AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0179280

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0179280 MtrunA17_Chr1g0191051 85.030 167 5 1 49 195 157 323 3.96e-86 256
Msa0179280 MtrunA17_Chr1g0191061 77.246 167 18 1 49 195 217 383 1.50e-72 224
Msa0179280 MtrunA17_Chr4g0045721 57.317 164 50 1 49 192 197 360 5.91e-61 193
Msa0179280 MtrunA17_Chr1g0191071 65.868 167 32 2 49 195 103 264 8.96e-57 180
Msa0179280 MtrunA17_Chr1g0191041 67.665 167 34 1 49 195 158 324 2.44e-56 181
Msa0179280 MtrunA17_Chr1g0205381 67.066 167 35 1 49 195 158 324 1.13e-55 179
Msa0179280 MtrunA17_Chr5g0394491 65.269 167 38 1 49 195 158 324 2.08e-54 176
Msa0179280 MtrunA17_Chr4g0045771 55.488 164 45 2 49 192 196 351 3.34e-54 176
Msa0179280 MtrunA17_Chr7g0248021 55.488 164 53 1 49 192 211 374 2.47e-51 169
Msa0179280 MtrunA17_Chr4g0045781 58.537 164 48 1 49 192 216 379 1.42e-47 159
Msa0179280 MtrunA17_Chr7g0254401 51.829 164 49 2 49 192 215 368 5.13e-38 134
Msa0179280 MtrunA17_Chr5g0446431 56.667 60 26 0 49 108 233 292 1.74e-17 79.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0179280 AT3G04940.1 64.634 164 38 1 49 192 158 321 2.09e-58 186
Msa0179280 AT3G04940.2 64.634 164 38 1 49 192 158 321 2.09e-58 186
Msa0179280 AT4G14880.5 62.874 167 42 1 49 195 155 321 1.08e-56 182
Msa0179280 AT4G14880.3 62.874 167 42 1 49 195 155 321 1.08e-56 182
Msa0179280 AT4G14880.4 62.874 167 42 1 49 195 155 321 1.08e-56 182
Msa0179280 AT4G14880.2 62.874 167 42 1 49 195 155 321 1.08e-56 182
Msa0179280 AT4G14880.1 62.874 167 42 1 49 195 155 321 1.08e-56 182
Msa0179280 AT2G43750.1 62.805 164 41 1 49 192 225 388 2.67e-53 175
Msa0179280 AT2G43750.2 62.805 164 41 1 49 192 225 388 2.67e-53 175
Msa0179280 AT3G59760.3 62.805 164 41 1 49 192 263 426 7.63e-53 175
Msa0179280 AT3G59760.1 62.805 164 41 1 49 192 263 426 8.22e-53 175
Msa0179280 AT3G22460.1 56.287 167 33 2 49 195 103 249 2.91e-52 168
Msa0179280 AT3G61440.3 55.488 164 53 1 49 192 78 241 9.65e-51 164
Msa0179280 AT5G28020.5 51.339 224 66 4 5 195 24 237 1.14e-50 164
Msa0179280 AT5G28030.1 62.275 167 43 1 49 195 157 323 1.27e-50 166
Msa0179280 AT5G28030.4 62.275 167 43 1 49 195 157 323 1.27e-50 166
Msa0179280 AT5G28030.5 62.275 167 43 1 49 195 157 323 1.27e-50 166
Msa0179280 AT5G28030.2 62.275 167 43 1 49 195 157 323 1.27e-50 166
Msa0179280 AT3G61440.2 55.488 164 53 1 49 192 103 266 1.86e-50 164
Msa0179280 AT5G28020.2 51.339 224 66 4 5 195 110 323 2.59e-50 165
Msa0179280 AT5G28020.4 51.339 224 66 4 5 195 110 323 2.59e-50 165
Msa0179280 AT5G28020.1 51.339 224 66 4 5 195 110 323 2.59e-50 165
Msa0179280 AT5G28020.3 51.339 224 66 4 5 195 110 323 2.59e-50 165
Msa0179280 AT5G28020.6 51.339 224 66 4 5 195 110 323 2.59e-50 165
Msa0179280 AT3G61440.1 55.488 164 53 1 49 192 199 362 1.11e-49 165
Msa0179280 AT3G59760.2 60.432 139 35 1 49 167 263 401 5.18e-36 130
Msa0179280 AT3G03630.1 52.410 166 49 2 49 194 249 404 5.42e-35 127
Msa0179280 AT5G28030.3 70.652 92 27 0 49 140 157 248 4.25e-31 114
Msa0179280 AT3G61440.4 55.140 107 46 1 49 155 199 303 3.78e-28 108
Msa0179280 AT1G55880.2 50.000 60 30 0 49 108 230 289 5.40e-15 72.4
Msa0179280 AT1G55880.1 50.000 60 30 0 49 108 230 289 6.51e-15 72.4
Msa0179280 AT3G22460.2 83.871 31 5 0 49 79 158 188 3.32e-11 60.1

Find 88 sgRNAs with CRISPR-Local

Find 266 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACAGCAGCTGCAATAAAATT+AGG 0.184994 1_4:+66787581 Msa0179280:CDS
GAGAGACAACATTGTGATTA+TGG 0.249845 1_4:+66788212 Msa0179280:three_prime_UTR
TCTACTAGATGAAGTTATTC+AGG 0.259370 1_4:+66786590 Msa0179280:CDS
CAAGTATCGCTCTCCAAAAC+TGG 0.276395 1_4:-66787794 None:intergenic
AGTCATGTGTTAGCATTTAT+AGG 0.290392 1_4:+66788338 Msa0179280:three_prime_UTR
ATGACTATATTTAAAGTAAC+TGG 0.299376 1_4:-66788039 None:intergenic
TTGGTTGCAGGGATAGGAAC+TGG 0.301174 1_4:+66785565 Msa0179280:CDS
ATTTGACTAATTACCTTTCC+AGG 0.303581 1_4:-66784762 None:intergenic
AGAGTTGATGCTTTGGTTGC+AGG 0.314791 1_4:+66785553 Msa0179280:CDS
AGACCACTGGCCCTGAGATT+TGG 0.324065 1_4:+66785515 Msa0179280:CDS
TGGAGGGAGAGTTGATGCTT+TGG 0.358657 1_4:+66785546 Msa0179280:CDS
