGAAACACTTGT+TGG | 0.443221 | 4_4:+67840426 | Msa0697830:CDS |
TTGTGGGAACTAAGGCTGTT+AGG | 0.443745 | 4_4:-67839192 | None:intergenic |
AGGCGAAAACTGCAGATGTT+TGG | 0.443791 | 4_4:-67837008 | None:intergenic |
AACCCGTAATTCGCCAATGC+TGG | 0.444375 | 4_4:-67837048 | None:intergenic |
ATGAGTGATGAGTAGAAAAC+TGG | 0.444638 | 4_4:-67840798 | None:intergenic |
CTTCATGGAGTCTCTTACAT+TGG | 0.446926 | 4_4:+67837216 | Msa0697830:CDS |
GCATTGGTGCATTGAACATC+AGG | 0.448023 | 4_4:-67839232 | None:intergenic |
GTTGGTTATCCTGGAGAAGC+TGG | 0.449136 | 4_4:+67839502 | Msa0697830:CDS |
CATATTTGCTAACAAGTAAA+GGG | 0.449152 | 4_4:-67837545 | None:intergenic |
GGTTGGCTGGTTTAACATAT+TGG | 0.452673 | 4_4:+67837457 | Msa0697830:CDS |
GCATATTTGCTAACAAGTAA+AGG | 0.454563 | 4_4:-67837546 | None:intergenic |
GTTCCCACAAGCTTTGCTGC+TGG | 0.455205 | 4_4:+67839205 | Msa0697830:CDS |
ATGCACAACGTCGGGTTGGC+TGG | 0.455328 | 4_4:+67837444 | Msa0697830:CDS |
TCCCTAAATATGTTAATGTT+TGG | 0.457701 | 4_4:-67837483 | None:intergenic |
CAGCTTCACGAGCTAGCTCC+TGG | 0.458313 | 4_4:-67838890 | None:intergenic |
CAAGAGCAATGCACAACGTC+GGG | 0.459504 | 4_4:+67837436 | Msa0697830:CDS |
ACATATTTAGGGATCCAAGA+TGG | 0.461963 | 4_4:+67837493 | Msa0697830:CDS |
AAAGAAGCTGCAATGAGAAT+AGG | 0.464509 | 4_4:-67837291 | None:intergenic |
ATCAGGCCTCATGTTCATAT+TGG | 0.465309 | 4_4:-67840104 | None:intergenic |
TCCCTTTGTTCTTGATCCTG+AGG | 0.465656 | 4_4:-67840348 | None:intergenic |
CGGTGCAAATCTTGCAATAG+AGG | 0.465750 | 4_4:+67839312 | Msa0697830:CDS |
GGGTAGCCTGTAGCAGGATC+AGG | 0.466135 | 4_4:-67840121 | None:intergenic |
AATGCTACTAGGGCCATGAT+TGG | 0.472467 | 4_4:+67839008 | Msa0697830:CDS |
TGTAAGTCACTCGATGTTGT+TGG | 0.472630 | 4_4:+67840292 | Msa0697830:CDS |
TGGAGACTCCAACAAGCTTA+AGG | 0.472702 | 4_4:+67837605 | Msa0697830:CDS |
CATATTTAGGGATCCAAGAT+GGG | 0.473111 | 4_4:+67837494 | Msa0697830:CDS |
TGAGGTGCATTGTGCACTGC+AGG | 0.474909 | 4_4:-67840412 | None:intergenic |
GCCCTAGTAGCATTGGCATT+GGG | 0.475560 | 4_4:-67838999 | None:intergenic |
GCTGTTGATGTAAGCAGACT+TGG | 0.476218 | 4_4:+67837162 | Msa0697830:CDS |
GAGAAACCTTACCTTTCCTA+TGG | 0.476556 | 4_4:-67837334 | None:intergenic |
TGGTGGTCTGAAGCACTTCA+TGG | 0.476761 | 4_4:+67837201 | Msa0697830:CDS |
AGCAAAGCTTGTGGGAACTA+AGG | 0.478113 | 4_4:-67839200 | None:intergenic |
ATGTAGTTTACCTGCTAGAA+TGG | 0.479155 | 4_4:-67838511 | None:intergenic |
ACCTCAGGATCAAGAACAAA+GGG | 0.481557 | 4_4:+67840347 | Msa0697830:CDS |
GGAGTCTCTTACATTGGTCC+AGG | 0.482956 | 4_4:+67837222 | Msa0697830:CDS |
ACTAACTGTTGCTGCTGTCC+CGG | 0.486620 | 4_4:-67839367 | None:intergenic |
TTTGGACCAAGGTTTCCATA+AGG | 0.489120 | 4_4:-67838846 | None:intergenic |
AAGGTGTTATCCGTGGCAAA+TGG | 0.492172 | 4_4:+67837927 | Msa0697830:CDS |
CTTTCCTATGGTTTGAAACA+AGG | 0.492728 | 4_4:-67837322 | None:intergenic |
CTACCAGGGTAGCCTGTAGC+AGG | 0.493617 | 4_4:-67840127 | None:intergenic |
TTGAGTGTGGTTGATGAACT+TGG | 0.494459 | 4_4:+67840520 | Msa0697830:CDS |
GGCAAGAATCACAGGCCCCT+TGG | 0.498411 | 4_4:-67839410 | None:intergenic |
GGTCTACAACAAACTGATGA+TGG | 0.502433 | 4_4:+67837585 | Msa0697830:CDS |
AACAGGAAAATCAGAAGCAC+TGG | 0.505611 | 4_4:+67840468 | Msa0697830:CDS |
GGCCCTAGTAGCATTGGCAT+TGG | 0.508942 | 4_4:-67839000 | None:intergenic |
TAGCCTTTGATATTCACCTC+AGG | 0.509602 | 4_4:+67840332 | Msa0697830:CDS |
TGTCTGCACTTCAGCAAACC+AGG | 0.511708 | 4_4:+67838872 | Msa0697830:CDS |
GCTTCCTTGTTTCAAACCAT+AGG | 0.512430 | 4_4:+67837318 | Msa0697830:CDS |
TTTACCTGCTAGAATGGACT+TGG | 0.512571 | 4_4:-67838505 | None:intergenic |
GTGGCAAATGGAAACTAAAT+GGG | 0.513107 | 4_4:+67837939 | Msa0697830:CDS |
GCTCGTGAAGCTGCAAGGCA+AGG | 0.513237 | 4_4:+67838900 | Msa0697830:CDS |
ACTGTCTTCTCATTTGGAGA+TGG | 0.513776 | 4_4:+67840175 | Msa0697830:CDS |
GCAGCTCCACCAGCTTCTCC+AGG | 0.518655 | 4_4:-67839511 | None:intergenic |
CTTGTTTCAAACCATAGGAA+AGG | 0.519277 | 4_4:+67837323 | Msa0697830:CDS |
ATAGGAAAACTGGTTGCTCC+AGG | 0.520085 | 4_4:-67837267 | None:intergenic |
ACTTGGCTGCAGCTTCCTCA+GGG | 0.522958 | 4_4:-67838488 | None:intergenic |
TAAAATCTGTATGTTCTACC+AGG | 0.524873 | 4_4:-67840142 | None:intergenic |
CTCGTGAAGCTGCAAGGCAA+GGG | 0.532764 | 4_4:+67838901 | Msa0697830:CDS |
AATCATGGCCCTAGTAGCAT+TGG | 0.533162 | 4_4:-67839006 | None:intergenic |
GAGTGCACTTAGGTTGTGAT+AGG | 0.533936 | 4_4:-67840835 | None:intergenic |
TTGGGATTCCAAAATATGAA+TGG | 0.535603 | 4_4:+67837181 | Msa0697830:CDS |
TGGATTCTTGGCAACATCGC+AGG | 0.541711 | 4_4:-67837028 | None:intergenic |
ATGAGGCCTGATCCTGCTAC+AGG | 0.541829 | 4_4:+67840115 | Msa0697830:CDS |
CAGCCAGCAGCAAAGCTTGT+GGG | 0.542585 | 4_4:-67839208 | None:intergenic |
CAGAGGAAAACAGAGACGTT+AGG | 0.545414 | 4_4:-67836934 | None:intergenic |
TGTCGCAAAATTATTGTAGA+CGG | 0.546588 | 4_4:-67838781 | None:intergenic |
CAAACATGATCATCAGCTAA+AGG | 0.549569 | 4_4:-67840256 | None:intergenic |
