Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0557680 | RHN62398.1 | 97.222 | 144 | 3 | 1 | 1 | 143 | 11 | 154 | 3.44e-95 | 281 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0557680 | sp|Q38741|SBP1_ANTMA | 57.554 | 139 | 49 | 2 | 1 | 139 | 1 | 129 | 2.64e-46 | 149 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0557680 | A0A396IC84 | 97.222 | 144 | 3 | 1 | 1 | 143 | 11 | 154 | 1.64e-95 | 281 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0557680 | TF | SBP |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006700 | Msa0557680 | 0.800058 | 1.721681e-48 | -8.615850e-47 |
| Msa0020630 | Msa0557680 | 0.837220 | 5.910095e-57 | -8.615850e-47 |
| Msa0027540 | Msa0557680 | 0.802508 | 5.425882e-49 | -8.615850e-47 |
| Msa0029020 | Msa0557680 | -0.824040 | 1.000853e-53 | -8.615850e-47 |
| Msa0036150 | Msa0557680 | 0.818890 | 1.548117e-52 | -8.615850e-47 |
| Msa0038350 | Msa0557680 | -0.856273 | 3.595722e-62 | -8.615850e-47 |
| Msa0044100 | Msa0557680 | 0.815539 | 8.777013e-52 | -8.615850e-47 |
| Msa0044710 | Msa0557680 | 0.806310 | 8.754113e-50 | -8.615850e-47 |
| Msa0046820 | Msa0557680 | 0.816717 | 4.788149e-52 | -8.615850e-47 |
| Msa0050940 | Msa0557680 | 0.803959 | 2.717482e-49 | -8.615850e-47 |
| Msa0054640 | Msa0557680 | 0.809661 | 1.694632e-50 | -8.615850e-47 |
| Msa0075310 | Msa0557680 | 0.801998 | 6.910051e-49 | -8.615850e-47 |
| Msa0088550 | Msa0557680 | 0.806140 | 9.506559e-50 | -8.615850e-47 |
| Msa0090040 | Msa0557680 | -0.828582 | 8.300184e-55 | -8.615850e-47 |
| Msa0094100 | Msa0557680 | 0.831307 | 1.797959e-55 | -8.615850e-47 |
| Msa0114250 | Msa0557680 | 0.803240 | 3.831402e-49 | -8.615850e-47 |
| Msa0124110 | Msa0557680 | 0.809539 | 1.799906e-50 | -8.615850e-47 |
| Msa0135360 | Msa0557680 | 0.802358 | 5.827504e-49 | -8.615850e-47 |
| Msa0137120 | Msa0557680 | -0.828927 | 6.846946e-55 | -8.615850e-47 |
| Msa0145670 | Msa0557680 | 0.817499 | 3.195334e-52 | -8.615850e-47 |
| Msa0159750 | Msa0557680 | 0.830932 | 2.222280e-55 | -8.615850e-47 |
| Msa0162050 | Msa0557680 | 0.800310 | 1.530325e-48 | -8.615850e-47 |
| Msa0163810 | Msa0557680 | 0.830715 | 2.512770e-55 | -8.615850e-47 |
| Msa0164360 | Msa0557680 | 0.809931 | 1.482373e-50 | -8.615850e-47 |
| Msa0164660 | Msa0557680 | 0.855282 | 7.002406e-62 | -8.615850e-47 |
| Msa0165430 | Msa0557680 | 0.821913 | 3.136128e-53 | -8.615850e-47 |
| Msa0168100 | Msa0557680 | 0.811376 | 7.222761e-51 | -8.615850e-47 |
| Msa0179860 | Msa0557680 | 0.805028 | 1.626485e-49 | -8.615850e-47 |
| Msa0183750 | Msa0557680 | 0.826792 | 2.233622e-54 | -8.615850e-47 |
| Msa0185480 | Msa0557680 | 0.802822 | 4.675257e-49 | -8.615850e-47 |
| Msa0185640 | Msa0557680 | -0.862041 | 6.710045e-64 | -8.615850e-47 |
| Msa0196130 | Msa0557680 | -0.811928 | 5.478644e-51 | -8.615850e-47 |
| Msa0201330 | Msa0557680 | 0.836702 | 8.015983e-57 | -8.615850e-47 |
| Msa0201370 | Msa0557680 | 0.819805 | 9.575943e-53 | -8.615850e-47 |
| Msa0207000 | Msa0557680 | 0.814901 | 1.216890e-51 | -8.615850e-47 |
| Msa0208390 | Msa0557680 | 0.852444 | 4.597245e-61 | -8.615850e-47 |
| Msa0233190 | Msa0557680 | 0.817921 | 2.566657e-52 | -8.615850e-47 |
| Msa0365360 | Msa0557680 | 0.817111 | 3.905634e-52 | -8.615850e-47 |
| Msa0371420 | Msa0557680 | -0.821978 | 3.027838e-53 | -8.615850e-47 |
| Msa0371610 | Msa0557680 | 0.825015 | 5.901603e-54 | -8.615850e-47 |
| Msa0382200 | Msa0557680 | 0.809765 | 1.609299e-50 | -8.615850e-47 |
| Msa0389060 | Msa0557680 | 0.811694 | 6.158033e-51 | -8.615850e-47 |
| Msa0409820 | Msa0557680 | 0.807108 | 5.938431e-50 | -8.615850e-47 |
| Msa0413740 | Msa0557680 | 0.806177 | 9.337773e-50 | -8.615850e-47 |
| Msa0414070 | Msa0557680 | 0.831420 | 1.685972e-55 | -8.615850e-47 |
| Msa0416800 | Msa0557680 | 0.802292 | 6.013608e-49 | -8.615850e-47 |
| Msa0418000 | Msa0557680 | 0.849302 | 3.528610e-60 | -8.615850e-47 |
| Msa0419990 | Msa0557680 | 0.813632 | 2.319847e-51 | -8.615850e-47 |
| Msa0423360 | Msa0557680 | -0.831436 | 1.670887e-55 | -8.615850e-47 |
| Msa0431710 | Msa0557680 | 0.824670 | 7.118212e-54 | -8.615850e-47 |
| Msa0437710 | Msa0557680 | 0.848126 | 7.475570e-60 | -8.615850e-47 |
| Msa0458790 | Msa0557680 | 0.804842 | 1.778730e-49 | -8.615850e-47 |
| Msa0459120 | Msa0557680 | 0.816838 | 4.499268e-52 | -8.615850e-47 |
| Msa0463460 | Msa0557680 | 0.848496 | 5.906547e-60 | -8.615850e-47 |
| Msa0465680 | Msa0557680 | -0.818953 | 1.497712e-52 | -8.615850e-47 |
| Msa0465930 | Msa0557680 | 0.823806 | 1.135889e-53 | -8.615850e-47 |
| Msa0465970 | Msa0557680 | 0.831698 | 1.440484e-55 | -8.615850e-47 |
| Msa0470340 | Msa0557680 | 0.804512 | 2.084485e-49 | -8.615850e-47 |
| Msa0240780 | Msa0557680 | 0.825570 | 4.361309e-54 | -8.615850e-47 |
| Msa0243910 | Msa0557680 | 0.852870 | 3.476479e-61 | -8.615850e-47 |
| Msa0243930 | Msa0557680 | 0.854320 | 1.331220e-61 | -8.615850e-47 |
| Msa0257250 | Msa0557680 | 0.808916 | 2.447938e-50 | -8.615850e-47 |
| Msa0258670 | Msa0557680 | -0.825207 | 5.317253e-54 | -8.615850e-47 |
| Msa0264940 | Msa0557680 | -0.827487 | 1.523050e-54 | -8.615850e-47 |
| Msa0265820 | Msa0557680 | 0.833704 | 4.577629e-56 | -8.615850e-47 |
| Msa0269360 | Msa0557680 | 0.831740 | 1.406123e-55 | -8.615850e-47 |
| Msa0270440 | Msa0557680 | -0.803036 | 4.222973e-49 | -8.615850e-47 |
| Msa0272480 | Msa0557680 | -0.804645 | 1.956106e-49 | -8.615850e-47 |
| Msa0275670 | Msa0557680 | 0.843792 | 1.126492e-58 | -8.615850e-47 |
| Msa0282170 | Msa0557680 | 0.802478 | 5.504863e-49 | -8.615850e-47 |
| Msa0282590 | Msa0557680 | 0.835393 | 1.722934e-56 | -8.615850e-47 |
| Msa0288240 | Msa0557680 | 0.800592 | 1.340503e-48 | -8.615850e-47 |
| Msa0288330 | Msa0557680 | 0.814694 | 1.352453e-51 | -8.615850e-47 |
| Msa0298940 | Msa0557680 | 0.821688 | 3.535566e-53 | -8.615850e-47 |
| Msa0302990 | Msa0557680 | -0.830480 | 2.867276e-55 | -8.615850e-47 |
| Msa0304740 | Msa0557680 | 0.837786 | 4.232478e-57 | -8.615850e-47 |
| Msa0304990 | Msa0557680 | 0.809402 | 1.926114e-50 | -8.615850e-47 |
| Msa0309080 | Msa0557680 | -0.801288 | 9.663917e-49 | -8.615850e-47 |
| Msa0311580 | Msa0557680 | 0.804139 | 2.493336e-49 | -8.615850e-47 |
| Msa0312690 | Msa0557680 | -0.812508 | 4.092802e-51 | -8.615850e-47 |
| Msa0318310 | Msa0557680 | 0.802530 | 5.370737e-49 | -8.615850e-47 |
| Msa0325470 | Msa0557680 | 0.817658 | 2.942015e-52 | -8.615850e-47 |
| Msa0326670 | Msa0557680 | 0.808080 | 3.691258e-50 | -8.615850e-47 |
| Msa0331590 | Msa0557680 | 0.843481 | 1.364990e-58 | -8.615850e-47 |
| Msa0342200 | Msa0557680 | 0.852912 | 3.380137e-61 | -8.615850e-47 |
| Msa0342340 | Msa0557680 | -0.862114 | 6.371048e-64 | -8.615850e-47 |
| Msa0345010 | Msa0557680 | 0.809920 | 1.490767e-50 | -8.615850e-47 |
| Msa0362740 | Msa0557680 | 0.810985 | 8.776762e-51 | -8.615850e-47 |
| Msa0490350 | Msa0557680 | 0.804825 | 1.793598e-49 | -8.615850e-47 |
| Msa0505390 | Msa0557680 | 0.804833 | 1.786927e-49 | -8.615850e-47 |
| Msa0505660 | Msa0557680 | 0.827878 | 1.226881e-54 | -8.615850e-47 |
| Msa0508200 | Msa0557680 | 0.808384 | 3.180955e-50 | -8.615850e-47 |
| Msa0509020 | Msa0557680 | 0.820203 | 7.766552e-53 | -8.615850e-47 |
| Msa0509970 | Msa0557680 | 0.852604 | 4.140586e-61 | -8.615850e-47 |
| Msa0517340 | Msa0557680 | 0.801154 | 1.029519e-48 | -8.615850e-47 |
| Msa0520590 | Msa0557680 | 0.806392 | 8.413174e-50 | -8.615850e-47 |
| Msa0524050 | Msa0557680 | 0.818550 | 1.848540e-52 | -8.615850e-47 |
| Msa0524120 | Msa0557680 | 0.804334 | 2.270868e-49 | -8.615850e-47 |