ACTATTCATACCTTGATCTC+TGG 0.360280 1_4:-66785631 None:intergenic
CCAGAGTCTTTCCAAATCTC+AGG 0.373679 1_4:-66785526 None:intergenic
CGGAGATGTGATTGAGGGTA+TGG 0.374950 1_4:+66788279 Msa0179280:three_prime_UTR
CTTTGTTGAATAATAGCGTT+TGG 0.382842 1_4:+66787970 Msa0179280:three_prime_UTR
CATCTAGTAGATCAACTTCC+AGG 0.383555 1_4:-66786578 None:intergenic
CAGGTACATCACTCCCTCTA+TGG 0.403105 1_4:-66788247 None:intergenic
GTCTCTCCAGCTGTCAATCT+AGG 0.407905 1_4:-66788196 None:intergenic
CATTACCATTTGATCAGGAT+TGG 0.408628 1_4:+66788172 Msa0179280:three_prime_UTR
ATGGCGACTAGGCTTTCCTT+AGG 0.412870 1_4:+66788361 Msa0179280:three_prime_UTR
TTGCAGATGGGAATTTCATC+AGG 0.416958 1_4:+66787551 Msa0179280:intron
CACATCTCCGGAGTGTTTGC+AGG 0.419919 1_4:-66788266 None:intergenic
GGAACCATTACCATTTGATC+AGG 0.422790 1_4:+66788167 Msa0179280:three_prime_UTR
CAGCAGCTGCAATAAAATTA+GGG 0.431631 1_4:+66787582 Msa0179280:CDS
CAGCACCGATCCCTTGGATT+AGG 0.432171 1_4:-66786539 None:intergenic
TTGATCCTTACTCGTGTGAA+TGG 0.434994 1_4:-66788143 None:intergenic
CTATTCATACCTTGATCTCT+GGG 0.435238 1_4:-66785630 None:intergenic
TTTCTCCATTCACACGAGTA+AGG 0.439368 1_4:+66788138 Msa0179280:three_prime_UTR
AGACAGAATTTGTTAACAAA+AGG 0.440503 1_4:+66788098 Msa0179280:three_prime_UTR
CGACACCAGCACCGATCCCT+TGG 0.442965 1_4:-66786545 None:intergenic
TTGTTCAGCTTCATGCCTGA+TGG 0.443006 1_4:-66787836 None:intergenic
GAGTTGATGCTTTGGTTGCA+GGG 0.455243 1_4:+66785554 Msa0179280:CDS
TAGGTCCAATCCTGATCAAA+TGG 0.460109 1_4:-66788177 None:intergenic
GTAGATCAACTTCCAGGATA+GGG 0.464520 1_4:-66786572 None:intergenic
TGGTTGCAGGGATAGGAACT+GGG 0.484341 1_4:+66785566 Msa0179280:CDS
GGAGATGTGATTGAGGGTAT+GGG 0.488789 1_4:+66788280 Msa0179280:three_prime_UTR
GGGGAACAGTAACAGGTGTT+GGG 0.494810 1_4:+66785587 Msa0179280:CDS
CAATCCTGATCAAATGGTAA+TGG 0.496170 1_4:-66788171 None:intergenic
CCTTCTTGATTGCAAAGTGT+TGG 0.496354 1_4:-66784295 None:intergenic
GATGCTTTGGTTGCAGGGAT+AGG 0.501960 1_4:+66785559 Msa0179280:CDS
AGTAGATCAACTTCCAGGAT+AGG 0.502056 1_4:-66786573 None:intergenic
CACAATTGTGACAGTAGAGC+TGG 0.505735 1_4:-66787911 None:intergenic
TCTGAAAGTGCAGTTCTGAA+TGG 0.514085 1_4:+66785736 Msa0179280:CDS
ATTGAAGATGCCGAGAGTAA+AGG 0.514802 1_4:+66784729 Msa0179280:CDS
CTAATCCAAGGGATCGGTGC+TGG 0.516701 1_4:+66786540 Msa0179280:CDS
TGGCGACTAGGCTTTCCTTA+GGG 0.522654 1_4:+66788362 Msa0179280:three_prime_UTR
TTACCTTTCCAGGTGTAATG+AGG 0.523442 1_4:-66784752 None:intergenic
TTCAGAACTGCACTTTCAGA+TGG 0.538348 1_4:-66785733 None:intergenic
CCTGAGATTTGGAAAGACTC+TGG 0.544001 1_4:+66785526 Msa0179280:CDS
GTTCTGAATGGAGGAAAGCC+AGG 0.546295 1_4:+66785748 Msa0179280:CDS
TAGATTCATTACGAGACCAC+TGG 0.548191 1_4:+66785502 Msa0179280:intron
TGTAATGAGGCCTTTACTCT+CGG 0.551658 1_4:-66784739 None:intergenic
CACTCCGGAGATGTGATTGA+GGG 0.556021 1_4:+66788274 Msa0179280:three_prime_UTR
ATGTGTTAGCATTTATAGGA+TGG 0.559639 1_4:+66788342 Msa0179280:three_prime_UTR
ATTGGACCTAGATTGACAGC+TGG 0.560629 1_4:+66788190 Msa0179280:three_prime_UTR
AGGCCTCATTACACCTGGAA+AGG 0.563587 1_4:+66784749 Msa0179280:CDS
CAAATGACATTTGACTGAAG+TGG 0.564571 1_4:+66787856 Msa0179280:exon
ATTTAAAGTTTATGTCTGCA+TGG 0.568287 1_4:-66788013 None:intergenic
GGATTGTGGCAGCTCCATAG+AGG 0.569117 1_4:+66788233 Msa0179280:three_prime_UTR
TGAATTGGTGGATTTCCCTA+AGG 0.569920 1_4:-66788377 None:intergenic
GGGAAGAGACCAGAAAATGC+AGG 0.570015 1_4:+66787602 Msa0179280:CDS
ACACTCCGGAGATGTGATTG+AGG 0.573023 1_4:+66788273 Msa0179280:three_prime_UTR
CATACCCTCAATCACATCTC+CGG 0.573818 1_4:-66788278 None:intergenic
CAGCTCTACTGTCACAATTG+TGG 0.575521 1_4:+66787912 Msa0179280:three_prime_UTR
AAAGGCAAACACCTAATCCA+AGG 0.576831 1_4:+66786528 Msa0179280:intron
TAGATCAACTTCCAGGATAG+GGG 0.577360 1_4:-66786571 None:intergenic
AACATTGTGATTATGGATTG+TGG 0.587206 1_4:+66788219 Msa0179280:three_prime_UTR
AGTAAAGGCCTCATTACACC+TGG 0.589255 1_4:+66784744 Msa0179280:CDS
GCATTTATAGGATGGCGACT+AGG 0.592649 1_4:+66788350 Msa0179280:three_prime_UTR
TTTCCAAATCTCAGGGCCAG+TGG 0.596982 1_4:-66785518 None:intergenic
GAGATGTGATTGAGGGTATG+GGG 0.597375 1_4:+66788281 Msa0179280:three_prime_UTR