TGAAGTTGCAAATGCAGCCA+AGG | 0.549573 | 4_4:+67839393 | Msa0697830:CDS |
TAGAGGCAGAGAGTCATGAC+AGG | 0.550424 | 4_4:+67839329 | Msa0697830:CDS |
ACAAGTAAAGGGTCTTCTCC+TGG | 0.552386 | 4_4:-67837534 | None:intergenic |
AGCTAGCTCGTGAAGCTGCA+AGG | 0.553456 | 4_4:+67838895 | Msa0697830:CDS |
TCCCAATGCCAATGCTACTA+GGG | 0.556982 | 4_4:+67838998 | Msa0697830:CDS |
GTGTTAGGAGTGAAAGAAAG+AGG | 0.558538 | 4_4:-67836752 | None:intergenic |
ACAGAAGGTGCTGTCAAGCA+AGG | 0.561917 | 4_4:+67838729 | Msa0697830:CDS |
GCAGCCAAGTCCATTCTAGC+AGG | 0.563938 | 4_4:+67838501 | Msa0697830:CDS |
TTCACTCCTAACACCCATCA+CGG | 0.567877 | 4_4:+67836761 | Msa0697830:five_prime_UTR |
GATCCTGAGGTGAATATCAA+AGG | 0.569135 | 4_4:-67840335 | None:intergenic |
AGGGATCCAAGATGGGGAAG+AGG | 0.570000 | 4_4:+67837501 | Msa0697830:CDS |
AAGGTTGACATTGCAAGAGA+AGG | 0.572395 | 4_4:+67837119 | Msa0697830:CDS |
AGCAATGCACAACGTCGGGT+TGG | 0.573033 | 4_4:+67837440 | Msa0697830:CDS |
AAGCAACCTTATGGAAACCT+TGG | 0.575163 | 4_4:+67838840 | Msa0697830:CDS |
TTGACATTGCAAGAGAAGGT+TGG | 0.577392 | 4_4:+67837123 | Msa0697830:CDS |
CACAGCTCTTAAAAGGTGGT+TGG | 0.578720 | 4_4:-67837820 | None:intergenic |
CAGAAGGTGCTGTCAAGCAA+GGG | 0.579821 | 4_4:+67838730 | Msa0697830:CDS |
GGAAAACATATGCTTCATGT+AGG | 0.580882 | 4_4:+67840562 | Msa0697830:CDS |
TTTGCGACATTAATGCGTCT+AGG | 0.581567 | 4_4:+67838795 | Msa0697830:CDS |
CAGCATATGATGTTGATGAC+TGG | 0.584387 | 4_4:+67837652 | Msa0697830:CDS |
AGATAGTGAACAACATGGGA+AGG | 0.585387 | 4_4:-67836702 | None:intergenic |
CACCTCAGGATCAAGAACAA+AGG | 0.587124 | 4_4:+67840346 | Msa0697830:CDS |
CATTTAGTTTCCATTTGCCA+CGG | 0.587656 | 4_4:-67837937 | None:intergenic |
GGTTATCCTGGAGAAGCTGG+TGG | 0.587955 | 4_4:+67839505 | Msa0697830:CDS |
TTTCTTGGCCGATATACAGA+AGG | 0.588531 | 4_4:+67838714 | Msa0697830:CDS |
CCCAAAGATGACATCAGCTA+TGG | 0.590854 | 4_4:-67839533 | None:intergenic |
AGAAATTGAGTGTGGATGCA+AGG | 0.597818 | 4_4:+67837079 | Msa0697830:CDS |
CTGTTGATGTAAGCAGACTT+GGG | 0.597835 | 4_4:+67837163 | Msa0697830:CDS |
TGTTGCCAAGAATCCAGCAT+TGG | 0.599346 | 4_4:+67837035 | Msa0697830:CDS |
TCACTCCTAACACCCATCAC+GGG | 0.599970 | 4_4:+67836762 | Msa0697830:five_prime_UTR |
TATGCAGCAGGGTACGTGAA+AGG | 0.600652 | 4_4:+67837564 | Msa0697830:CDS |
GGGTGAAAGACCTTGTGAGA+AGG | 0.601719 | 4_4:+67837100 | Msa0697830:CDS |
ATTTGCACCGACTACAATCA+CGG | 0.602874 | 4_4:-67839299 | None:intergenic |
ACTTTGTCTACATATGATTG+TGG | 0.603286 | 4_4:-67840073 | None:intergenic |
CATCAACAGCAGAATTCACA+AGG | 0.603921 | 4_4:-67837149 | None:intergenic |
GGTTGCTCCAGGTATAACAT+TGG | 0.604127 | 4_4:-67837256 | None:intergenic |
GATCCTGCTACAGGCTACCC+TGG | 0.605372 | 4_4:+67840124 | Msa0697830:CDS |
CTTCTTAAAGGTGTTATCCG+TGG | 0.607358 | 4_4:+67837920 | Msa0697830:CDS |
ACAGCCAGCAGCAAAGCTTG+TGG | 0.607399 | 4_4:-67839209 | None:intergenic |
GAAGTTGCAAATGCAGCCAA+GGG | 0.607986 | 4_4:+67839394 | Msa0697830:CDS |
AAAGCCAACAAGTGTTTCTG+AGG | 0.608076 | 4_4:-67840430 | None:intergenic |
GCGTTACACCTTCAATGCTG+TGG | 0.608802 | 4_4:+67837686 | Msa0697830:CDS |
CATAATGTCTGGAGGAGGCA+TGG | 0.611672 | 4_4:+67839432 | Msa0697830:CDS |
CTTGGCTGCAGCTTCCTCAG+GGG | 0.612324 | 4_4:-67838487 | None:intergenic |
GAGTCTCTTACATTGGTCCA+GGG | 0.612774 | 4_4:+67837223 | Msa0697830:CDS |
CTTGCCATAATGTCTGGAGG+AGG | 0.615660 | 4_4:+67839427 | Msa0697830:CDS |
AAAGGTGATGTATATTTGCA+TGG | 0.623811 | 4_4:-67839163 | None:intergenic |
GAAATTGAGTGTGGATGCAA+GGG | 0.626342 | 4_4:+67837080 | Msa0697830:CDS |
GCAAGAGCAATGCACAACGT+CGG | 0.629064 | 4_4:+67837435 | Msa0697830:CDS |
GATGCAACCGTGATTGTAGT+CGG | 0.629741 | 4_4:+67839292 | Msa0697830:CDS |
GGCAACAGAAAAGTTGCCCT+AGG | 0.635515 | 4_4:+67840541 | Msa0697830:CDS |
TGATTGTGGATACCATGTCA+TGG | 0.635666 | 4_4:-67840059 | None:intergenic |
GCTGCAATGAGAATAGGCAT+AGG | 0.636909 | 4_4:-67837285 | None:intergenic |
AAATATACATCACCTTTGCA+AGG | 0.638543 | 4_4:+67839169 | Msa0697830:CDS |
ATCACACAGCTCTTAAAAGG+TGG | 0.639170 | 4_4:-67837824 | None:intergenic |
AAAGGAACAGACACCAATTG+TGG | 0.639642 | 4_4:-67840238 | None:intergenic |
TGGAAGATAGTGAACAACAT+GGG | 0.639798 | 4_4:-67836706 | None:intergenic |
ACAGGATTGGATTTGAACTG+TGG | 0.643755 | 4_4:+67838687 | Msa0697830:intron |
GATTGTGGATACCATGTCAT+GGG | 0.644060 | 4_4:-67840058 | None:intergenic |
CAATGACCAATATGAACATG+AGG | 0.645368 | 4_4:+67840098 | Msa0697830:CDS |
AAGGCTGTTAGGCCTTGCAA+AGG | 0.647052 | 4_4:-67839181 | None:intergenic |
TAACACCTTTAAGAAGATCA+GGG | 0.647148 | 4_4:-67837913 | None:intergenic |
GGATTCCAAAATATGAATGG+TGG | 0.648983 | 4_4:+67837184 | Msa0697830:CDS |
TTGTTAGCAAATATGCAGCA+GGG | 0.654785 | 4_4:+67837553 | Msa0697830:CDS |
GCAATGTCAACCTTCTCACA+AGG | 0.660006 | 4_4:-67837110 | None:intergenic |
CAAACAGAACAAAGAAACAG+AGG | 0.661188 | 4_4:-67836951 | None:intergenic |
ACCACCACTCAGCAAAAGTG+TGG | 0.664666 | 4_4:-67836974 | None:intergenic |
