AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0813200

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0813200 MtrunA17_Chr5g0430131 82.456 285 24 1 1 259 148 432 4.67e-155 441
Msa0813200 MtrunA17_Chr5g0430111 79.422 277 30 2 3 252 150 426 8.50e-153 432
Msa0813200 MtrunA17_Chr5g0430091 75.874 286 42 2 1 259 148 433 5.29e-142 408
Msa0813200 MtrunA17_Chr5g0430031 70.629 286 57 2 1 259 148 433 4.59e-139 400
Msa0813200 MtrunA17_Chr5g0430101 71.731 283 53 2 3 259 149 430 1.18e-138 399
Msa0813200 MtrunA17_Chr5g0430081 72.028 286 53 2 1 259 146 431 7.08e-138 397
Msa0813200 MtrunA17_Chr5g0430071 74.825 286 45 2 1 259 1 286 4.13e-137 390
Msa0813200 MtrunA17_Chr8g0390881 54.007 287 102 3 2 259 148 433 2.97e-99 299
Msa0813200 MtrunA17_Chr6g0484811 53.237 278 100 4 1 249 148 424 1.19e-89 274
Msa0813200 MtrunA17_Chr6g0484841 48.951 286 119 2 1 259 148 433 2.42e-89 273
Msa0813200 MtrunA17_Chr8g0390871 62.179 156 58 1 104 259 1 155 7.30e-68 209
Msa0813200 MtrunA17_Chr2g0310391 44.484 281 115 7 2 249 140 412 1.35e-65 211
Msa0813200 MtrunA17_Chr2g0310381 43.299 291 124 7 2 259 140 422 5.88e-64 207
Msa0813200 MtrunA17_Chr8g0382901 44.106 263 124 4 2 249 140 394 9.04e-62 209
Msa0813200 MtrunA17_Chr8g0382901 40.625 288 133 5 2 259 604 883 5.00e-59 201
Msa0813200 MtrunA17_Chr5g0430151 83.654 104 17 0 156 259 1 104 2.57e-57 181
Msa0813200 MtrunA17_Chr3g0101731 38.276 290 139 7 2 259 149 430 9.94e-54 181
Msa0813200 MtrunA17_Chr4g0020041 39.721 287 137 6 2 258 150 430 4.33e-53 179
Msa0813200 MtrunA17_Chr3g0101721 38.488 291 138 7 2 259 150 432 1.17e-52 178
Msa0813200 MtrunA17_Chr5g0430041 76.923 104 24 0 156 259 1 104 1.56e-52 168
Msa0813200 MtrunA17_Chr4g0058231 37.075 294 138 8 5 258 143 429 2.96e-52 177
Msa0813200 MtrunA17_Chr4g0047661 46.569 204 98 4 60 258 248 445 3.05e-50 172
Msa0813200 MtrunA17_Chr4g0047631 45.813 203 100 4 60 258 244 440 1.92e-49 170
Msa0813200 MtrunA17_Chr4g0058261 35.294 289 146 5 5 259 179 460 2.45e-49 170
Msa0813200 MtrunA17_Chr4g0047691 43.842 203 104 3 60 258 247 443 3.00e-49 169
Msa0813200 MtrunA17_Chr4g0058201 35.664 286 146 6 5 259 143 421 4.22e-49 168
Msa0813200 MtrunA17_Chr4g0011961 36.735 294 139 7 2 259 142 424 6.33e-49 168
Msa0813200 MtrunA17_Chr6g0465511 31.944 288 156 6 4 258 149 429 6.47e-49 168
Msa0813200 MtrunA17_Chr6g0466331 31.944 288 156 6 4 258 149 429 2.76e-48 166
Msa0813200 MtrunA17_Chr3g0101741 36.585 287 139 6 2 258 78 351 3.42e-48 164
Msa0813200 MtrunA17_Chr5g0445461 37.762 286 140 9 2 258 152 428 4.46e-48 166
Msa0813200 MtrunA17_Chr4g0058191 35.172 290 149 7 2 259 137 419 4.77e-48 166
Msa0813200 MtrunA17_Chr8g0361471 31.707 287 156 6 5 258 150 429 2.16e-47 164
Msa0813200 MtrunA17_Chr3g0116681 42.654 211 112 6 51 259 229 432 2.83e-47 164
Msa0813200 MtrunA17_Chr4g0011981 36.860 293 141 6 2 259 142 425 2.92e-47 164
Msa0813200 MtrunA17_Chr7g0254641 44.103 195 96 4 60 248 241 428 3.76e-47 164
Msa0813200 MtrunA17_Chr4g0047641 44.828 203 102 4 60 258 248 444 4.11e-47 164
Msa0813200 MtrunA17_Chr3g0116741 33.798 287 150 8 5 259 166 444 4.13e-47 164
Msa0813200 MtrunA17_Chr5g0403331 33.904 292 149 8 2 258 150 432 1.99e-46 161
Msa0813200 MtrunA17_Chr3g0094171 36.694 248 137 6 20 253 188 429 2.42e-46 161
Msa0813200 MtrunA17_Chr3g0101701 31.359 287 159 5 4 258 153 433 2.79e-46 161
Msa0813200 MtrunA17_Chr5g0445441 36.620 284 146 7 2 258 193 469 3.01e-46 162
Msa0813200 MtrunA17_Chr3g0101811 33.224 304 149 7 2 259 150 445 3.11e-46 161
Msa0813200 MtrunA17_Chr5g0431641 35.915 284 148 7 2 258 152 428 4.16e-46 160
Msa0813200 MtrunA17_Chr7g0218611 34.138 290 147 6 5 259 149 429 4.89e-46 160
Msa0813200 MtrunA17_Chr6g0463801 34.722 288 147 6 2 259 150 426 8.67e-46 160
Msa0813200 MtrunA17_Chr4g0024771 36.268 284 147 7 2 258 152 428 8.90e-46 160
Msa0813200 MtrunA17_Chr3g0101631 35.714 294 134 9 2 258 149 424 1.20e-45 159
Msa0813200 MtrunA17_Chr5g0431671 36.268 284 147 7 2 258 153 429 1.22e-45 159
Msa0813200 MtrunA17_Chr8g0372251 34.767 279 144 8 7 251 151 425 1.54e-45 159
Msa0813200 MtrunA17_Chr5g0405001 33.969 262 138 6 23 251 174 433 3.33e-45 158
Msa0813200 MtrunA17_Chr3g0094231 42.268 194 105 3 60 253 236 422 3.33e-45 158
Msa0813200 MtrunA17_Chr1g0162811 36.364 286 146 8 2 258 150 428 4.72e-45 158
Msa0813200 MtrunA17_Chr4g0076161 38.406 276 132 9 2 249 152 417 5.34e-45 157
Msa0813200 MtrunA17_Chr3g0101711 32.069 290 153 6 4 258 152 432 5.59e-45 157
Msa0813200 MtrunA17_Chr3g0101621 36.332 289 132 8 2 256 146 416 5.86e-45 157
Msa0813200 MtrunA17_Chr4g0058281 34.694 294 147 7 2 259 158 442 6.25e-45 157
Msa0813200 MtrunA17_Chr5g0445421 35.361 263 157 6 2 258 226 481 1.03e-44 158
Msa0813200 MtrunA17_Chr3g0101831 37.931 290 140 6 2 259 150 431 1.12e-44 157
Msa0813200 MtrunA17_Chr5g0419691 34.708 291 150 5 2 259 142 425 2.51e-44 155
Msa0813200 MtrunA17_Chr6g0472311 42.180 211 104 5 60 259 242 445 3.30e-44 155
Msa0813200 MtrunA17_Chr3g0101601 35.274 292 134 8 2 256 149 422 3.46e-44 155
Msa0813200 MtrunA17_Chr2g0310351 55.833 120 52 1 130 249 1 119 3.91e-44 147
Msa0813200 MtrunA17_Chr5g0403321 32.653 294 153 5 2 258 149 434 6.10e-44 155
Msa0813200 MtrunA17_Chr3g0084921 34.219 301 144 8 4 259 149 440 1.02e-43 154
Msa0813200 MtrunA17_Chr5g0445451 34.155 284 153 7 2 258 152 428 1.11e-43 154
Msa0813200 MtrunA17_Chr4g0056951 39.048 210 117 4 53 259 239 440 1.45e-43 154
Msa0813200 MtrunA17_Chr6g0463791 45.263 190 95 4 60 249 234 414 2.01e-43 153
Msa0813200 MtrunA17_Chr4g0011871 33.562 292 153 6 2 259 142 426 2.03e-43 153
Msa0813200 MtrunA17_Chr5g0431591 39.698 199 116 3 60 258 52 246 2.34e-43 149
Msa0813200 MtrunA17_Chr5g0403351 30.137 292 160 6 2 258 149 431 2.95e-43 153
Msa0813200 MtrunA17_Chr1g0167321 38.542 288 140 5 2 258 147 428 3.09e-43 153
Msa0813200 MtrunA17_Chr4g0030711 31.864 295 149 8 2 253 149 434 4.32e-43 153
Msa0813200 MtrunA17_Chr3g0101691 31.010 287 160 5 4 258 153 433 4.39e-43 152
Msa0813200 MtrunA17_Chr1g0156101 32.895 304 150 6 2 259 145 440 4.67e-43 152
Msa0813200 MtrunA17_Chr7g0218601 34.130 293 147 9 2 259 147 428 8.12e-43 152
Msa0813200 MtrunA17_Chr3g0101761 37.113 291 142 6 2 259 148 430 1.05e-42 151
Msa0813200 MtrunA17_Chr1g0162801 38.194 288 141 8 2 258 150 431 1.27e-42 151
Msa0813200 MtrunA17_Chr3g0101661 31.119 286 160 5 4 258 153 432 1.60e-42 151
Msa0813200 MtrunA17_Chr8g0344151 40.099 202 113 4 60 259 238 433 1.76e-42 151
Msa0813200 MtrunA17_Chr4g0011941 53.077 130 60 1 130 259 1 129 1.91e-42 143
Msa0813200 MtrunA17_Chr4g0011921 37.415 294 138 6 2 259 142 425 2.55e-42 150
Msa0813200 MtrunA17_Chr4g0011901 42.786 201 108 3 60 259 231 425 4.75e-42 150
Msa0813200 MtrunA17_Chr3g0101571 37.165 261 146 7 8 258 175 427 6.25e-42 149
Msa0813200 MtrunA17_Chr3g0101671 31.250 288 158 6 4 258 153 433 6.28e-42 149
Msa0813200 MtrunA17_Chr3g0101821 36.897 290 142 6 2 258 148 429 9.85e-42 149
Msa0813200 MtrunA17_Chr4g0011851 48.551 138 70 1 122 259 8 144 1.12e-41 142
Msa0813200 MtrunA17_Chr7g0258211 36.444 225 129 6 31 250 208 423 1.29e-41 149
Msa0813200 MtrunA17_Chr5g0445381 35.211 284 150 7 2 258 183 459 2.57e-41 148
Msa0813200 MtrunA17_Chr1g0174471 32.877 292 157 8 4 259 164 452 2.61e-41 148
Msa0813200 MtrunA17_Chr3g0101651 31.359 287 159 5 4 258 153 433 3.05e-41 147
Msa0813200 MtrunA17_Chr1g0174451 32.432 296 155 8 2 259 149 437 3.09e-41 148