GCTTTCTTCATCAGATAACA+TGG 0.598151 1_4:+66784271 Msa0179280:CDS
AGATTTGGAAAGACTCTGGA+GGG 0.598831 1_4:+66785530 Msa0179280:CDS
TTCACACGAGTAAGGATCAA+AGG 0.601177 1_4:+66788146 Msa0179280:three_prime_UTR
CAGAGTCTTTCCAAATCTCA+GGG 0.601201 1_4:-66785525 None:intergenic
AAGTATCGCTCTCCAAAACT+GGG 0.605328 1_4:-66787793 None:intergenic
CCAACACTTTGCAATCAAGA+AGG 0.607054 1_4:+66784295 Msa0179280:CDS
GAGATTTGGAAAGACTCTGG+AGG 0.616942 1_4:+66785529 Msa0179280:CDS
AAACACCTAATCCAAGGGAT+CGG 0.628864 1_4:+66786534 Msa0179280:CDS
TGATGTACCTGCAAACACTC+CGG 0.629681 1_4:+66788259 Msa0179280:three_prime_UTR
GATTGTGGCAGCTCCATAGA+GGG 0.630144 1_4:+66788234 Msa0179280:three_prime_UTR
TAAATGCTAACACATGACTC+AGG 0.638286 1_4:-66788334 None:intergenic
AGATCAACTTCCAGGATAGG+GGG 0.642892 1_4:-66786570 None:intergenic
AAGGCAAACACCTAATCCAA+GGG 0.643306 1_4:+66786529 Msa0179280:intron
AGGTGTTGGGAAGTTCCTCA+AGG 0.665059 1_4:+66785600 Msa0179280:CDS
GAAAGTGCAGTTCTGAATGG+AGG 0.666727 1_4:+66785739 Msa0179280:CDS
GGTTGCAGGGATAGGAACTG+GGG 0.673121 1_4:+66785567 Msa0179280:CDS
GTTGCAGGGATAGGAACTGG+GGG 0.729118 1_4:+66785568 Msa0179280:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AACATTATAAGTAATAACAT+TGG - chr1_4:66785036-66785055 None:intergenic 15.0%
!! TATATATTAACAAATTATGC+AGG - chr1_4:66786729-66786748 None:intergenic 15.0%
!! TATGTTGAATAAACTTATTA+AGG - chr1_4:66787654-66787673 None:intergenic 15.0%
!!! ATGTTGTTTAAATATACCAA+TGG - chr1_4:66784510-66784529 None:intergenic 20.0%
!! TATTTAAACAACATTACAGA+AGG + chr1_4:66784516-66784535 Msa0179280:intron 20.0%
!! ATTTAAACAACATTACAGAA+GGG + chr1_4:66784517-66784536 Msa0179280:intron 20.0%
!!! AATCGAGTTATTCAAATTTT+GGG + chr1_4:66785005-66785024 Msa0179280:intron 20.0%
!! AACAATATGAACAATAGTAT+AGG - chr1_4:66785087-66785106 None:intergenic 20.0%
!!! AGTGTAATCTTTTTAAACAA+TGG + chr1_4:66785126-66785145 Msa0179280:intron 20.0%
!!! ACAGTTCATATTTTCTAATT+TGG + chr1_4:66785432-66785451 Msa0179280:intron 20.0%
!!! TATTTTCTAATTTGGTTGTT+TGG + chr1_4:66785440-66785459 Msa0179280:intron 20.0%
!! AAAACAACGACAAAATTAAT+TGG - chr1_4:66785483-66785502 None:intergenic 20.0%
!! TAGAATTGTTCTATCAAAAT+TGG + chr1_4:66786208-66786227 Msa0179280:intron 20.0%
!! TATTTGATTCTTCTAATTTC+TGG + chr1_4:66786808-66786827 Msa0179280:intron 20.0%
!!! GACAGTATACAATTTTTTTA+CGG + chr1_4:66787123-66787142 Msa0179280:intron 20.0%
!!! ATGACTATATTTAAAGTAAC+TGG - chr1_4:66788042-66788061 None:intergenic 20.0%
! CAATTCATTGTGAAGTTAAT+AGG + chr1_4:66784477-66784496 Msa0179280:intron 25.0%
!!! TAATATTGTTTTTCTCACTC+AGG + chr1_4:66784691-66784710 Msa0179280:intron 25.0%
!! AGATATCTAAGTTTTCAAAC+TGG + chr1_4:66784786-66784805 Msa0179280:intron 25.0%
!! GATATCTAAGTTTTCAAACT+GGG + chr1_4:66784787-66784806 Msa0179280:intron 25.0%
! CTAACTCATCATTCAAAAAT+TGG + chr1_4:66784865-66784884 Msa0179280:intron 25.0%
!!! CTTTATGAACTCTTTTAAGT+CGG + chr1_4:66784911-66784930 Msa0179280:intron 25.0%
! TACTCAAACTTGTAATAGTA+TGG + chr1_4:66784973-66784992 Msa0179280:intron 25.0%
!! GAATCGAGTTATTCAAATTT+TGG + chr1_4:66785004-66785023 Msa0179280:intron 25.0%
! AATATGAACAATAGTATAGG+TGG - chr1_4:66785084-66785103 None:intergenic 25.0%
! TGATTGAGCATATAACTATT+AGG - chr1_4:66785378-66785397 None:intergenic 25.0%
!!! TGATTTTGAGTATTTCTTTC+TGG + chr1_4:66785779-66785798 Msa0179280:intron 25.0%
! TGTGAATGTTATTGTATTCT+TGG + chr1_4:66785826-66785845 Msa0179280:intron 25.0%
! ACATAGACATACAACAAATT+GGG - chr1_4:66785969-66785988 None:intergenic 25.0%
! TACATAGACATACAACAAAT+TGG - chr1_4:66785970-66785989 None:intergenic 25.0%
!!! AATTTGTTGTATGTCTATGT+AGG + chr1_4:66785969-66785988 Msa0179280:intron 25.0%
!! TTTTATGTTTGGATTTTGGA+GGG - chr1_4:66786128-66786147 None:intergenic 25.0%
!! AACCTTTTATGTTTGGATTT+TGG - chr1_4:66786132-66786151 None:intergenic 25.0%
!! AGGTATAAACCTTTTATGTT+TGG - chr1_4:66786139-66786158 None:intergenic 25.0%
! TGGAAAAATCAATCAGTTAA+CGG - chr1_4:66786494-66786513 None:intergenic 25.0%
!!! TATCAGTTTTTTCTAGAATC+TGG + chr1_4:66786645-66786664 Msa0179280:intron 25.0%