AGATCAGGGTCAGCACAAGT+CGG | 0.668758 | 4_4:-67837899 | None:intergenic |
TTGGAAGATAGTGAACAACA+TGG | 0.669298 | 4_4:-67836707 | None:intergenic |
AAAATCTGTATGTTCTACCA+GGG | 0.669451 | 4_4:-67840141 | None:intergenic |
GGAAGAGGTCAAGAAACACC+AGG | 0.670289 | 4_4:+67837516 | Msa0697830:CDS |
ATATTTAGGGATCCAAGATG+GGG | 0.672629 | 4_4:+67837495 | Msa0697830:CDS |
GTGGAAGGCTACCCATGACA+TGG | 0.674570 | 4_4:+67840047 | Msa0697830:CDS |
TATGATGTTGATGACTGGAA+AGG | 0.681867 | 4_4:+67837657 | Msa0697830:CDS |
TGTTTGTAAAGATTTGAGTG+TGG | 0.683829 | 4_4:+67840507 | Msa0697830:CDS |
GGTGCATTGTGCACTGCAGG+AGG | 0.684891 | 4_4:-67840409 | None:intergenic |
CTGCAACAAGAAATTGAGTG+TGG | 0.685493 | 4_4:+67837071 | Msa0697830:CDS |
GCCATGATTGGAAACTACGA+AGG | 0.687224 | 4_4:+67839020 | Msa0697830:CDS |
AGAGGCAGAGAGTCATGACA+GGG | 0.690610 | 4_4:+67839330 | Msa0697830:CDS |
AATCACGGTTGCATCTGCTG+AGG | 0.690719 | 4_4:-67839284 | None:intergenic |
ATTCTTGCCATAATGTCTGG+AGG | 0.713271 | 4_4:+67839424 | Msa0697830:CDS |
AAGTTGCAAATGCAGCCAAG+GGG | 0.732574 | 4_4:+67839395 | Msa0697830:CDS |
AACATGGGAAGGAATCTCTG+TGG | 0.741639 | 4_4:-67836691 | None:intergenic |
ACATTACACCAAGACCCCTG+AGG | 0.763610 | 4_4:+67838473 | Msa0697830:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AAATAACAAATATTGTTTTA+TGG | + | chr4_4:67837384-67837403 | Msa0697830:intron | 10.0% |
!!! | ATATTTTGTTTATATTTGAA+TGG | - | chr4_4:67838007-67838026 | None:intergenic | 10.0% |
!! | ATTATAAAAAAATTGAAAAC+AGG | - | chr4_4:67838369-67838388 | None:intergenic | 10.0% |
!! | ATTTAACCTATAAAAATTAT+AGG | - | chr4_4:67839063-67839082 | None:intergenic | 10.0% |
!! | AATTATATATGTCATATTAG+AGG | - | chr4_4:67836823-67836842 | None:intergenic | 15.0% |
!! | AAAACACAAAAATAAGTAAA+AGG | - | chr4_4:67836872-67836891 | None:intergenic | 15.0% |
!!! | CATATAAAAGATAATTGTTT+TGG | - | chr4_4:67838173-67838192 | None:intergenic | 15.0% |
!! | AACATATTATTGAGAATTAT+TGG | - | chr4_4:67839918-67839937 | None:intergenic | 15.0% |
!!! | ACAACATAATTTTTTAATTC+AGG | + | chr4_4:67840025-67840044 | Msa0697830:intron | 15.0% |
!!! | AATTTTTAAGGAAATCAATA+AGG | - | chr4_4:67840653-67840672 | None:intergenic | 15.0% |
!! | TTGATTTCCTTAAAAATTTA+AGG | + | chr4_4:67840655-67840674 | Msa0697830:three_prime_UTR | 15.0% |
!! | TGATTTCCTTAAAAATTTAA+GGG | + | chr4_4:67840656-67840675 | Msa0697830:three_prime_UTR | 15.0% |
!! | TAAAAAAAATCAATATTGAC+TGG | + | chr4_4:67840774-67840793 | Msa0697830:three_prime_UTR | 15.0% |
!! | ACCAAACATTAACATATTTA+GGG | + | chr4_4:67837482-67837501 | Msa0697830:CDS | 20.0% |
!!! | TAATTGTTGTTGATTTTGTT+AGG | + | chr4_4:67837769-67837788 | Msa0697830:intron | 20.0% |
!!! | AATTGTTTTGGATGTAAATT+GGG | - | chr4_4:67838161-67838180 | None:intergenic | 20.0% |
!!! | TAATTGTTTTGGATGTAAAT+TGG | - | chr4_4:67838162-67838181 | None:intergenic | 20.0% |
!!! | TGTACAAATTTTGATTTTAC+AGG | + | chr4_4:67838669-67838688 | Msa0697830:intron | 20.0% |
!!! | AAATTTTGATTTTACAGGAT+TGG | + | chr4_4:67838674-67838693 | Msa0697830:intron | 20.0% |
!!! | TTTATCATTAGTTTTAGCAA+AGG | - | chr4_4:67839464-67839483 | None:intergenic | 20.0% |
!!! | AACAACTTTGATTTTAAACT+CGG | + | chr4_4:67839691-67839710 | Msa0697830:intron | 20.0% |
!!! | ACATAATTTTTTAATTCAGG+TGG | + | chr4_4:67840028-67840047 | Msa0697830:intron | 20.0% |
!!! | AGAACATACAGATTTTATAA+AGG | + | chr4_4:67840148-67840167 | Msa0697830:CDS | 20.0% |
!!! | GAACATACAGATTTTATAAA+GGG | + | chr4_4:67840149-67840168 | Msa0697830:CDS | 20.0% |
!!! | AACATACAGATTTTATAAAG+GGG | + | chr4_4:67840150-67840169 | Msa0697830:CDS | 20.0% |
!!! | TCTTTTATTTCAGCTTTTCA+CGG | + | chr4_4:67836659-67836678 | Msa0697830:five_prime_UTR | 25.0% |
!!! | CTATTATATGTAGTTGCTTT+TGG | - | chr4_4:67836729-67836748 | None:intergenic | 25.0% |
!! | TTTGTGTTTTCAAATTCTCA+AGG | + | chr4_4:67836882-67836901 | Msa0697830:five_prime_UTR | 25.0% |
! | TATCATATCATGCATGTTAA+TGG | + | chr4_4:67837358-67837377 | Msa0697830:intron | 25.0% |
! | CACCAAACATTAACATATTT+AGG | + | chr4_4:67837481-67837500 | Msa0697830:CDS | 25.0% |
! | TCCCTAAATATGTTAATGTT+TGG | - | chr4_4:67837486-67837505 | None:intergenic | 25.0% |
!! | CATATTTGCTAACAAGTAAA+GGG | - | chr4_4:67837548-67837567 | None:intergenic | 25.0% |
!! | TTTTCCATTTACTTGATTGT+AGG | - | chr4_4:67837879-67837898 | None:intergenic | 25.0% |
! | AAATTGAAAACAGGAAAGAA+TGG | - | chr4_4:67838360-67838379 | None:intergenic | 25.0% |
! | TTACACAATCACATATTCAT+AGG | + | chr4_4:67838543-67838562 | Msa0697830:intron | 25.0% |
!!! | AGCTTCTTTAGAATTATACA+AGG | + | chr4_4:67838623-67838642 | Msa0697830:intron | 25.0% |
! | ATTAAATCATTGGCAGTTAT+TGG | + | chr4_4:67838975-67838994 | Msa0697830:CDS | 25.0% |
! | CCTATAAAAATTATAGGAGA+GGG | - | chr4_4:67839057-67839076 | None:intergenic | 25.0% |
! | ACCTATAAAAATTATAGGAG+AGG | - | chr4_4:67839058-67839077 | None:intergenic | 25.0% |