Msa0813200 MtrunA17_Chr8g0344181 38.725 204 113 5 60 259 240 435 4.13e-41 147
Msa0813200 MtrunA17_Chr3g0101581 33.916 286 148 8 6 258 153 430 1.24e-40 146
Msa0813200 MtrunA17_Chr5g0446161 32.394 284 152 9 5 259 157 429 1.73e-40 145
Msa0813200 MtrunA17_Chr3g0086691 31.834 289 157 5 2 255 144 427 2.40e-40 145
Msa0813200 MtrunA17_Chr1g0174441 31.419 296 160 8 2 259 168 458 2.68e-40 145
Msa0813200 MtrunA17_Chr8g0362481 32.993 294 142 9 4 255 80 360 5.59e-40 143
Msa0813200 MtrunA17_Chr5g0401681 39.901 203 107 4 47 249 230 417 7.16e-40 144
Msa0813200 MtrunA17_Chr2g0314731 32.042 284 159 5 5 259 148 426 7.68e-40 144
Msa0813200 MtrunA17_Chr3g0101611 39.827 231 118 5 41 258 209 431 8.60e-40 144
Msa0813200 MtrunA17_Chr4g0030701 31.379 290 152 6 2 251 147 429 9.78e-40 144
Msa0813200 MtrunA17_Chr5g0431511 29.097 299 160 6 1 259 145 431 1.15e-39 143
Msa0813200 MtrunA17_Chr5g0446151 32.056 287 156 8 2 259 154 430 1.20e-39 143
Msa0813200 MtrunA17_Chr5g0445531 33.451 284 154 7 2 258 152 427 1.29e-39 143
Msa0813200 MtrunA17_Chr5g0395321 31.915 282 153 7 5 259 157 426 1.99e-39 143
Msa0813200 MtrunA17_Chr4g0035921 32.609 276 142 9 20 254 164 436 5.05e-39 142
Msa0813200 MtrunA17_Chr4g0058211 47.328 131 68 1 129 259 18 147 6.02e-39 135
Msa0813200 MtrunA17_Chr3g0101751 35.395 291 147 6 2 259 155 437 6.67e-39 141
Msa0813200 MtrunA17_Chr7g0258221 38.034 234 132 6 30 255 201 429 7.58e-39 141
Msa0813200 MtrunA17_Chr4g0057001 36.364 209 123 4 53 259 245 445 8.54e-39 141
Msa0813200 MtrunA17_Chr7g0255531 38.298 188 105 3 73 259 248 425 9.55e-39 141
Msa0813200 MtrunA17_Chr1g0174461 31.757 296 157 9 2 259 148 436 1.21e-38 140
Msa0813200 MtrunA17_Chr4g0061381 38.009 221 128 4 30 250 208 419 1.26e-38 140
Msa0813200 MtrunA17_Chr8g0351801 40.909 198 100 6 68 255 243 433 1.57e-38 140
Msa0813200 MtrunA17_Chr7g0235551 37.755 196 112 4 60 251 234 423 2.39e-38 140
Msa0813200 MtrunA17_Chr4g0011881 34.256 289 153 6 2 259 143 425 2.43e-38 140
Msa0813200 MtrunA17_Chr3g0101801 36.082 291 141 7 4 259 157 437 2.74e-38 140
Msa0813200 MtrunA17_Chr8g0344191 37.449 243 134 9 15 250 226 457 3.54e-38 140
Msa0813200 MtrunA17_Chr4g0053621 38.776 196 108 4 54 249 238 421 3.91e-38 139
Msa0813200 MtrunA17_Chr2g0314721 31.959 291 150 9 5 259 159 437 5.56e-38 139
Msa0813200 MtrunA17_Chr1g0174481 38.049 205 115 5 60 259 234 431 5.98e-38 139
Msa0813200 MtrunA17_Chr5g0395331 39.881 168 93 2 92 259 274 433 1.06e-37 138
Msa0813200 MtrunA17_Chr3g0086651 39.286 224 125 5 31 250 206 422 1.66e-37 137
Msa0813200 MtrunA17_Chr3g0086661 39.286 224 125 5 31 250 206 422 1.86e-37 137
Msa0813200 MtrunA17_Chr6g0458561 38.095 189 107 4 63 250 268 447 2.31e-37 137
Msa0813200 MtrunA17_Chr1g0207841 31.208 298 148 8 2 253 150 436 3.83e-37 137
Msa0813200 MtrunA17_Chr5g0395381 40.845 142 83 1 118 259 261 401 4.05e-37 136
Msa0813200 MtrunA17_Chr5g0431501 29.352 293 167 4 1 259 145 431 7.97e-37 135
Msa0813200 MtrunA17_Chr5g0431461 29.352 293 167 4 1 259 145 431 7.97e-37 135
Msa0813200 MtrunA17_Chr8g0362701 31.058 293 149 9 4 255 149 429 9.54e-37 135
Msa0813200 MtrunA17_Chr1g0176831 29.617 287 162 6 5 259 178 456 1.08e-36 135
Msa0813200 MtrunA17_Chr4g0008101 39.216 204 112 6 51 250 248 443 1.17e-36 135
Msa0813200 MtrunA17_Chr1g0197891 31.834 289 150 9 5 259 149 424 1.57e-36 135
Msa0813200 MtrunA17_Chr7g0246121 31.724 290 152 9 5 258 149 428 1.93e-36 134
Msa0813200 MtrunA17_Chr5g0401691 36.181 199 115 4 51 249 246 432 3.69e-36 134
Msa0813200 MtrunA17_Chr1g0197881 31.488 289 151 9 5 259 148 423 3.70e-36 134
Msa0813200 MtrunA17_Chr6g0451781 38.308 201 112 6 54 250 284 476 4.20e-36 134
Msa0813200 MtrunA17_Chr7g0246221 29.655 290 161 6 5 258 149 431 5.90e-36 133
Msa0813200 MtrunA17_Chr1g0197871 30.450 289 154 9 5 259 149 424 6.05e-36 133
Msa0813200 MtrunA17_Chr6g0451751 37.436 195 112 4 60 250 255 443 6.64e-36 134
Msa0813200 MtrunA17_Chr7g0246151 34.921 189 119 2 70 258 246 430 9.41e-36 133
Msa0813200 MtrunA17_Chr3g0082701 38.579 197 109 4 60 250 254 444 1.25e-35 133
Msa0813200 MtrunA17_Chr1g0197851 31.142 289 152 9 5 259 149 424 1.81e-35 132
Msa0813200 MtrunA17_Chr1g0213671 38.350 206 120 6 56 259 236 436 1.92e-35 132
Msa0813200 MtrunA17_Chr8g0357431 34.859 284 155 4 2 258 150 430 2.40e-35 132
Msa0813200 MtrunA17_Chr1g0164211 29.474 285 164 7 5 259 146 423 2.77e-35 131
Msa0813200 MtrunA17_Chr6g0451691 33.333 258 140 8 2 250 213 447 2.83e-35 132
Msa0813200 MtrunA17_Chr5g0446101 35.000 200 121 4 60 259 52 242 4.01e-35 127
Msa0813200 MtrunA17_Chr4g0052881 40.212 189 102 4 61 249 241 418 4.09e-35 131
Msa0813200 MtrunA17_Chr4g0039391 30.389 283 156 6 1 249 147 422 4.19e-35 131
Msa0813200 MtrunA17_Chr7g0224551 30.822 292 157 8 2 258 143 424 4.32e-35 131
Msa0813200 MtrunA17_Chr2g0304871 40.933 193 106 5 60 250 248 434 1.18e-34 130
Msa0813200 MtrunA17_Chr6g0451641 36.041 197 115 4 63 255 252 441 1.72e-34 129
Msa0813200 MtrunA17_Chr1g0205361 27.682 289 164 9 5 259 149 426 1.78e-34 129
Msa0813200 MtrunA17_Chr4g0052861 38.798 183 105 2 70 252 245 420 1.97e-34 129
Msa0813200 MtrunA17_Chr7g0224561 30.137 292 159 8 2 258 143 424 3.12e-34 129
Msa0813200 MtrunA17_Chr8g0339331 36.508 189 113 4 63 250 252 434 3.97e-34 129
Msa0813200 MtrunA17_Chr1g0156081 32.895 304 150 6 2 259 169 464 9.20e-34 127
Msa0813200 MtrunA17_Chr5g0406651 41.748 206 103 5 60 259 232 426 9.64e-34 127
Msa0813200 MtrunA17_Chr7g0265611 38.164 207 119 5 56 259 246 446 1.06e-33 127
Msa0813200 MtrunA17_Chr4g0039901 28.223 287 166 6 5 259 150 428 1.32e-33 127
Msa0813200 MtrunA17_Chr8g0339311 30.952 252 156 6 10 250 197 441 2.62e-33 126
Msa0813200 MtrunA17_Chr8g0357421 34.028 288 151 6 2 258 150 429 4.45e-33 125
Msa0813200 MtrunA17_Chr6g0451681 39.752 161 83 3 94 250 246 396 6.57e-33 125
Msa0813200 MtrunA17_Chr6g0451741 38.119 202 112 6 54 250 272 465 1.77e-32 124
Msa0813200 MtrunA17_Chr4g0046351 41.509 159 74 3 110 251 264 420 2.66e-32 124
Msa0813200 MtrunA17_Chr6g0463621 50.833 120 57 2 130 249 1 118 2.97e-32 117
Msa0813200 MtrunA17_Chr8g0356001 35.185 162 101 2 98 259 278 435 3.77e-32 123
Msa0813200 MtrunA17_Chr1g0174431 46.032 126 66 2 130 255 1 124 4.29e-32 117
Msa0813200 MtrunA17_Chr4g0046321 31.967 244 138 7 22 251 191 420 8.90e-32 122
Msa0813200 MtrunA17_Chr6g0477081 40.299 134 75 1 109 237 105 238 1.83e-31 116
Msa0813200 MtrunA17_Chr4g0052851 34.211 190 114 3 60 249 230 408 2.27e-31 120
Msa0813200 MtrunA17_Chr3g0101591 43.846 130 72 1 129 258 38 166 2.75e-31 115
Msa0813200 MtrunA17_Chr2g0296651 28.125 288 154 7 2 249 143 417 6.20e-31 119
Msa0813200 MtrunA17_Chr6g0451811 41.600 125 72 1 126 250 1 124 7.56e-31 114
Msa0813200 MtrunA17_Chr1g0156061 40.306 196 103 4 70 259 209 396 1.01e-30 119
Msa0813200 MtrunA17_Chr8g0346261 33.466 251 138 10 20 256 236 471 1.21e-30 119
Msa0813200 MtrunA17_Chr1g0160851 26.736 288 168 7 5 259 149 426 2.35e-30 118
Msa0813200 MtrunA17_Chr6g0466901 38.265 196 110 5 60 250 247 436 2.41e-30 118
Msa0813200 MtrunA17_Chr2g0280261 32.292 288 154 8 2 259 147 423 2.80e-30 117
Msa0813200 MtrunA17_Chr4g0046331 40.252 159 76 3 110 251 264 420 2.89e-30 118
Msa0813200 MtrunA17_Chr7g0246131 29.720 286 167 4 5 258 149 432 3.49e-30 117
Msa0813200 MtrunA17_Chr2g0314781 42.982 114 64 1 146 259 1 113 5.43e-30 110
Msa0813200 MtrunA17_Chr4g0017411 43.307 127 71 1 123 249 280 405 5.68e-30 117