| Msa0524890 | Msa0557680 | -0.808155 | 3.558511e-50 | -8.615850e-47 |
| Msa0526640 | Msa0557680 | -0.826397 | 2.775119e-54 | -8.615850e-47 |
| Msa0531430 | Msa0557680 | 0.808294 | 3.324434e-50 | -8.615850e-47 |
| Msa0532300 | Msa0557680 | 0.807687 | 4.475285e-50 | -8.615850e-47 |
| Msa0540070 | Msa0557680 | 0.804617 | 1.982458e-49 | -8.615850e-47 |
| Msa0557680 | Msa0563140 | 0.810135 | 1.339555e-50 | -8.615850e-47 |
| Msa0557680 | Msa0565490 | 0.804523 | 2.073469e-49 | -8.615850e-47 |
| Msa0557680 | Msa0575250 | 0.812100 | 5.023569e-51 | -8.615850e-47 |
| Msa0557680 | Msa0576990 | -0.809144 | 2.188039e-50 | -8.615850e-47 |
| Msa0557680 | Msa0582110 | 0.816386 | 5.681488e-52 | -8.615850e-47 |
| Msa0557680 | Msa0589600 | 0.817738 | 2.822175e-52 | -8.615850e-47 |
| Msa0557680 | Msa0591780 | 0.827176 | 1.807993e-54 | -8.615850e-47 |
| Msa0557680 | Msa0596100 | 0.805522 | 1.281872e-49 | -8.615850e-47 |
| Msa0557680 | Msa0616560 | -0.812697 | 3.721922e-51 | -8.615850e-47 |
| Msa0557680 | Msa0617370 | 0.807531 | 4.830148e-50 | -8.615850e-47 |
| Msa0557680 | Msa0618290 | 0.824794 | 6.654189e-54 | -8.615850e-47 |
| Msa0557680 | Msa0619330 | 0.805773 | 1.135144e-49 | -8.615850e-47 |
| Msa0557680 | Msa0621890 | 0.839865 | 1.226745e-57 | -8.615850e-47 |
| Msa0557680 | Msa0624730 | 0.817070 | 3.989209e-52 | -8.615850e-47 |
| Msa0557680 | Msa0628640 | 0.807743 | 4.354215e-50 | -8.615850e-47 |
| Msa0557680 | Msa0629370 | 0.806898 | 6.578005e-50 | -8.615850e-47 |
| Msa0557680 | Msa0631120 | 0.805329 | 1.406713e-49 | -8.615850e-47 |
| Msa0557680 | Msa0647000 | 0.813843 | 2.084607e-51 | -8.615850e-47 |
| Msa0557680 | Msa0653020 | 0.833890 | 4.111577e-56 | -8.615850e-47 |
| Msa0557680 | Msa0655990 | -0.813970 | 1.954383e-51 | -8.615850e-47 |
| Msa0557680 | Msa0657670 | 0.828411 | 9.124351e-55 | -8.615850e-47 |
| Msa0557680 | Msa0660880 | -0.817019 | 4.096433e-52 | -8.615850e-47 |
| Msa0557680 | Msa0668090 | 0.805381 | 1.371784e-49 | -8.615850e-47 |
| Msa0557680 | Msa0674220 | 0.815743 | 7.905790e-52 | -8.615850e-47 |
| Msa0557680 | Msa0688550 | 0.802946 | 4.407552e-49 | -8.615850e-47 |
| Msa0557680 | Msa0695410 | 0.843125 | 1.698622e-58 | -8.615850e-47 |
| Msa0557680 | Msa0699920 | -0.812814 | 3.508596e-51 | -8.615850e-47 |
| Msa0557680 | Msa0701770 | 0.846381 | 2.250703e-59 | -8.615850e-47 |
| Msa0557680 | Msa0701840 | -0.828474 | 8.812030e-55 | -8.615850e-47 |
| Msa0557680 | Msa0707780 | 0.802352 | 5.843698e-49 | -8.615850e-47 |
| Msa0557680 | Msa0714600 | 0.825271 | 5.135163e-54 | -8.615850e-47 |
| Msa0557680 | Msa0715310 | 0.848019 | 8.000242e-60 | -8.615850e-47 |
| Msa0557680 | Msa0716450 | 0.814531 | 1.469099e-51 | -8.615850e-47 |
| Msa0557680 | Msa0717260 | 0.810341 | 1.209654e-50 | -8.615850e-47 |
| Msa0557680 | Msa0718240 | 0.830939 | 2.214120e-55 | -8.615850e-47 |
| Msa0557680 | Msa0719490 | -0.845364 | 4.252588e-59 | -8.615850e-47 |
| Msa0557680 | Msa0722930 | 0.848763 | 4.981028e-60 | -8.615850e-47 |
| Msa0557680 | Msa0723140 | 0.848314 | 6.631155e-60 | -8.615850e-47 |
| Msa0557680 | Msa0725480 | -0.807140 | 5.846380e-50 | -8.615850e-47 |
| Msa0557680 | Msa0726610 | 0.807402 | 5.143708e-50 | -8.615850e-47 |
| Msa0557680 | Msa0731710 | 0.802945 | 4.408895e-49 | -8.615850e-47 |
| Msa0557680 | Msa0736060 | 0.801674 | 8.055752e-49 | -8.615850e-47 |
| Msa0557680 | Msa0748610 | 0.824650 | 7.195275e-54 | -8.615850e-47 |
| Msa0557680 | Msa0749550 | 0.838776 | 2.351836e-57 | -8.615850e-47 |
| Msa0557680 | Msa0749610 | 0.839704 | 1.351211e-57 | -8.615850e-47 |
| Msa0557680 | Msa0756480 | 0.800849 | 1.188474e-48 | -8.615850e-47 |
| Msa0557680 | Msa0756630 | -0.819426 | 1.168920e-52 | -8.615850e-47 |
| Msa0557680 | Msa0757180 | 0.800714 | 1.265912e-48 | -8.615850e-47 |
| Msa0557680 | Msa0757310 | 0.810331 | 1.215323e-50 | -8.615850e-47 |
| Msa0557680 | Msa0758320 | 0.802267 | 6.084603e-49 | -8.615850e-47 |
| Msa0557680 | Msa0766100 | -0.812773 | 3.582134e-51 | -8.615850e-47 |
| Msa0557680 | Msa0770430 | 0.810534 | 1.099040e-50 | -8.615850e-47 |
| Msa0557680 | Msa0773610 | 0.856604 | 2.874755e-62 | -8.615850e-47 |
| Msa0557680 | Msa0788360 | 0.806053 | 9.915694e-50 | -8.615850e-47 |
| Msa0557680 | Msa0789570 | 0.805887 | 1.074513e-49 | -8.615850e-47 |
| Msa0557680 | Msa0792510 | 0.848177 | 7.235479e-60 | -8.615850e-47 |
| Msa0557680 | Msa0799030 | 0.809456 | 1.875850e-50 | -8.615850e-47 |
| Msa0557680 | Msa0799290 | -0.800420 | 1.453727e-48 | -8.615850e-47 |
| Msa0557680 | Msa0806210 | 0.825809 | 3.828280e-54 | -8.615850e-47 |
| Msa0557680 | Msa0811000 | 0.844223 | 8.635524e-59 | -8.615850e-47 |
| Msa0557680 | Msa0820670 | 0.804267 | 2.345301e-49 | -8.615850e-47 |
| Msa0557680 | Msa0826650 | 0.807422 | 5.094412e-50 | -8.615850e-47 |
| Msa0557680 | Msa0828570 | 0.817258 | 3.619253e-52 | -8.615850e-47 |
| Msa0557680 | Msa0835510 | 0.805509 | 1.289743e-49 | -8.615850e-47 |
| Msa0557680 | Msa0835920 | 0.805714 | 1.168272e-49 | -8.615850e-47 |
| Msa0557680 | Msa0836680 | 0.816235 | 6.139837e-52 | -8.615850e-47 |
| Msa0557680 | Msa0837510 | -0.801540 | 8.581191e-49 | -8.615850e-47 |
| Msa0557680 | Msa0837980 | 0.816071 | 6.678842e-52 | -8.615850e-47 |
| Msa0557680 | Msa0837990 | 0.869173 | 3.774064e-66 | -8.615850e-47 |
| Msa0557680 | Msa0839330 | 0.821017 | 5.047424e-53 | -8.615850e-47 |
| Msa0557680 | Msa0842050 | 0.809560 | 1.781162e-50 | -8.615850e-47 |
| Msa0557680 | Msa0843280 | 0.822780 | 1.972168e-53 | -8.615850e-47 |
| Msa0557680 | Msa0847200 | 0.827892 | 1.217044e-54 | -8.615850e-47 |
| Msa0557680 | Msa0862020 | 0.825380 | 4.839068e-54 | -8.615850e-47 |
| Msa0557680 | Msa0864690 | 0.802171 | 6.368605e-49 | -8.615850e-47 |
| Msa0557680 | Msa0880080 | 0.816593 | 5.104139e-52 | -8.615850e-47 |
| Msa0557680 | Msa0887000 | 0.804692 | 1.912075e-49 | -8.615850e-47 |
| Msa0557680 | Msa0890250 | 0.801779 | 7.665024e-49 | -8.615850e-47 |
| Msa0557680 | Msa0896210 | 0.812293 | 4.560700e-51 | -8.615850e-47 |
| Msa0557680 | Msa0900200 | 0.807235 | 5.580954e-50 | -8.615850e-47 |
| Msa0557680 | Msa0903730 | 0.814846 | 1.250998e-51 | -8.615850e-47 |
| Msa0557680 | Msa0921630 | 0.839191 | 1.836182e-57 | -8.615850e-47 |
| Msa0557680 | Msa0936270 | 0.805647 | 1.206984e-49 | -8.615850e-47 |
| Msa0557680 | Msa0946120 | 0.843228 | 1.594517e-58 | -8.615850e-47 |
| Msa0557680 | Msa0951720 | 0.860491 | 1.990001e-63 | -8.615850e-47 |
| Msa0557680 | Msa0952990 | 0.800093 | 1.694239e-48 | -8.615850e-47 |
| Msa0557680 | Msa0960270 | 0.801101 | 1.055495e-48 | -8.615850e-47 |
| Msa0557680 | Msa0961420 | -0.840734 | 7.274512e-58 | -8.615850e-47 |
| Msa0557680 | Msa0965520 | 0.825599 | 4.293293e-54 | -8.615850e-47 |
| Msa0557680 | Msa0968320 | -0.809954 | 1.465724e-50 | -8.615850e-47 |
| Msa0557680 | Msa0970050 | 0.803656 | 3.141476e-49 | -8.615850e-47 |
| Msa0557680 | Msa0980440 | 0.809744 | 1.626254e-50 | -8.615850e-47 |
| Msa0557680 | Msa0981010 | 0.851000 | 1.180115e-60 | -8.615850e-47 |
| Msa0557680 | Msa0988500 | 0.826313 | 2.905521e-54 | -8.615850e-47 |
| Msa0557680 | Msa0988510 | 0.808331 | 3.263385e-50 | -8.615850e-47 |
| Msa0557680 | Msa1000020 | 0.820783 | 5.713847e-53 | -8.615850e-47 |
| Msa0557680 | Msa1004210 | 0.808658 | 2.780163e-50 | -8.615850e-47 |
| Msa0557680 | Msa1008340 | 0.811836 | 5.735338e-51 | -8.615850e-47 |
| Msa0557680 | Msa1008490 | 0.862494 | 4.872405e-64 | -8.615850e-47 |
| Msa0557680 | Msa1009000 | 0.831282 | 1.822972e-55 | -8.615850e-47 |
| Msa0557680 | Msa1009020 | 0.826032 | 3.389451e-54 | -8.615850e-47 |