!! | ATAAAATCACAAGCATTTTG+TGG | + | chr4_4:67839479-67839498 | Msa0697830:CDS | 25.0% |
!! | TAAAATCACAAGCATTTTGT+GGG | + | chr4_4:67839480-67839499 | Msa0697830:CDS | 25.0% |
! | GAATTCTCATTCCAATAATT+TGG | + | chr4_4:67839607-67839626 | Msa0697830:intron | 25.0% |
! | CAAAAGGAAATCCAAATTAT+TGG | - | chr4_4:67839621-67839640 | None:intergenic | 25.0% |
! | AGGATCTAATTATATGAGTA+TGG | + | chr4_4:67839997-67840016 | Msa0697830:intron | 25.0% |
!!! | AATTTTTTAATTCAGGTGGA+AGG | + | chr4_4:67840032-67840051 | Msa0697830:intron | 25.0% |
!! | ATGGTTCCCTTAAATTTTTA+AGG | - | chr4_4:67840665-67840684 | None:intergenic | 25.0% |
!!! | CACTTTTTTAATGCAAGTTA+TGG | - | chr4_4:67840684-67840703 | None:intergenic | 25.0% |
!!! | TCACTTCTAAAACTTATTTC+TGG | - | chr4_4:67840710-67840729 | None:intergenic | 25.0% |
TCAAATTCTCAAGGTCATAA+TGG | + | chr4_4:67836891-67836910 | Msa0697830:exon | 30.0% | |
TTGGGATTCCAAAATATGAA+TGG | + | chr4_4:67837181-67837200 | Msa0697830:CDS | 30.0% | |
!! | GTTTTATGGCTATTTTGTGT+AGG | + | chr4_4:67837398-67837417 | Msa0697830:intron | 30.0% |
! | GCATATTTGCTAACAAGTAA+AGG | - | chr4_4:67837549-67837568 | None:intergenic | 30.0% |
!! | AGCTAGTTAATGTGTTTTTG+AGG | + | chr4_4:67837739-67837758 | Msa0697830:intron | 30.0% |
TGTTCCTACAATCAAGTAAA+TGG | + | chr4_4:67837872-67837891 | Msa0697830:CDS | 30.0% | |
! | TAACACCTTTAAGAAGATCA+GGG | - | chr4_4:67837916-67837935 | None:intergenic | 30.0% |
! | ATAACACCTTTAAGAAGATC+AGG | - | chr4_4:67837917-67837936 | None:intergenic | 30.0% |
AGTGAGATACAAGAATTAAG+AGG | - | chr4_4:67837984-67838003 | None:intergenic | 30.0% | |
TTGTTCACTGTAATTCTATC+CGG | + | chr4_4:67838097-67838116 | Msa0697830:intron | 30.0% | |
CAAAATAAACTCATGTTTGC+TGG | - | chr4_4:67838301-67838320 | None:intergenic | 30.0% | |
TGTCGCAAAATTATTGTAGA+CGG | - | chr4_4:67838784-67838803 | None:intergenic | 30.0% | |
!! | TTAATAGCTTTGGCATTAAG+AGG | - | chr4_4:67838960-67838979 | None:intergenic | 30.0% |
TGCCAAAGCTATTAAATCAT+TGG | + | chr4_4:67838965-67838984 | Msa0697830:CDS | 30.0% | |
TGCCAATGATTTAATAGCTT+TGG | - | chr4_4:67838970-67838989 | None:intergenic | 30.0% | |
! | CCCTCTCCTATAATTTTTAT+AGG | + | chr4_4:67839054-67839073 | Msa0697830:intron | 30.0% |
!! | AACAAGTTCTAAAACTTTGC+AGG | + | chr4_4:67839136-67839155 | Msa0697830:intron | 30.0% |
AAAGGTGATGTATATTTGCA+TGG | - | chr4_4:67839166-67839185 | None:intergenic | 30.0% | |
AAATATACATCACCTTTGCA+AGG | + | chr4_4:67839169-67839188 | Msa0697830:CDS | 30.0% | |
AATGAGAATTCTGTGATATG+AGG | - | chr4_4:67839598-67839617 | None:intergenic | 30.0% | |
TGCTTGAAAATTGTGACAAA+AGG | - | chr4_4:67839637-67839656 | None:intergenic | 30.0% | |
GTCGTTCAATCTTGATTTAA+TGG | + | chr4_4:67839747-67839766 | Msa0697830:intron | 30.0% | |
!! | ATTTCAAGTTTGTAGCAACT+TGG | - | chr4_4:67839775-67839794 | None:intergenic | 30.0% |
CATGAATGAAACCACTATTT+AGG | - | chr4_4:67839874-67839893 | None:intergenic | 30.0% | |
CATATAATTAGATCCTAGTG+AGG | - | chr4_4:67839993-67840012 | None:intergenic | 30.0% | |
ACTTTGTCTACATATGATTG+TGG | - | chr4_4:67840076-67840095 | None:intergenic | 30.0% | |
AAAATCTGTATGTTCTACCA+GGG | - | chr4_4:67840144-67840163 | None:intergenic | 30.0% | |
TAAAATCTGTATGTTCTACC+AGG | - | chr4_4:67840145-67840164 | None:intergenic | 30.0% | |
!! | GTGACTTACATTTTGAAGAA+CGG | - | chr4_4:67840282-67840301 | None:intergenic | 30.0% |
TAGAGAACAAAAACACTGTT+TGG | - | chr4_4:67840387-67840406 | None:intergenic | 30.0% | |
!! | TTCGAAAAAGTACTCTTAAC+AGG | + | chr4_4:67840451-67840470 | Msa0697830:CDS | 30.0% |
TGTTTGTAAAGATTTGAGTG+TGG | + | chr4_4:67840507-67840526 | Msa0697830:CDS | 30.0% | |
! | ATGAAGCATATGTTTTCCTA+GGG | - | chr4_4:67840560-67840579 | None:intergenic | 30.0% |
CTTTAAATCATCACGCTTAA+AGG | - | chr4_4:67840601-67840620 | None:intergenic | 30.0% | |
TGGAAGATAGTGAACAACAT+GGG | - | chr4_4:67836709-67836728 | None:intergenic | 35.0% | |
TTGGAAGATAGTGAACAACA+TGG | - | chr4_4:67836710-67836729 | None:intergenic | 35.0% | |
CAAACAGAACAAAGAAACAG+AGG | - | chr4_4:67836954-67836973 | None:intergenic | 35.0% | |
GGATTCCAAAATATGAATGG+TGG | + | chr4_4:67837184-67837203 | Msa0697830:CDS | 35.0% | |
! | TCAGACCACCATTCATATTT+TGG | - | chr4_4:67837192-67837211 | None:intergenic | 35.0% |
! | CGTTTTTCCAATGTTATACC+TGG | + | chr4_4:67837249-67837268 | Msa0697830:CDS | 35.0% |
AAAGAAGCTGCAATGAGAAT+AGG | - | chr4_4:67837294-67837313 | None:intergenic | 35.0% | |
! | CTTTCCTATGGTTTGAAACA+AGG | - | chr4_4:67837325-67837344 | None:intergenic | 35.0% |
CTTGTTTCAAACCATAGGAA+AGG | + | chr4_4:67837323-67837342 | Msa0697830:CDS | 35.0% | |
TTCAAACCATAGGAAAGGTA+AGG | + | chr4_4:67837328-67837347 | Msa0697830:intron | 35.0% | |
!! | TTATGGCTATTTTGTGTAGG+TGG | + | chr4_4:67837401-67837420 | Msa0697830:intron | 35.0% |
ACATATTTAGGGATCCAAGA+TGG | + | chr4_4:67837493-67837512 | Msa0697830:CDS | 35.0% | |