Msa0813200 MtrunA17_Chr2g0296661 39.796 196 107 5 54 249 238 422 1.32e-29 116
Msa0813200 MtrunA17_Chr6g0466941 37.563 197 111 5 60 250 247 437 1.81e-29 115
Msa0813200 MtrunA17_Chr4g0046631 37.696 191 111 3 60 250 256 438 4.71e-29 114
Msa0813200 MtrunA17_Chr1g0160861 31.500 200 123 5 63 259 79 267 5.70e-29 112
Msa0813200 MtrunA17_Chr5g0445761 50.000 130 64 1 130 259 1 129 6.18e-29 108
Msa0813200 MtrunA17_Chr6g0451771 41.791 134 73 2 121 250 9 141 1.27e-28 108
Msa0813200 MtrunA17_Chr1g0200951 35.437 206 111 7 51 251 260 448 2.60e-28 112
Msa0813200 MtrunA17_Chr4g0046681 42.149 121 69 1 130 250 31 150 3.06e-28 107
Msa0813200 MtrunA17_Chr8g0370641 29.843 191 125 3 61 251 258 439 1.69e-27 110
Msa0813200 MtrunA17_Chr5g0445371 35.751 193 88 5 66 258 2 158 3.57e-27 105
Msa0813200 MtrunA17_Chr5g0423621 41.228 114 66 1 146 259 1 113 1.44e-26 102
Msa0813200 MtrunA17_Chr5g0419451 31.373 204 125 5 60 259 257 449 2.25e-26 107
Msa0813200 MtrunA17_Chr5g0402981 45.946 111 58 2 141 250 3 112 2.88e-26 101
Msa0813200 MtrunA17_Chr1g0205371 29.167 288 161 6 5 259 150 427 2.24e-25 104
Msa0813200 MtrunA17_Chr1g0200961 33.649 211 126 4 54 259 225 426 2.29e-25 104
Msa0813200 MtrunA17_Chr8g0370651 27.749 191 129 3 61 251 262 443 3.71e-25 103
Msa0813200 MtrunA17_Chr3g0107551 36.585 123 77 1 129 251 4 125 4.09e-25 99.0
Msa0813200 MtrunA17_Chr8g0377341 29.915 234 149 6 30 259 236 458 9.93e-25 102
Msa0813200 MtrunA17_Chr7g0246181 35.678 199 117 4 61 258 242 430 1.07e-24 102
Msa0813200 MtrunA17_Chr1g0210091 37.500 144 88 2 110 253 314 455 2.83e-24 101
Msa0813200 MtrunA17_Chr3g0107541 31.210 157 101 2 95 251 297 446 2.94e-24 101
Msa0813200 MtrunA17_Chr8g0372591 32.000 125 84 1 128 252 1 124 3.29e-24 94.7
Msa0813200 MtrunA17_Chr5g0432751 38.235 136 83 1 118 253 292 426 3.59e-24 100
Msa0813200 MtrunA17_Chr8g0355961 36.420 162 99 2 98 259 278 435 4.82e-24 100
Msa0813200 MtrunA17_Chr5g0445351 47.525 101 52 1 158 258 52 151 6.84e-23 93.2
Msa0813200 MtrunA17_Chr3g0107611 25.439 228 155 4 31 251 232 451 8.45e-23 97.1
Msa0813200 MtrunA17_Chr1g0198191 38.281 128 77 2 125 252 311 436 8.30e-22 94.0
Msa0813200 MtrunA17_Chr4g0046661 41.860 129 74 1 121 249 16 143 1.32e-21 90.1
Msa0813200 MtrunA17_Chr3g0101541 51.220 82 39 1 178 259 1 81 1.76e-21 87.4
Msa0813200 MtrunA17_Chr3g0105761 34.746 118 74 2 131 248 1 115 2.22e-20 86.3
Msa0813200 MtrunA17_Chr1g0204271 31.293 147 92 2 119 256 289 435 2.13e-19 87.0
Msa0813200 MtrunA17_Chr8g0351391 29.932 147 94 1 119 256 294 440 4.72e-19 86.3
Msa0813200 MtrunA17_Chr3g0117301 45.570 79 42 1 181 259 1 78 3.79e-18 77.8
Msa0813200 MtrunA17_Chr2g0334021 29.534 193 117 6 66 255 252 428 3.85e-18 83.6
Msa0813200 MtrunA17_Chr4g0038271 25.417 240 157 4 27 251 254 486 4.75e-18 83.2
Msa0813200 MtrunA17_Chr2g0280011 33.594 128 79 2 129 251 7 133 6.32e-18 79.7
Msa0813200 MtrunA17_Chr4g0056981 48.611 72 37 0 156 227 1 72 1.44e-17 75.1
Msa0813200 MtrunA17_Chr2g0280061 34.375 128 78 2 129 251 7 133 1.76e-17 78.6
Msa0813200 MtrunA17_Chr8g0364651 29.379 177 109 4 82 256 261 423 1.96e-17 81.3
Msa0813200 MtrunA17_Chr4g0046701 48.101 79 40 1 172 250 1 78 2.31e-17 77.0
Msa0813200 MtrunA17_Chr8g0387101 36.000 125 73 3 133 251 304 427 2.56e-17 80.9
Msa0813200 MtrunA17_Chr5g0409051 33.333 129 84 2 129 256 307 434 3.35e-17 80.9
Msa0813200 MtrunA17_Chr2g0280081 23.843 281 182 5 2 251 647 926 4.70e-17 80.5
Msa0813200 MtrunA17_Chr2g0280081 34.375 128 78 2 129 251 299 425 3.95e-15 74.7
Msa0813200 MtrunA17_Chr6g0449351 23.744 219 161 2 38 253 175 390 5.27e-17 80.1
Msa0813200 MtrunA17_Chr8g0351311 28.671 143 93 1 119 252 295 437 6.76e-17 79.7
Msa0813200 MtrunA17_Chr2g0280121 35.938 128 76 2 129 251 305 431 8.68e-17 79.3
Msa0813200 MtrunA17_Chr7g0248991 26.316 285 161 10 1 249 80 351 9.08e-17 79.0
Msa0813200 MtrunA17_Chr6g0449361 24.434 221 157 3 38 253 215 430 1.03e-16 79.3
Msa0813200 MtrunA17_Chr3g0116731 46.575 73 38 1 181 253 1 72 1.38e-16 74.3
Msa0813200 MtrunA17_Chr6g0449381 25.847 236 159 5 27 253 204 432 1.58e-16 78.6
Msa0813200 MtrunA17_Chr0c19g0493771 34.959 123 77 3 127 249 450 569 1.69e-16 79.0
Msa0813200 MtrunA17_Chr8g0351401 23.902 205 141 3 58 251 235 435 2.84e-16 77.8
Msa0813200 MtrunA17_Chr5g0413911 31.618 136 89 2 118 250 315 449 4.62e-16 77.4
Msa0813200 MtrunA17_Chr5g0396521 30.675 163 97 5 102 255 323 478 6.44e-16 77.0
Msa0813200 MtrunA17_Chr4g0004481 25.342 292 169 8 1 253 138 419 8.79e-16 76.6
Msa0813200 MtrunA17_Chr4g0074581 29.630 162 106 2 89 250 308 461 2.05e-15 75.5
Msa0813200 MtrunA17_Chr2g0280041 34.127 126 77 2 129 249 331 455 2.82e-15 75.1
Msa0813200 MtrunA17_Chr8g0380501 28.947 152 102 2 107 253 268 418 3.70e-15 74.7
Msa0813200 MtrunA17_Chr6g0449331 25.294 170 123 2 87 253 274 442 5.34e-15 74.3
Msa0813200 MtrunA17_Chr1g0164321 21.825 252 171 4 27 259 236 480 5.66e-15 74.3
Msa0813200 MtrunA17_Chr6g0449341 24.378 201 143 3 61 253 291 490 9.34e-15 73.6
Msa0813200 MtrunA17_Chr5g0429651 26.562 192 126 4 70 251 245 431 1.74e-14 72.8
Msa0813200 MtrunA17_Chr5g0430171 79.661 59 12 0 1 59 148 206 1.90e-14 70.5
Msa0813200 MtrunA17_Chr1g0163451 29.221 154 105 1 104 253 298 451 2.02e-14 72.4
Msa0813200 MtrunA17_Chr8g0381571 27.225 191 121 6 67 249 238 418 2.07e-14 72.4
Msa0813200 MtrunA17_Chr8g0381541 27.225 191 121 6 67 249 238 418 2.55e-14 72.0
Msa0813200 MtrunA17_Chr2g0280071 30.469 128 83 2 129 251 332 458 3.57e-14 72.0
Msa0813200 MtrunA17_Chr6g0484771 59.322 59 23 1 1 59 77 134 4.31e-14 67.8
Msa0813200 MtrunA17_Chr7g0260831 27.320 194 119 6 64 251 244 421 4.67e-14 71.2
Msa0813200 MtrunA17_Chr8g0351421 29.730 148 92 3 114 250 288 434 4.93e-14 71.2
Msa0813200 MtrunA17_Chr1g0163281 23.767 223 155 4 38 253 232 446 4.98e-14 71.2
Msa0813200 MtrunA17_Chr4g0076171 38.889 108 44 3 146 253 1 86 5.36e-14 68.2
Msa0813200 MtrunA17_Chr3g0086681 42.308 78 44 1 173 250 8 84 1.60e-13 67.0
Msa0813200 MtrunA17_Chr3g0104351 26.562 192 126 4 70 251 251 437 1.99e-13 69.7
Msa0813200 MtrunA17_Chr8g0351461 28.378 148 94 3 114 250 287 433 2.50e-13 69.3
Msa0813200 MtrunA17_Chr7g0227291 27.749 191 125 4 67 253 240 421 2.84e-13 68.9
Msa0813200 MtrunA17_Chr8g0351441 29.801 151 88 4 114 250 287 433 3.67e-13 68.9
Msa0813200 MtrunA17_Chr7g0227281 26.087 161 111 2 97 253 265 421 5.93e-13 68.2
Msa0813200 MtrunA17_Chr1g0184421 25.694 144 100 2 119 258 294 434 6.13e-13 68.2
Msa0813200 MtrunA17_Chr8g0348751 24.460 278 173 7 11 251 157 434 6.61e-13 68.2
Msa0813200 MtrunA17_Chr1g0203141 27.941 204 125 6 65 257 262 454 7.79e-13 67.8
Msa0813200 MtrunA17_Chr7g0260821 28.462 130 88 2 123 251 297 422 8.46e-13 67.8
Msa0813200 MtrunA17_Chr1g0163421 29.252 147 100 1 111 253 321 467 9.17e-13 67.8
Msa0813200 MtrunA17_Chr5g0445361 52.542 59 27 1 200 258 8 65 1.32e-12 63.5
Msa0813200 MtrunA17_Chr5g0444981 37.190 121 74 2 139 259 20 138 1.41e-12 65.1
Msa0813200 MtrunA17_Chr1g0204241 28.696 115 77 1 147 256 112 226 2.43e-12 65.5
Msa0813200 MtrunA17_Chr1g0203151 27.000 200 132 6 65 257 258 450 2.70e-12 66.2
Msa0813200 MtrunA17_Chr1g0183611 27.517 149 100 2 111 253 206 352 2.73e-12 65.9
Msa0813200 MtrunA17_Chr1g0184461 26.207 145 98 3 119 258 294 434 4.58e-12 65.5
Msa0813200 MtrunA17_Chr1g0176851 30.952 168 98 6 23 184 79 234 6.30e-12 63.5
Msa0813200 MtrunA17_Chr1g0179811 32.812 128 74 4 127 249 341 461 7.29e-12 65.1
Msa0813200 MtrunA17_Chr7g0215181 24.632 272 165 9 13 254 181 442 7.37e-12 65.1