!!! ACTCTCTTTTGTTTCTTTTT+CGG + chr1_4:66786691-66786710 Msa0179280:intron 25.0%
! AATACTAGCTGTTAATACAA+GGG + chr1_4:66786849-66786868 Msa0179280:intron 25.0%
! GTTATATAACACAAAACTGA+AGG - chr1_4:66787024-66787043 None:intergenic 25.0%
! GTTATATAACTCAGCAAATA+TGG + chr1_4:66787034-66787053 Msa0179280:intron 25.0%
! AGCATAACAAAATGACATTA+CGG - chr1_4:66787169-66787188 None:intergenic 25.0%
!!! TTAGGAAATTATTGATGATG+TGG - chr1_4:66787425-66787444 None:intergenic 25.0%
!! AAGAGTTTAGAAAGTTTGTT+AGG - chr1_4:66787499-66787518 None:intergenic 25.0%
!! ATTTAAAGTTTATGTCTGCA+TGG - chr1_4:66788016-66788035 None:intergenic 25.0%
!!! AGACAGAATTTGTTAACAAA+AGG + chr1_4:66788098-66788117 Msa0179280:three_prime_UTR 25.0%
!!! TCTGTTTTGAAAGATTTTGC+AGG + chr1_4:66784249-66784268 Msa0179280:CDS 30.0%
! TTCACAAACTTGAACTGTTT+TGG + chr1_4:66784619-66784638 Msa0179280:intron 30.0%
ATTTGACTAATTACCTTTCC+AGG - chr1_4:66784765-66784784 None:intergenic 30.0%
CTCATCATTCAAAAATTGGT+TGG + chr1_4:66784869-66784888 Msa0179280:intron 30.0%
! CATTCAAAAATTGGTTGGTA+TGG + chr1_4:66784874-66784893 Msa0179280:intron 30.0%
! AAAATTGGTTGGTATGGTAA+AGG + chr1_4:66784880-66784899 Msa0179280:intron 30.0%
CTATTACAAGTTTGAGTATC+AGG - chr1_4:66784971-66784990 None:intergenic 30.0%
! ACTTGTAATAGTATGGACTA+TGG + chr1_4:66784980-66784999 Msa0179280:intron 30.0%
AAAATTATACTGCGAGCTTT+CGG + chr1_4:66785273-66785292 Msa0179280:intron 30.0%
AAAAACACCATCAATTCCTT+TGG - chr1_4:66785325-66785344 None:intergenic 30.0%
TGTAAATAACACCTTTGGAT+TGG - chr1_4:66785415-66785434 None:intergenic 30.0%
TGAACTGTAAATAACACCTT+TGG - chr1_4:66785420-66785439 None:intergenic 30.0%
TTTCTAATTTGGTTGTTTGG+TGG + chr1_4:66785443-66785462 Msa0179280:intron 30.0%
TTCTAATTTGGTTGTTTGGT+GGG + chr1_4:66785444-66785463 Msa0179280:intron 30.0%
CTCAAAATCATAAAATCACC+TGG - chr1_4:66785769-66785788 None:intergenic 30.0%
!! TTTATGTTTGGATTTTGGAG+GGG - chr1_4:66786127-66786146 None:intergenic 30.0%
! CTTTTATGTTTGGATTTTGG+AGG - chr1_4:66786129-66786148 None:intergenic 30.0%
CTCCAAAATCCAAACATAAA+AGG + chr1_4:66786127-66786146 Msa0179280:intron 30.0%
TTAAAAGTCCTTAGAGGAAA+AGG - chr1_4:66786159-66786178 None:intergenic 30.0%
!! TTTTCCTCTAAGGACTTTTA+AGG + chr1_4:66786158-66786177 Msa0179280:intron 30.0%
TCTAATGTTTCTCATGATAG+TGG - chr1_4:66786192-66786211 None:intergenic 30.0%
TTGTTCTATCAAAATTGGCT+TGG + chr1_4:66786213-66786232 Msa0179280:intron 30.0%
TATTCAAGCATAACCATTTG+AGG + chr1_4:66786468-66786487 Msa0179280:intron 30.0%
TCCATTTGAACACATTTCAA+AGG + chr1_4:66786510-66786529 Msa0179280:intron 30.0%
TCTACTAGATGAAGTTATTC+AGG + chr1_4:66786590-66786609 Msa0179280:CDS 30.0%
TGCTCTCAATACTAATACAT+TGG + chr1_4:66786614-66786633 Msa0179280:intron 30.0%
! GAGAGTCTCATTTTATATGA+AGG - chr1_4:66786677-66786696 None:intergenic 30.0%
!! CTCTCTTTTGTTTCTTTTTC+GGG + chr1_4:66786692-66786711 Msa0179280:intron 30.0%
! AAATTATGCAGGTTTCAAGT+AGG - chr1_4:66786718-66786737 None:intergenic 30.0%
CTTGTATTAACAGCTAGTAT+TGG - chr1_4:66786850-66786869 None:intergenic 30.0%
CAATACTAGCTGTTAATACA+AGG + chr1_4:66786848-66786867 Msa0179280:intron 30.0%
!!! GGATTTTGTTTTAACCAACA+AGG + chr1_4:66786870-66786889 Msa0179280:intron 30.0%
!!! TTTTGTTATGCTGCTTTGAT+AGG + chr1_4:66787177-66787196 Msa0179280:intron 30.0%
CAAAATCGATATGTTACAGA+AGG + chr1_4:66787243-66787262 Msa0179280:intron 30.0%
! TGATAAATGTCTCTTTTCTG+AGG - chr1_4:66787299-66787318 None:intergenic 30.0%
ATAGAACCCTTATTATGGTT+TGG - chr1_4:66787328-66787347 None:intergenic 30.0%
! ATATGAATGTCTTTTGCAGA+TGG + chr1_4:66787538-66787557 Msa0179280:intron 30.0%
! TATGAATGTCTTTTGCAGAT+GGG + chr1_4:66787539-66787558 Msa0179280:intron 30.0%
AATACTCACAAGGAAACATT+AGG - chr1_4:66787721-66787740 None:intergenic 30.0%
CTTTGTTGAATAATAGCGTT+TGG + chr1_4:66787970-66787989 Msa0179280:three_prime_UTR 30.0%
! AACATTGTGATTATGGATTG+TGG + chr1_4:66788219-66788238 Msa0179280:three_prime_UTR 30.0%
AGTCATGTGTTAGCATTTAT+AGG + chr1_4:66788338-66788357 Msa0179280:three_prime_UTR 30.0%
ATGTGTTAGCATTTATAGGA+TGG + chr1_4:66788342-66788361 Msa0179280:three_prime_UTR 30.0%