CATATTTAGGGATCCAAGAT+GGG | + | chr4_4:67837494-67837513 | Msa0697830:CDS | 35.0% | |
ATATTTAGGGATCCAAGATG+GGG | + | chr4_4:67837495-67837514 | Msa0697830:CDS | 35.0% | |
TTGTTAGCAAATATGCAGCA+GGG | + | chr4_4:67837553-67837572 | Msa0697830:CDS | 35.0% | |
!! | TATGATGTTGATGACTGGAA+AGG | + | chr4_4:67837657-67837676 | Msa0697830:CDS | 35.0% |
! | ATACATTACCACAGCATTGA+AGG | - | chr4_4:67837697-67837716 | None:intergenic | 35.0% |
TCAATCACACAGCTCTTAAA+AGG | - | chr4_4:67837830-67837849 | None:intergenic | 35.0% | |
TTTAAGAGCTGTGTGATTGA+TGG | + | chr4_4:67837830-67837849 | Msa0697830:CDS | 35.0% | |
! | CATTTAGTTTCCATTTGCCA+CGG | - | chr4_4:67837940-67837959 | None:intergenic | 35.0% |
GTGGCAAATGGAAACTAAAT+GGG | + | chr4_4:67837939-67837958 | Msa0697830:CDS | 35.0% | |
TGAAGACAAGCTATAGAATG+CGG | + | chr4_4:67838044-67838063 | Msa0697830:intron | 35.0% | |
TGTTCACTGTAATTCTATCC+GGG | + | chr4_4:67838098-67838117 | Msa0697830:intron | 35.0% | |
CAAAAACTAATTCCTCAACC+CGG | - | chr4_4:67838119-67838138 | None:intergenic | 35.0% | |
ATGTAGTTTACCTGCTAGAA+TGG | - | chr4_4:67838514-67838533 | None:intergenic | 35.0% | |
! | TTGAACTGTGGAAGTTTTCT+TGG | + | chr4_4:67838699-67838718 | Msa0697830:CDS | 35.0% |
ATTGTAGACGGCATTGTTAA+TGG | - | chr4_4:67838772-67838791 | None:intergenic | 35.0% | |
ATGCAGTAAGACGAAATTGT+TGG | + | chr4_4:67839664-67839683 | Msa0697830:intron | 35.0% | |
CATTCATGCATTTAGCAACT+TGG | - | chr4_4:67839827-67839846 | None:intergenic | 35.0% | |
AGAATTATTGGAACCTAGTG+GGG | - | chr4_4:67839906-67839925 | None:intergenic | 35.0% | |
GAGAATTATTGGAACCTAGT+GGG | - | chr4_4:67839907-67839926 | None:intergenic | 35.0% | |
TGAGAATTATTGGAACCTAG+TGG | - | chr4_4:67839908-67839927 | None:intergenic | 35.0% | |
CTCATGTTCATATTGGTCAT+TGG | - | chr4_4:67840100-67840119 | None:intergenic | 35.0% | |
CAATGACCAATATGAACATG+AGG | + | chr4_4:67840098-67840117 | Msa0697830:CDS | 35.0% | |
CTCAACTTTCGAGCATAAAT+TGG | + | chr4_4:67840207-67840226 | Msa0697830:CDS | 35.0% | |
! | ATTGGTTAAAGCACCACAAT+TGG | + | chr4_4:67840225-67840244 | Msa0697830:CDS | 35.0% |
CAAACATGATCATCAGCTAA+AGG | - | chr4_4:67840259-67840278 | None:intergenic | 35.0% | |
! | CATGAAGCATATGTTTTCCT+AGG | - | chr4_4:67840561-67840580 | None:intergenic | 35.0% |
GGAAAACATATGCTTCATGT+AGG | + | chr4_4:67840562-67840581 | Msa0697830:CDS | 35.0% | |
ATGAGTGATGAGTAGAAAAC+TGG | - | chr4_4:67840801-67840820 | None:intergenic | 35.0% | |
AGATAGTGAACAACATGGGA+AGG | - | chr4_4:67836705-67836724 | None:intergenic | 40.0% | |
GTGTTAGGAGTGAAAGAAAG+AGG | - | chr4_4:67836755-67836774 | None:intergenic | 40.0% | |
!! | ATTTTTCAGTAGCCCGTGAT+GGG | - | chr4_4:67836777-67836796 | None:intergenic | 40.0% |
! | AGGTGTTCTGTTTTCAACAG+AGG | - | chr4_4:67836917-67836936 | None:intergenic | 40.0% |
!! | AATCCAGCATTGGCGAATTA+CGG | + | chr4_4:67837045-67837064 | Msa0697830:CDS | 40.0% |
CTGCAACAAGAAATTGAGTG+TGG | + | chr4_4:67837071-67837090 | Msa0697830:CDS | 40.0% | |
AGAAATTGAGTGTGGATGCA+AGG | + | chr4_4:67837079-67837098 | Msa0697830:CDS | 40.0% | |
GAAATTGAGTGTGGATGCAA+GGG | + | chr4_4:67837080-67837099 | Msa0697830:CDS | 40.0% | |
AAGGTTGACATTGCAAGAGA+AGG | + | chr4_4:67837119-67837138 | Msa0697830:CDS | 40.0% | |
TTGACATTGCAAGAGAAGGT+TGG | + | chr4_4:67837123-67837142 | Msa0697830:CDS | 40.0% | |
CATCAACAGCAGAATTCACA+AGG | - | chr4_4:67837152-67837171 | None:intergenic | 40.0% | |
CTGTTGATGTAAGCAGACTT+GGG | + | chr4_4:67837163-67837182 | Msa0697830:CDS | 40.0% | |
CTTCATGGAGTCTCTTACAT+TGG | + | chr4_4:67837216-67837235 | Msa0697830:CDS | 40.0% | |
GAGAATAGGCATAGGAAAAC+TGG | - | chr4_4:67837280-67837299 | None:intergenic | 40.0% | |
! | GCTTCCTTGTTTCAAACCAT+AGG | + | chr4_4:67837318-67837337 | Msa0697830:CDS | 40.0% |
GAGAAACCTTACCTTTCCTA+TGG | - | chr4_4:67837337-67837356 | None:intergenic | 40.0% | |
! | TTTTGTGTAGGTGGTTTCGA+CGG | + | chr4_4:67837410-67837429 | Msa0697830:intron | 40.0% |
!! | GGTTGGCTGGTTTAACATAT+TGG | + | chr4_4:67837457-67837476 | Msa0697830:CDS | 40.0% |
CTTGTTAGCAAATATGCAGC+AGG | + | chr4_4:67837552-67837571 | Msa0697830:CDS | 40.0% | |
GGTCTACAACAAACTGATGA+TGG | + | chr4_4:67837585-67837604 | Msa0697830:CDS | 40.0% | |
!! | CAGCATATGATGTTGATGAC+TGG | + | chr4_4:67837652-67837671 | Msa0697830:CDS | 40.0% |
ATCACACAGCTCTTAAAAGG+TGG | - | chr4_4:67837827-67837846 | None:intergenic | 40.0% | |
!! | CTTCTTAAAGGTGTTATCCG+TGG | + | chr4_4:67837920-67837939 | Msa0697830:CDS | 40.0% |
CGTGGCAAATGGAAACTAAA+TGG | + | chr4_4:67837938-67837957 | Msa0697830:CDS | 40.0% | |
! | TTTACCTGCTAGAATGGACT+TGG | - | chr4_4:67838508-67838527 | None:intergenic | 40.0% |
ACAGGATTGGATTTGAACTG+TGG | + | chr4_4:67838687-67838706 | Msa0697830:intron | 40.0% | |
TTTCTTGGCCGATATACAGA+AGG | + | chr4_4:67838714-67838733 | Msa0697830:CDS | 40.0% | |