Msa0813200 MtrunA17_Chr4g0028321 46.552 58 30 1 197 254 24 80 9.52e-12 61.6
Msa0813200 MtrunA17_Chr7g0225531 27.692 130 92 2 123 251 306 434 1.13e-11 64.3
Msa0813200 MtrunA17_Chr4g0063221 21.756 262 162 7 24 251 193 445 1.40e-11 63.9
Msa0813200 MtrunA17_Chr1g0163431 22.000 200 147 2 58 253 197 391 3.22e-11 62.8
Msa0813200 MtrunA17_Chr4g0030741 27.174 184 93 6 2 153 175 349 4.46e-11 62.4
Msa0813200 MtrunA17_Chr4g0026941 21.320 197 139 3 58 251 281 464 5.76e-11 62.4
Msa0813200 MtrunA17_Chr1g0163351 22.870 223 158 4 38 252 215 431 9.40e-11 61.6
Msa0813200 MtrunA17_Chr6g0472221 25.397 189 136 3 62 250 268 451 9.92e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0813200 AT3G26330.1 37.586 290 139 8 4 259 145 426 3.41e-52 177
Msa0813200 AT3G48310.1 33.684 285 152 4 2 259 144 418 7.30e-52 176
Msa0813200 AT3G26210.1 36.207 290 148 7 2 258 143 428 3.36e-51 174
Msa0813200 AT3G48270.1 32.517 286 154 5 2 259 143 417 1.81e-50 172
Msa0813200 AT3G48300.1 33.333 285 153 4 2 259 141 415 1.79e-49 169
Msa0813200 AT3G48300.2 33.333 285 153 4 2 259 143 417 1.86e-49 169
Msa0813200 AT3G26320.1 35.593 295 142 8 2 259 143 426 2.45e-49 169
Msa0813200 AT3G48290.1 34.386 285 150 4 2 259 145 419 5.43e-49 168
Msa0813200 AT4G13310.1 36.237 287 144 6 5 259 147 426 1.41e-48 167
Msa0813200 AT3G26150.1 34.680 297 147 8 2 259 142 430 2.62e-48 167
Msa0813200 AT1G01280.1 36.525 282 132 7 6 248 148 421 6.82e-48 166
Msa0813200 AT3G26160.1 33.333 294 149 9 5 259 145 430 1.39e-47 165
Msa0813200 AT3G26310.1 37.282 287 144 8 4 259 144 425 2.44e-47 164
Msa0813200 AT5G06900.1 37.500 280 136 6 2 249 146 418 4.96e-47 164
Msa0813200 AT3G48280.1 31.930 285 158 4 2 259 142 417 1.24e-46 162
Msa0813200 AT3G26270.1 34.812 293 151 6 2 259 144 431 1.32e-46 162
Msa0813200 AT5G57260.1 37.113 291 143 9 4 259 144 429 2.01e-46 162
Msa0813200 AT3G26280.2 36.027 297 143 8 2 259 161 449 4.89e-46 161
Msa0813200 AT3G26280.1 36.027 297 143 8 2 259 144 432 5.23e-46 160
Msa0813200 AT4G13290.1 34.722 288 139 6 5 259 148 419 6.95e-46 160
Msa0813200 AT3G26230.1 36.486 296 143 9 2 258 138 427 1.68e-45 159
Msa0813200 AT1G13110.1 31.271 291 163 6 2 258 144 431 7.11e-45 157
Msa0813200 AT3G26300.1 46.154 182 89 4 83 259 249 426 1.12e-44 157
Msa0813200 AT3G20950.1 36.201 279 135 8 5 250 162 430 2.66e-44 156
Msa0813200 AT2G30770.1 30.450 289 162 4 2 259 145 425 4.09e-44 155
Msa0813200 AT3G48290.2 31.511 311 150 5 2 259 145 445 1.53e-43 154
Msa0813200 AT3G20940.1 34.767 279 140 7 5 250 158 427 3.44e-43 154
Msa0813200 AT5G25140.1 31.944 288 158 5 2 258 141 421 3.49e-43 153
Msa0813200 AT2G24180.1 39.196 199 116 3 60 258 238 431 3.61e-42 150
Msa0813200 AT5G07990.1 34.043 282 145 9 2 250 145 418 3.67e-42 150
Msa0813200 AT5G24950.1 31.250 288 160 4 2 258 144 424 4.14e-42 150
Msa0813200 AT3G20120.2 34.767 279 139 7 5 250 21 289 5.64e-42 147
Msa0813200 AT3G20120.3 34.767 279 139 7 5 250 21 289 5.64e-42 147
Msa0813200 AT3G20120.1 34.767 279 139 7 5 250 21 289 5.64e-42 147
Msa0813200 AT3G26180.2 39.109 202 111 6 62 259 103 296 9.21e-42 147
Msa0813200 AT1G13080.2 30.928 291 159 6 5 259 28 312 9.91e-42 147
Msa0813200 AT3G26180.1 31.650 297 156 8 2 259 142 430 1.29e-41 149
Msa0813200 AT4G31500.1 31.293 294 158 6 2 259 142 427 1.78e-41 149
Msa0813200 AT5G47990.1 32.975 279 144 6 5 250 158 426 4.94e-41 147
Msa0813200 AT1G13080.1 30.952 294 161 6 2 259 143 430 6.27e-41 147
Msa0813200 AT3G20120.4 34.767 279 139 7 5 250 157 425 7.84e-41 147
Msa0813200 AT3G26170.1 30.976 297 158 8 2 259 142 430 9.86e-41 147
Msa0813200 AT2G45570.1 43.976 166 85 3 94 259 280 437 1.21e-40 146
Msa0813200 AT5G25120.1 32.639 288 156 6 2 258 141 421 1.40e-40 146
Msa0813200 AT2G45550.1 42.857 168 88 3 92 259 277 436 1.50e-40 146
Msa0813200 AT5G25180.1 38.191 199 116 4 60 258 230 421 1.81e-40 145
Msa0813200 AT1G13090.2 29.795 292 164 7 2 258 140 425 6.56e-40 144
Msa0813200 AT1G50560.1 33.096 281 149 6 5 254 162 434 7.20e-40 144
Msa0813200 AT4G20240.1 31.944 288 152 7 2 256 145 421 1.17e-39 143
Msa0813200 AT3G48320.1 33.217 286 152 5 2 259 144 418 2.30e-39 142
Msa0813200 AT2G42250.1 43.529 170 89 4 90 259 272 434 2.44e-39 143
Msa0813200 AT3G61040.1 43.605 172 88 4 88 258 261 424 3.05e-39 142
Msa0813200 AT4G12300.1 38.693 199 116 3 53 251 239 431 3.43e-39 142
Msa0813200 AT1G33720.4 36.967 211 117 3 56 258 101 303 4.59e-39 140
Msa0813200 AT1G33720.3 36.967 211 117 3 56 258 101 303 4.59e-39 140
Msa0813200 AT1G33720.5 36.967 211 117 3 56 258 101 303 4.59e-39 140
Msa0813200 AT1G33730.1 30.928 291 155 6 5 258 18 299 5.82e-39 139
Msa0813200 AT1G33730.2 30.928 291 155 6 5 258 18 299 5.82e-39 139
Msa0813200 AT1G66540.2 41.711 187 99 4 63 249 67 243 6.21e-39 138
Msa0813200 AT2G45560.1 42.262 168 88 3 92 259 278 436 7.10e-39 142
Msa0813200 AT3G28740.1 43.386 189 93 6 66 253 251 426 1.07e-38 141
Msa0813200 AT4G15350.1 33.935 277 145 6 5 250 151 420 1.94e-38 140
Msa0813200 AT1G66540.1 41.711 187 99 4 63 249 126 302 2.44e-38 138
Msa0813200 AT3G20935.1 37.449 243 117 9 32 250 21 252 3.51e-38 137
Msa0813200 AT3G26830.1 36.816 201 120 5 60 259 232 426 3.81e-38 139
Msa0813200 AT1G33720.1 36.967 211 117 3 56 258 233 435 4.94e-38 139
Msa0813200 AT1G11610.1 29.758 289 164 4 2 259 145 425 8.27e-38 139
Msa0813200 AT4G37340.1 39.474 190 105 4 60 249 236 415 8.58e-38 139
Msa0813200 AT3G32047.1 32.526 289 147 9 1 250 146 425 1.00e-37 138
Msa0813200 AT1G11610.2 29.758 289 164 4 2 259 145 425 1.09e-37 138
Msa0813200 AT1G13100.1 29.452 292 168 5 2 258 137 425 1.58e-37 138
Msa0813200 AT3G20080.4 32.491 277 149 8 5 250 21 290 1.75e-37 135
Msa0813200 AT3G20080.5 32.491 277 149 8 5 250 21 290 1.75e-37 135
Msa0813200 AT3G20080.6 32.491 277 149 8 5 250 21 290 1.75e-37 135
Msa0813200 AT3G20080.3 32.491 277 149 8 5 250 21 290 1.75e-37 135
Msa0813200 AT4G37310.1 39.196 199 108 6 54 249 235 423 1.75e-37 138
Msa0813200 AT4G36220.1 30.420 286 152 8 7 251 156 435 2.08e-37 138
Msa0813200 AT5G35715.1 26.962 293 176 6 1 259 77 365 2.21e-37 137
Msa0813200 AT4G12320.1 35.577 208 116 5 53 253 239 435 2.40e-37 137
Msa0813200 AT4G13770.1 30.375 293 160 6 2 258 143 427 2.42e-37 137
Msa0813200 AT4G37410.1 33.813 278 139 7 5 249 147 412 2.67e-37 137
Msa0813200 AT4G31940.1 40.099 202 108 6 54 250 244 437 3.17e-37 137
Msa0813200 AT3G20130.2 32.258 279 146 8 5 250 130 398 3.22e-37 137
Msa0813200 AT2G14100.1 30.796 289 153 8 1 250 147 427 3.60e-37 137
Msa0813200 AT2G02580.1 36.897 290 141 8 4 259 145 426 3.66e-37 137
Msa0813200 AT5G36220.2 40.761 184 98 3 66 249 103 275 3.95e-37 134
Msa0813200 AT4G12330.1 29.630 297 156 7 2 259 160 442 4.37e-37 137
Msa0813200 AT3G26290.1 36.458 288 145 6 4 259 145 426 4.92e-37 137
Msa0813200 AT2G40890.1 38.298 188 105 3 73 259 247 424 4.98e-37 137
Msa0813200 AT3G20130.1 32.258 279 146 8 5 250 158 426 5.03e-37 137
Msa0813200 AT1G50520.1 36.869 198 114 5 56 250 240 429 6.09e-37 137
Msa0813200 AT3G26290.2 36.458 288 145 6 4 259 158 439 6.21e-37 136
Msa0813200 AT5G42580.1 33.712 264 148 6 6 250 156 411 8.19e-37 136
Msa0813200 AT4G22710.1 33.493 209 129 4 51 258 249 448 8.33e-37 136
Msa0813200 AT3G20080.2 32.491 277 149 8 5 250 158 427 8.84e-37 136
Msa0813200 AT3G20080.1 32.491 277 149 8 5 250 158 427 8.84e-37 136
Msa0813200 AT4G22690.1 33.493 209 129 4 51 258 280 479 1.07e-36 136