GCTTTCTTCATCAGATAACA+TGG + chr1_4:66784271-66784290 Msa0179280:CDS 35.0%
! TTCACTGTCTTATTCAGCTA+TGG + chr1_4:66784387-66784406 Msa0179280:intron 35.0%
GTTAATAGGAAACACACCAT+TGG + chr1_4:66784491-66784510 Msa0179280:intron 35.0%
CTATTCATACCTTGATCTCT+GGG - chr1_4:66785633-66785652 None:intergenic 35.0%
ACTATTCATACCTTGATCTC+TGG - chr1_4:66785634-66785653 None:intergenic 35.0%
ACATACAACAAATTGGGACT+CGG - chr1_4:66785963-66785982 None:intergenic 35.0%
TTGTATGTCTATGTAGGAGA+GGG + chr1_4:66785975-66785994 Msa0179280:intron 35.0%
! GGTTTATACCTTTTCCTCTA+AGG + chr1_4:66786148-66786167 Msa0179280:intron 35.0%
GATACCTTAAAAGTCCTTAG+AGG - chr1_4:66786165-66786184 None:intergenic 35.0%
TTGGAGAAAACTTGAAATGC+AGG + chr1_4:66786232-66786251 Msa0179280:intron 35.0%
!!! TTGCTGACTTGTCTGTTTTT+TGG + chr1_4:66786308-66786327 Msa0179280:intron 35.0%
TAAGTCAATGACAACCCAAA+GGG - chr1_4:66786354-66786373 None:intergenic 35.0%
!! GCCTTTGAAATGTGTTCAAA+TGG - chr1_4:66786514-66786533 None:intergenic 35.0%
TGTAATTCACAGAACCTTGT+TGG - chr1_4:66786887-66786906 None:intergenic 35.0%
AACAAGGTTCTGTGAATTAC+AGG + chr1_4:66786886-66786905 Msa0179280:intron 35.0%
TACCAGTAAACCTTCTTTCA+AGG - chr1_4:66786951-66786970 None:intergenic 35.0%
TGAAAGAAGGTTTACTGGTA+TGG + chr1_4:66786951-66786970 Msa0179280:intron 35.0%
ACATTACGGTGAGATATGAT+TGG - chr1_4:66787155-66787174 None:intergenic 35.0%
ACTCAGTCCAAACCATAATA+AGG + chr1_4:66787318-66787337 Msa0179280:intron 35.0%
CTCAGTCCAAACCATAATAA+GGG + chr1_4:66787319-66787338 Msa0179280:intron 35.0%
ACCATAATAAGGGTTCTATC+TGG + chr1_4:66787329-66787348 Msa0179280:intron 35.0%
TCCAGATAGAACCCTTATTA+TGG - chr1_4:66787333-66787352 None:intergenic 35.0%
GAAGGATGATGCAAAAGATA+AGG - chr1_4:66787369-66787388 None:intergenic 35.0%
!! TAGAAAGTTTGTTAGGACAC+AGG - chr1_4:66787492-66787511 None:intergenic 35.0%
ACAGCAGCTGCAATAAAATT+AGG + chr1_4:66787581-66787600 Msa0179280:CDS 35.0%
CAGCAGCTGCAATAAAATTA+GGG + chr1_4:66787582-66787601 Msa0179280:CDS 35.0%
GACATCAACTAATACTCACA+AGG - chr1_4:66787731-66787750 None:intergenic 35.0%
CAAATGACATTTGACTGAAG+TGG + chr1_4:66787856-66787875 Msa0179280:exon 35.0%
CAATCCTGATCAAATGGTAA+TGG - chr1_4:66788174-66788193 None:intergenic 35.0%
CATTACCATTTGATCAGGAT+TGG + chr1_4:66788172-66788191 Msa0179280:three_prime_UTR 35.0%
GAGAGACAACATTGTGATTA+TGG + chr1_4:66788212-66788231 Msa0179280:three_prime_UTR 35.0%
TAAATGCTAACACATGACTC+AGG - chr1_4:66788337-66788356 None:intergenic 35.0%
CCTTCTTGATTGCAAAGTGT+TGG - chr1_4:66784298-66784317 None:intergenic 40.0%
CCAACACTTTGCAATCAAGA+AGG + chr1_4:66784295-66784314 Msa0179280:CDS 40.0%
TGCAGTGTTAAAGATAGGCA+TGG + chr1_4:66784585-66784604 Msa0179280:intron 40.0%
ATTGAAGATGCCGAGAGTAA+AGG + chr1_4:66784729-66784748 Msa0179280:CDS 40.0%
TGTAATGAGGCCTTTACTCT+CGG - chr1_4:66784742-66784761 None:intergenic 40.0%
TTACCTTTCCAGGTGTAATG+AGG - chr1_4:66784755-66784774 None:intergenic 40.0%
! GTTTTCAAACTGGGCTTGTA+AGG + chr1_4:66784796-66784815 Msa0179280:intron 40.0%
AAACTGGGCTTGTAAGGTTA+GGG + chr1_4:66784802-66784821 Msa0179280:intron 40.0%
CTTTCAAGACTCACATAAGC+TGG - chr1_4:66785252-66785271 None:intergenic 40.0%
AGGGTCTGTCAAATATACCT+CGG - chr1_4:66785301-66785320 None:intergenic 40.0%
TGAAAACTCTGCCAATCCAA+AGG + chr1_4:66785401-66785420 Msa0179280:intron 40.0%
TAGATTCATTACGAGACCAC+TGG + chr1_4:66785502-66785521 Msa0179280:intron 40.0%
CAGAGTCTTTCCAAATCTCA+GGG - chr1_4:66785528-66785547 None:intergenic 40.0%
AGATTTGGAAAGACTCTGGA+GGG + chr1_4:66785530-66785549 Msa0179280:CDS 40.0%
! TCTCTGGGTTTTTATCCTTG+AGG - chr1_4:66785618-66785637 None:intergenic 40.0%
GGATAAAAACCCAGAGATCA+AGG + chr1_4:66785621-66785640 Msa0179280:CDS 40.0%
!!! TAATGTTGCTTTTCCCCTCT+AGG + chr1_4:66785696-66785715 Msa0179280:intron 40.0%
TTCTACACCATACACCTAGA+GGG - chr1_4:66785713-66785732 None:intergenic 40.0%
TTCAGAACTGCACTTTCAGA+TGG - chr1_4:66785736-66785755 None:intergenic 40.0%
!! TCTGAAAGTGCAGTTCTGAA+TGG + chr1_4:66785736-66785755 Msa0179280:CDS 40.0%
AATGTGATGAACGAGAGAGT+TGG + chr1_4:66785935-66785954 Msa0179280:intron 40.0%