TGACAGCACCTTCTGTATAT+CGG | - | chr4_4:67838725-67838744 | None:intergenic | 40.0% | |
TTTGCGACATTAATGCGTCT+AGG | + | chr4_4:67838795-67838814 | Msa0697830:CDS | 40.0% | |
ATGCGTCTAGGTTTCTTTGA+TGG | + | chr4_4:67838807-67838826 | Msa0697830:CDS | 40.0% | |
TTTCCATAAGGTTGCTTGCT+AGG | - | chr4_4:67838837-67838856 | None:intergenic | 40.0% | |
AAGCAACCTTATGGAAACCT+TGG | + | chr4_4:67838840-67838859 | Msa0697830:CDS | 40.0% | |
TTTGGACCAAGGTTTCCATA+AGG | - | chr4_4:67838849-67838868 | None:intergenic | 40.0% | |
!! | GTGTTGCTTAAAAACTGTGC+AGG | + | chr4_4:67838927-67838946 | Msa0697830:CDS | 40.0% |
ACCTTCGTAGTTTCCAATCA+TGG | - | chr4_4:67839024-67839043 | None:intergenic | 40.0% | |
!! | ATTTGCACCGACTACAATCA+CGG | - | chr4_4:67839302-67839321 | None:intergenic | 40.0% |
CAGGGTTAACATTCTTCTTC+CGG | + | chr4_4:67839348-67839367 | Msa0697830:CDS | 40.0% | |
AGGGTTAACATTCTTCTTCC+GGG | + | chr4_4:67839349-67839368 | Msa0697830:CDS | 40.0% | |
GACATTATGGCAAGAATCAC+AGG | - | chr4_4:67839421-67839440 | None:intergenic | 40.0% | |
GTGATTCTTGCCATAATGTC+TGG | + | chr4_4:67839421-67839440 | Msa0697830:CDS | 40.0% | |
ATTCTTGCCATAATGTCTGG+AGG | + | chr4_4:67839424-67839443 | Msa0697830:CDS | 40.0% | |
! | ATCACAAGCATTTTGTGGGT+TGG | + | chr4_4:67839484-67839503 | Msa0697830:CDS | 40.0% |
!!! | ATTTTGTGGGTTGGTTATCC+TGG | + | chr4_4:67839493-67839512 | Msa0697830:CDS | 40.0% |
CCATAGCTGATGTCATCTTT+GGG | + | chr4_4:67839533-67839552 | Msa0697830:CDS | 40.0% | |
! | GTCAGTGAGATTGACTTACT+TGG | - | chr4_4:67839568-67839587 | None:intergenic | 40.0% |
GTCGTTCGATCTTGATCTAA+TGG | + | chr4_4:67839799-67839818 | Msa0697830:intron | 40.0% | |
TTGCTAAATGCATGAATGCG+TGG | + | chr4_4:67839829-67839848 | Msa0697830:intron | 40.0% | |
TGAATGCGTGGAAATTGTGA+CGG | + | chr4_4:67839841-67839860 | Msa0697830:intron | 40.0% | |
ACGGCTTACAACCTAAATAG+TGG | + | chr4_4:67839860-67839879 | Msa0697830:intron | 40.0% | |
AATTATTGGAACCTAGTGGG+GGG | - | chr4_4:67839904-67839923 | None:intergenic | 40.0% | |
GAATTATTGGAACCTAGTGG+GGG | - | chr4_4:67839905-67839924 | None:intergenic | 40.0% | |
! | GTATACTTGATGACCTCACT+AGG | + | chr4_4:67839977-67839996 | Msa0697830:intron | 40.0% |
GATTGTGGATACCATGTCAT+GGG | - | chr4_4:67840061-67840080 | None:intergenic | 40.0% | |
TGATTGTGGATACCATGTCA+TGG | - | chr4_4:67840062-67840081 | None:intergenic | 40.0% | |
ATCAGGCCTCATGTTCATAT+TGG | - | chr4_4:67840107-67840126 | None:intergenic | 40.0% | |
ACTGTCTTCTCATTTGGAGA+TGG | + | chr4_4:67840175-67840194 | Msa0697830:CDS | 40.0% | |
AAAGGAACAGACACCAATTG+TGG | - | chr4_4:67840241-67840260 | None:intergenic | 40.0% | |
TGTAAGTCACTCGATGTTGT+TGG | + | chr4_4:67840292-67840311 | Msa0697830:CDS | 40.0% | |
TAGCCTTTGATATTCACCTC+AGG | + | chr4_4:67840332-67840351 | Msa0697830:CDS | 40.0% | |
GATCCTGAGGTGAATATCAA+AGG | - | chr4_4:67840338-67840357 | None:intergenic | 40.0% | |
ACCTCAGGATCAAGAACAAA+GGG | + | chr4_4:67840347-67840366 | Msa0697830:CDS | 40.0% | |
! | AAAGCCAACAAGTGTTTCTG+AGG | - | chr4_4:67840433-67840452 | None:intergenic | 40.0% |
! | AACAGGAAAATCAGAAGCAC+TGG | + | chr4_4:67840468-67840487 | Msa0697830:CDS | 40.0% |
!! | TTGAGTGTGGTTGATGAACT+TGG | + | chr4_4:67840520-67840539 | Msa0697830:CDS | 40.0% |
AACATGGGAAGGAATCTCTG+TGG | - | chr4_4:67836694-67836713 | None:intergenic | 45.0% | |
TTCACTCCTAACACCCATCA+CGG | + | chr4_4:67836761-67836780 | Msa0697830:five_prime_UTR | 45.0% | |
!! | CATTTTTCAGTAGCCCGTGA+TGG | - | chr4_4:67836778-67836797 | None:intergenic | 45.0% |
CAGAGGAAAACAGAGACGTT+AGG | - | chr4_4:67836937-67836956 | None:intergenic | 45.0% | |
! | TTTGCCACACTTTTGCTGAG+TGG | + | chr4_4:67836970-67836989 | Msa0697830:CDS | 45.0% |
AGGCGAAAACTGCAGATGTT+TGG | - | chr4_4:67837011-67837030 | None:intergenic | 45.0% | |
TGTTGCCAAGAATCCAGCAT+TGG | + | chr4_4:67837035-67837054 | Msa0697830:CDS | 45.0% | |
ATTCGCCAATGCTGGATTCT+TGG | - | chr4_4:67837043-67837062 | None:intergenic | 45.0% | |
!! | ATCCAGCATTGGCGAATTAC+GGG | + | chr4_4:67837046-67837065 | Msa0697830:CDS | 45.0% |
GCAATGTCAACCTTCTCACA+AGG | - | chr4_4:67837113-67837132 | None:intergenic | 45.0% | |
GCTGTTGATGTAAGCAGACT+TGG | + | chr4_4:67837162-67837181 | Msa0697830:CDS | 45.0% | |
GAGTCTCTTACATTGGTCCA+GGG | + | chr4_4:67837223-67837242 | Msa0697830:CDS | 45.0% | |
ACATTGGAAAAACGAGTCCC+TGG | - | chr4_4:67837243-67837262 | None:intergenic | 45.0% | |
GGTTGCTCCAGGTATAACAT+TGG | - | chr4_4:67837259-67837278 | None:intergenic | 45.0% | |
ATAGGAAAACTGGTTGCTCC+AGG | - | chr4_4:67837270-67837289 | None:intergenic | 45.0% | |
GCTGCAATGAGAATAGGCAT+AGG | - | chr4_4:67837288-67837307 | None:intergenic | 45.0% | |
ACAAGTAAAGGGTCTTCTCC+TGG | - | chr4_4:67837537-67837556 | None:intergenic | 45.0% | |
TGGAGACTCCAACAAGCTTA+AGG | + | chr4_4:67837605-67837624 | Msa0697830:CDS | 45.0% | |
AGCAGCAACCTTAAGCTTGT+TGG | - | chr4_4:67837616-67837635 | None:intergenic | 45.0% | |