| Msa0557680 | Msa1018020 | -0.809156 | 2.174416e-50 | -8.615850e-47 |
| Msa0557680 | Msa1018720 | 0.821631 | 3.642734e-53 | -8.615850e-47 |
| Msa0557680 | Msa1021770 | 0.821282 | 4.387398e-53 | -8.615850e-47 |
| Msa0557680 | Msa1036350 | 0.818556 | 1.842948e-52 | -8.615850e-47 |
| Msa0557680 | Msa1036390 | 0.859480 | 4.018398e-63 | -8.615850e-47 |
| Msa0557680 | Msa1040120 | 0.834199 | 3.441863e-56 | -8.615850e-47 |
| Msa0557680 | Msa1044090 | 0.845430 | 4.081947e-59 | -8.615850e-47 |
| Msa0557680 | Msa1046610 | 0.822683 | 2.077927e-53 | -8.615850e-47 |
| Msa0557680 | Msa1049950 | 0.829406 | 5.241687e-55 | -8.615850e-47 |
| Msa0557680 | Msa1055280 | 0.809067 | 2.272857e-50 | -8.615850e-47 |
| Msa0557680 | Msa1069100 | 0.806460 | 8.138576e-50 | -8.615850e-47 |
| Msa0557680 | Msa1072350 | 0.820273 | 7.481555e-53 | -8.615850e-47 |
| Msa0557680 | Msa1076480 | 0.800178 | 1.628133e-48 | -8.615850e-47 |
| Msa0557680 | Msa1076630 | 0.837002 | 6.721707e-57 | -8.615850e-47 |
| Msa0557680 | Msa1076680 | 0.853933 | 1.722053e-61 | -8.615850e-47 |
| Msa0557680 | Msa1080460 | 0.806290 | 8.836467e-50 | -8.615850e-47 |
| Msa0557680 | Msa1081600 | 0.823083 | 1.676650e-53 | -8.615850e-47 |
| Msa0557680 | Msa1083410 | 0.845309 | 4.401055e-59 | -8.615850e-47 |
| Msa0557680 | Msa1095800 | -0.807643 | 4.573478e-50 | -8.615850e-47 |
| Msa0557680 | Msa1098560 | 0.855628 | 5.553970e-62 | -8.615850e-47 |
| Msa0557680 | Msa1099030 | 0.807309 | 5.383744e-50 | -8.615850e-47 |
| Msa0557680 | Msa1118140 | 0.825881 | 3.680976e-54 | -8.615850e-47 |
| Msa0557680 | Msa1122660 | 0.808433 | 3.104796e-50 | -8.615850e-47 |
| Msa0557680 | Msa1124680 | -0.810157 | 1.325209e-50 | -8.615850e-47 |
| Msa0557680 | Msa1125040 | 0.822960 | 1.790655e-53 | -8.615850e-47 |
| Msa0557680 | Msa1128160 | 0.836721 | 7.926795e-57 | -8.615850e-47 |
| Msa0557680 | Msa1133660 | 0.842524 | 2.454062e-58 | -8.615850e-47 |
| Msa0557680 | Msa1139240 | 0.828214 | 1.018233e-54 | -8.615850e-47 |
| Msa0557680 | Msa1140010 | 0.813543 | 2.426453e-51 | -8.615850e-47 |
| Msa0557680 | Msa1151960 | 0.806676 | 7.329187e-50 | -8.615850e-47 |
| Msa0557680 | Msa1165360 | 0.836769 | 7.706023e-57 | -8.615850e-47 |
| Msa0557680 | Msa1166370 | 0.827517 | 1.497377e-54 | -8.615850e-47 |
| Msa0557680 | Msa1168680 | -0.803038 | 4.219157e-49 | -8.615850e-47 |
| Msa0557680 | Msa1170040 | -0.803281 | 3.757810e-49 | -8.615850e-47 |
| Msa0557680 | Msa1182830 | 0.801098 | 1.056831e-48 | -8.615850e-47 |
| Msa0557680 | Msa1188420 | 0.818997 | 1.463550e-52 | -8.615850e-47 |
| Msa0557680 | Msa1201990 | 0.800286 | 1.547562e-48 | -8.615850e-47 |
| Msa0557680 | Msa1204980 | -0.856423 | 3.250584e-62 | -8.615850e-47 |
| Msa0557680 | Msa1205010 | -0.855321 | 6.822066e-62 | -8.615850e-47 |
| Msa0557680 | Msa1207480 | -0.839720 | 1.338241e-57 | -8.615850e-47 |
| Msa0557680 | Msa1214270 | 0.801370 | 9.296196e-49 | -8.615850e-47 |
| Msa0557680 | Msa1217900 | -0.806502 | 7.972602e-50 | -8.615850e-47 |
| Msa0557680 | Msa1220230 | 0.830644 | 2.614756e-55 | -8.615850e-47 |
| Msa0557680 | Msa1221200 | -0.841347 | 5.022248e-58 | -8.615850e-47 |
| Msa0557680 | Msa1221570 | -0.817726 | 2.839460e-52 | -8.615850e-47 |
| Msa0557680 | Msa1223460 | 0.851517 | 8.426983e-61 | -8.615850e-47 |
| Msa0557680 | Msa1224400 | 0.801119 | 1.046608e-48 | -8.615850e-47 |
| Msa0557680 | Msa1228210 | 0.842647 | 2.275672e-58 | -8.615850e-47 |
| Msa0557680 | Msa1242390 | 0.809031 | 2.313717e-50 | -8.615850e-47 |
| Msa0557680 | Msa1254770 | 0.807076 | 6.030850e-50 | -8.615850e-47 |
| Msa0557680 | Msa1254800 | 0.804634 | 1.966136e-49 | -8.615850e-47 |
| Msa0557680 | Msa1254950 | 0.827266 | 1.720071e-54 | -8.615850e-47 |
| Msa0557680 | Msa1256540 | -0.861588 | 9.230263e-64 | -8.615850e-47 |
| Msa0557680 | Msa1257870 | -0.801239 | 9.891409e-49 | -8.615850e-47 |
| Msa0557680 | Msa1258280 | 0.812807 | 3.519975e-51 | -8.615850e-47 |
| Msa0557680 | Msa1261470 | 0.809206 | 2.121420e-50 | -8.615850e-47 |
| Msa0557680 | Msa1263660 | 0.820709 | 5.944969e-53 | -8.615850e-47 |
| Msa0557680 | Msa1265960 | 0.833631 | 4.774315e-56 | -8.615850e-47 |
| Msa0557680 | Msa1271280 | 0.869090 | 4.017073e-66 | -8.615850e-47 |
| Msa0557680 | Msa1271300 | 0.842151 | 3.081240e-58 | -8.615850e-47 |
| Msa0557680 | Msa1272070 | 0.807833 | 4.167674e-50 | -8.615850e-47 |
| Msa0557680 | Msa1280120 | 0.805331 | 1.405777e-49 | -8.615850e-47 |
| Msa0557680 | Msa1284140 | 0.808887 | 2.483484e-50 | -8.615850e-47 |
| Msa0557680 | Msa1287160 | 0.804716 | 1.890204e-49 | -8.615850e-47 |
| Msa0557680 | Msa1295690 | 0.826985 | 2.008769e-54 | -8.615850e-47 |
| Msa0557680 | Msa1296960 | -0.863970 | 1.701309e-64 | -8.615850e-47 |
| Msa0557680 | Msa1298290 | 0.809390 | 1.937498e-50 | -8.615850e-47 |
| Msa0557680 | Msa1304180 | 0.808176 | 3.521799e-50 | -8.615850e-47 |
| Msa0557680 | Msa1323160 | -0.804199 | 2.422379e-49 | -8.615850e-47 |
| Msa0557680 | Msa1323190 | 0.802336 | 5.886949e-49 | -8.615850e-47 |
| Msa0557680 | Msa1326000 | 0.809569 | 1.773625e-50 | -8.615850e-47 |
| Msa0557680 | Msa1329990 | 0.812651 | 3.808376e-51 | -8.615850e-47 |
| Msa0557680 | Msa1335770 | 0.818577 | 1.822535e-52 | -8.615850e-47 |
| Msa0557680 | Msa1335860 | 0.801604 | 8.326066e-49 | -8.615850e-47 |
| Msa0557680 | Msa1335970 | -0.810631 | 1.047018e-50 | -8.615850e-47 |
| Msa0557680 | Msa1336470 | 0.803462 | 3.445863e-49 | -8.615850e-47 |
| Msa0557680 | Msa1337190 | 0.817988 | 2.477466e-52 | -8.615850e-47 |
| Msa0557680 | Msa1342430 | 0.906063 | 2.213310e-80 | -8.615850e-47 |
| Msa0557680 | Msa1347290 | 0.811613 | 6.413912e-51 | -8.615850e-47 |
| Msa0557680 | Msa1350840 | 0.822739 | 2.016452e-53 | -8.615850e-47 |
| Msa0557680 | Msa1353530 | 0.812317 | 4.504454e-51 | -8.615850e-47 |
| Msa0557680 | Msa1355260 | 0.818633 | 1.770035e-52 | -8.615850e-47 |
| Msa0557680 | Msa1357170 | 0.800566 | 1.357501e-48 | -8.615850e-47 |
| Msa0557680 | Msa1358870 | -0.829729 | 4.374749e-55 | -8.615850e-47 |
| Msa0557680 | Msa1369700 | 0.828356 | 9.406765e-55 | -8.615850e-47 |
| Msa0557680 | Msa1371080 | -0.827573 | 1.451795e-54 | -8.615850e-47 |
| Msa0557680 | Msa1373910 | 0.812471 | 4.169359e-51 | -8.615850e-47 |
| Msa0557680 | Msa1373950 | 0.849867 | 2.455088e-60 | -8.615850e-47 |
| Msa0557680 | Msa1385900 | 0.800975 | 1.119628e-48 | -8.615850e-47 |
| Msa0557680 | Msa1386520 | 0.802193 | 6.300416e-49 | -8.615850e-47 |
| Msa0557680 | Msa1395570 | 0.803052 | 4.190499e-49 | -8.615850e-47 |
| Msa0557680 | Msa1397540 | 0.802042 | 6.769196e-49 | -8.615850e-47 |
| Msa0557680 | Msa1405180 | 0.804015 | 2.645768e-49 | -8.615850e-47 |
| Msa0557680 | Msa1411070 | 0.808986 | 2.364712e-50 | -8.615850e-47 |
| Msa0557680 | Msa1423080 | 0.814860 | 1.242248e-51 | -8.615850e-47 |
| Msa0557680 | Msa1428420 | 0.817122 | 3.883834e-52 | -8.615850e-47 |
| Msa0557680 | Msa1431000 | 0.835422 | 1.693521e-56 | -8.615850e-47 |
| Msa0557680 | Msa1437190 | 0.824203 | 9.164050e-54 | -8.615850e-47 |
| Msa0557680 | Msa1438270 | 0.837071 | 6.452759e-57 | -8.615850e-47 |
| Msa0557680 | Msa1447440 | 0.823131 | 1.633440e-53 | -8.615850e-47 |
| Msa0557680 | Msa1450020 | 0.806741 | 7.098208e-50 | -8.615850e-47 |
| Msa0557680 | Msa1454290 | -0.823424 | 1.395454e-53 | -8.615850e-47 |
| Msa0557680 | Msa1456810 | 0.817861 | 2.647313e-52 | -8.615850e-47 |
| Msa0557680 | Msa1460310 | -0.829791 | 4.225239e-55 | -8.615850e-47 |
| Msa0557680 | Msa1460380 | 0.835887 | 1.291749e-56 | -8.615850e-47 |