GTTGTATGTCTATGTAGGAG+AGG + chr1_4:66785974-66785993 Msa0179280:intron 40.0%
TGTATGTCTATGTAGGAGAG+GGG + chr1_4:66785976-66785995 Msa0179280:intron 40.0%
! TTAGACATCTGCAGGTGTTT+TGG + chr1_4:66786263-66786282 Msa0179280:intron 40.0%
AGACAAGTCAGCAATCTAAC+AGG - chr1_4:66786302-66786321 None:intergenic 40.0%
CTAAGTCAATGACAACCCAA+AGG - chr1_4:66786355-66786374 None:intergenic 40.0%
AATCAGTTAACGGCCTCAAA+TGG - chr1_4:66786484-66786503 None:intergenic 40.0%
AAAGGCAAACACCTAATCCA+AGG + chr1_4:66786528-66786547 Msa0179280:intron 40.0%
AAGGCAAACACCTAATCCAA+GGG + chr1_4:66786529-66786548 Msa0179280:intron 40.0%
AAACACCTAATCCAAGGGAT+CGG + chr1_4:66786534-66786553 Msa0179280:CDS 40.0%
TAGATCAACTTCCAGGATAG+GGG - chr1_4:66786574-66786593 None:intergenic 40.0%
GTAGATCAACTTCCAGGATA+GGG - chr1_4:66786575-66786594 None:intergenic 40.0%
AGTAGATCAACTTCCAGGAT+AGG - chr1_4:66786576-66786595 None:intergenic 40.0%
CATCTAGTAGATCAACTTCC+AGG - chr1_4:66786581-66786600 None:intergenic 40.0%
TGCCTTGAAAGAAGGTTTAC+TGG + chr1_4:66786946-66786965 Msa0179280:intron 40.0%
!! TTTCTGAGGAGCTTTTGCTA+CGG - chr1_4:66787285-66787304 None:intergenic 40.0%
TGAGAGGAACGTGATTATAG+GGG - chr1_4:66787392-66787411 None:intergenic 40.0%
GTGAGAGGAACGTGATTATA+GGG - chr1_4:66787393-66787412 None:intergenic 40.0%
TGTGAGAGGAACGTGATTAT+AGG - chr1_4:66787394-66787413 None:intergenic 40.0%
ATGTGGCAGTTAATTGTGAG+AGG - chr1_4:66787408-66787427 None:intergenic 40.0%
! GTTTGTTAGGACACAGGTTT+GGG - chr1_4:66787486-66787505 None:intergenic 40.0%
!! AGTTTGTTAGGACACAGGTT+TGG - chr1_4:66787487-66787506 None:intergenic 40.0%
TTGCAGATGGGAATTTCATC+AGG + chr1_4:66787551-66787570 Msa0179280:intron 40.0%
! ATGAGCTTTCCTGCATTTTC+TGG - chr1_4:66787614-66787633 None:intergenic 40.0%
! CAGGTGATTTTTCCCAGTTT+TGG + chr1_4:66787781-66787800 Msa0179280:intron 40.0%
! AAGTATCGCTCTCCAAAACT+GGG - chr1_4:66787796-66787815 None:intergenic 40.0%
!! TGCCTGATGGATTCAAAAAG+CGG - chr1_4:66787826-66787845 None:intergenic 40.0%
TTTCTCCATTCACACGAGTA+AGG + chr1_4:66788138-66788157 Msa0179280:three_prime_UTR 40.0%
TTGATCCTTACTCGTGTGAA+TGG - chr1_4:66788146-66788165 None:intergenic 40.0%
TTCACACGAGTAAGGATCAA+AGG + chr1_4:66788146-66788165 Msa0179280:three_prime_UTR 40.0%
GGAACCATTACCATTTGATC+AGG + chr1_4:66788167-66788186 Msa0179280:three_prime_UTR 40.0%
TAGGTCCAATCCTGATCAAA+TGG - chr1_4:66788180-66788199 None:intergenic 40.0%
!! ATTGAGGGTATGGGGTTTTT+AGG + chr1_4:66788289-66788308 Msa0179280:three_prime_UTR 40.0%
!! TTGAGGGTATGGGGTTTTTA+GGG + chr1_4:66788290-66788309 Msa0179280:three_prime_UTR 40.0%
CCTATCTTTAACACTGCAGC+AGG - chr1_4:66784583-66784602 None:intergenic 45.0%
CCTGCTGCAGTGTTAAAGAT+AGG + chr1_4:66784580-66784599 Msa0179280:intron 45.0%
AGTAAAGGCCTCATTACACC+TGG + chr1_4:66784744-66784763 Msa0179280:CDS 45.0%
CAAACTGGGCTTGTAAGGTT+AGG + chr1_4:66784801-66784820 Msa0179280:intron 45.0%
AACTGGGCTTGTAAGGTTAG+GGG + chr1_4:66784803-66784822 Msa0179280:intron 45.0%
GTTCTTGTTGAGCCAACAAG+TGG + chr1_4:66785162-66785181 Msa0179280:intron 45.0%
TATTTGACAGACCCTGCCAA+AGG + chr1_4:66785306-66785325 Msa0179280:intron 45.0%
CACCATCAATTCCTTTGGCA+GGG - chr1_4:66785320-66785339 None:intergenic 45.0%
ACACCATCAATTCCTTTGGC+AGG - chr1_4:66785321-66785340 None:intergenic 45.0%
CCAGAGTCTTTCCAAATCTC+AGG - chr1_4:66785529-66785548 None:intergenic 45.0%
CCTGAGATTTGGAAAGACTC+TGG + chr1_4:66785526-66785545 Msa0179280:CDS 45.0%
GAGATTTGGAAAGACTCTGG+AGG + chr1_4:66785529-66785548 Msa0179280:CDS 45.0%
!! AGAGTTGATGCTTTGGTTGC+AGG + chr1_4:66785553-66785572 Msa0179280:CDS 45.0%
!! GAGTTGATGCTTTGGTTGCA+GGG + chr1_4:66785554-66785573 Msa0179280:CDS 45.0%
TCTACACCATACACCTAGAG+GGG - chr1_4:66785712-66785731 None:intergenic 45.0%
GTTCTACACCATACACCTAG+AGG - chr1_4:66785714-66785733 None:intergenic 45.0%
!! GAAAGTGCAGTTCTGAATGG+AGG + chr1_4:66785739-66785758 Msa0179280:CDS 45.0%
!! GATTTTGGAGGGGAGAGTTT+TGG - chr1_4:66786117-66786136 None:intergenic 45.0%
CAGCACTATTAGACATCTGC+AGG + chr1_4:66786255-66786274 Msa0179280:intron 45.0%
AAAAGCTGCACTTAGCCCTT+TGG + chr1_4:66786336-66786355 Msa0179280:intron 45.0%