CACAGCTCTTAAAAGGTGGT+TGG | - | chr4_4:67837823-67837842 | None:intergenic | 45.0% | |
GCTGACCCTGATCTTCTTAA+AGG | + | chr4_4:67837908-67837927 | Msa0697830:CDS | 45.0% | |
! | AAGGTGTTATCCGTGGCAAA+TGG | + | chr4_4:67837927-67837946 | Msa0697830:CDS | 45.0% |
CTGTAATTCTATCCGGGTTG+AGG | + | chr4_4:67838104-67838123 | Msa0697830:intron | 45.0% | |
GATCCTAGCAAGCAACCTTA+TGG | + | chr4_4:67838831-67838850 | Msa0697830:CDS | 45.0% | |
! | TGCAGACATCTTTTGGACCA+AGG | - | chr4_4:67838860-67838879 | None:intergenic | 45.0% |
! | GCTGAAGTGCAGACATCTTT+TGG | - | chr4_4:67838867-67838886 | None:intergenic | 45.0% |
TCCCAATGCCAATGCTACTA+GGG | + | chr4_4:67838998-67839017 | Msa0697830:CDS | 45.0% | |
AATCATGGCCCTAGTAGCAT+TGG | - | chr4_4:67839009-67839028 | None:intergenic | 45.0% | |
AATGCTACTAGGGCCATGAT+TGG | + | chr4_4:67839008-67839027 | Msa0697830:CDS | 45.0% | |
GCCATGATTGGAAACTACGA+AGG | + | chr4_4:67839020-67839039 | Msa0697830:CDS | 45.0% | |
TTGTGGGAACTAAGGCTGTT+AGG | - | chr4_4:67839195-67839214 | None:intergenic | 45.0% | |
AGCAAAGCTTGTGGGAACTA+AGG | - | chr4_4:67839203-67839222 | None:intergenic | 45.0% | |
! | GCATTGGTGCATTGAACATC+AGG | - | chr4_4:67839235-67839254 | None:intergenic | 45.0% |
! | TGCTGAGGCTGCAATCTTTT+TGG | - | chr4_4:67839272-67839291 | None:intergenic | 45.0% |
GATGCAACCGTGATTGTAGT+CGG | + | chr4_4:67839292-67839311 | Msa0697830:CDS | 45.0% | |
CGGTGCAAATCTTGCAATAG+AGG | + | chr4_4:67839312-67839331 | Msa0697830:CDS | 45.0% | |
TGAAGTTGCAAATGCAGCCA+AGG | + | chr4_4:67839393-67839412 | Msa0697830:CDS | 45.0% | |
GAAGTTGCAAATGCAGCCAA+GGG | + | chr4_4:67839394-67839413 | Msa0697830:CDS | 45.0% | |
AAGTTGCAAATGCAGCCAAG+GGG | + | chr4_4:67839395-67839414 | Msa0697830:CDS | 45.0% | |
GCCATAGCTGATGTCATCTT+TGG | + | chr4_4:67839532-67839551 | Msa0697830:CDS | 45.0% | |
CCCAAAGATGACATCAGCTA+TGG | - | chr4_4:67839536-67839555 | None:intergenic | 45.0% | |
GGGGAAACTGTCTTCTCATT+TGG | + | chr4_4:67840169-67840188 | Msa0697830:CDS | 45.0% | |
CACCTCAGGATCAAGAACAA+AGG | + | chr4_4:67840346-67840365 | Msa0697830:CDS | 45.0% | |
TCCCTTTGTTCTTGATCCTG+AGG | - | chr4_4:67840351-67840370 | None:intergenic | 45.0% | |
TGCACCTCAGAAACACTTGT+TGG | + | chr4_4:67840426-67840445 | Msa0697830:CDS | 45.0% | |
TCACTCCTAACACCCATCAC+GGG | + | chr4_4:67836762-67836781 | Msa0697830:five_prime_UTR | 50.0% | |
ACCACCACTCAGCAAAAGTG+TGG | - | chr4_4:67836977-67836996 | None:intergenic | 50.0% | |
TGGATTCTTGGCAACATCGC+AGG | - | chr4_4:67837031-67837050 | None:intergenic | 50.0% | |
AACCCGTAATTCGCCAATGC+TGG | - | chr4_4:67837051-67837070 | None:intergenic | 50.0% | |
GGGTGAAAGACCTTGTGAGA+AGG | + | chr4_4:67837100-67837119 | Msa0697830:CDS | 50.0% | |
! | TGGTGGTCTGAAGCACTTCA+TGG | + | chr4_4:67837201-67837220 | Msa0697830:CDS | 50.0% |
GGAGTCTCTTACATTGGTCC+AGG | + | chr4_4:67837222-67837241 | Msa0697830:CDS | 50.0% | |
GCAAGAGCAATGCACAACGT+CGG | + | chr4_4:67837435-67837454 | Msa0697830:CDS | 50.0% | |
CAAGAGCAATGCACAACGTC+GGG | + | chr4_4:67837436-67837455 | Msa0697830:CDS | 50.0% | |
TCTTGACCTCTTCCCCATCT+TGG | - | chr4_4:67837510-67837529 | None:intergenic | 50.0% | |
GGAAGAGGTCAAGAAACACC+AGG | + | chr4_4:67837516-67837535 | Msa0697830:CDS | 50.0% | |
TATGCAGCAGGGTACGTGAA+AGG | + | chr4_4:67837564-67837583 | Msa0697830:CDS | 50.0% | |
GCGTTACACCTTCAATGCTG+TGG | + | chr4_4:67837686-67837705 | Msa0697830:CDS | 50.0% | |
AGATCAGGGTCAGCACAAGT+CGG | - | chr4_4:67837902-67837921 | None:intergenic | 50.0% | |
! | CAGGGGTCTTGGTGTAATGT+TGG | - | chr4_4:67838473-67838492 | None:intergenic | 50.0% |
ACATTACACCAAGACCCCTG+AGG | + | chr4_4:67838473-67838492 | Msa0697830:CDS | 50.0% | |
!! | ACAGAAGGTGCTGTCAAGCA+AGG | + | chr4_4:67838729-67838748 | Msa0697830:CDS | 50.0% |
!! | CAGAAGGTGCTGTCAAGCAA+GGG | + | chr4_4:67838730-67838749 | Msa0697830:CDS | 50.0% |
GCTGTCAAGCAAGGGCTTAT+AGG | + | chr4_4:67838738-67838757 | Msa0697830:CDS | 50.0% | |
TGTCTGCACTTCAGCAAACC+AGG | + | chr4_4:67838872-67838891 | Msa0697830:CDS | 50.0% | |
GTCCCAATGCCAATGCTACT+AGG | + | chr4_4:67838997-67839016 | Msa0697830:CDS | 50.0% | |
!! | GCCCTAGTAGCATTGGCATT+GGG | - | chr4_4:67839002-67839021 | None:intergenic | 50.0% |
AAGGCTGTTAGGCCTTGCAA+AGG | - | chr4_4:67839184-67839203 | None:intergenic | 50.0% | |
GGCATCATCTAGTGCAGCAT+TGG | - | chr4_4:67839251-67839270 | None:intergenic | 50.0% | |
AATCACGGTTGCATCTGCTG+AGG | - | chr4_4:67839287-67839306 | None:intergenic | 50.0% | |
TAGAGGCAGAGAGTCATGAC+AGG | + | chr4_4:67839329-67839348 | Msa0697830:CDS | 50.0% | |
AGAGGCAGAGAGTCATGACA+GGG | + | chr4_4:67839330-67839349 | Msa0697830:CDS | 50.0% | |
ACTAACTGTTGCTGCTGTCC+CGG | - | chr4_4:67839370-67839389 | None:intergenic | 50.0% | |
CTTGCCATAATGTCTGGAGG+AGG | + | chr4_4:67839427-67839446 | Msa0697830:CDS | 50.0% | |