| Msa0557680 | Msa1460890 | 0.821182 | 4.626728e-53 | -8.615850e-47 |
| Msa0557680 | Msa1464560 | 0.819486 | 1.132552e-52 | -8.615850e-47 |
| Msa0557680 | Msa1465900 | 0.826217 | 3.062532e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0557680 | MtrunA17_Chr4g0046991 | 97.222 | 144 | 3 | 1 | 1 | 143 | 11 | 154 | 3.16e-99 | 281 |
| Msa0557680 | MtrunA17_Chr2g0282521 | 72.477 | 109 | 27 | 2 | 33 | 140 | 36 | 142 | 1.18e-49 | 155 |
| Msa0557680 | MtrunA17_Chr8g0360361 | 71.765 | 85 | 24 | 0 | 59 | 143 | 62 | 146 | 2.03e-42 | 138 |
| Msa0557680 | MtrunA17_Chr7g0231911 | 74.074 | 81 | 21 | 0 | 62 | 142 | 149 | 229 | 7.69e-38 | 130 |
| Msa0557680 | MtrunA17_Chr8g0334671 | 59.821 | 112 | 38 | 2 | 27 | 136 | 155 | 261 | 7.57e-37 | 128 |
| Msa0557680 | MtrunA17_Chr7g0258471 | 72.727 | 77 | 21 | 0 | 59 | 135 | 139 | 215 | 3.85e-36 | 128 |
| Msa0557680 | MtrunA17_Chr5g0420051 | 60.000 | 95 | 35 | 1 | 50 | 141 | 166 | 260 | 5.72e-36 | 128 |
| Msa0557680 | MtrunA17_Chr2g0302791 | 59.794 | 97 | 35 | 1 | 47 | 139 | 120 | 216 | 5.95e-34 | 125 |
| Msa0557680 | MtrunA17_Chr4g0061651 | 72.973 | 74 | 20 | 0 | 62 | 135 | 123 | 196 | 8.84e-34 | 122 |
| Msa0557680 | MtrunA17_Chr3g0122411 | 68.421 | 76 | 24 | 0 | 60 | 135 | 163 | 238 | 1.36e-33 | 122 |
| Msa0557680 | MtrunA17_Chr7g0224821 | 60.674 | 89 | 33 | 1 | 47 | 135 | 64 | 150 | 9.42e-33 | 118 |
| Msa0557680 | MtrunA17_Chr3g0132091 | 56.436 | 101 | 40 | 1 | 39 | 135 | 46 | 146 | 2.12e-32 | 117 |
| Msa0557680 | MtrunA17_Chr2g0308321 | 67.532 | 77 | 25 | 0 | 62 | 138 | 171 | 247 | 4.47e-32 | 119 |
| Msa0557680 | MtrunA17_Chr1g0194121 | 62.921 | 89 | 33 | 0 | 48 | 136 | 133 | 221 | 4.78e-32 | 119 |
| Msa0557680 | MtrunA17_Chr1g0162871 | 68.750 | 80 | 25 | 0 | 60 | 139 | 102 | 181 | 5.32e-32 | 119 |
| Msa0557680 | MtrunA17_Chr7g0270541 | 63.333 | 90 | 33 | 0 | 47 | 136 | 130 | 219 | 7.32e-32 | 119 |
| Msa0557680 | MtrunA17_Chr8g0377421 | 53.043 | 115 | 46 | 2 | 29 | 135 | 91 | 205 | 3.16e-30 | 110 |
| Msa0557680 | MtrunA17_Chr8g0377401 | 64.474 | 76 | 27 | 0 | 59 | 134 | 159 | 234 | 1.41e-29 | 107 |
| Msa0557680 | MtrunA17_Chr8g0386271 | 67.568 | 74 | 24 | 0 | 62 | 135 | 99 | 172 | 2.40e-29 | 109 |
| Msa0557680 | MtrunA17_Chr2g0286661 | 56.410 | 78 | 34 | 0 | 62 | 139 | 103 | 180 | 3.72e-24 | 97.1 |
| Msa0557680 | MtrunA17_Chr2g0317041 | 67.347 | 49 | 16 | 0 | 60 | 108 | 97 | 145 | 1.44e-19 | 79.3 |
| Msa0557680 | MtrunA17_Chr1g0175031 | 64.151 | 53 | 19 | 0 | 56 | 108 | 68 | 120 | 1.02e-18 | 76.6 |
| Msa0557680 | MtrunA17_Chr8g0377431 | 55.357 | 56 | 25 | 0 | 60 | 115 | 149 | 204 | 2.71e-15 | 69.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0557680 | AT2G33810.1 | 69.792 | 96 | 26 | 1 | 44 | 139 | 39 | 131 | 8.47e-44 | 140 |
| Msa0557680 | AT1G53160.2 | 67.391 | 92 | 27 | 1 | 46 | 137 | 41 | 129 | 3.08e-38 | 128 |
| Msa0557680 | AT1G53160.1 | 67.391 | 92 | 27 | 1 | 46 | 137 | 41 | 129 | 3.08e-38 | 128 |
| Msa0557680 | AT1G53160.3 | 67.391 | 92 | 27 | 1 | 46 | 137 | 41 | 129 | 3.33e-38 | 127 |
| Msa0557680 | AT3G15270.1 | 69.512 | 82 | 25 | 0 | 62 | 143 | 63 | 144 | 7.63e-37 | 124 |
| Msa0557680 | AT1G69170.1 | 64.894 | 94 | 30 | 1 | 50 | 140 | 109 | 202 | 1.91e-36 | 129 |
| Msa0557680 | AT3G60030.1 | 61.458 | 96 | 37 | 0 | 47 | 142 | 112 | 207 | 3.56e-35 | 129 |
| Msa0557680 | AT1G02065.1 | 62.245 | 98 | 35 | 1 | 40 | 135 | 164 | 261 | 1.13e-34 | 123 |
| Msa0557680 | AT2G47070.1 | 72.368 | 76 | 21 | 0 | 61 | 136 | 105 | 180 | 3.91e-34 | 125 |
| Msa0557680 | AT1G27360.2 | 56.701 | 97 | 42 | 0 | 39 | 135 | 152 | 248 | 6.72e-33 | 119 |
| Msa0557680 | AT1G27360.1 | 56.701 | 97 | 42 | 0 | 39 | 135 | 152 | 248 | 6.72e-33 | 119 |
| Msa0557680 | AT1G27360.3 | 56.701 | 97 | 42 | 0 | 39 | 135 | 152 | 248 | 6.72e-33 | 119 |
| Msa0557680 | AT1G27360.4 | 56.701 | 97 | 42 | 0 | 39 | 135 | 152 | 248 | 6.72e-33 | 119 |
| Msa0557680 | AT5G43270.3 | 53.982 | 113 | 47 | 1 | 28 | 135 | 130 | 242 | 7.56e-33 | 120 |
| Msa0557680 | AT5G43270.1 | 53.982 | 113 | 47 | 1 | 28 | 135 | 130 | 242 | 7.56e-33 | 120 |
| Msa0557680 | AT5G43270.2 | 53.982 | 113 | 47 | 1 | 28 | 135 | 130 | 242 | 7.56e-33 | 120 |
| Msa0557680 | AT1G27370.6 | 53.125 | 96 | 45 | 0 | 40 | 135 | 154 | 249 | 1.21e-32 | 118 |
| Msa0557680 | AT1G20980.1 | 71.429 | 77 | 22 | 0 | 60 | 136 | 118 | 194 | 1.30e-32 | 121 |
| Msa0557680 | AT1G27370.1 | 53.125 | 96 | 45 | 0 | 40 | 135 | 154 | 249 | 4.04e-32 | 117 |
| Msa0557680 | AT1G27370.5 | 53.125 | 96 | 45 | 0 | 40 | 135 | 154 | 249 | 4.04e-32 | 117 |
| Msa0557680 | AT1G27370.3 | 53.125 | 96 | 45 | 0 | 40 | 135 | 154 | 249 | 4.04e-32 | 117 |
| Msa0557680 | AT1G27370.2 | 53.125 | 96 | 45 | 0 | 40 | 135 | 154 | 249 | 4.04e-32 | 117 |
| Msa0557680 | AT1G27370.4 | 53.125 | 96 | 45 | 0 | 40 | 135 | 154 | 249 | 4.04e-32 | 117 |
| Msa0557680 | AT1G27370.7 | 53.125 | 96 | 45 | 0 | 40 | 135 | 154 | 249 | 4.04e-32 | 117 |
| Msa0557680 | AT2G42200.1 | 68.421 | 76 | 24 | 0 | 60 | 135 | 72 | 147 | 4.07e-32 | 117 |
| Msa0557680 | AT5G50570.1 | 58.621 | 87 | 36 | 0 | 56 | 142 | 95 | 181 | 8.14e-32 | 116 |
| Msa0557680 | AT5G50570.2 | 58.621 | 87 | 36 | 0 | 56 | 142 | 95 | 181 | 8.14e-32 | 116 |
| Msa0557680 | AT5G50670.1 | 58.621 | 87 | 36 | 0 | 56 | 142 | 95 | 181 | 8.14e-32 | 116 |
| Msa0557680 | AT5G50670.2 | 58.621 | 87 | 36 | 0 | 56 | 142 | 95 | 181 | 8.14e-32 | 116 |
| Msa0557680 | AT1G76580.1 | 68.750 | 80 | 25 | 0 | 60 | 139 | 112 | 191 | 3.81e-31 | 117 |
| Msa0557680 | AT1G76580.2 | 68.750 | 80 | 25 | 0 | 60 | 139 | 112 | 191 | 4.38e-31 | 117 |
| Msa0557680 | AT1G76580.3 | 68.750 | 80 | 25 | 0 | 60 | 139 | 112 | 191 | 4.72e-31 | 117 |
| Msa0557680 | AT3G57920.1 | 70.270 | 74 | 22 | 0 | 62 | 135 | 59 | 132 | 1.46e-29 | 110 |
| Msa0557680 | AT5G18830.3 | 51.852 | 81 | 39 | 0 | 62 | 142 | 138 | 218 | 6.87e-23 | 93.6 |
| Msa0557680 | AT5G18830.2 | 51.852 | 81 | 39 | 0 | 62 | 142 | 138 | 218 | 7.03e-23 | 93.6 |
| Msa0557680 | AT5G18830.1 | 51.852 | 81 | 39 | 0 | 62 | 142 | 138 | 218 | 7.55e-23 | 93.6 |
| Msa0557680 | AT1G02065.2 | 56.944 | 72 | 29 | 1 | 40 | 109 | 164 | 235 | 3.59e-20 | 83.6 |
| Msa0557680 | AT2G47070.2 | 70.000 | 50 | 15 | 0 | 87 | 136 | 2 | 51 | 1.94e-18 | 80.9 |
Find 53 sgRNAs with CRISPR-Local
Find 284 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATGATTTCAGACATTAATA+AGG | 0.329665 | 4_1:-56140275 | Msa0557680:exon |
| AAGAGGAAGAGGATGGTAGA+AGG | 0.346008 | 4_1:-56144320 | Msa0557680:CDS |
| TCGTATGTTGCTGGTCTCTA+AGG | 0.358783 | 4_1:-56140217 | Msa0557680:three_prime_UTR |
| GACAGAAGATAGAGAGCATT+TGG | 0.369635 | 4_1:+56140189 | None:intergenic |
| GCTAGTTCACGACAAAGAAA+TGG | 0.384455 | 4_1:-56144627 | Msa0557680:five_prime_UTR |
| TGAGGAGGAAGAAGAGGAAG+AGG | 0.391649 | 4_1:-56144355 | Msa0557680:CDS |
| GCACCTGCCGTACACATTAC+AGG | 0.392224 | 4_1:-56144141 | Msa0557680:CDS |
| TCAAGCCCTTCGTATGTTGC+TGG | 0.396432 | 4_1:-56140226 | Msa0557680:three_prime_UTR |
| AAGAAGTTGCAGAAGGCGTT+TGG | 0.399194 | 4_1:-56140346 | Msa0557680:CDS |
| CTCCATAGTTTCAAGGGAAA+AGG | 0.413422 | 4_1:+56144425 | None:intergenic |
| TTCTTGTCTCCATAGTTTCA+AGG | 0.435006 | 4_1:+56144418 | None:intergenic |
| GGAAGAAGAGGAAGAGGATA+CGG | 0.438830 | 4_1:-56144349 | Msa0557680:CDS |
| AGTTGCAGAAGGCGTTTGGC+TGG | 0.439917 | 4_1:-56140342 | Msa0557680:CDS |
| ATAGTGTGAGAGAATGTATT+AGG | 0.447100 | 4_1:+56144583 | None:intergenic |
| AAGAGGATGGTAGAAGGAAG+AGG | 0.452598 | 4_1:-56144314 | Msa0557680:CDS |
| CTAGTTCACGACAAAGAAAT+GGG | 0.478019 | 4_1:-56144626 | Msa0557680:five_prime_UTR |