Msa0813200 AT3G20140.1 32.130 277 149 7 5 250 158 426 1.20e-36 135
Msa0813200 AT4G15380.1 38.798 183 105 4 68 250 247 422 1.26e-36 135
Msa0813200 AT4G37400.1 39.674 184 99 4 66 249 239 410 1.34e-36 135
Msa0813200 AT5G36220.1 40.761 184 98 3 66 249 249 421 4.60e-36 134
Msa0813200 AT5G44620.1 28.669 293 159 7 5 258 161 442 4.75e-36 134
Msa0813200 AT2G30750.1 37.811 201 116 3 60 259 233 425 4.96e-36 134
Msa0813200 AT1G28430.1 37.681 207 116 7 56 259 235 431 5.88e-36 134
Msa0813200 AT2G45580.2 41.104 163 90 3 97 259 127 283 6.37e-36 131
Msa0813200 AT3G20110.1 40.323 186 103 5 68 253 249 426 6.48e-36 134
Msa0813200 AT2G05180.1 34.173 278 143 7 5 250 157 426 1.18e-35 132
Msa0813200 AT4G37370.1 39.674 184 100 4 66 249 242 414 1.19e-35 133
Msa0813200 AT4G12310.1 34.328 201 128 3 53 253 241 437 1.27e-35 133
Msa0813200 AT5G67310.1 37.755 196 112 4 54 249 241 426 1.82e-35 132
Msa0813200 AT5G04330.1 32.342 269 140 8 20 250 159 423 3.22e-35 132
Msa0813200 AT2G23190.1 36.364 231 129 6 29 255 249 465 3.65e-35 132
Msa0813200 AT5G25130.1 30.903 288 161 5 2 258 141 421 3.99e-35 131
Msa0813200 AT2G45580.1 41.104 163 90 3 97 259 281 437 5.91e-35 131
Msa0813200 AT3G20100.1 39.344 183 104 4 68 250 251 426 1.00e-34 130
Msa0813200 AT5G06905.1 31.633 294 155 10 5 259 146 432 1.15e-34 130
Msa0813200 AT5G57220.1 39.474 190 103 4 60 249 233 410 1.39e-34 130
Msa0813200 AT4G37320.1 31.673 281 148 7 2 249 146 415 1.59e-34 130
Msa0813200 AT4G31950.1 40.291 206 110 6 50 250 228 425 3.01e-34 129
Msa0813200 AT3G26220.1 33.562 292 157 5 2 258 141 430 3.72e-34 129
Msa0813200 AT4G31970.1 36.765 204 120 4 50 250 239 436 4.13e-34 129
Msa0813200 AT2G27000.1 32.616 279 146 7 5 250 155 424 4.83e-34 129
Msa0813200 AT3G20090.1 36.612 183 109 4 68 250 115 290 5.48e-34 126
Msa0813200 AT1G33720.2 45.385 130 70 1 129 258 200 328 1.06e-33 126
Msa0813200 AT4G37330.1 33.088 272 147 7 5 249 149 412 1.19e-33 127
Msa0813200 AT4G37430.1 34.483 232 133 7 24 249 197 415 1.28e-33 127
Msa0813200 AT3G20090.2 36.612 183 109 4 68 250 253 428 3.01e-33 126
Msa0813200 AT4G13310.2 34.263 251 126 6 5 223 147 390 4.18e-33 124
Msa0813200 AT3G25180.1 31.119 286 159 7 1 253 152 432 4.99e-33 126
Msa0813200 AT2G23220.1 34.211 228 138 5 29 255 220 436 7.16e-33 125
Msa0813200 AT4G15330.2 30.952 294 154 8 5 257 126 411 1.19e-32 124
Msa0813200 AT4G15330.1 30.952 294 154 8 5 257 154 439 1.43e-32 124
Msa0813200 AT4G15360.1 38.172 186 103 5 68 250 250 426 4.17e-32 123
Msa0813200 AT3G20960.1 38.342 193 108 6 68 259 148 330 4.19e-32 122
Msa0813200 AT1G01190.1 36.842 190 103 5 65 253 279 452 4.62e-32 123
Msa0813200 AT3G26190.1 30.375 293 164 7 2 259 140 427 5.11e-32 123
Msa0813200 AT5G42590.1 32.746 284 155 5 6 259 148 425 5.12e-32 123
Msa0813200 AT1G01190.2 36.842 190 103 5 65 253 284 457 5.45e-32 123
Msa0813200 AT1G74550.1 40.580 138 81 1 122 259 275 411 1.07e-31 122
Msa0813200 AT3G26200.1 30.034 293 165 6 2 259 140 427 1.10e-31 122
Msa0813200 AT3G20960.2 38.342 193 108 6 68 259 251 433 1.21e-31 122
Msa0813200 AT4G37360.1 37.500 184 105 4 66 249 242 415 5.80e-31 120
Msa0813200 AT2G27010.1 31.159 276 147 8 6 250 139 402 1.43e-30 119
Msa0813200 AT5G24960.1 41.294 201 108 4 60 258 233 425 1.68e-30 119
Msa0813200 AT2G25160.1 36.598 194 109 6 63 250 248 433 1.09e-29 117
Msa0813200 AT5G10600.1 45.736 129 69 1 123 251 305 432 2.88e-29 115
Msa0813200 AT2G46660.1 34.951 206 116 6 49 253 262 450 3.24e-29 115
Msa0813200 AT4G20240.2 32.308 260 130 8 2 228 145 391 3.78e-29 114
Msa0813200 AT5G10610.1 45.669 127 68 1 123 249 289 414 4.67e-29 115
Msa0813200 AT1G74540.1 39.130 138 83 1 122 259 281 417 5.04e-29 114
Msa0813200 AT2G30490.1 41.667 144 83 1 110 253 283 425 1.20e-28 114
Msa0813200 AT4G39950.1 30.472 233 147 6 24 250 229 452 1.63e-28 113
Msa0813200 AT4G39950.2 30.472 233 147 6 24 250 269 492 1.80e-28 114
Msa0813200 AT3G53300.1 30.000 290 169 8 2 259 140 427 1.90e-28 113
Msa0813200 AT5G05260.2 30.364 247 153 7 14 251 207 443 1.94e-28 113
Msa0813200 AT2G22330.1 35.669 157 94 3 94 250 305 454 2.64e-28 113
Msa0813200 AT2G22330.2 35.669 157 94 3 94 250 328 477 2.71e-28 113
Msa0813200 AT3G61880.1 36.316 190 108 5 65 253 273 450 3.29e-28 112
Msa0813200 AT3G53280.1 28.179 291 171 7 2 259 140 425 3.77e-28 112
Msa0813200 AT3G61880.2 36.316 190 108 5 65 253 273 450 6.41e-28 112
Msa0813200 AT5G05260.1 37.241 145 88 2 107 251 270 411 6.72e-28 111
Msa0813200 AT3G52970.1 41.250 160 89 4 94 251 276 432 1.33e-27 110
Msa0813200 AT3G52970.2 41.250 160 89 4 94 251 290 446 1.45e-27 110
Msa0813200 AT5G09970.1 39.500 200 100 8 58 249 270 456 3.13e-27 110
Msa0813200 AT1G74110.1 35.176 199 111 6 60 250 269 457 3.15e-26 107
Msa0813200 AT1G16400.1 32.911 158 99 2 94 251 295 445 5.88e-26 106
Msa0813200 AT3G44250.1 39.157 166 96 3 95 259 265 426 1.22e-25 105
Msa0813200 AT1G79370.1 36.943 157 92 3 94 250 304 453 2.53e-25 104
Msa0813200 AT3G61040.2 44.538 119 59 2 88 206 261 372 3.00e-25 103
Msa0813200 AT1G58260.1 31.646 158 101 3 94 251 287 437 2.75e-24 101
Msa0813200 AT1G13710.1 29.048 210 133 6 54 259 248 445 1.21e-23 99.8
Msa0813200 AT1G65340.1 28.814 236 146 7 27 251 204 428 3.58e-23 98.2
Msa0813200 AT1G16410.1 31.646 158 101 2 94 251 296 446 4.20e-23 98.2
Msa0813200 AT5G35917.1 32.544 169 90 7 91 257 294 440 1.32e-21 94.0
Msa0813200 AT1G64940.1 32.934 167 102 4 94 258 280 438 3.79e-21 92.4
Msa0813200 AT2G25160.2 34.752 141 87 3 63 202 248 384 6.40e-21 91.7
Msa0813200 AT2G45580.3 37.795 127 74 2 97 223 281 402 6.85e-21 91.3
Msa0813200 AT5G52320.2 28.000 200 131 5 58 251 235 427 1.06e-20 91.3
Msa0813200 AT5G52320.1 28.000 200 131 5 58 251 235 427 1.19e-20 91.3
Msa0813200 AT5G04630.1 38.136 118 72 1 133 250 311 427 5.60e-20 89.4
Msa0813200 AT1G16410.2 34.677 124 75 1 94 217 296 413 9.89e-20 88.2
Msa0813200 AT3G25180.2 29.084 251 139 8 1 217 152 397 2.19e-19 87.0
Msa0813200 AT1G64930.1 33.962 159 95 4 94 250 278 428 2.46e-19 87.4
Msa0813200 AT5G04660.1 36.364 121 76 1 133 253 314 433 2.52e-19 87.4
Msa0813200 AT5G25900.1 26.136 264 146 8 25 251 181 432 6.12e-19 86.3
Msa0813200 AT5G24960.2 39.098 133 71 4 60 190 233 357 1.27e-18 84.7
Msa0813200 AT3G10560.1 32.639 144 94 3 110 253 294 434 3.28e-18 84.0
Msa0813200 AT1G57750.1 25.510 196 136 4 58 251 234 421 7.28e-18 83.2
Msa0813200 AT1G57750.2 25.510 196 136 4 58 251 234 421 7.51e-18 82.8
Msa0813200 AT3G53290.1 29.259 270 174 7 2 259 70 334 2.69e-17 80.9
Msa0813200 AT3G10570.1 33.333 129 84 2 125 253 308 434 3.03e-17 81.3
Msa0813200 AT3G03470.1 30.000 160 107 2 96 251 269 427 4.85e-17 80.5
Msa0813200 AT1G64950.1 33.577 137 89 2 123 258 302 437 2.39e-16 78.6
Msa0813200 AT3G26125.1 26.316 209 133 4 60 251 254 458 3.37e-16 78.2
Msa0813200 AT2G12190.1 34.884 129 82 2 123 250 302 429 1.76e-15 75.9
Msa0813200 AT1G31800.1 34.959 123 77 3 127 249 371 490 2.94e-15 75.5
Msa0813200 AT4G39490.1 26.667 150 97 1 119 255 296 445 3.30e-15 75.1
Msa0813200 AT1G13140.1 21.757 239 170 3 26 251 216 450 4.19e-15 75.1
Msa0813200 AT1G11600.1 28.866 194 124 3 70 250 235 427 5.22e-15 74.7
Msa0813200 AT3G56630.1 30.370 135 89 2 123 252 288 422 1.14e-14 73.6
Msa0813200 AT1G24540.1 27.528 178 112 5 90 252 272 447 1.26e-14 73.6
Msa0813200 AT5G02900.1 25.214 234 161 5 23 252 181 404 1.51e-14 73.2
Msa0813200 AT2G44890.2 29.496 139 88 1 123 251 291 429 1.72e-14 73.2
Msa0813200 AT2G44890.1 29.496 139 88 1 123 251 295 433 1.87e-14 73.2