CATGCCTCCTCCAGACATTA+TGG | - | chr4_4:67839434-67839453 | None:intergenic | 50.0% | |
CATAATGTCTGGAGGAGGCA+TGG | + | chr4_4:67839432-67839451 | Msa0697830:CDS | 50.0% | |
GTTGGTTATCCTGGAGAAGC+TGG | + | chr4_4:67839502-67839521 | Msa0697830:CDS | 50.0% | |
CATGAAAATTGCCCCCCACT+AGG | + | chr4_4:67839890-67839909 | Msa0697830:intron | 50.0% | |
GGCAACAGAAAAGTTGCCCT+AGG | + | chr4_4:67840541-67840560 | Msa0697830:CDS | 50.0% | |
!! | AGTAGCCCGTGATGGGTGTT+AGG | - | chr4_4:67836770-67836789 | None:intergenic | 55.0% |
! | GCCACACTTTTGCTGAGTGG+TGG | + | chr4_4:67836973-67836992 | Msa0697830:CDS | 55.0% |
AGCAATGCACAACGTCGGGT+TGG | + | chr4_4:67837440-67837459 | Msa0697830:CDS | 55.0% | |
AGGGATCCAAGATGGGGAAG+AGG | + | chr4_4:67837501-67837520 | Msa0697830:CDS | 55.0% | |
ACTTGGCTGCAGCTTCCTCA+GGG | - | chr4_4:67838491-67838510 | None:intergenic | 55.0% | |
GCAGCCAAGTCCATTCTAGC+AGG | + | chr4_4:67838501-67838520 | Msa0697830:CDS | 55.0% | |
AGCTAGCTCGTGAAGCTGCA+AGG | + | chr4_4:67838895-67838914 | Msa0697830:CDS | 55.0% | |
CTCGTGAAGCTGCAAGGCAA+GGG | + | chr4_4:67838901-67838920 | Msa0697830:CDS | 55.0% | |
!! | GGCCCTAGTAGCATTGGCAT+TGG | - | chr4_4:67839003-67839022 | None:intergenic | 55.0% |
GTTCCCACAAGCTTTGCTGC+TGG | + | chr4_4:67839205-67839224 | Msa0697830:CDS | 55.0% | |
CAGCCAGCAGCAAAGCTTGT+GGG | - | chr4_4:67839211-67839230 | None:intergenic | 55.0% | |
ACAGCCAGCAGCAAAGCTTG+TGG | - | chr4_4:67839212-67839231 | None:intergenic | 55.0% | |
GGTTATCCTGGAGAAGCTGG+TGG | + | chr4_4:67839505-67839524 | Msa0697830:CDS | 55.0% | |
GTGGAAGGCTACCCATGACA+TGG | + | chr4_4:67840047-67840066 | Msa0697830:CDS | 55.0% | |
ATGAGGCCTGATCCTGCTAC+AGG | + | chr4_4:67840115-67840134 | Msa0697830:CDS | 55.0% | |
TGAGGTGCATTGTGCACTGC+AGG | - | chr4_4:67840415-67840434 | None:intergenic | 55.0% | |
!! | ATGCACAACGTCGGGTTGGC+TGG | + | chr4_4:67837444-67837463 | Msa0697830:CDS | 60.0% |
TGCAGCTTCCTCAGGGGTCT+TGG | - | chr4_4:67838484-67838503 | None:intergenic | 60.0% | |
CTTGGCTGCAGCTTCCTCAG+GGG | - | chr4_4:67838490-67838509 | None:intergenic | 60.0% | |
GACTTGGCTGCAGCTTCCTC+AGG | - | chr4_4:67838492-67838511 | None:intergenic | 60.0% | |
CAGCTTCACGAGCTAGCTCC+TGG | - | chr4_4:67838893-67838912 | None:intergenic | 60.0% | |
GCTCGTGAAGCTGCAAGGCA+AGG | + | chr4_4:67838900-67838919 | Msa0697830:CDS | 60.0% | |
GGCAAGAATCACAGGCCCCT+TGG | - | chr4_4:67839413-67839432 | None:intergenic | 60.0% | |
GGGTAGCCTGTAGCAGGATC+AGG | - | chr4_4:67840124-67840143 | None:intergenic | 60.0% | |
GATCCTGCTACAGGCTACCC+TGG | + | chr4_4:67840124-67840143 | Msa0697830:CDS | 60.0% | |
CTACCAGGGTAGCCTGTAGC+AGG | - | chr4_4:67840130-67840149 | None:intergenic | 60.0% | |
GGTGCATTGTGCACTGCAGG+AGG | - | chr4_4:67840412-67840431 | None:intergenic | 60.0% | |
GCAGCTCCACCAGCTTCTCC+AGG | - | chr4_4:67839514-67839533 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4_4 | gene | 67836649 | 67840849 | 67836649 | ID=Msa0697830;Name=Msa0697830 |
chr4_4 | mRNA | 67836649 | 67840849 | 67836649 | ID=Msa0697830-mRNA-1;Parent=Msa0697830;Name=Msa0697830-mRNA-1;_AED=0.06;_eAED=0.06;_QI=261|1|1|1|1|1|7|231|774 |
chr4_4 | exon | 67836649 | 67837344 | 67836649 | ID=Msa0697830-mRNA-1:exon:20077;Parent=Msa0697830-mRNA-1 |
chr4_4 | exon | 67837420 | 67837707 | 67837420 | ID=Msa0697830-mRNA-1:exon:20078;Parent=Msa0697830-mRNA-1 |
chr4_4 | exon | 67837791 | 67837960 | 67837791 | ID=Msa0697830-mRNA-1:exon:20079;Parent=Msa0697830-mRNA-1 |
chr4_4 | exon | 67838425 | 67838522 | 67838425 | ID=Msa0697830-mRNA-1:exon:20080;Parent=Msa0697830-mRNA-1 |
chr4_4 | exon | 67838691 | 67839041 | 67838691 | ID=Msa0697830-mRNA-1:exon:20081;Parent=Msa0697830-mRNA-1 |
chr4_4 | exon | 67839158 | 67839568 | 67839158 | ID=Msa0697830-mRNA-1:exon:20082;Parent=Msa0697830-mRNA-1 |
chr4_4 | exon | 67840047 | 67840849 | 67840047 | ID=Msa0697830-mRNA-1:exon:20083;Parent=Msa0697830-mRNA-1 |
chr4_4 | five_prime_UTR | 67836649 | 67836909 | 67836649 | ID=Msa0697830-mRNA-1:five_prime_utr;Parent=Msa0697830-mRNA-1 |
chr4_4 | CDS | 67836910 | 67837344 | 67836910 | ID=Msa0697830-mRNA-1:cds;Parent=Msa0697830-mRNA-1 |
chr4_4 | CDS | 67837420 | 67837707 | 67837420 | ID=Msa0697830-mRNA-1:cds;Parent=Msa0697830-mRNA-1 |
chr4_4 | CDS | 67837791 | 67837960 | 67837791 | ID=Msa0697830-mRNA-1:cds;Parent=Msa0697830-mRNA-1 |
chr4_4 | CDS | 67838425 | 67838522 | 67838425 | ID=Msa0697830-mRNA-1:cds;Parent=Msa0697830-mRNA-1 |
chr4_4 | CDS | 67838691 | 67839041 | 67838691 | ID=Msa0697830-mRNA-1:cds;Parent=Msa0697830-mRNA-1 |
chr4_4 | CDS | 67839158 | 67839568 | 67839158 | ID=Msa0697830-mRNA-1:cds;Parent=Msa0697830-mRNA-1 |
chr4_4 | CDS | 67840047 | 67840618 | 67840047 | ID=Msa0697830-mRNA-1:cds;Parent=Msa0697830-mRNA-1 |
chr4_4 | three_prime_UTR | 67840619 | 67840849 | 67840619 | ID=Msa0697830-mRNA-1:three_prime_utr;Parent=Msa0697830-mRNA-1 |
Gene Sequence |
Protein sequence |