| GCAATATCACCGGAGACATA+AGG | 0.487344 | 4_1:-56144184 | Msa0557680:CDS |
| CATGGTTGAAACAAAATCTC+AGG | 0.492267 | 4_1:-56140250 | Msa0557680:three_prime_UTR |
| GGATCATGAGGAGGAAGAAG+AGG | 0.499097 | 4_1:-56144361 | Msa0557680:CDS |
| AGAGGATGGTAGAAGGAAGA+GGG | 0.504666 | 4_1:-56144313 | Msa0557680:CDS |
| AAACTCAAACTATTCATATG+AGG | 0.504948 | 4_1:+56144493 | None:intergenic |
| AATGTGTACGGCAGGTGCTT+TGG | 0.505419 | 4_1:+56144146 | None:intergenic |
| AAAAGTGCAATTGACTATCA+AGG | 0.509871 | 4_1:-56140300 | Msa0557680:CDS |
| ACATTACAGGATTGCAGCAA+AGG | 0.512816 | 4_1:-56144128 | Msa0557680:CDS |
| TCTTGTCTCCATAGTTTCAA+GGG | 0.513672 | 4_1:+56144419 | None:intergenic |
| TATTCCACCTTGTTGTCAAG+TGG | 0.526109 | 4_1:-56144238 | Msa0557680:CDS |
| CATCAAATTCAGATAGTCCA+TGG | 0.531989 | 4_1:+56140376 | None:intergenic |
| GTTGCAGAAGGCGTTTGGCT+GGG | 0.534230 | 4_1:-56140341 | Msa0557680:CDS |
| TATTAGGACCACAAGTGGTA+TGG | 0.547240 | 4_1:+56144599 | None:intergenic |
| ACTCACAGACCTTATGTCTC+CGG | 0.562455 | 4_1:+56144175 | None:intergenic |
| CAATTCTCCACTTGACAACA+AGG | 0.571704 | 4_1:+56144231 | None:intergenic |
| CTTTGTCGTGAACTAGCTAG+AGG | 0.574215 | 4_1:+56144633 | None:intergenic |
| GTTTGGCTGGGCATAATGAG+AGG | 0.579938 | 4_1:-56140329 | Msa0557680:CDS |
| TTGAAACTATGGAGACAAGA+AGG | 0.594631 | 4_1:-56144416 | Msa0557680:exon |
| AATAAGTTTGAAGTACAAAG+AGG | 0.596272 | 4_1:-56144382 | Msa0557680:CDS |
| CTCAAACTATTCATATGAGG+AGG | 0.599476 | 4_1:+56144496 | None:intergenic |
| CTGCAATCCTGTAATGTGTA+CGG | 0.600361 | 4_1:+56144134 | None:intergenic |
| ATTACTTTCTCCGAAATCCG+AGG | 0.610386 | 4_1:-56140017 | Msa0557680:three_prime_UTR |
| TGGGAAGACCATACCACTTG+TGG | 0.611800 | 4_1:-56144607 | Msa0557680:five_prime_UTR |
| ATGGAGACAAGAAGGTCAGA+GGG | 0.623380 | 4_1:-56144408 | Msa0557680:CDS |
| TTACTTTCTCCGAAATCCGA+GGG | 0.623617 | 4_1:-56140016 | Msa0557680:three_prime_UTR |
| TCAGACATTAATAAGGAACA+TGG | 0.626154 | 4_1:-56140268 | Msa0557680:three_prime_UTR |
| TTTGTCGTGAACTAGCTAGA+GGG | 0.626926 | 4_1:+56144634 | None:intergenic |
| AATCCTGTAATGTGTACGGC+AGG | 0.629458 | 4_1:+56144138 | None:intergenic |
| GTGAAGCTAAGCAATATCAC+CGG | 0.630226 | 4_1:-56144194 | Msa0557680:CDS |
| GTCAGAGAGATCTAGAAACA+AGG | 0.633465 | 4_1:+56144447 | None:intergenic |
| TATGGAGACAAGAAGGTCAG+AGG | 0.634836 | 4_1:-56144409 | Msa0557680:CDS |
| GTACAAAGAGGATCATGAGG+AGG | 0.636625 | 4_1:-56144370 | Msa0557680:CDS |
| GAATGTATTAGGACCACAAG+TGG | 0.642461 | 4_1:+56144594 | None:intergenic |
| GAAGTACAAAGAGGATCATG+AGG | 0.643502 | 4_1:-56144373 | Msa0557680:CDS |
| TAGAGACCAGCAACATACGA+AGG | 0.660132 | 4_1:+56140220 | None:intergenic |
| AGAGACCAGCAACATACGAA+GGG | 0.664972 | 4_1:+56140221 | None:intergenic |
| TTCTCCACTTGACAACAAGG+TGG | 0.724295 | 4_1:+56144234 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTTTAATATTAAAAAA+AGG | - | chr4_1:56142078-56142097 | Msa0557680:intron | 0.0% |
| !!! | TATATATAAGAATAGTTTTA+TGG | - | chr4_1:56140093-56140112 | Msa0557680:three_prime_UTR | 10.0% |
| !!! | AAATATTTAATTAGTTGATA+TGG | + | chr4_1:56141889-56141908 | None:intergenic | 10.0% |
| !! | ATTAAAAAAATTGTGTATAA+GGG | + | chr4_1:56142069-56142088 | None:intergenic | 10.0% |
| !! | TATTAAAAAAATTGTGTATA+AGG | + | chr4_1:56142070-56142089 | None:intergenic | 10.0% |
| !!! | AAAAATAGTAACTTTTATAT+TGG | - | chr4_1:56142356-56142375 | Msa0557680:intron | 10.0% |
| !! | ATTTACACTAAAAATATAAT+GGG | + | chr4_1:56142502-56142521 | None:intergenic | 10.0% |
| !! | AATTTACACTAAAAATATAA+TGG | + | chr4_1:56142503-56142522 | None:intergenic | 10.0% |
| !!! | AATTATAAATTTTTTGCATT+AGG | + | chr4_1:56142765-56142784 | None:intergenic | 10.0% |
| !!! | AATTATAGTTTTAATAATAG+TGG | - | chr4_1:56142794-56142813 | Msa0557680:intron | 10.0% |
| !!! | ATATGTATTATTTTTTTGTT+GGG | + | chr4_1:56143723-56143742 | None:intergenic | 10.0% |
| !!! | TATATGTATTATTTTTTTGT+TGG | + | chr4_1:56143724-56143743 | None:intergenic | 10.0% |
| !! | AATTTACTTAAAAGAGATTA+GGG | + | chr4_1:56140553-56140572 | None:intergenic | 15.0% |
| !! | AAATTTACTTAAAAGAGATT+AGG | + | chr4_1:56140554-56140573 | None:intergenic | 15.0% |
| !! | TAACAAAATATATATGTACT+TGG | + | chr4_1:56140975-56140994 | None:intergenic | 15.0% |
| !!! | TATTTCCATAATTTTTCTTT+TGG | - | chr4_1:56140996-56141015 | Msa0557680:intron | 15.0% |
| !! | AAAATCCAAAAGAAAAATTA+TGG | + | chr4_1:56141004-56141023 | None:intergenic | 15.0% |
| !!! | CAAATTTTTTTTTTTTTGTC+AGG | - | chr4_1:56141255-56141274 | Msa0557680:intron | 15.0% |
| !! | ACTTTATAATATGAATAAGT+AGG | - | chr4_1:56141298-56141317 | Msa0557680:intron | 15.0% |
| !! | CTTTATAATATGAATAAGTA+GGG | - | chr4_1:56141299-56141318 | Msa0557680:intron | 15.0% |
| !!! | ATGAAAATTTTGATATGTAA+CGG | - | chr4_1:56141433-56141452 | Msa0557680:intron | 15.0% |
| !! | ATTTGATCATTAATCAATTA+AGG | - | chr4_1:56141950-56141969 | Msa0557680:intron | 15.0% |
| !! | TTATTATGATATCATTATGT+GGG | + | chr4_1:56142021-56142040 | None:intergenic | 15.0% |
| !! | TTTATTATGATATCATTATG+TGG | + | chr4_1:56142022-56142041 | None:intergenic | 15.0% |
| !! | TAATGAGTATTAGAAAAAAA+CGG | - | chr4_1:56142181-56142200 | Msa0557680:intron | 15.0% |
| !! | TATCATAAGGATATTATTTA+AGG | + | chr4_1:56142466-56142485 | None:intergenic | 15.0% |
| !! | AATAAAAAATCAGCAAAAAT+GGG | + | chr4_1:56142603-56142622 | None:intergenic | 15.0% |
| !! | AAATAAAAAATCAGCAAAAA+TGG | + | chr4_1:56142604-56142623 | None:intergenic | 15.0% |
| !!! | TGAATTTCTGTTATTATTTT+TGG | - | chr4_1:56142698-56142717 | Msa0557680:intron | 15.0% |
| !!! | AATTATAAACACTATTTTTG+TGG | - | chr4_1:56143194-56143213 | Msa0557680:intron | 15.0% |
| !!! | TTTTTTAACAAAGAAAAATG+TGG | + | chr4_1:56143353-56143372 | None:intergenic | 15.0% |
| !!! | TGACAAATGTTTTTTTTTTT+TGG | + | chr4_1:56143407-56143426 | None:intergenic | 15.0% |
| !!! | GACAAATGTTTTTTTTTTTT+TGG | + | chr4_1:56143406-56143425 | None:intergenic | 15.0% |
| !! | TTGTAAAAATAAAAATATCC+TGG | - | chr4_1:56143803-56143822 | Msa0557680:intron | 15.0% |
| !!! | ATTTGTTATTCAAAAAAAGA+CGG | + | chr4_1:56143906-56143925 | None:intergenic | 15.0% |
| !!! | ACTTTTGTCTAAAAAAATCA+GGG | - | chr4_1:56140669-56140688 | Msa0557680:intron | 20.0% |
| !! | ATGAAAATTGTATCACTATT+TGG | + | chr4_1:56140729-56140748 | None:intergenic | 20.0% |
| !!! | TTTTATATTGGATGATCATT+AGG | - | chr4_1:56141812-56141831 | Msa0557680:intron | 20.0% |
| !! | ATTTCTCATTATTCCATTAA+TGG | - | chr4_1:56141835-56141854 | Msa0557680:intron | 20.0% |
| !! | TTTCTCATTATTCCATTAAT+GGG | - | chr4_1:56141836-56141855 | Msa0557680:intron | 20.0% |
| !! | AATGAGTATTAGAAAAAAAC+GGG | - | chr4_1:56142182-56142201 | Msa0557680:intron | 20.0% |
| !! | TTAGTGAGTAAAATTAGAAA+TGG | + | chr4_1:56142285-56142304 | None:intergenic | 20.0% |
| !!! | AGACAAAATTTCTTTTTTGT+AGG | - | chr4_1:56142424-56142443 | Msa0557680:intron | 20.0% |
| !! | GGATAGTAACAAAAAAAAAA+GGG | - | chr4_1:56143462-56143481 | Msa0557680:intron | 20.0% |
| !! | GATAGTAACAAAAAAAAAAG+GGG | - | chr4_1:56143463-56143482 | Msa0557680:intron | 20.0% |
| !! | ATAGTAACAAAAAAAAAAGG+GGG | - | chr4_1:56143464-56143483 | Msa0557680:intron | 20.0% |
| !! | GGATAGTAACAAAAAAAAAA+GGG | - | chr4_1:56143462-56143481 | Msa0557680:intron | 20.0% |
| !! | GATAGTAACAAAAAAAAAAG+GGG | - | chr4_1:56143463-56143482 | Msa0557680:intron | 20.0% |
| !! | ATAGTAACAAAAAAAAAAGG+GGG | - | chr4_1:56143464-56143483 | Msa0557680:intron | 20.0% |
| !!! | TTTTTTTGTTGGGATTAAAT+TGG | + | chr4_1:56143713-56143732 | None:intergenic | 20.0% |