AAAGCTGCACTTAGCCCTTT+GGG + chr1_4:66786337-66786356 Msa0179280:intron 45.0%
AGATCAACTTCCAGGATAGG+GGG - chr1_4:66786573-66786592 None:intergenic 45.0%
AAGCTGCTTGCCTTGAAAGA+AGG + chr1_4:66786938-66786957 Msa0179280:intron 45.0%
! TTTTGCTACGGGGTTACAGT+GGG - chr1_4:66787273-66787292 None:intergenic 45.0%
!! TTCTGAGGAGCTTTTGCTAC+GGG - chr1_4:66787284-66787303 None:intergenic 45.0%
GAGAGGAACGTGATTATAGG+GGG - chr1_4:66787391-66787410 None:intergenic 45.0%
! TAGGACACAGGTTTGGGTTA+GGG - chr1_4:66787480-66787499 None:intergenic 45.0%
! TTAGGACACAGGTTTGGGTT+AGG - chr1_4:66787481-66787500 None:intergenic 45.0%
CTTCTGAATCGTTGTTGTGC+AGG + chr1_4:66787762-66787781 Msa0179280:intron 45.0%
! CAAGTATCGCTCTCCAAAAC+TGG - chr1_4:66787797-66787816 None:intergenic 45.0%
!!! CACCGCTTTTTGAATCCATC+AGG + chr1_4:66787821-66787840 Msa0179280:CDS 45.0%
TTGTTCAGCTTCATGCCTGA+TGG - chr1_4:66787839-66787858 None:intergenic 45.0%
CACAATTGTGACAGTAGAGC+TGG - chr1_4:66787914-66787933 None:intergenic 45.0%
CAGCTCTACTGTCACAATTG+TGG + chr1_4:66787912-66787931 Msa0179280:three_prime_UTR 45.0%
ATTGGACCTAGATTGACAGC+TGG + chr1_4:66788190-66788209 Msa0179280:three_prime_UTR 45.0%
TGATGTACCTGCAAACACTC+CGG + chr1_4:66788259-66788278 Msa0179280:three_prime_UTR 45.0%
CATACCCTCAATCACATCTC+CGG - chr1_4:66788281-66788300 None:intergenic 45.0%
! GGAGATGTGATTGAGGGTAT+GGG + chr1_4:66788280-66788299 Msa0179280:three_prime_UTR 45.0%
! GAGATGTGATTGAGGGTATG+GGG + chr1_4:66788281-66788300 Msa0179280:three_prime_UTR 45.0%
GCATTTATAGGATGGCGACT+AGG + chr1_4:66788350-66788369 Msa0179280:three_prime_UTR 45.0%
!!! TTATTATTTTTTTTTTTTGA+AGG + chr1_4:66787057-66787076 Msa0179280:intron 5.0%
AGGCCTCATTACACCTGGAA+AGG + chr1_4:66784749-66784768 Msa0179280:CDS 50.0%
GAGCCAACAAGTGGTAACAC+CGG + chr1_4:66785171-66785190 Msa0179280:intron 50.0%
!! ATGCCGGTGTTACCACTTGT+TGG - chr1_4:66785177-66785196 None:intergenic 50.0%
ACAAGTGGTAACACCGGCAT+AGG + chr1_4:66785177-66785196 Msa0179280:intron 50.0%
TGGTAACACCGGCATAGGAT+TGG + chr1_4:66785182-66785201 Msa0179280:intron 50.0%
TATCGACGCCAATCCTATGC+CGG - chr1_4:66785193-66785212 None:intergenic 50.0%
GACCCTGCCAAAGGAATTGA+TGG + chr1_4:66785315-66785334 Msa0179280:intron 50.0%
TTTCCAAATCTCAGGGCCAG+TGG - chr1_4:66785521-66785540 None:intergenic 50.0%
!! TGGAGGGAGAGTTGATGCTT+TGG + chr1_4:66785546-66785565 Msa0179280:CDS 50.0%
GATGCTTTGGTTGCAGGGAT+AGG + chr1_4:66785559-66785578 Msa0179280:CDS 50.0%
TTGGTTGCAGGGATAGGAAC+TGG + chr1_4:66785565-66785584 Msa0179280:CDS 50.0%
TGGTTGCAGGGATAGGAACT+GGG + chr1_4:66785566-66785585 Msa0179280:CDS 50.0%
GGGGAACAGTAACAGGTGTT+GGG + chr1_4:66785587-66785606 Msa0179280:CDS 50.0%
!! AGGTGTTGGGAAGTTCCTCA+AGG + chr1_4:66785600-66785619 Msa0179280:CDS 50.0%
! GCTTTTCCCCTCTAGGTGTA+TGG + chr1_4:66785703-66785722 Msa0179280:intron 50.0%
! GTTCTGAATGGAGGAAAGCC+AGG + chr1_4:66785748-66785767 Msa0179280:CDS 50.0%
!!! TCTGCAGGTGTTTTGGCATC+TGG + chr1_4:66786270-66786289 Msa0179280:intron 50.0%
TTTGCTACGGGGTTACAGTG+GGG - chr1_4:66787272-66787291 None:intergenic 50.0%
! CTTTTGCTACGGGGTTACAG+TGG - chr1_4:66787274-66787293 None:intergenic 50.0%
! TCTGAGGAGCTTTTGCTACG+GGG - chr1_4:66787283-66787302 None:intergenic 50.0%
GGAACGTGATTATAGGGGGA+AGG - chr1_4:66787387-66787406 None:intergenic 50.0%
ATGGGCTTGACAGCGAAGTT+AGG - chr1_4:66787443-66787462 None:intergenic 50.0%
TCGCTGTCAAGCCCATTTGT+TGG + chr1_4:66787447-66787466 Msa0179280:intron 50.0%
CGCTGTCAAGCCCATTTGTT+GGG + chr1_4:66787448-66787467 Msa0179280:intron 50.0%
! CAAGCCCATTTGTTGGGCTT+AGG + chr1_4:66787454-66787473 Msa0179280:intron 50.0%
AGGGCCTAAGCCCAACAAAT+GGG - chr1_4:66787461-66787480 None:intergenic 50.0%
TAGGGCCTAAGCCCAACAAA+TGG - chr1_4:66787462-66787481 None:intergenic 50.0%
GGGAAGAGACCAGAAAATGC+AGG + chr1_4:66787602-66787621 Msa0179280:CDS 50.0%
GTCTCTCCAGCTGTCAATCT+AGG - chr1_4:66788199-66788218 None:intergenic 50.0%
GATTGTGGCAGCTCCATAGA+GGG + chr1_4:66788234-66788253 Msa0179280:three_prime_UTR 50.0%
CAGGTACATCACTCCCTCTA+TGG - chr1_4:66788250-66788269 None:intergenic 50.0%