Msa0813200 AT2G23180.1 23.318 223 153 6 39 252 225 438 2.12e-14 72.8
Msa0813200 AT1G01600.1 25.962 208 133 3 58 251 237 437 3.00e-14 72.4
Msa0813200 AT2G45510.1 28.058 139 90 1 123 251 295 433 3.19e-14 72.4
Msa0813200 AT1G34540.1 28.148 135 92 2 123 252 288 422 3.42e-14 72.4
Msa0813200 AT5G63450.1 23.404 282 178 6 5 256 153 426 4.63e-14 72.0
Msa0813200 AT5G63450.2 23.404 282 178 6 5 256 211 484 6.46e-14 71.6
Msa0813200 AT1G13140.2 27.536 138 91 1 123 251 287 424 6.60e-14 71.2
Msa0813200 AT4G15110.1 27.778 198 122 8 70 253 294 484 7.36e-14 71.2
Msa0813200 AT1G13150.1 27.536 138 91 1 123 251 306 443 7.90e-14 71.2
Msa0813200 AT2G21910.1 28.934 197 121 8 63 253 249 432 9.79e-14 70.9
Msa0813200 AT3G53130.1 31.707 123 82 2 127 249 341 461 2.66e-13 69.7
Msa0813200 AT5G24900.2 26.636 214 132 8 44 251 142 336 2.73e-13 69.3
Msa0813200 AT1G47620.1 22.083 240 164 5 27 252 211 441 2.76e-13 69.7
Msa0813200 AT4G39480.1 24.571 175 104 2 106 252 265 439 2.94e-13 69.3
Msa0813200 AT5G23190.1 24.370 238 162 5 26 250 233 465 2.97e-13 69.7
Msa0813200 AT4G39500.1 28.148 135 97 0 119 253 259 393 4.12e-13 68.9
Msa0813200 AT4G39500.2 28.148 135 97 0 119 253 309 443 4.79e-13 68.9
Msa0813200 AT5G24900.1 26.636 214 132 8 44 251 259 453 4.86e-13 68.9
Msa0813200 AT4G00360.1 26.341 205 124 5 61 251 244 435 5.47e-13 68.6
Msa0813200 AT4G32170.1 23.509 285 163 7 13 252 155 429 8.59e-13 68.2
Msa0813200 AT2G26710.1 24.528 265 176 8 7 249 177 439 2.82e-12 66.6
Msa0813200 AT2G45970.1 25.243 206 135 4 59 253 238 435 3.92e-12 66.2
Msa0813200 AT5G61320.1 26.415 212 123 7 42 250 226 407 4.86e-12 65.9
Msa0813200 AT5G08250.1 22.363 237 167 4 27 250 169 401 1.44e-11 64.3
Msa0813200 AT1G63710.1 28.472 144 85 4 123 252 295 434 1.55e-11 64.3
Msa0813200 AT1G19630.2 28.889 180 114 5 74 249 235 404 1.57e-11 64.3
Msa0813200 AT5G52400.1 27.407 135 89 3 130 257 326 458 1.82e-11 64.3
Msa0813200 AT1G19630.3 28.962 183 116 5 74 252 235 407 2.00e-11 63.9
Msa0813200 AT1G19630.1 28.962 183 116 5 74 252 235 407 2.02e-11 63.9
Msa0813200 AT5G08250.2 21.667 240 165 5 27 250 231 463 2.36e-11 63.9
Msa0813200 AT5G24910.1 27.219 169 109 5 89 251 298 458 3.83e-11 63.2
Msa0813200 AT4G39510.1 22.414 290 176 7 6 252 148 431 5.70e-11 62.8

Find 42 sgRNAs with CRISPR-Local

Find 196 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATAGTAAATGTATGGGCAAT+AGG 0.287337 5_3:+43727061 Msa0813200:CDS
TCAATTTGACTTGAAGAGTT+TGG 0.324324 5_3:+43725600 Msa0813200:CDS
TTGAGATGTTTGGTCCTATT+AGG 0.337546 5_3:+43725440 None:intergenic
GTCATTGGAGAAAGCTGCTT+TGG 0.368667 5_3:+43725489 Msa0813200:CDS
CACGACTTATAGTAAATGTA+TGG 0.393402 5_3:+43727053 Msa0813200:CDS
CACCCTCGACATCAATGGTT+TGG 0.411210 5_3:-43726706 None:intergenic
TGCTACTGGGTGAAGTCTTA+AGG 0.413199 5_3:-43726963 None:intergenic
GGTTCGAAAGTTGAGATGTT+TGG 0.421216 5_3:+43725430 None:intergenic
TAGGGAGAGATTGTAATGTT+TGG 0.431904 5_3:+43727080 Msa0813200:CDS
TCCTATTAGGAAGGAAAAGT+TGG 0.442380 5_3:+43725453 Msa0813200:CDS
CATCTGCTACCTCAATTGAA+TGG 0.445750 5_3:+43726801 Msa0813200:CDS
GGGACTAGTAACGGTGCTAC+TGG 0.458462 5_3:-43726977 None:intergenic
ATCTGCTACCTCAATTGAAT+GGG 0.471684 5_3:+43726802 Msa0813200:CDS
GAAAGCTGCTTTGGTGGGTG+AGG 0.471909 5_3:+43725498 Msa0813200:CDS
TTGTTCACCCTCGACATCAA+TGG 0.474590 5_3:-43726711 None:intergenic
AGAGGGAGCACAACAATTGA+TGG 0.474959 5_3:+43727010 Msa0813200:CDS
ATTGTGTATAAGATGGTGTT+TGG 0.475302 5_3:+43725562 Msa0813200:CDS
TAGTAAATGTATGGGCAATA+GGG 0.476282 5_3:+43727062 Msa0813200:CDS
TAAAAGAATGGTTGACGAGA+AGG 0.500216 5_3:+43726898 Msa0813200:CDS
AGATAAAGCCCATTCAATTG+AGG 0.525422 5_3:-43726810 None:intergenic
GATGAGATACAAAATGAAGT+AGG 0.525470 5_3:+43726872 Msa0813200:CDS
AGAGGATATTGTGTATAAGA+TGG 0.533968 5_3:+43725555 Msa0813200:CDS
TGAAGTAGGAAATAAAAGAA+TGG 0.548804 5_3:+43726886 Msa0813200:CDS
ATTGGAGAAAGCTGCTTTGG+TGG 0.552835 5_3:+43725492 Msa0813200:CDS
ATTAAATTATTTAGACATGG+TGG 0.553569 5_3:+43726931 Msa0813200:CDS
GATGTTTGGTCCTATTAGGA+AGG 0.561654 5_3:+43725444 None:intergenic
TGTATAAGATGGTGTTTGGT+CGG 0.567631 5_3:+43725566 Msa0813200:CDS
GTGCTCCCTCTAGATTCATG+AGG 0.574439 5_3:-43726998 None:intergenic
GAAATTAAATTATTTAGACA+TGG 0.574902 5_3:+43726928 Msa0813200:CDS
CATTGATCGAACTAACATCA+AGG 0.575514 5_3:+43726742 Msa0813200:CDS
CTAGTCCCTCATGAATCTAG+AGG 0.579014 5_3:+43726992 Msa0813200:CDS
GGACTAGTAACGGTGCTACT+GGG 0.589236 5_3:-43726976 None:intergenic
CACCAAACCATTGATGTCGA+GGG 0.592553 5_3:+43726704 Msa0813200:CDS
GCACCAAACCATTGATGTCG+AGG 0.596252 5_3:+43726703 Msa0813200:CDS
AGTTGTAGAAAATCTTATAG+AGG 0.598740 5_3:+43725537 Msa0813200:CDS
TGCTCCCTCTAGATTCATGA+GGG 0.603878 5_3:-43726997 None:intergenic
TTGGAGAAAGCTGCTTTGGT+GGG 0.605876 5_3:+43725493 Msa0813200:CDS
ACGACTTATAGTAAATGTAT+GGG 0.615716 5_3:+43727054 Msa0813200:CDS
AGCAATTGATGAGGTGCTAG+AGG 0.622173 5_3:+43726601 Msa0813200:CDS
GATTCATGAGGGACTAGTAA+CGG 0.627285 5_3:-43726986 None:intergenic
TAGTCCCTCATGAATCTAGA+GGG 0.632966 5_3:+43726993 Msa0813200:CDS
AGTCAGTAAAGCAATTGATG+AGG 0.660893 5_3:+43726592 Msa0813200:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TGAAAAATAGTTTTATAAAA+GGG - chr5_3:43725816-43725835 None:intergenic 10.0%
!!! ATGAAAAATAGTTTTATAAA+AGG - chr5_3:43725817-43725836 None:intergenic 10.0%
!!! TAAATTATAAGTTTTTTTAG+GGG - chr5_3:43725962-43725981 None:intergenic 10.0%
!!! CTAAATTATAAGTTTTTTTA+GGG - chr5_3:43725963-43725982 None:intergenic 10.0%
!! AATTATCAAGAATAAATAAA+GGG - chr5_3:43726243-43726262 None:intergenic 10.0%
!! AAATTATCAAGAATAAATAA+AGG - chr5_3:43726244-43726263 None:intergenic 10.0%
!!! ATTTATTCTTGATAATTTTA+TGG + chr5_3:43726246-43726265 Msa0813200:intron 10.0%
!!! TGAAAAATAGTTTTATAAAA+GGG - chr5_3:43725816-43725835 None:intergenic 10.0%
!!! ATGAAAAATAGTTTTATAAA+AGG - chr5_3:43725817-43725836 None:intergenic 10.0%
!!! TAAATTATAAGTTTTTTTAG+GGG - chr5_3:43725962-43725981 None:intergenic 10.0%
!!! CTAAATTATAAGTTTTTTTA+GGG - chr5_3:43725963-43725982 None:intergenic 10.0%
!! AATTATCAAGAATAAATAAA+GGG - chr5_3:43726243-43726262 None:intergenic 10.0%
!! AAATTATCAAGAATAAATAA+AGG - chr5_3:43726244-43726263 None:intergenic 10.0%
!!! ATTTATTCTTGATAATTTTA+TGG + chr5_3:43726246-43726265 Msa0813200:intron 10.0%
!!! AAATTATAAGTTTTTTTAGG+GGG - chr5_3:43725961-43725980 None:intergenic 15.0%
!!! CCTAAATTATAAGTTTTTTT+AGG - chr5_3:43725964-43725983 None:intergenic 15.0%
!! CCTAAAAAAACTTATAATTT+AGG + chr5_3:43725961-43725980 Msa0813200:intron 15.0%
!! ATTATCAAGAATAAATAAAG+GGG - chr5_3:43726242-43726261 None:intergenic 15.0%
!!! AATCGATAACAATATTTTTA+AGG - chr5_3:43726366-43726385 None:intergenic 15.0%
!! GAAATTAAATTATTTAGACA+TGG + chr5_3:43726928-43726947 Msa0813200:CDS 15.0%
!!! AATTGATGGTTATTTTATAA+AGG + chr5_3:43727024-43727043 Msa0813200:CDS 15.0%
!!! AAATTATAAGTTTTTTTAGG+GGG - chr5_3:43725961-43725980 None:intergenic 15.0%
!!! CCTAAATTATAAGTTTTTTT+AGG - chr5_3:43725964-43725983 None:intergenic 15.0%
!! CCTAAAAAAACTTATAATTT+AGG + chr5_3:43725961-43725980 Msa0813200:intron 15.0%
!! ATTATCAAGAATAAATAAAG+GGG - chr5_3:43726242-43726261 None:intergenic 15.0%
!!! AATCGATAACAATATTTTTA+AGG - chr5_3:43726366-43726385 None:intergenic 15.0%
!! GAAATTAAATTATTTAGACA+TGG + chr5_3:43726928-43726947 Msa0813200:CDS 15.0%
!!! AATTGATGGTTATTTTATAA+AGG + chr5_3:43727024-43727043 Msa0813200:CDS 15.0%