| !!! | AGAAAGATTAATTTTTTGTC+AGG | + | chr4_1:56143754-56143773 | None:intergenic | 20.0% |
| !!! | TTGATTTTTTCTTTTTCAGT+TGG | - | chr4_1:56143832-56143851 | Msa0557680:intron | 20.0% |
| !!! | AATTTTTTCATGACCTAATT+TGG | + | chr4_1:56143861-56143880 | None:intergenic | 20.0% |
| !!! | TTTGTTATTCAAAAAAAGAC+GGG | + | chr4_1:56143905-56143924 | None:intergenic | 20.0% |
| !!! | CTTTTTCGTTAAACAATATA+GGG | - | chr4_1:56144003-56144022 | Msa0557680:intron | 20.0% |
| !! | ATCATTCGATATTAATTAGA+CGG | + | chr4_1:56144029-56144048 | None:intergenic | 20.0% |
| !!! | TTAACTTTTTCCACTAATAT+GGG | + | chr4_1:56144162-56144181 | None:intergenic | 20.0% |
| !! | AATGATTTCAGACATTAATA+AGG | - | chr4_1:56144346-56144365 | Msa0557680:CDS | 20.0% |
| ! | AAACTCAAACTATTCATATG+AGG | + | chr4_1:56140131-56140150 | None:intergenic | 25.0% |
| !! | AATAAGTTTGAAGTACAAAG+AGG | - | chr4_1:56140239-56140258 | Msa0557680:three_prime_UTR | 25.0% |
| ! | ATGTGAAATATTCTTGTTGA+GGG | - | chr4_1:56140629-56140648 | Msa0557680:intron | 25.0% |
| !! | CACTTTTGTCTAAAAAAATC+AGG | - | chr4_1:56140668-56140687 | Msa0557680:intron | 25.0% |
| !! | CTGTTGTTTAAACACAAAAA+CGG | + | chr4_1:56140829-56140848 | None:intergenic | 25.0% |
| !!! | AGTGCTAGTTTTTTTATGAT+TGG | - | chr4_1:56140868-56140887 | Msa0557680:intron | 25.0% |
| !! | TTATTACTGTTCAAAGTGTT+TGG | + | chr4_1:56141035-56141054 | None:intergenic | 25.0% |
| !!! | ATGATTTCGTTTTTAGAAAG+AGG | - | chr4_1:56141081-56141100 | Msa0557680:intron | 25.0% |
| ! | ACTTGAAACTCAAATTAAGT+AGG | + | chr4_1:56141147-56141166 | None:intergenic | 25.0% |
| !! | AATTTGAGTTTCAAGTAGTT+TGG | - | chr4_1:56141151-56141170 | Msa0557680:intron | 25.0% |
| ! | ACAATGCATTATTATATGTC+GGG | + | chr4_1:56141341-56141360 | None:intergenic | 25.0% |
| ! | GACAATGCATTATTATATGT+CGG | + | chr4_1:56141342-56141361 | None:intergenic | 25.0% |
| ! | GACACATCAAATCTTTATTA+TGG | - | chr4_1:56141386-56141405 | Msa0557680:intron | 25.0% |
| ! | GGTTTATATGTTACATGTTT+AGG | - | chr4_1:56141454-56141473 | Msa0557680:intron | 25.0% |
| ! | ACATTGAACATGATTATGAT+CGG | - | chr4_1:56141542-56141561 | Msa0557680:intron | 25.0% |
| !! | GACTATAGCTTCTTTTATAT+TGG | - | chr4_1:56141800-56141819 | Msa0557680:intron | 25.0% |
| !! | ATACCCAAGATTTTCAATTT+GGG | + | chr4_1:56142122-56142141 | None:intergenic | 25.0% |
| !! | TATACCCAAGATTTTCAATT+TGG | + | chr4_1:56142123-56142142 | None:intergenic | 25.0% |
| !!! | TTAGTTTTGAGAATTTACCA+GGG | + | chr4_1:56142164-56142183 | None:intergenic | 25.0% |
| !!! | ATTAGTTTTGAGAATTTACC+AGG | + | chr4_1:56142165-56142184 | None:intergenic | 25.0% |
| ! | TATTTAAGGAACCTACAAAA+AGG | + | chr4_1:56142452-56142471 | None:intergenic | 25.0% |
| !! | TTTTGCTAACAAGTATCATA+AGG | + | chr4_1:56142479-56142498 | None:intergenic | 25.0% |
| ! | CAATGAAAAAGTTTCTACAA+CGG | - | chr4_1:56142901-56142920 | Msa0557680:intron | 25.0% |
| ! | GGGATAGTAACAAAAAAAAA+AGG | - | chr4_1:56143461-56143480 | Msa0557680:intron | 25.0% |
| ! | TTCTTGATCATGTTCATATT+TGG | - | chr4_1:56143506-56143525 | Msa0557680:intron | 25.0% |
| ! | GGGATAGTAACAAAAAAAAA+AGG | - | chr4_1:56143461-56143480 | Msa0557680:intron | 25.0% |
| ! | TTCTTGATCATGTTCATATT+TGG | - | chr4_1:56143506-56143525 | Msa0557680:intron | 25.0% |
| ! | CCTATATTGTTTAACGAAAA+AGG | + | chr4_1:56144005-56144024 | None:intergenic | 25.0% |
| !!! | CCTTTTTCGTTAAACAATAT+AGG | - | chr4_1:56144002-56144021 | Msa0557680:intron | 25.0% |
| ! | TACACTATTAATGCAAGATT+TGG | - | chr4_1:56144062-56144081 | Msa0557680:intron | 25.0% |
| !!! | TAACTTTTTCCACTAATATG+GGG | + | chr4_1:56144161-56144180 | None:intergenic | 25.0% |
| !!! | GTTAACTTTTTCCACTAATA+TGG | + | chr4_1:56144163-56144182 | None:intergenic | 25.0% |
| !!! | ATATTTTGTTTCAGATTCCA+TGG | - | chr4_1:56144228-56144247 | Msa0557680:CDS | 25.0% |
| !!! | GAACATTTTAGCAATAGTAT+TGG | + | chr4_1:56144640-56144659 | None:intergenic | 25.0% |
| ATAGTGTGAGAGAATGTATT+AGG | + | chr4_1:56140041-56140060 | None:intergenic | 30.0% | |
| AGGTTCTCTCAAAAAAAATG+TGG | + | chr4_1:56140157-56140176 | None:intergenic | 30.0% | |
| GATGTGAAATATTCTTGTTG+AGG | - | chr4_1:56140628-56140647 | Msa0557680:intron | 30.0% | |
| GTTGATGTTGGCATAATAAA+AGG | + | chr4_1:56140770-56140789 | None:intergenic | 30.0% | |
| !!! | GCTAGTTTTTTTATGATTGG+AGG | - | chr4_1:56140871-56140890 | Msa0557680:intron | 30.0% |
| !!! | AGTTTTTTTATGATTGGAGG+TGG | - | chr4_1:56140874-56140893 | Msa0557680:intron | 30.0% |
| !! | TTTCGTTTTTAGAAAGAGCA+AGG | - | chr4_1:56141119-56141138 | Msa0557680:intron | 30.0% |
| !!! | CACGGATGGATTATATTTTA+GGG | - | chr4_1:56141188-56141207 | Msa0557680:intron | 30.0% |
| !!! | ACGGATGGATTATATTTTAG+GGG | - | chr4_1:56141189-56141208 | Msa0557680:intron | 30.0% |
| CAATGCATTATTATATGTCG+GGG | + | chr4_1:56141340-56141359 | None:intergenic | 30.0% | |
| !! | ATTATGGAGTAGTTTGTTGT+TGG | - | chr4_1:56141402-56141421 | Msa0557680:intron | 30.0% |
| !! | TTATGGAGTAGTTTGTTGTT+GGG | - | chr4_1:56141403-56141422 | Msa0557680:intron | 30.0% |
| ! | GTTTCATTGTTGTTGAAAGA+GGG | + | chr4_1:56141642-56141661 | None:intergenic | 30.0% |
| ! | TGTTTCATTGTTGTTGAAAG+AGG | + | chr4_1:56141643-56141662 | None:intergenic | 30.0% |
| ! | AACTTCAGACATAAAGGTAT+CGG | + | chr4_1:56141731-56141750 | None:intergenic | 30.0% |
| ACATGATTTATTGCTGTGTA+CGG | - | chr4_1:56141768-56141787 | Msa0557680:intron | 30.0% | |
| ! | ATAAGGGTGCAATATAATGT+TGG | + | chr4_1:56142053-56142072 | None:intergenic | 30.0% |
| AACTCCCAAATTGAAAATCT+TGG | - | chr4_1:56142115-56142134 | Msa0557680:intron | 30.0% | |
| ACTCCCAAATTGAAAATCTT+GGG | - | chr4_1:56142116-56142135 | Msa0557680:intron | 30.0% | |
| TGAGTTCTTCACTAACTTTA+GGG | + | chr4_1:56142256-56142275 | None:intergenic | 30.0% | |
| ATGAGTTCTTCACTAACTTT+AGG | + | chr4_1:56142257-56142276 | None:intergenic | 30.0% | |
| AAATGCTAACAAGTTCTCTT+AGG | - | chr4_1:56142316-56142335 | Msa0557680:intron | 30.0% | |
| AATGCTAACAAGTTCTCTTA+GGG | - | chr4_1:56142317-56142336 | Msa0557680:intron | 30.0% | |
| ! | TTTTGTAGGTTCCTTTTTGT+AGG | - | chr4_1:56142438-56142457 | Msa0557680:intron | 30.0% |
| TAGTCAAGAATGTTATAGCA+TGG | + | chr4_1:56142576-56142595 | None:intergenic | 30.0% | |
| TGCTATAACATTCTTGACTA+AGG | - | chr4_1:56142576-56142595 | Msa0557680:intron | 30.0% | |
| !! | TTGAGAGTGATTGTTATTTG+AGG | - | chr4_1:56142817-56142836 | Msa0557680:intron | 30.0% |
| AAAGTTTCTACAACGGTTAA+AGG | - | chr4_1:56142908-56142927 | Msa0557680:intron | 30.0% | |
| !! | AAATTCAACCCCATTTTTGT+TGG | - | chr4_1:56143263-56143282 | Msa0557680:intron | 30.0% |
| GAAGTTCAGATATGTACATT+GGG | - | chr4_1:56143295-56143314 | Msa0557680:intron | 30.0% | |
| GAACATGATCAAGAAGTAAT+CGG | + | chr4_1:56143501-56143520 | None:intergenic | 30.0% | |
| GAACATGATCAAGAAGTAAT+CGG | + | chr4_1:56143501-56143520 | None:intergenic | 30.0% | |
| TTGGGATTAAATTGGATCAA+CGG | + | chr4_1:56143705-56143724 | None:intergenic | 30.0% | |
| AGAAAAAATCAAACTACTCC+AGG | + | chr4_1:56143824-56143843 | None:intergenic | 30.0% | |
| TTTCAGTTGGAAACCAAATT+AGG | - | chr4_1:56143845-56143864 | Msa0557680:intron | 30.0% | |
| TTGTTTAACGAAAAAGGAGT+TGG | + | chr4_1:56143999-56144018 | None:intergenic | 30.0% | |
| ! | TATGTTGATGAGGATGAATA+AGG | + | chr4_1:56144090-56144109 | None:intergenic | 30.0% |
| ! | AAAAGTGCAATTGACTATCA+AGG | - | chr4_1:56144321-56144340 | Msa0557680:CDS | 30.0% |
| TCAGACATTAATAAGGAACA+TGG | - | chr4_1:56144353-56144372 | Msa0557680:CDS | 30.0% | |