ACACTCCGGAGATGTGATTG+AGG + chr1_4:66788273-66788292 Msa0179280:three_prime_UTR 50.0%
CACTCCGGAGATGTGATTGA+GGG + chr1_4:66788274-66788293 Msa0179280:three_prime_UTR 50.0%
CGGAGATGTGATTGAGGGTA+TGG + chr1_4:66788279-66788298 Msa0179280:three_prime_UTR 50.0%
ATGGCGACTAGGCTTTCCTT+AGG + chr1_4:66788361-66788380 Msa0179280:three_prime_UTR 50.0%
TGGCGACTAGGCTTTCCTTA+GGG + chr1_4:66788362-66788381 Msa0179280:three_prime_UTR 50.0%
!! TGGCGTCGATAGCAGCAATG+AGG + chr1_4:66785202-66785221 Msa0179280:intron 55.0%
!! GGCGTCGATAGCAGCAATGA+GGG + chr1_4:66785203-66785222 Msa0179280:intron 55.0%
! GCGTCGATAGCAGCAATGAG+GGG + chr1_4:66785204-66785223 Msa0179280:intron 55.0%
AGACCACTGGCCCTGAGATT+TGG + chr1_4:66785515-66785534 Msa0179280:CDS 55.0%
GGTTGCAGGGATAGGAACTG+GGG + chr1_4:66785567-66785586 Msa0179280:CDS 55.0%
GTTGCAGGGATAGGAACTGG+GGG + chr1_4:66785568-66785587 Msa0179280:CDS 55.0%
GGAACTGGGGGAACAGTAAC+AGG + chr1_4:66785580-66785599 Msa0179280:CDS 55.0%
GGGGGAACAGTAACAGGTGT+TGG + chr1_4:66785586-66785605 Msa0179280:CDS 55.0%
!! CAGCACCGATCCCTTGGATT+AGG - chr1_4:66786542-66786561 None:intergenic 55.0%
CTAATCCAAGGGATCGGTGC+TGG + chr1_4:66786540-66786559 Msa0179280:CDS 55.0%
GGATTGTGGCAGCTCCATAG+AGG + chr1_4:66788233-66788252 Msa0179280:three_prime_UTR 55.0%
! CACATCTCCGGAGTGTTTGC+AGG - chr1_4:66788269-66788288 None:intergenic 55.0%
!! TGGTGTCGTTCCCCCTATCC+TGG + chr1_4:66786560-66786579 Msa0179280:CDS 60.0%
ACTGCGAGCTTTCGGAGCCG+AGG + chr1_4:66785281-66785300 Msa0179280:intron 65.0%
!! CGACACCAGCACCGATCCCT+TGG - chr1_4:66786548-66786567 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 66784240 66788392 66784240 ID=Msa0179280;Name=Msa0179280
chr1_4 mRNA 66784240 66788392 66784240 ID=Msa0179280-mRNA-1;Parent=Msa0179280;Name=Msa0179280-mRNA-1;_AED=0.40;_eAED=0.40;_QI=0|0.66|0.85|1|1|1|7|519|195
chr1_4 exon 66784240 66784328 66784240 ID=Msa0179280-mRNA-1:exon:21953;Parent=Msa0179280-mRNA-1
chr1_4 exon 66784713 66784770 66784713 ID=Msa0179280-mRNA-1:exon:21954;Parent=Msa0179280-mRNA-1
chr1_4 exon 66785505 66785642 66785505 ID=Msa0179280-mRNA-1:exon:21955;Parent=Msa0179280-mRNA-1
chr1_4 exon 66785718 66785769 66785718 ID=Msa0179280-mRNA-1:exon:21956;Parent=Msa0179280-mRNA-1
chr1_4 exon 66786532 66786611 66786532 ID=Msa0179280-mRNA-1:exon:21957;Parent=Msa0179280-mRNA-1
chr1_4 exon 66787557 66787637 66787557 ID=Msa0179280-mRNA-1:exon:21958;Parent=Msa0179280-mRNA-1
chr1_4 exon 66787784 66788392 66787784 ID=Msa0179280-mRNA-1:exon:21959;Parent=Msa0179280-mRNA-1
chr1_4 CDS 66784240 66784328 66784240 ID=Msa0179280-mRNA-1:cds;Parent=Msa0179280-mRNA-1
chr1_4 CDS 66784713 66784770 66784713 ID=Msa0179280-mRNA-1:cds;Parent=Msa0179280-mRNA-1
chr1_4 CDS 66785505 66785642 66785505 ID=Msa0179280-mRNA-1:cds;Parent=Msa0179280-mRNA-1
chr1_4 CDS 66785718 66785769 66785718 ID=Msa0179280-mRNA-1:cds;Parent=Msa0179280-mRNA-1
chr1_4 CDS 66786532 66786611 66786532 ID=Msa0179280-mRNA-1:cds;Parent=Msa0179280-mRNA-1
chr1_4 CDS 66787557 66787637 66787557 ID=Msa0179280-mRNA-1:cds;Parent=Msa0179280-mRNA-1
chr1_4 CDS 66787784 66787873 66787784 ID=Msa0179280-mRNA-1:cds;Parent=Msa0179280-mRNA-1
chr1_4 three_prime_UTR 66787874 66788392 66787874 ID=Msa0179280-mRNA-1:three_prime_utr;Parent=Msa0179280-mRNA-1
Gene Sequence

>Msa0179280

TTGAGCTTTTCTGTTTTGAAAGATTTTGCAGGCTTTCTTCATCAGATAACATGGACCAACACTTTGCAATCAAGAAGGATGTCACTCAAGATATCGTTGAGCATGATTGAAGATGCCGAGAGTAAAGGCCTCATTACACCTGGAAAGATTCATTACGAGACCACTGGCCCTGAGATTTGGAAAGACTCTGGAGGGAGAGTTGATGCTTTGGTTGCAGGGATAGGAACTGGGGGAACAGTAACAGGTGTTGGGAAGTTCCTCAAGGATAAAAACCCAGAGATCAAGGTGTATGGTGTAGAACCATCTGAAAGTGCAGTTCTGAATGGAGGAAAGCCAGGCAAACACCTAATCCAAGGGATCGGTGCTGGTGTCGTTCCCCCTATCCTGGAAGTTGATCTACTAGATGAAGTTATTCAGATGGGAATTTCATCAGGTGCTGCAACAGCAGCTGCAATAAAATTAGGGAAGAGACCAGAAAATGCAGGAAAGCTCATTGTTGTGATTTTTCCCAGTTTTGGAGAGCGATACTTGTCTTCACCGCTTTTTGAATCCATCAGGCATGAAGCTGAACAAATGACATTTGACTGA
Protein sequence

>Msa0179280

LSFSVLKDFAGFLHQITWTNTLQSRRMSLKISLSMIEDAESKGLITPGKIHYETTGPEIWKDSGGRVDALVAGIGTGGTVTGVGKFLKDKNPEIKVYGVEPSESAVLNGGKPGKHLIQGIGAGVVPPILEVDLLDEVIQMGISSGAATAAAIKLGKRPENAGKLIVVIFPSFGERYLSSPLFESIRHEAEQMTFD*