!!! TTCAAATTTCTTCTACTTTT+AGG - chr5_3:43726208-43726227 None:intergenic 20.0%
!!! GTTTAAGCTTTAAAAATGAA+AGG + chr5_3:43726289-43726308 Msa0813200:intron 20.0%
!! TTTAAAAAAACATGCTCTAA+TGG + chr5_3:43726481-43726500 Msa0813200:intron 20.0%
!!! TTATGTTTTAACTCATTGTT+AGG + chr5_3:43726547-43726566 Msa0813200:intron 20.0%
!!! TATGTTTTAACTCATTGTTA+GGG + chr5_3:43726548-43726567 Msa0813200:intron 20.0%
!! ATTAAATTATTTAGACATGG+TGG + chr5_3:43726931-43726950 Msa0813200:CDS 20.0%
!! GAGAAAAAAATGAATTATCT+CGG + chr5_3:43727142-43727161 Msa0813200:CDS 20.0%
!!! TTCAAATTTCTTCTACTTTT+AGG - chr5_3:43726208-43726227 None:intergenic 20.0%
!!! GTTTAAGCTTTAAAAATGAA+AGG + chr5_3:43726289-43726308 Msa0813200:intron 20.0%
!! TTTAAAAAAACATGCTCTAA+TGG + chr5_3:43726481-43726500 Msa0813200:intron 20.0%
!!! TTATGTTTTAACTCATTGTT+AGG + chr5_3:43726547-43726566 Msa0813200:intron 20.0%
!!! TATGTTTTAACTCATTGTTA+GGG + chr5_3:43726548-43726567 Msa0813200:intron 20.0%
!! ATTAAATTATTTAGACATGG+TGG + chr5_3:43726931-43726950 Msa0813200:CDS 20.0%
!! GAGAAAAAAATGAATTATCT+CGG + chr5_3:43727142-43727161 Msa0813200:CDS 20.0%
! AGTTGTAGAAAATCTTATAG+AGG + chr5_3:43725537-43725556 Msa0813200:CDS 25.0%
! ATTTGACAAAATATACCTGA+AGG - chr5_3:43725696-43725715 None:intergenic 25.0%
! AAACTTATAATTTAGGAGTG+AGG + chr5_3:43725968-43725987 Msa0813200:intron 25.0%
! AACTTATAATTTAGGAGTGA+GGG + chr5_3:43725969-43725988 Msa0813200:intron 25.0%
! AAGTCAATAAGTTATGTACA+TGG - chr5_3:43725999-43726018 None:intergenic 25.0%
! TTTCACAATCTCAATATTTG+AGG + chr5_3:43726173-43726192 Msa0813200:intron 25.0%
!!! GTTATCGATTTTTTAAATGC+AGG + chr5_3:43726376-43726395 Msa0813200:intron 25.0%
!!! TTTTTTAAATGCAGGTTAGT+TGG + chr5_3:43726384-43726403 Msa0813200:intron 25.0%
!!! AGAGCATGTTTTTTTAAAAG+AGG - chr5_3:43726479-43726498 None:intergenic 25.0%
! TGAAGTAGGAAATAAAAGAA+TGG + chr5_3:43726886-43726905 Msa0813200:CDS 25.0%
! ACGACTTATAGTAAATGTAT+GGG + chr5_3:43727054-43727073 Msa0813200:CDS 25.0%
!! TTTTCTCAATAAATCTCTCT+GGG - chr5_3:43727129-43727148 None:intergenic 25.0%
!! TTTTTCTCAATAAATCTCTC+TGG - chr5_3:43727130-43727149 None:intergenic 25.0%
! AGTTGTAGAAAATCTTATAG+AGG + chr5_3:43725537-43725556 Msa0813200:CDS 25.0%
! ATTTGACAAAATATACCTGA+AGG - chr5_3:43725696-43725715 None:intergenic 25.0%
! AAACTTATAATTTAGGAGTG+AGG + chr5_3:43725968-43725987 Msa0813200:intron 25.0%
! AACTTATAATTTAGGAGTGA+GGG + chr5_3:43725969-43725988 Msa0813200:intron 25.0%
! AAGTCAATAAGTTATGTACA+TGG - chr5_3:43725999-43726018 None:intergenic 25.0%
! TTTCACAATCTCAATATTTG+AGG + chr5_3:43726173-43726192 Msa0813200:intron 25.0%
!!! GTTATCGATTTTTTAAATGC+AGG + chr5_3:43726376-43726395 Msa0813200:intron 25.0%
!!! TTTTTTAAATGCAGGTTAGT+TGG + chr5_3:43726384-43726403 Msa0813200:intron 25.0%
!!! AGAGCATGTTTTTTTAAAAG+AGG - chr5_3:43726479-43726498 None:intergenic 25.0%
! TGAAGTAGGAAATAAAAGAA+TGG + chr5_3:43726886-43726905 Msa0813200:CDS 25.0%
! ACGACTTATAGTAAATGTAT+GGG + chr5_3:43727054-43727073 Msa0813200:CDS 25.0%
!! TTTTCTCAATAAATCTCTCT+GGG - chr5_3:43727129-43727148 None:intergenic 25.0%
!! TTTTTCTCAATAAATCTCTC+TGG - chr5_3:43727130-43727149 None:intergenic 25.0%
!!! GGATGTTTTGATTAAGTCAT+TGG + chr5_3:43725474-43725493 Msa0813200:CDS 30.0%
AGAGGATATTGTGTATAAGA+TGG + chr5_3:43725555-43725574 Msa0813200:CDS 30.0%
ATTGTGTATAAGATGGTGTT+TGG + chr5_3:43725562-43725581 Msa0813200:CDS 30.0%
!! TCAATTTGACTTGAAGAGTT+TGG + chr5_3:43725600-43725619 Msa0813200:CDS 30.0%
! CAAGAAGGATTGACTTTAAT+TGG + chr5_3:43725625-43725644 Msa0813200:intron 30.0%
TTTAATTGGAGCTTTCAATC+TGG + chr5_3:43725639-43725658 Msa0813200:intron 30.0%
CTGTGTAAATGAATAAAACG+AGG - chr5_3:43725723-43725742 None:intergenic 30.0%
AATACCTAACTACAAGTGAA+GGG - chr5_3:43726092-43726111 None:intergenic 30.0%
CAAGCGATTGTTTGAAAATT+GGG + chr5_3:43726144-43726163 Msa0813200:intron 30.0%
AAGCGATTGTTTGAAAATTG+GGG + chr5_3:43726145-43726164 Msa0813200:intron 30.0%
ATGCTTCAACTATATTCACA+GGG + chr5_3:43726411-43726430 Msa0813200:intron 30.0%
! TATTTTACTCGACATGATAG+TGG + chr5_3:43726766-43726785 Msa0813200:CDS 30.0%
GATGAGATACAAAATGAAGT+AGG + chr5_3:43726872-43726891 Msa0813200:CDS 30.0%
CACGACTTATAGTAAATGTA+TGG + chr5_3:43727053-43727072 Msa0813200:CDS 30.0%
ATAGTAAATGTATGGGCAAT+AGG + chr5_3:43727061-43727080 Msa0813200:CDS 30.0%
TAGTAAATGTATGGGCAATA+GGG + chr5_3:43727062-43727081 Msa0813200:CDS 30.0%
!!! GGATGTTTTGATTAAGTCAT+TGG + chr5_3:43725474-43725493 Msa0813200:CDS 30.0%
AGAGGATATTGTGTATAAGA+TGG + chr5_3:43725555-43725574 Msa0813200:CDS 30.0%
ATTGTGTATAAGATGGTGTT+TGG + chr5_3:43725562-43725581 Msa0813200:CDS 30.0%
!! TCAATTTGACTTGAAGAGTT+TGG + chr5_3:43725600-43725619 Msa0813200:CDS 30.0%
! CAAGAAGGATTGACTTTAAT+TGG + chr5_3:43725625-43725644 Msa0813200:intron 30.0%
TTTAATTGGAGCTTTCAATC+TGG + chr5_3:43725639-43725658 Msa0813200:intron 30.0%
CTGTGTAAATGAATAAAACG+AGG - chr5_3:43725723-43725742 None:intergenic 30.0%
AATACCTAACTACAAGTGAA+GGG - chr5_3:43726092-43726111 None:intergenic 30.0%
CAAGCGATTGTTTGAAAATT+GGG + chr5_3:43726144-43726163 Msa0813200:intron 30.0%
AAGCGATTGTTTGAAAATTG+GGG + chr5_3:43726145-43726164 Msa0813200:intron 30.0%
ATGCTTCAACTATATTCACA+GGG + chr5_3:43726411-43726430 Msa0813200:intron 30.0%
! TATTTTACTCGACATGATAG+TGG + chr5_3:43726766-43726785 Msa0813200:CDS 30.0%
GATGAGATACAAAATGAAGT+AGG + chr5_3:43726872-43726891 Msa0813200:CDS 30.0%
CACGACTTATAGTAAATGTA+TGG + chr5_3:43727053-43727072 Msa0813200:CDS 30.0%
ATAGTAAATGTATGGGCAAT+AGG + chr5_3:43727061-43727080 Msa0813200:CDS 30.0%
TAGTAAATGTATGGGCAATA+GGG + chr5_3:43727062-43727081 Msa0813200:CDS 30.0%
TCCTATTAGGAAGGAAAAGT+TGG + chr5_3:43725453-43725472 Msa0813200:CDS 35.0%
! TCCAACTTTTCCTTCCTAAT+AGG - chr5_3:43725457-43725476 None:intergenic 35.0%
TGTATAAGATGGTGTTTGGT+CGG + chr5_3:43725566-43725585 Msa0813200:CDS 35.0%
! TTGAAGAGTTTGGTTCAAGA+AGG + chr5_3:43725610-43725629 Msa0813200:intron 35.0%
AAGTGAAGGGTAGTTACATA+TGG - chr5_3:43726079-43726098 None:intergenic 35.0%
GAATACCTAACTACAAGTGA+AGG - chr5_3:43726093-43726112 None:intergenic 35.0%
AAACAATCGCTTGGTATTTG+AGG - chr5_3:43726137-43726156 None:intergenic 35.0%
! CCAATTTTCAAACAATCGCT+TGG - chr5_3:43726146-43726165 None:intergenic 35.0%
CCAAGCGATTGTTTGAAAAT+TGG + chr5_3:43726143-43726162 Msa0813200:intron 35.0%
! ATGGTGTAGTTTTCTTTTCG+TGG + chr5_3:43726265-43726284 Msa0813200:intron 35.0%
GATGCTTCAACTATATTCAC+AGG + chr5_3:43726410-43726429 Msa0813200:intron 35.0%
! CTATGAGTTCTAGTCATGAA+GGG + chr5_3:43726434-43726453 Msa0813200:intron 35.0%
! TATGAGTTCTAGTCATGAAG+GGG + chr5_3:43726435-43726454 Msa0813200:intron 35.0%
AGTCAGTAAAGCAATTGATG+AGG + chr5_3:43726592-43726611 Msa0813200:CDS 35.0%
CATTGATCGAACTAACATCA+AGG + chr5_3:43726742-43726761 Msa0813200:CDS 35.0%
ATCTGCTACCTCAATTGAAT+GGG + chr5_3:43726802-43726821 Msa0813200:CDS 35.0%
AGATAAAGCCCATTCAATTG+AGG - chr5_3:43726813-43726832 None:intergenic 35.0%
!!! TGAAGCTTTTTCATCACTCT+TGG - chr5_3:43726851-43726870 None:intergenic 35.0%
TAAAAGAATGGTTGACGAGA+AGG + chr5_3:43726898-43726917 Msa0813200:CDS 35.0%
TAGGGAGAGATTGTAATGTT+TGG + chr5_3:43727080-43727099 Msa0813200:CDS 35.0%
TCCTATTAGGAAGGAAAAGT+TGG + chr5_3:43725453-43725472 Msa0813200:CDS 35.0%
! TCCAACTTTTCCTTCCTAAT+AGG - chr5_3:43725457-43725476 None:intergenic 35.0%
TGTATAAGATGGTGTTTGGT+CGG + chr5_3:43725566-43725585 Msa0813200:CDS 35.0%