| CTAGTTCACGACAAAGAAAT+GGG | - | chr4_1:56139995-56140014 | Msa0557680:three_prime_UTR | 35.0% | |
| CTCAAACTATTCATATGAGG+AGG | + | chr4_1:56140128-56140147 | None:intergenic | 35.0% | |
| TCTTGTCTCCATAGTTTCAA+GGG | + | chr4_1:56140205-56140224 | None:intergenic | 35.0% | |
| TTCTTGTCTCCATAGTTTCA+AGG | + | chr4_1:56140206-56140225 | None:intergenic | 35.0% | |
| TTGAAACTATGGAGACAAGA+AGG | - | chr4_1:56140205-56140224 | Msa0557680:three_prime_UTR | 35.0% | |
| AAGAGAAGTTCCAAAAAAGC+TGG | - | chr4_1:56140351-56140370 | Msa0557680:CDS | 35.0% | |
| !!! | ATTTGAGCTTCCAGCTTTTT+TGG | + | chr4_1:56140364-56140383 | None:intergenic | 35.0% |
| GCAAGCATAAATGTTGATGT+TGG | + | chr4_1:56140782-56140801 | None:intergenic | 35.0% | |
| AATAAGCAGAGGAAAAGTCT+TGG | + | chr4_1:56140946-56140965 | None:intergenic | 35.0% | |
| CTTGGAACTAAAATAAGCAG+AGG | + | chr4_1:56140957-56140976 | None:intergenic | 35.0% | |
| !!! | GCACGGATGGATTATATTTT+AGG | - | chr4_1:56141187-56141206 | Msa0557680:intron | 35.0% |
| TAAAGTGAATTCTAGCCACT+AGG | + | chr4_1:56141284-56141303 | None:intergenic | 35.0% | |
| ! | ATATGAATAAGTAGGGTGTC+CGG | - | chr4_1:56141306-56141325 | Msa0557680:intron | 35.0% |
| TATCAACTGAGCTATGTTCA+CGG | - | chr4_1:56141363-56141382 | Msa0557680:intron | 35.0% | |
| !! | TATGGAGTAGTTTGTTGTTG+GGG | - | chr4_1:56141404-56141423 | Msa0557680:intron | 35.0% |
| GAAGAGAACTTCAGACATAA+AGG | + | chr4_1:56141737-56141756 | None:intergenic | 35.0% | |
| ATGTATGGATGACCCATTAA+TGG | + | chr4_1:56141851-56141870 | None:intergenic | 35.0% | |
| ACTCAATACGAGTGAATGTA+TGG | + | chr4_1:56141866-56141885 | None:intergenic | 35.0% | |
| ! | TTCTTCACTAACTTTAGGGA+TGG | + | chr4_1:56142252-56142271 | None:intergenic | 35.0% |
| !! | AGAGTGATTGTTATTTGAGG+TGG | - | chr4_1:56142820-56142839 | Msa0557680:intron | 35.0% |
| !! | TGATTGTTATTTGAGGTGGA+AGG | - | chr4_1:56142824-56142843 | Msa0557680:intron | 35.0% |
| !! | GATTGTTATTTGAGGTGGAA+GGG | - | chr4_1:56142825-56142844 | Msa0557680:intron | 35.0% |
| CACATGATCCAACAAAAATG+GGG | + | chr4_1:56143274-56143293 | None:intergenic | 35.0% | |
| CCACATGATCCAACAAAAAT+GGG | + | chr4_1:56143275-56143294 | None:intergenic | 35.0% | |
| !! | CCATTTTTGTTGGATCATGT+GGG | - | chr4_1:56143273-56143292 | Msa0557680:intron | 35.0% |
| GGAAGTTCAGATATGTACAT+TGG | - | chr4_1:56143294-56143313 | Msa0557680:intron | 35.0% | |
| TGGGATTAAATTGGATCAAC+GGG | + | chr4_1:56143704-56143723 | None:intergenic | 35.0% | |
| TTTAACGAAAAAGGAGTTGG+AGG | + | chr4_1:56143996-56144015 | None:intergenic | 35.0% | |
| TTGTTTGTTCCCCATATTAG+TGG | - | chr4_1:56144149-56144168 | Msa0557680:CDS | 35.0% | |
| CATCAAATTCAGATAGTCCA+TGG | + | chr4_1:56144248-56144267 | None:intergenic | 35.0% | |
| ACTCAAAAAGAAGTTGCAGA+AGG | - | chr4_1:56144268-56144287 | Msa0557680:CDS | 35.0% | |
| ! | GATAGTCAATTGCACTTTTG+CGG | + | chr4_1:56144320-56144339 | None:intergenic | 35.0% |
| CATGGTTGAAACAAAATCTC+AGG | - | chr4_1:56144371-56144390 | Msa0557680:CDS | 35.0% | |
| AAAAAATGTCCCTCGGATTT+CGG | + | chr4_1:56144617-56144636 | None:intergenic | 35.0% | |
| GTATTGGAAAAAATGTCCCT+CGG | + | chr4_1:56144624-56144643 | None:intergenic | 35.0% | |
| TTTGTCGTGAACTAGCTAGA+GGG | + | chr4_1:56139990-56140009 | None:intergenic | 40.0% | |
| GCTAGTTCACGACAAAGAAA+TGG | - | chr4_1:56139994-56140013 | Msa0557680:three_prime_UTR | 40.0% | |
| TATTAGGACCACAAGTGGTA+TGG | + | chr4_1:56140025-56140044 | None:intergenic | 40.0% | |
| GAATGTATTAGGACCACAAG+TGG | + | chr4_1:56140030-56140049 | None:intergenic | 40.0% | |
| GTCAGAGAGATCTAGAAACA+AGG | + | chr4_1:56140177-56140196 | None:intergenic | 40.0% | |
| ! | GACCTTTTCCCTTGAAACTA+TGG | - | chr4_1:56140194-56140213 | Msa0557680:three_prime_UTR | 40.0% |
| CTCCATAGTTTCAAGGGAAA+AGG | + | chr4_1:56140199-56140218 | None:intergenic | 40.0% | |
| GAAGTACAAAGAGGATCATG+AGG | - | chr4_1:56140248-56140267 | Msa0557680:three_prime_UTR | 40.0% | |
| !! | AGAGGATACGGATTTTGAAG+AGG | - | chr4_1:56140284-56140303 | Msa0557680:exon | 40.0% |
| !! | TACGGATTTTGAAGAGGAAG+AGG | - | chr4_1:56140290-56140309 | Msa0557680:exon | 40.0% |
| !! | GATTTTGAAGAGGAAGAGGA+TGG | - | chr4_1:56140294-56140313 | Msa0557680:CDS | 40.0% |
| ! | TATTCCACCTTGTTGTCAAG+TGG | - | chr4_1:56140383-56140402 | Msa0557680:intron | 40.0% |
| CAATTCTCCACTTGACAACA+AGG | + | chr4_1:56140393-56140412 | None:intergenic | 40.0% | |
| GTGAAGCTAAGCAATATCAC+CGG | - | chr4_1:56140427-56140446 | Msa0557680:intron | 40.0% | |
| CTGCAATCCTGTAATGTGTA+CGG | + | chr4_1:56140490-56140509 | None:intergenic | 40.0% | |
| ACATTACAGGATTGCAGCAA+AGG | - | chr4_1:56140493-56140512 | Msa0557680:intron | 40.0% | |
| AAGTAGTTTGGTCCTGATCA+CGG | - | chr4_1:56141163-56141182 | Msa0557680:intron | 40.0% | |
| !!! | TTTTTTGTCAGGTAGCCTAG+TGG | - | chr4_1:56141266-56141285 | Msa0557680:intron | 40.0% |
| ! | TATGAATAAGTAGGGTGTCC+GGG | - | chr4_1:56141307-56141326 | Msa0557680:intron | 40.0% |
| GTGAACATAGCTCAGTTGAT+AGG | + | chr4_1:56141364-56141383 | None:intergenic | 40.0% | |
| ATCAACTGAGCTATGTTCAC+GGG | - | chr4_1:56141364-56141383 | Msa0557680:intron | 40.0% | |
| !! | AGACATAAAGGTATCGGTTG+AGG | + | chr4_1:56141725-56141744 | None:intergenic | 40.0% |
| ! | TGTCTGAAGTTCTCTTCAGA+TGG | - | chr4_1:56141740-56141759 | Msa0557680:intron | 40.0% |
| ! | GTCTGAAGTTCTCTTCAGAT+GGG | - | chr4_1:56141741-56141760 | Msa0557680:intron | 40.0% |
| ! | TCTGAAGTTCTCTTCAGATG+GGG | - | chr4_1:56141742-56141761 | Msa0557680:intron | 40.0% |
| TATTGCTGTGTACGGTGTAT+TGG | - | chr4_1:56141776-56141795 | Msa0557680:intron | 40.0% | |
| ATTGCTGTGTACGGTGTATT+GGG | - | chr4_1:56141777-56141796 | Msa0557680:intron | 40.0% | |
| AGGGTGCAATATAATGTTGG+AGG | + | chr4_1:56142050-56142069 | None:intergenic | 40.0% | |
| AAGATTTCTCAACACTACCC+TGG | - | chr4_1:56142144-56142163 | Msa0557680:intron | 40.0% | |
| GTTTCTACAACGGTTAAAGG+TGG | - | chr4_1:56142911-56142930 | Msa0557680:intron | 40.0% | |
| !!! | GTGGTTTTAGTAGTGGTCAA+CGG | - | chr4_1:56142942-56142961 | Msa0557680:intron | 40.0% |
| TTTATCACCTCTGATCGTTG+TGG | + | chr4_1:56143076-56143095 | None:intergenic | 40.0% | |
| AACGATCAGAGGTGATAAAG+TGG | - | chr4_1:56143077-56143096 | Msa0557680:intron | 40.0% | |
| CTAAATTAACACATTGCCGC+TGG | + | chr4_1:56143160-56143179 | None:intergenic | 40.0% | |
| CAGCGGCAATGTGTTAATTT+AGG | - | chr4_1:56143158-56143177 | Msa0557680:intron | 40.0% | |
| !! | CCCATTTTTGTTGGATCATG+TGG | - | chr4_1:56143272-56143291 | Msa0557680:intron | 40.0% |
| CCCACATGATCCAACAAAAA+TGG | + | chr4_1:56143276-56143295 | None:intergenic | 40.0% | |
| TGGTGTCTAATTCACTTGAG+CGG | + | chr4_1:56143333-56143352 | None:intergenic | 40.0% | |
| AAATCACGAAGACACATACG+AGG | - | chr4_1:56143439-56143458 | Msa0557680:intron | 40.0% | |
| AATCACGAAGACACATACGA+GGG | - | chr4_1:56143440-56143459 | Msa0557680:intron | 40.0% | |
| AAATCACGAAGACACATACG+AGG | - | chr4_1:56143439-56143458 | Msa0557680:intron | 40.0% | |
| AATCACGAAGACACATACGA+GGG | - | chr4_1:56143440-56143459 | Msa0557680:intron | 40.0% | |
| GTGTACGTCTTATGTTGATG+AGG | + | chr4_1:56144100-56144119 | None:intergenic | 40.0% | |
| !! | GACAGAAGATAGAGAGCATT+TGG | + | chr4_1:56144435-56144454 | None:intergenic | 40.0% |
| ATTACTTTCTCCGAAATCCG+AGG | - | chr4_1:56144604-56144623 | Msa0557680:five_prime_UTR | 40.0% | |
| TTACTTTCTCCGAAATCCGA+GGG | - | chr4_1:56144605-56144624 | Msa0557680:five_prime_UTR | 40.0% | |
| CTTTGTCGTGAACTAGCTAG+AGG | + | chr4_1:56139991-56140010 | None:intergenic | 45.0% | |
| TATGGAGACAAGAAGGTCAG+AGG | - | chr4_1:56140212-56140231 | Msa0557680:three_prime_UTR | 45.0% | |
| ATGGAGACAAGAAGGTCAGA+GGG | - | chr4_1:56140213-56140232 | Msa0557680:three_prime_UTR | 45.0% | |
| GTACAAAGAGGATCATGAGG+AGG | - | chr4_1:56140251-56140270 | Msa0557680:three_prime_UTR | 45.0% | |
| GGAAGAAGAGGAAGAGGATA+CGG | - | chr4_1:56140272-56140291 | Msa0557680:three_prime_UTR | 45.0% | |
| AAGAGGAAGAGGATGGTAGA+AGG | - | chr4_1:56140301-56140320 | Msa0557680:CDS | 45.0% | |
| AAGAGGATGGTAGAAGGAAG+AGG | - | chr4_1:56140307-56140326 | Msa0557680:CDS | 45.0% | |
| AGAGGATGGTAGAAGGAAGA+GGG | - | chr4_1:56140308-56140327 | Msa0557680:CDS | 45.0% | |
| TTCTCCACTTGACAACAAGG+TGG | + | chr4_1:56140390-56140409 | None:intergenic | 45.0% | |
| GCAATATCACCGGAGACATA+AGG | - | chr4_1:56140437-56140456 | Msa0557680:intron | 45.0% | |
| ACTCACAGACCTTATGTCTC+CGG | + | chr4_1:56140449-56140468 | None:intergenic | 45.0% | |
| AATCCTGTAATGTGTACGGC+AGG | + | chr4_1:56140486-56140505 | None:intergenic | 45.0% | |
| !! | GGTTTTGTCAGCAATGTAGC+AGG | - | chr4_1:56140514-56140533 | Msa0557680:intron | 45.0% |
| ! | ATGAATAAGTAGGGTGTCCG+GGG | - | chr4_1:56141308-56141327 | Msa0557680:intron | 45.0% |
| TTGCTGTGTACGGTGTATTG+GGG | - | chr4_1:56141778-56141797 | Msa0557680:intron | 45.0% | |
| GGATGGAATCAGTGACATAC+TGG | + | chr4_1:56142235-56142254 | None:intergenic | 45.0% | |
| ! | TGTTATTTGAGGTGGAAGGG+TGG | - | chr4_1:56142828-56142847 | Msa0557680:intron | 45.0% |
| CTACAACGGTTAAAGGTGGT+TGG | - | chr4_1:56142915-56142934 | Msa0557680:intron | 45.0% | |
| !!! | TGGAGTGGTGGTTTTAGTAG+TGG | - | chr4_1:56142935-56142954 | Msa0557680:intron | 45.0% |
| !! | GTTTTAGTAGTGGTCAACGG+TGG | - | chr4_1:56142945-56142964 | Msa0557680:intron | 45.0% |
| ACGGTGGTCATAGTAGTGTT+TGG | - | chr4_1:56142961-56142980 | Msa0557680:intron | 45.0% | |
| GTGGTCATAGTAGTGTTTGG+TGG | - | chr4_1:56142964-56142983 | Msa0557680:intron | 45.0% | |
| ATGTAGTCGCAACCTTAGAG+TGG | - | chr4_1:56142989-56143008 | Msa0557680:intron | 45.0% | |
| CCACTTTGATCACCACTCTA+AGG | + | chr4_1:56143004-56143023 | None:intergenic | 45.0% | |
| CCTTAGAGTGGTGATCAAAG+TGG | - | chr4_1:56143001-56143020 | Msa0557680:intron | 45.0% | |
| AGAGTGGTGATCAAAGTGGT+TGG | - | chr4_1:56143005-56143024 | Msa0557680:intron | 45.0% | |
| ! | AGGTTTGATGCTGGTTGAAG+TGG | - | chr4_1:56143032-56143051 | Msa0557680:intron | 45.0% |
| GATCAGAGGTGATAAAGTGG+TGG | - | chr4_1:56143080-56143099 | Msa0557680:intron | 45.0% | |
| ATAAAGTGGTGGTCGACAGT+GGG | - | chr4_1:56143091-56143110 | Msa0557680:intron | 45.0% | |
| TGGTAGTCGTAGTGGTGATT+AGG | - | chr4_1:56143129-56143148 | Msa0557680:intron | 45.0% | |
| AATTAACACATTGCCGCTGG+TGG | + | chr4_1:56143157-56143176 | None:intergenic | 45.0% | |
| GTGTCTAATTCACTTGAGCG+GGG | + | chr4_1:56143331-56143350 | None:intergenic | 45.0% | |
| GGTGTCTAATTCACTTGAGC+GGG | + | chr4_1:56143332-56143351 | None:intergenic | 45.0% | |
| ATCACGAAGACACATACGAG+GGG | - | chr4_1:56143441-56143460 | Msa0557680:intron | 45.0% | |
| ATCACGAAGACACATACGAG+GGG | - | chr4_1:56143441-56143460 | Msa0557680:intron | 45.0% | |
| !! | AAGAAGTTGCAGAAGGCGTT+TGG | - | chr4_1:56144275-56144294 | Msa0557680:CDS | 45.0% |
| AGAGACCAGCAACATACGAA+GGG | + | chr4_1:56144403-56144422 | None:intergenic | 45.0% | |
| TAGAGACCAGCAACATACGA+AGG | + | chr4_1:56144404-56144423 | None:intergenic | 45.0% | |
| ! | TCGTATGTTGCTGGTCTCTA+AGG | - | chr4_1:56144404-56144423 | Msa0557680:CDS | 45.0% |
| !!! | TATATATTTTTGTTTAATTA+AGG | - | chr4_1:56140592-56140611 | Msa0557680:intron | 5.0% |
| TGGGAAGACCATACCACTTG+TGG | - | chr4_1:56140014-56140033 | Msa0557680:three_prime_UTR | 50.0% | |
| GGATCATGAGGAGGAAGAAG+AGG | - | chr4_1:56140260-56140279 | Msa0557680:three_prime_UTR | 50.0% | |
| TGAGGAGGAAGAAGAGGAAG+AGG | - | chr4_1:56140266-56140285 | Msa0557680:three_prime_UTR | 50.0% | |
| AATGTGTACGGCAGGTGCTT+TGG | + | chr4_1:56140478-56140497 | None:intergenic | 50.0% | |
| GCTGTTGGAGCGATGATTAG+TGG | - | chr4_1:56142850-56142869 | Msa0557680:intron | 50.0% | |
| ! | TGGAGCGATGATTAGTGGAC+AGG | - | chr4_1:56142855-56142874 | Msa0557680:intron | 50.0% |
| ! | AGCGATGATTAGTGGACAGG+TGG | - | chr4_1:56142858-56142877 | Msa0557680:intron | 50.0% |
| TTGATCACTCCCAACCGTTG+TGG | + | chr4_1:56142884-56142903 | None:intergenic | 50.0% | |
| ACGGTTAAAGGTGGTTGGAG+TGG | - | chr4_1:56142920-56142939 | Msa0557680:intron | 50.0% | |
| GTTAAAGGTGGTTGGAGTGG+TGG | - | chr4_1:56142923-56142942 | Msa0557680:intron | 50.0% | |
| TGATCAAAGTGGTTGGCGTG+AGG | - | chr4_1:56143012-56143031 | Msa0557680:intron | 50.0% | |
| CATGTAGCCACAACGATCAG+AGG | - | chr4_1:56143066-56143085 | Msa0557680:intron | 50.0% | |
| GATAAAGTGGTGGTCGACAG+TGG | - | chr4_1:56143090-56143109 | Msa0557680:intron | 50.0% | |
| ACAGTGGGTAGAGTTGTGCT+TGG | - | chr4_1:56143106-56143125 | Msa0557680:intron | 50.0% | |
| TGGTGATTAGGATCCACCAG+CGG | - | chr4_1:56143141-56143160 | Msa0557680:intron | 50.0% | |
| GTTTGGCTGGGCATAATGAG+AGG | - | chr4_1:56144292-56144311 | Msa0557680:CDS | 50.0% | |
| TCAAGCCCTTCGTATGTTGC+TGG | - | chr4_1:56144395-56144414 | Msa0557680:CDS | 50.0% | |
| GCACCTGCCGTACACATTAC+AGG | - | chr4_1:56140480-56140499 | Msa0557680:intron | 55.0% | |
| GGAGGTGGAGACATGCTTCT+TGG | - | chr4_1:56140889-56140908 | Msa0557680:intron | 55.0% | |
| TTGGTCCTGATCACGGTGCA+CGG | - | chr4_1:56141170-56141189 | Msa0557680:intron | 55.0% | |
| ATATGTCGGGGTTCGAACCC+CGG | + | chr4_1:56141328-56141347 | None:intergenic | 55.0% | |
| ! | TAGTGGACAGGTGGCCACAA+CGG | - | chr4_1:56142867-56142886 | Msa0557680:intron | 55.0% |
| GTTGGCGTGAGGTTTGATGC+TGG | - | chr4_1:56143023-56143042 | Msa0557680:intron | 55.0% | |
| GTGGGTAGAGTTGTGCTTGG+TGG | - | chr4_1:56143109-56143128 | Msa0557680:intron | 55.0% | |
| ! | GTGCTTGGTGGTAGTCGTAG+TGG | - | chr4_1:56143121-56143140 | Msa0557680:intron | 55.0% |
| !! | AGTTGCAGAAGGCGTTTGGC+TGG | - | chr4_1:56144279-56144298 | Msa0557680:CDS | 55.0% |
| !! | GTTGCAGAAGGCGTTTGGCT+GGG | - | chr4_1:56144280-56144299 | Msa0557680:CDS | 55.0% |
| TCCTGATCACGGTGCACGGA+TGG | - | chr4_1:56141174-56141193 | Msa0557680:intron | 60.0% | |
| TCCATCCGTGCACCGTGATC+AGG | + | chr4_1:56141178-56141197 | None:intergenic | 60.0% | |
| TGAGGTGGAAGGGTGGCTGT+TGG | - | chr4_1:56142835-56142854 | Msa0557680:intron | 60.0% | |
| GACAGGTGGCCACAACGGTT+GGG | - | chr4_1:56142872-56142891 | Msa0557680:intron | 60.0% | |
| GGACAGGTGGCCACAACGGT+TGG | - | chr4_1:56142871-56142890 | Msa0557680:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 56139976 | 56144667 | 56139976 | ID=Msa0557680;Name=Msa0557680 |
| chr4_1 | mRNA | 56139976 | 56144667 | 56139976 | ID=Msa0557680-mRNA-1;Parent=Msa0557680;Name=Msa0557680-mRNA-1;_AED=0.22;_eAED=0.22;_QI=237|1|1|1|1|1|2|317|143 |
| chr4_1 | exon | 56139976 | 56140401 | 56139976 | ID=Msa0557680-mRNA-1:exon:16814;Parent=Msa0557680-mRNA-1 |
| chr4_1 | exon | 56144108 | 56144667 | 56144108 | ID=Msa0557680-mRNA-1:exon:16813;Parent=Msa0557680-mRNA-1 |
| chr4_1 | five_prime_UTR | 56144431 | 56144667 | 56144431 | ID=Msa0557680-mRNA-1:five_prime_utr;Parent=Msa0557680-mRNA-1 |
| chr4_1 | CDS | 56144108 | 56144430 | 56144108 | ID=Msa0557680-mRNA-1:cds;Parent=Msa0557680-mRNA-1 |
| chr4_1 | CDS | 56140293 | 56140401 | 56140293 | ID=Msa0557680-mRNA-1:cds;Parent=Msa0557680-mRNA-1 |
| chr4_1 | three_prime_UTR | 56139976 | 56140292 | 56139976 | ID=Msa0557680-mRNA-1:three_prime_utr;Parent=Msa0557680-mRNA-1 |
| Gene Sequence |
| Protein sequence |