! TTGAAGAGTTTGGTTCAAGA+AGG + chr5_3:43725610-43725629 Msa0813200:intron 35.0%
AAGTGAAGGGTAGTTACATA+TGG - chr5_3:43726079-43726098 None:intergenic 35.0%
GAATACCTAACTACAAGTGA+AGG - chr5_3:43726093-43726112 None:intergenic 35.0%
AAACAATCGCTTGGTATTTG+AGG - chr5_3:43726137-43726156 None:intergenic 35.0%
! CCAATTTTCAAACAATCGCT+TGG - chr5_3:43726146-43726165 None:intergenic 35.0%
CCAAGCGATTGTTTGAAAAT+TGG + chr5_3:43726143-43726162 Msa0813200:intron 35.0%
! ATGGTGTAGTTTTCTTTTCG+TGG + chr5_3:43726265-43726284 Msa0813200:intron 35.0%
GATGCTTCAACTATATTCAC+AGG + chr5_3:43726410-43726429 Msa0813200:intron 35.0%
! CTATGAGTTCTAGTCATGAA+GGG + chr5_3:43726434-43726453 Msa0813200:intron 35.0%
! TATGAGTTCTAGTCATGAAG+GGG + chr5_3:43726435-43726454 Msa0813200:intron 35.0%
AGTCAGTAAAGCAATTGATG+AGG + chr5_3:43726592-43726611 Msa0813200:CDS 35.0%
CATTGATCGAACTAACATCA+AGG + chr5_3:43726742-43726761 Msa0813200:CDS 35.0%
ATCTGCTACCTCAATTGAAT+GGG + chr5_3:43726802-43726821 Msa0813200:CDS 35.0%
AGATAAAGCCCATTCAATTG+AGG - chr5_3:43726813-43726832 None:intergenic 35.0%
!!! TGAAGCTTTTTCATCACTCT+TGG - chr5_3:43726851-43726870 None:intergenic 35.0%
TAAAAGAATGGTTGACGAGA+AGG + chr5_3:43726898-43726917 Msa0813200:CDS 35.0%
TAGGGAGAGATTGTAATGTT+TGG + chr5_3:43727080-43727099 Msa0813200:CDS 35.0%
ATCTGGCTGATTATGTTCCT+TGG + chr5_3:43725656-43725675 Msa0813200:intron 40.0%
AGGTCAAAAATACCTAGCCA+AGG - chr5_3:43725676-43725695 None:intergenic 40.0%
!! GCTAGGTATTTTTGACCTTC+AGG + chr5_3:43725678-43725697 Msa0813200:intron 40.0%
ACTACCCTTCACTTGTAGTT+AGG + chr5_3:43726085-43726104 Msa0813200:intron 40.0%
! GCTATGAGTTCTAGTCATGA+AGG + chr5_3:43726433-43726452 Msa0813200:intron 40.0%
! ATGAGTTCTAGTCATGAAGG+GGG + chr5_3:43726436-43726455 Msa0813200:intron 40.0%
CATCTGCTACCTCAATTGAA+TGG + chr5_3:43726801-43726820 Msa0813200:CDS 40.0%
! GATTCATGAGGGACTAGTAA+CGG - chr5_3:43726989-43727008 None:intergenic 40.0%
TAGTCCCTCATGAATCTAGA+GGG + chr5_3:43726993-43727012 Msa0813200:CDS 40.0%
ATCTGGCTGATTATGTTCCT+TGG + chr5_3:43725656-43725675 Msa0813200:intron 40.0%
AGGTCAAAAATACCTAGCCA+AGG - chr5_3:43725676-43725695 None:intergenic 40.0%
!! GCTAGGTATTTTTGACCTTC+AGG + chr5_3:43725678-43725697 Msa0813200:intron 40.0%
ACTACCCTTCACTTGTAGTT+AGG + chr5_3:43726085-43726104 Msa0813200:intron 40.0%
! GCTATGAGTTCTAGTCATGA+AGG + chr5_3:43726433-43726452 Msa0813200:intron 40.0%
! ATGAGTTCTAGTCATGAAGG+GGG + chr5_3:43726436-43726455 Msa0813200:intron 40.0%
CATCTGCTACCTCAATTGAA+TGG + chr5_3:43726801-43726820 Msa0813200:CDS 40.0%
! GATTCATGAGGGACTAGTAA+CGG - chr5_3:43726989-43727008 None:intergenic 40.0%
TAGTCCCTCATGAATCTAGA+GGG + chr5_3:43726993-43727012 Msa0813200:CDS 40.0%
GTCATTGGAGAAAGCTGCTT+TGG + chr5_3:43725489-43725508 Msa0813200:CDS 45.0%
! ATTGGAGAAAGCTGCTTTGG+TGG + chr5_3:43725492-43725511 Msa0813200:CDS 45.0%
! TTGGAGAAAGCTGCTTTGGT+GGG + chr5_3:43725493-43725512 Msa0813200:CDS 45.0%
GCTGATTATGTTCCTTGGCT+AGG + chr5_3:43725661-43725680 Msa0813200:intron 45.0%
! AGCAATTGATGAGGTGCTAG+AGG + chr5_3:43726601-43726620 Msa0813200:CDS 45.0%
CACCAAACCATTGATGTCGA+GGG + chr5_3:43726704-43726723 Msa0813200:CDS 45.0%
TTGTTCACCCTCGACATCAA+TGG - chr5_3:43726714-43726733 None:intergenic 45.0%
TGCTACTGGGTGAAGTCTTA+AGG - chr5_3:43726966-43726985 None:intergenic 45.0%
CTAGTCCCTCATGAATCTAG+AGG + chr5_3:43726992-43727011 Msa0813200:CDS 45.0%
TGCTCCCTCTAGATTCATGA+GGG - chr5_3:43727000-43727019 None:intergenic 45.0%
! AGAGGGAGCACAACAATTGA+TGG + chr5_3:43727010-43727029 Msa0813200:CDS 45.0%
GTCATTGGAGAAAGCTGCTT+TGG + chr5_3:43725489-43725508 Msa0813200:CDS 45.0%
! ATTGGAGAAAGCTGCTTTGG+TGG + chr5_3:43725492-43725511 Msa0813200:CDS 45.0%
! TTGGAGAAAGCTGCTTTGGT+GGG + chr5_3:43725493-43725512 Msa0813200:CDS 45.0%
GCTGATTATGTTCCTTGGCT+AGG + chr5_3:43725661-43725680 Msa0813200:intron 45.0%
! AGCAATTGATGAGGTGCTAG+AGG + chr5_3:43726601-43726620 Msa0813200:CDS 45.0%
CACCAAACCATTGATGTCGA+GGG + chr5_3:43726704-43726723 Msa0813200:CDS 45.0%
TTGTTCACCCTCGACATCAA+TGG - chr5_3:43726714-43726733 None:intergenic 45.0%
TGCTACTGGGTGAAGTCTTA+AGG - chr5_3:43726966-43726985 None:intergenic 45.0%
CTAGTCCCTCATGAATCTAG+AGG + chr5_3:43726992-43727011 Msa0813200:CDS 45.0%
TGCTCCCTCTAGATTCATGA+GGG - chr5_3:43727000-43727019 None:intergenic 45.0%
! AGAGGGAGCACAACAATTGA+TGG + chr5_3:43727010-43727029 Msa0813200:CDS 45.0%
!! TAAATTAGATAATTAAAATA+AGG + chr5_3:43725854-43725873 Msa0813200:intron 5.0%
!! AAATTAGATAATTAAAATAA+GGG + chr5_3:43725855-43725874 Msa0813200:intron 5.0%
!! TAAATTAGATAATTAAAATA+AGG + chr5_3:43725854-43725873 Msa0813200:intron 5.0%
!! AAATTAGATAATTAAAATAA+GGG + chr5_3:43725855-43725874 Msa0813200:intron 5.0%
GCACCAAACCATTGATGTCG+AGG + chr5_3:43726703-43726722 Msa0813200:CDS 50.0%
CACCCTCGACATCAATGGTT+TGG - chr5_3:43726709-43726728 None:intergenic 50.0%
!! GGACTAGTAACGGTGCTACT+GGG - chr5_3:43726979-43726998 None:intergenic 50.0%
GTGCTCCCTCTAGATTCATG+AGG - chr5_3:43727001-43727020 None:intergenic 50.0%
GCACCAAACCATTGATGTCG+AGG + chr5_3:43726703-43726722 Msa0813200:CDS 50.0%
CACCCTCGACATCAATGGTT+TGG - chr5_3:43726709-43726728 None:intergenic 50.0%
!! GGACTAGTAACGGTGCTACT+GGG - chr5_3:43726979-43726998 None:intergenic 50.0%
GTGCTCCCTCTAGATTCATG+AGG - chr5_3:43727001-43727020 None:intergenic 50.0%
! GAAAGCTGCTTTGGTGGGTG+AGG + chr5_3:43725498-43725517 Msa0813200:CDS 55.0%
!! GGGACTAGTAACGGTGCTAC+TGG - chr5_3:43726980-43726999 None:intergenic 55.0%
! GAAAGCTGCTTTGGTGGGTG+AGG + chr5_3:43725498-43725517 Msa0813200:CDS 55.0%
!! GGGACTAGTAACGGTGCTAC+TGG - chr5_3:43726980-43726999 None:intergenic 55.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 43725445 43727168 43725445 ID=Msa0813200;Name=Msa0813200
chr5_3 mRNA 43725445 43727168 43725445 ID=Msa0813200-mRNA-1;Parent=Msa0813200;Name=Msa0813200-mRNA-1;_AED=0.41;_eAED=0.41;_QI=0|0|0|1|0|0|2|0|259
chr5_3 exon 43725445 43725621 43725445 ID=Msa0813200-mRNA-1:exon:13486;Parent=Msa0813200-mRNA-1
chr5_3 exon 43726569 43727168 43726569 ID=Msa0813200-mRNA-1:exon:13487;Parent=Msa0813200-mRNA-1
chr5_3 CDS 43725445 43725621 43725445 ID=Msa0813200-mRNA-1:cds;Parent=Msa0813200-mRNA-1
chr5_3 CDS 43726569 43727168 43726569 ID=Msa0813200-mRNA-1:cds;Parent=Msa0813200-mRNA-1
Gene Sequence

>Msa0813200

ATGTTTGGTCCTATTAGGAAGGAAAAGTTGGATGTTTTGATTAAGTCATTGGAGAAAGCTGCTTTGGTGGGTGAGGTTGTGAATGTTAGTGAAGTTGTAGAAAATCTTATAGAGGATATTGTGTATAAGATGGTGTTTGGTCGGAGTAAGTATGATCAATTTGACTTGAAGAGTTTGGGATTAACAAGATCTTGCAAGAAAGTCAGTAAAGCAATTGATGAGGTGCTAGAGGTGATATTAACAGAACATGAACAAGCTGTTAACGTAAACAAAACTCGTAAAGATTTTGTAGACATACTTCTTTCAATTATGCACCAAACCATTGATGTCGAGGGTGAACAAAATCTCGTCATTGATCGAACTAACATCAAGGCTATTTTACTCGACATGATAGTGGCAGCAATTGATACATCTGCTACCTCAATTGAATGGGCTTTATCTGAACTTTTAAGACATCCAAGAGTGATGAAAAAGCTTCAAGATGAGATACAAAATGAAGTAGGAAATAAAAGAATGGTTGACGAGAAGGATCTGAAGAAATTAAATTATTTAGACATGGTGGTTGATGAGACCTTAAGACTTCACCCAGTAGCACCGTTACTAGTCCCTCATGAATCTAGAGGGAGCACAACAATTGATGGTTATTTTATAAAGGAAAAGACACGACTTATAGTAAATGTATGGGCAATAGGGAGAGATTGTAATGTTTGGTCAGAAAATGCTGAAGAATTTTACCCAGAGAGATTTATTGAGAAAAAAATGAATTATCTCGGACAA
Protein sequence

>Msa0813200

MFGPIRKEKLDVLIKSLEKAALVGEVVNVSEVVENLIEDIVYKMVFGRSKYDQFDLKSLGLTRSCKKVSKAIDEVLEVILTEHEQAVNVNKTRKDFVDILLSIMHQTIDVEGEQNLVIDRTNIKAILLDMIVAAIDTSATSIEWALSELLRHPRVMKKLQDEIQNEVGNKRMVDEKDLKKLNYLDMVVDETLRLHPVAPLLVPHESRGSTTIDGYFIKEKTRLIVNVWAIGRDCNVWSENAEEFYPERFIEKKMNYLGQ